Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	752,007	T→C	G4G (GGA→GGG)	ybgD ←	putative fimbrial‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	752,007	0	T	C	99.5%	1230.5 / NA	378	G4G (GGA→GGG)	ybgD	putative fimbrial‑like protein
Reads supporting (aligned to +/- strand): ref base T (0/1); major base C (146/229); minor base A (2/0); total (148/230)
Fisher's exact test for biased strand distribution p-value = 1.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 386 total aligned reads displayed.

CCTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTT  >  NC_000913/751916‑752096

ccTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTc                                                                                          >  1:6722405/1‑93 (MQ=255)

   tAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCtt                                                                                       <  2:6755647/93‑1 (MQ=255)

      aGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTaa                                                                                    <  1:2628274/93‑1 (MQ=255)

      aGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTaa                                                                                    >  1:7854515/1‑93 (MQ=255)

        tGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTaaaa                                                                                  >  1:3758332/1‑92 (MQ=255)

        tGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAc                                                                                  <  1:946079/93‑1 (MQ=255)

            tttCGCTAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATaa                                                                              <  2:4886254/93‑1 (MQ=255)

            tttCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATaa                                                                              <  2:5368043/93‑1 (MQ=255)

            attCGCCAAAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATaa                                                                              <  2:8460517/92‑1 (MQ=255)

             ttCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAAc                                                                             <  1:2246590/93‑1 (MQ=255)

              tCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATATTTTTTGCCCTTTAAACATAACa                                                                            <  1:5881329/93‑1 (MQ=255)

               cGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACag                                                                           <  1:4674999/93‑1 (MQ=255)

                gCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACaga                                                                          >  2:7793705/1‑93 (MQ=255)

                gCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACaga                                                                          <  1:838125/93‑1 (MQ=255)

                 ccAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACagag                                                                         <  1:301641/93‑1 (MQ=255)

                 ccAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACagag                                                                         >  2:9843597/1‑93 (MQ=255)

                  cAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGt                                                                        >  1:5324900/1‑93 (MQ=255)

                   aGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAATCATAACAGAGTc                                                                       >  2:10032384/1‑93 (MQ=255)

                    gAACCTTCATCAGAAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTcc                                                                      <  1:8960844/93‑1 (MQ=255)

                     aaCCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCt                                                                     <  1:1692706/93‑1 (MQ=255)

                      aCCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCtt                                                                    <  1:886421/93‑1 (MQ=255)

                      aCCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCtt                                                                    <  2:6903717/93‑1 (MQ=255)

                       ccTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCttt                                                                   >  1:1488946/1‑93 (MQ=255)

                        cTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTa                                                                  >  1:7293667/1‑93 (MQ=255)

                         ttCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTaa                                                                 <  1:8030587/93‑1 (MQ=255)

                         ttCATCAGCACCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTaa                                                                 >  2:834053/1‑93 (MQ=255)

                          tcatcaGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTCAACATCACAGAGTCCTTTCAg                                                                >  1:9669958/1‑93 (MQ=255)

                          tcatcaGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAg                                                                >  1:9121618/1‑93 (MQ=255)

                            atcaGCAGCATAAACAGGTGCAGTGAGCAGAAGAGATACGGCCAGTGCGGCTAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGa                                                              <  2:1681164/93‑1 (MQ=255)

                             tcaGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACTGCCAGTGCGGCCAATGTTTTTTGACCTTTAAANATAACAGAGTCCTNTAAGGat                                                             >  1:6372759/1‑93 (MQ=255)

                              cagcagCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGata                                                            <  2:3828154/93‑1 (MQ=255)

                               agcagcATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGatat                                                           <  2:2814499/93‑1 (MQ=255)

                                gcagcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAtata                                                          <  2:9238539/93‑1 (MQ=255)

                                gcagcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAtata                                                          <  1:2016788/93‑1 (MQ=255)

                                gcagcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAtata                                                          <  1:7791592/93‑1 (MQ=255)

                                gcagcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAtata                                                          <  2:5932578/93‑1 (MQ=255)

                                gcagcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAtata                                                          <  1:6075369/93‑1 (MQ=255)

