Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,791,507 |
T→C |
intergenic (‑182/‑107) |
htrL ← / → rfaD |
HtrL/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,791,507 | 0 | T | C | 100.0%
| 566.6
/ NA
| 177 | intergenic (‑182/‑107) | htrL/rfaD | HtrL/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (162/15); total (162/15) |
Only 100 of 181 total aligned reads displayed.
AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATA > NC_000913/3791417‑3791596
|
atatTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCt > 1:3223879/1‑93 (MQ=255)
atatTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCt > 1:1695662/1‑93 (MQ=255)
atTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTg > 1:2310048/1‑93 (MQ=255)
ttGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGc > 1:2130485/1‑93 (MQ=255)
ttGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGc < 1:4300049/93‑1 (MQ=255)
ttGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTCCATTTAGAACCCTTGc > 1:3181394/1‑93 (MQ=255)
tGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCAGCCTTGCa > 2:4454100/1‑93 (MQ=255)
aTACTAAAGCACTATTCACGTGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCAcc > 2:4585153/1‑93 (MQ=255)
aTACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCAcc < 1:3007865/93‑1 (MQ=255)
tACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACTCTTGCACct > 1:1157361/1‑93 (MQ=255)
tAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTa < 2:2783619/93‑1 (MQ=255)
tAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTa > 1:1213299/1‑93 (MQ=255)
aGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGt > 2:2763779/1‑93 (MQ=255)
cACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTaa > 2:2301505/1‑93 (MQ=255)
cACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTaa > 2:656607/1‑93 (MQ=255)
aCTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTaaa > 2:4035126/1‑93 (MQ=255)
cTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAg > 1:4502439/1‑93 (MQ=255)
cTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAg > 2:935148/1‑93 (MQ=255)
tATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAgg > 1:3908238/1‑93 (MQ=255)
aTTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAggg > 1:96906/1‑93 (MQ=255)
ttCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGc > 1:548219/1‑93 (MQ=255)
tCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCt > 2:2103954/1‑93 (MQ=255)
caTGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGaa > 1:393024/1‑93 (MQ=255)
aaaCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGAtt > 1:1928126/1‑93 (MQ=255)
aaCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTc > 2:3262281/1‑93 (MQ=255)
aaCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTc > 2:2882197/1‑93 (MQ=255)
aaCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTc > 1:3232532/1‑93 (MQ=255)
aCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCg < 1:1253021/93‑1 (MQ=255)
cAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGa > 2:2569141/1‑93 (MQ=255)
cAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGa > 1:2226370/1‑93 (MQ=255)
aaCATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGAt > 2:3730409/1‑93 (MQ=255)
aCATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGAtg > 1:3483649/1‑93 (MQ=255)
aCATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGAtg > 1:3394443/1‑93 (MQ=255)
aTCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGAtgtg > 2:1520972/1‑93 (MQ=255)
tCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGa > 1:1774005/1‑93 (MQ=255)
tCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGa > 1:1101866/1‑93 (MQ=255)
tCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGa > 2:3531137/1‑93 (MQ=255)
tCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGa > 2:3954640/1‑93 (MQ=255)
ccGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGAt > 1:1946390/1‑93 (MQ=255)
gCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATgg > 2:1981589/1‑93 (MQ=255)
ccATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGt > 2:3162339/1‑93 (MQ=255)
ccATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGt > 1:2599545/1‑93 (MQ=255)
ccATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATCAGCACCCTTGCACCTCTATCTAAAGGGCTGAAGGGATTCGGATGTGATggg > 1:1542526/1‑92 (MQ=255)
cATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTa > 1:3922036/1‑93 (MQ=255)
aTGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTAt > 2:3395997/1‑93 (MQ=255)
tGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATg > 1:4466262/1‑93 (MQ=255)
tGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATg > 1:1722803/1‑93 (MQ=255)
tGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATg > 1:504638/1‑93 (MQ=255)
aaGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAt > 1:2116533/1‑93 (MQ=255)
aGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAtt > 2:4335471/1‑93 (MQ=255)
aGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAtt > 2:1284663/1‑93 (MQ=255)
gACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTAc > 2:20186/1‑93 (MQ=255)
cTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAg > 2:3269455/1‑93 (MQ=255)
aGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGAc > 2:3757324/1‑93 (MQ=255)
gCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCGTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACa > 1:3376313/1‑93 (MQ=255)
tAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACAtt > 1:4394029/1‑93 (MQ=255)
tAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACAtt > 1:4636805/1‑93 (MQ=255)
aaaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTc < 1:3847923/93‑1 (MQ=255)
aaaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTc > 1:4545689/1‑93 (MQ=255)
aaaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTc > 2:2129070/1‑93 (MQ=255)
aaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCg > 2:134537/1‑93 (MQ=255)
aaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCg > 1:1361684/1‑93 (MQ=255)
aaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgt > 2:4446086/1‑93 (MQ=255)
cccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt < 2:1450540/93‑1 (MQ=255)
cccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt > 1:3746153/1‑93 (MQ=255)
cccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt > 2:1743104/1‑93 (MQ=255)
ccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTc > 2:457252/1‑93 (MQ=255)
ccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTc > 2:2929869/1‑93 (MQ=255)
cAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCt > 2:4024847/1‑93 (MQ=255)
cAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCt > 2:3627244/1‑93 (MQ=255)
aaaCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTg > 1:1558830/1‑93 (MQ=255)
aaCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTga > 2:1645075/1‑93 (MQ=255)
aaCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTga > 2:3873704/1‑93 (MQ=255)
aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag > 1:707889/1‑93 (MQ=255)
aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag > 1:3253524/1‑93 (MQ=255)
aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag > 1:2902957/1‑93 (MQ=255)
aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag > 1:4417960/1‑93 (MQ=255)
aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag < 1:4000942/93‑1 (MQ=255)
cTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgaga < 2:136922/93‑1 (MQ=255)
tAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGAt > 2:736148/1‑93 (MQ=255)
gTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCAGAAGGGTTTCGGATGGGAGGGTATGATGATAGACATTCGTGTCTGAGAtag > 2:4685625/1‑91 (MQ=255)
tttGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGt > 1:2628309/1‑93 (MQ=255)
tttttgCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGtc < 1:3560937/90‑1 (MQ=255)
tgttgCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGtct > 2:213317/1‑93 (MQ=255)
tgCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTg > 2:848335/1‑93 (MQ=255)
aaTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACt > 2:327832/1‑93 (MQ=255)
aaTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACt > 2:4046605/1‑93 (MQ=255)
aaTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACt > 2:2055724/1‑93 (MQ=255)
aTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTGTGACTc > 2:2479531/1‑93 (MQ=255)
aTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTc > 2:1394182/1‑93 (MQ=255)
aTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTc > 1:465792/1‑93 (MQ=255)
ttAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTcc > 1:4227892/1‑93 (MQ=255)
tAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCa < 2:2122587/93‑1 (MQ=255)
tAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCa < 2:1159296/93‑1 (MQ=255)
aGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCAt > 1:941016/1‑93 (MQ=255)
aGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCAt > 2:4272905/1‑93 (MQ=255)
gCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATa > 2:441078/1‑93 (MQ=255)
gCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATa > 2:1662800/1‑93 (MQ=255)
gCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATa > 2:3293454/1‑93 (MQ=255)
gCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGGCTGAGATTGTCTCTGACTCCATa > 2:523945/1‑93 (MQ=255)
|
AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATA > NC_000913/3791417‑3791596
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTC > NC_000913/3791417‑3791600
|
AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCT > SRR4302535.3246228/1‑94 (MQ=60)
AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCT > SRR4302535.392229/1‑94 (MQ=60)
AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCT > SRR4302535.1707919/1‑94 (MQ=60)
TATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTG > SRR4302535.2326582/1‑94 (MQ=60)
ATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGC > SRR4302535.2145844/1‑94 (MQ=60)
ATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTCCATTTAGAACCCTTGC > SRR4302535.3203382/1‑94 (MQ=60)
TTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCA < SRR4302535.4329475/94‑1 (MQ=60)
ATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACTCTTGCACCT > SRR4302535.1165637/1‑94 (MQ=60)
ATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCT > SRR4302535.2618256/1‑94 (MQ=60)
ATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCT < SRR4302535.3028934/94‑1 (MQ=60)
ATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCT > SRR4302535.41716/1‑94 (MQ=60)
ACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCT > SRR4302535.2976510/1‑94 (MQ=60)
CTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTA > SRR4302535.1222003/1‑94 (MQ=60)
AAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATG > SRR4302535.1167026/1‑94 (MQ=60)
AGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTA > SRR4302535.1235143/1‑94 (MQ=60)
CACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAA > SRR4302535.3998571/1‑94 (MQ=60)
ACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAG > SRR4302535.4533357/1‑94 (MQ=60)
CTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGG > SRR4302535.697354/1‑94 (MQ=60)
CTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGG > SRR4302535.1371203/1‑94 (MQ=60)
CTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGG > SRR4302535.3935009/1‑94 (MQ=60)
TATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGG > SRR4302535.97595/1‑94 (MQ=60)
ATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGC > SRR4302535.552047/1‑94 (MQ=60)
TTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCT > SRR4302535.960966/1‑94 (MQ=60)
TCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGNGCTG > SRR4302535.1107190/1‑94 (MQ=60)
CACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGA > SRR4302535.2081959/1‑94 (MQ=60)
ACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAA > SRR4302535.395762/1‑94 (MQ=60)
TGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGG > SRR4302535.3946568/1‑94 (MQ=60)
CAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGAT > SRR4302535.1669607/1‑94 (MQ=60)
CAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGAT > SRR4302535.522303/1‑94 (MQ=60)
AAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATT > SRR4302535.1942023/1‑94 (MQ=60)
AAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTC > SRR4302535.3254947/1‑94 (MQ=60)
AAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTC > SRR4302535.4677306/1‑94 (MQ=60)
ACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGG < SRR4302535.1261978/94‑1 (MQ=60)
CCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGA > SRR4302535.2242211/1‑94 (MQ=60)
AACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATG > SRR4302535.3507838/1‑94 (MQ=60)
AACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATG > SRR4302535.3418059/1‑94 (MQ=60)
ATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGA > SRR4302535.1109741/1‑94 (MQ=60)
ATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGA > SRR4302535.2721455/1‑94 (MQ=60)
ATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGA > SRR4302535.1786858/1‑94 (MQ=60)
TCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGAT > SRR4302535.1960400/1‑94 (MQ=60)
GCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGT > SRR4302535.2618207/1‑94 (MQ=60)
GCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATCAGCACCCTTGCACCTCTATCTAAAGGGCTGAAGGGATTCGGATGTGATGGG > SRR4302535.1553645/1‑94 (MQ=60)
CCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTA > SRR4302535.4459284/1‑94 (MQ=60)
CCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTA > SRR4302535.3948847/1‑94 (MQ=60)
ATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATG > SRR4302535.1735263/1‑94 (MQ=60)
ATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATG > SRR4302535.3622219/1‑94 (MQ=60)
ATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATG > SRR4302535.4496899/1‑94 (MQ=60)
ATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATG > SRR4302535.508165/1‑94 (MQ=60)
GAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAT > SRR4302535.2131804/1‑94 (MQ=60)
GAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAT > SRR4302535.2197048/1‑94 (MQ=60)
GAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGCGATGGTATGAT > SRR4302535.2131805/1‑94 (MQ=60)
GGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTAC > SRR4302535.1713211/1‑94 (MQ=60)
CTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGA > SRR4302535.872553/1‑94 (MQ=60)
TAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGAC > SRR4302535.344020/1‑94 (MQ=60)
AGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCGTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACA > SRR4302535.3399792/1‑94 (MQ=60)
AGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACA > SRR4302535.175595/1‑94 (MQ=60)
CTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATT > SRR4302535.4668258/1‑94 (MQ=60)
CTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATT > SRR4302535.4424096/1‑94 (MQ=60)
TAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTC > SRR4302535.4576773/1‑94 (MQ=60)
AAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCG > SRR4302535.1371423/1‑94 (MQ=60)
AAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCG < SRR4302535.3874408/94‑1 (MQ=60)
ACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGT > SRR4302535.2252001/1‑94 (MQ=60)
ACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGT > SRR4302535.3772071/1‑94 (MQ=60)
ACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGT > SRR4302535.3208369/1‑94 (MQ=60)
CCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTC > SRR4302535.4549740/1‑94 (MQ=60)
CCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTC > SRR4302535.3099879/1‑94 (MQ=60)
CAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTG > SRR4302535.1570070/1‑94 (MQ=60)
CAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTG > SRR4302535.1845378/1‑94 (MQ=60)
AAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGA > SRR4302535.4293329/1‑94 (MQ=60)
AAACTAGTTTGTCGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGA > SRR4302535.4346381/1‑94 (MQ=60)
AACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAG > SRR4302535.2923477/1‑94 (MQ=60)
AACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAG > SRR4302535.4448208/1‑94 (MQ=60)
AACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAG > SRR4302535.3409236/1‑94 (MQ=60)
AACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAG > SRR4302535.712856/1‑94 (MQ=60)
AACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAG > SRR4302535.3276128/1‑94 (MQ=60)
ACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGA < SRR4302535.4028312/94‑1 (MQ=60)
GTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGT > SRR4302535.2647142/1‑94 (MQ=60)
TTTTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCT < SRR4302535.3585628/94‑1 (MQ=60)
TGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTC > SRR4302535.3272660/1‑94 (MQ=60)
GTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCT > SRR4302535.1409817/1‑94 (MQ=60)
GTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCT > SRR4302535.4666324/1‑94 (MQ=60)
GTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCT > SRR4302535.3307130/1‑94 (MQ=60)
TGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGA > SRR4302535.3874164/1‑94 (MQ=60)
CAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACT > SRR4302535.4516461/1‑94 (MQ=60)
AATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTC > SRR4302535.469051/1‑94 (MQ=60)
ATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCC > SRR4302535.4256826/1‑94 (MQ=60)
TAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCAT > SRR4302535.947677/1‑94 (MQ=60)
GCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAA > SRR4302535.2708603/1‑94 (MQ=60)
GCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAA > SRR4302535.104920/1‑94 (MQ=60)
CACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAAT > SRR4302535.2623064/1‑94 (MQ=60)
CACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAAT > SRR4302535.108012/1‑94 (MQ=60)
ACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATT > SRR4302535.2954934/1‑94 (MQ=60)
ACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATT > SRR4302535.4717176/1‑94 (MQ=60)
ACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATT > SRR4302535.1898369/1‑94 (MQ=60)
CCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTC > SRR4302535.3197216/1‑94 (MQ=60)
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AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATAATTC > NC_000913/3791417‑3791600
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