                                  agcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTCCTTTAAACATAACAGAGTCCTTTAAGGATATAGa                                                        <  1:8516674/93‑1 (MQ=255)

                                  agcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGa                                                        <  2:3596223/93‑1 (MQ=255)

                                  agcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGa                                                        <  2:2974265/93‑1 (MQ=255)

                                   gcaTAAACAGGTGCAGTGAACGGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGaa                                                       >  2:6448396/1‑93 (MQ=255)

                                   gcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGaa                                                       <  2:2153729/93‑1 (MQ=255)

                                   gcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGaa                                                       <  2:7551924/93‑1 (MQ=255)

                                     aTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATa                                                     <  2:4489452/93‑1 (MQ=255)

                                     aTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATa                                                     <  1:1034468/93‑1 (MQ=255)

                                      tAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAg                                                    >  1:5226706/1‑93 (MQ=255)

                                          cAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGt                                                <  1:3225568/93‑1 (MQ=255)

                                          cAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAATCCTTTAAGGATATAGAATAGGGGt                                                >  2:2517299/1‑93 (MQ=255)

                                           agttGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAATATAACAGAGTCCTTTAAGGATATAGAATAGGGGta                                               <  1:3268617/90‑1 (MQ=255)

                                            ggTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGtat                                              <  1:9935918/93‑1 (MQ=255)

                                            ggTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGtat                                              <  1:2757840/93‑1 (MQ=255)

                                             gTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGtata                                             <  2:5589814/93‑1 (MQ=255)

                                             gTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGtata                                             <  1:7085927/93‑1 (MQ=255)

                                               gCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGc                                           <  1:1804820/93‑1 (MQ=255)

                                                  gTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAc                                        >  2:1281087/1‑93 (MQ=255)

                                                     aaCAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGcc                                     >  2:6630369/1‑93 (MQ=255)

                                                     aaCAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGcc                                     <  1:3918412/93‑1 (MQ=255)

                                                     aaCAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGcc                                     <  2:8209570/93‑1 (MQ=255)

                                                      aCAGCAGAGATATGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAGATAGAATAGGGGTATAGCTACGCCa                                    <  1:5635894/93‑1 (MQ=255)

                                                      aCAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCa                                    <  1:922819/93‑1 (MQ=255)

                                                         gcagAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGaa                                 <  1:8666158/93‑1 (MQ=255)

                                                         gcagAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGaa                                 <  2:6344016/93‑1 (MQ=255)

                                                         gcagAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGaa                                 >  1:8713178/1‑93 (MQ=255)

                                                         gcagAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGaa                                 <  2:3377887/93‑1 (MQ=255)

                                                           agagATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAata                               >  2:209625/1‑93 (MQ=255)

                                                            gagaTACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAatat                              >  2:7332514/1‑93 (MQ=255)

                                                             agaTACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATc                             <  2:6136987/93‑1 (MQ=255)

                                                             agaTACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATc                             >  1:7460331/1‑93 (MQ=255)

                                                                tACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGTATATCGTa                          <  2:1626395/93‑1 (MQ=255)

                                                                tACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTa                          >  2:3204740/1‑93 (MQ=255)

                                                                tACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTa                          <  1:7985008/93‑1 (MQ=255)

                                                                 aCGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAt                         <  1:5482058/93‑1 (MQ=255)

                                                                  cGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAtt                        <  1:4383051/93‑1 (MQ=255)

                                                                   ggCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAttt                       <  2:7141379/93‑1 (MQ=255)

                                                                    gCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTg                      >  1:2896750/1‑93 (MQ=255)

                                                                     ccAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGa                     <  2:2333521/93‑1 (MQ=255)

                                                                       aGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGatt                   >  2:8892069/1‑93 (MQ=255)

                                                                       aGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGatt                   >  1:4115931/1‑93 (MQ=255)

                                                                        gTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGatta                  >  1:1133423/1‑93 (MQ=255)

                                                                        gTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGatta                  <  1:483954/93‑1 (MQ=255)

                                                                        gTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGatta                  <  1:6923302/93‑1 (MQ=255)

                                                                        gTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGatta                  <  2:2677454/93‑1 (MQ=255)

                                                                         tGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGattat                 >  2:5295318/1‑93 (MQ=255)

                                                                         tGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGattat                 <  2:9705651/93‑1 (MQ=255)

                                                                         tGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGattat                 >  1:5725778/1‑93 (MQ=255)

                                                                             gCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCt             >  2:9630592/1‑93 (MQ=255)

                                                                              ccAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCta            <  2:9397897/93‑1 (MQ=255)

                                                                               cAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtag           <  2:7675854/93‑1 (MQ=255)

                                                                               cAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtag           >  2:1818389/1‑93 (MQ=255)

                                                                               cAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtag           <  1:9558279/93‑1 (MQ=255)

                                                                                aaTGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagt          >  2:2476021/1‑93 (MQ=255)

                                                                                aaTGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagt          >  2:880363/1‑93 (MQ=255)

                                                                                aaTGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagt          >  2:4217592/1‑93 (MQ=255)

                                                                                 aTGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtt         >  2:9338840/1‑93 (MQ=255)

                                                                                    ttttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagttttt      <  2:8086662/93‑1 (MQ=255)

                                                                                     tttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagttttta     <  1:3612424/93‑1 (MQ=255)

                                                                                     tttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagttttta     <  1:5025354/93‑1 (MQ=255)

                                                                                      ttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtttttag    >  2:7940896/1‑93 (MQ=255)

                                                                                      ttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtttttag    <  2:7065484/93‑1 (MQ=255)

                                                                                       tttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtttttagt   <  1:6304248/93‑1 (MQ=255)

CCTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTT  >  NC_000913/751916‑752096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 213 total aligned reads displayed.

CCCCTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTTG  >  NC_000913/751914‑752099

CCCCTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGC                                                                                              >  SRR4302540.9756297/1‑94 (MQ=60)

 CCCTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTC                                                                                             >  SRR4302540.6796597/1‑94 (MQ=60)

 CCCTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCC                                                                                             <  SRR4302540.7348841/94‑1 (MQ=60)

  CCTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCC                                                                                            <  SRR4302540.4740763/94‑1 (MQ=60)

   CTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCT                                                                                           >  SRR4302540.397964/1‑94 (MQ=60)

   CTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCT                                                                                           <  SRR4302540.1128523/94‑1 (MQ=60)

    TTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTT                                                                                          >  SRR4302540.4654953/1‑94 (MQ=60)

    TTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTT                                                                                          <  SRR4302540.5242015/94‑1 (MQ=60)

       AAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAA                                                                                       >  SRR4302540.2074436/1‑94 (MQ=60)

       AAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAA                                                                                       >  SRR4302540.7946292/1‑94 (MQ=60)

        AGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAA                                                                                      <  SRR4302540.2656716/94‑1 (MQ=60)

         GTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAC                                                                                     >  SRR4302540.3799330/1‑94 (MQ=60)

         GTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAC                                                                                     <  SRR4302540.8557209/94‑1 (MQ=60)

         GTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAC                                                                                     <  SRR4302540.8078116/94‑1 (MQ=60)

         GTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAA                                                                                     >  SRR4302540.3799331/1‑94 (MQ=60)

          TGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACA                                                                                    <  SRR4302540.165839/94‑1 (MQ=60)

          TGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACA                                                                                    >  SRR4302540.543482/1‑94 (MQ=60)

          TGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACA                                                                                    <  SRR4302540.955942/94‑1 (MQ=60)

          TGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACA                                                                                    <  SRR4302540.1566775/94‑1 (MQ=60)

           GAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACAT                                                                                   <  SRR4302540.1230489/94‑1 (MQ=60)

           GAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACAT                                                                                   <  SRR4302540.5651818/94‑1 (MQ=60)

             ATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAA                                                                                 <  SRR4302540.7114896/94‑1 (MQ=60)

             ATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAA                                                                                 <  SRR4302540.7211482/94‑1 (MQ=60)

             ATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAA                                                                                 <  SRR4302540.9792774/94‑1 (MQ=60)

             ATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAA                                                                                 <  SRR4302540.9323512/94‑1 (MQ=60)

              TTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAAC                                                                                <  SRR4302540.2467245/94‑1 (MQ=60)

              TTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAAC                                                                                <  SRR4302540.5714175/94‑1 (MQ=60)

               TTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACA                                                                               <  SRR4302540.2270724/94‑1 (MQ=60)

               TTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACA                                                                               <  SRR4302540.878424/94‑1 (MQ=60)

               TTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACA                                                                               <  SRR4302540.2995838/94‑1 (MQ=60)

               TTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACA                                                                               <  SRR4302540.7807511/94‑1 (MQ=60)

                TCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATATTTTTTGCCCTTTAAACATAACAG                                                                              <  SRR4302540.5946330/94‑1 (MQ=60)

                 CGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGA                                                                             <  SRR4302540.4725024/94‑1 (MQ=60)

                 CGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGA                                                                             <  SRR4302540.580583/94‑1 (MQ=60)

                 CGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGA                                                                             <  SRR4302540.7929522/94‑1 (MQ=60)

                 CGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGA                                                                             <  SRR4302540.4725025/94‑1 (MQ=60)

                 CGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGA                                                                             <  SRR4302540.8965563/94‑1 (MQ=60)

                  GCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAG                                                                            <  SRR4302540.9707772/94‑1 (MQ=60)

                  GCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAG                                                                            <  SRR4302540.847020/94‑1 (MQ=60)

                  GCCAGAACCTTCATCAACAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAG                                                                            <  SRR4302540.2865098/94‑1 (MQ=60)

                   CCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGT                                                                           >  SRR4302540.5383225/1‑94 (MQ=60)

                   CCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGT                                                                           <  SRR4302540.304632/94‑1 (MQ=60)

                    CAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTC                                                                          >  SRR4302540.4778120/1‑94 (MQ=60)

                    CAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTC                                                                          <  SRR4302540.310738/94‑1 (MQ=60)

                     AGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCC                                                                         >  SRR4302540.10066968/1‑94 (MQ=60)

                     AGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCC                                                                         <  SRR4302540.638186/94‑1 (MQ=60)

                     AGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCC                                                                         >  SRR4302540.8265916/1‑94 (MQ=60)

                     AGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCC                                                                         >  SRR4302540.5818668/1‑94 (MQ=60)

                      GAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCT                                                                        >  SRR4302540.2033165/1‑94 (MQ=60)

                      GAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCT                                                                        <  SRR4302540.2714517/94‑1 (MQ=60)

                      GAACCTTCATCAGAAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCT                                                                        <  SRR4302540.9066867/94‑1 (MQ=60)

                       AACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTT                                                                       <  SRR4302540.1711060/94‑1 (MQ=60)

                        ACCTTCATCAGCAGCATAAACAGGTGCAGTGAACGGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTT                                                                      <  SRR4302540.9049175/94‑1 (MQ=60)

                        ACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTT                                                                      <  SRR4302540.794915/94‑1 (MQ=60)

                        ACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTT                                                                      <  SRR4302540.895826/94‑1 (MQ=60)

                        ACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTT                                                                      >  SRR4302540.1505308/1‑94 (MQ=60)

                         CCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTA                                                                     >  SRR4302540.915556/1‑94 (MQ=60)

                         CCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTA                                                                     >  SRR4302540.6400707/1‑94 (MQ=60)

                         CCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTA                                                                     <  SRR4302540.4441161/94‑1 (MQ=60)

                         CCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTA                                                                     >  SRR4302540.1438662/1‑94 (MQ=60)

                         CCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTA                                                                     >  SRR4302540.7375067/1‑94 (MQ=60)

                         CCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTA                                                                     <  SRR4302540.9608142/94‑1 (MQ=60)

                          CTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAA                                                                    >  SRR4302540.1831013/1‑94 (MQ=60)

                          CTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAA                                                                    >  SRR4302540.8782320/1‑94 (MQ=60)

                          CTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAA                                                                    >  SRR4302540.4227439/1‑94 (MQ=60)

                           TTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTCAACATCACAGAGTCCTTTCAG                                                                   >  SRR4302540.9783763/1‑94 (MQ=60)

                           TTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAG                                                                   >  SRR4302540.9295442/1‑94 (MQ=60)

                           TTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAG                                                                   >  SRR4302540.9231263/1‑94 (MQ=60)

                           TTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAG                                                                   <  SRR4302540.8123956/94‑1 (MQ=60)

                            TCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGG                                                                  >  SRR4302540.8081812/1‑94 (MQ=60)

                             CATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGA                                                                 <  SRR4302540.143211/94‑1 (MQ=60)

                             CATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGA                                                                 <  SRR4302540.5669363/94‑1 (MQ=60)

                              ATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACTGCCAGTGCGGCCAATGTTTTTTGACCTTTAAANATAACAGAGTCCTNTAAGGAT                                                                >  SRR4302540.6443714/1‑94 (MQ=60)

                              ATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAT                                                                <  SRR4302540.9553496/94‑1 (MQ=60)

                              ATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAT                                                                >  SRR4302540.6503211/1‑94 (MQ=60)

                              ATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTGTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAT                                                                <  SRR4302540.9004523/94‑1 (MQ=60)

                                CAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATAT                                                              <  SRR4302540.7423077/94‑1 (MQ=60)

                                CAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATAT                                                              <  SRR4302540.961890/94‑1 (MQ=60)

                                 AGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATA                                                             >  SRR4302540.965785/1‑94 (MQ=60)

                                  GCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAG                                                            <  SRR4302540.7882670/94‑1 (MQ=60)

                                  GCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAG                                                            >  SRR4302540.3126906/1‑94 (MQ=60)

                                  GCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAG                                                            <  SRR4302540.6037910/94‑1 (MQ=60)

                                  GCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAG                                                            <  SRR4302540.2038589/94‑1 (MQ=60)

                                   CAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGA                                                           <  SRR4302540.6045651/94‑1 (MQ=60)

                                    AGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAA                                                          <  SRR4302540.8615649/94‑1 (MQ=60)

                                    AGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAA                                                          >  SRR4302540.6297505/1‑94 (MQ=60)

                                    AGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAA                                                          <  SRR4302540.6965832/94‑1 (MQ=60)

                                    AGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAA                                                          <  SRR4302540.7969665/94‑1 (MQ=60)

                                     GCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAAT                                                         >  SRR4302540.8511108/1‑94 (MQ=60)

                                     GCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAAT                                                         <  SRR4302540.5520905/94‑1 (MQ=60)

                                       ATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAG                                                       >  SRR4302540.7530710/1‑94 (MQ=60)

                                       ATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAG                                                       >  SRR4302540.6579439/1‑94 (MQ=60)

                                       ATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAG                                                       <  SRR4302540.1044986/94‑1 (MQ=60)

                                       ATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAG                                                       >  SRR4302540.5283702/1‑94 (MQ=60)

                                        TAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGG                                                      >  SRR4302540.853913/1‑94 (MQ=60)

                                         AAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGG                                                     >  SRR4302540.6270168/1‑94 (MQ=60)

                                         AAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGG                                                     <  SRR4302540.1838752/94‑1 (MQ=60)

                                           ACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGT                                                   <  SRR4302540.9222760/94‑1 (MQ=60)

                                            CAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTA                                                  <  SRR4302540.3260631/94‑1 (MQ=60)

                                             AGTTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAATATAACAGAGTCCTTTAAGGATATAGAATAGGGGTAT                                                 <  SRR4302540.3304289/94‑1 (MQ=60)

                                             AGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTAT                                                 <  SRR4302540.3304288/94‑1 (MQ=60)

                                              GGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATA                                                <  SRR4302540.2787638/94‑1 (MQ=60)

                                              GGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATA                                                <  SRR4302540.10051868/94‑1 (MQ=60)

                                               GTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAG                                               <  SRR4302540.7164784/94‑1 (MQ=60)

                                                 GCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCT                                             >  SRR4302540.909400/1‑94 (MQ=60)

                                                 GCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCT                                             <  SRR4302540.1824475/94‑1 (MQ=60)

                                                  CAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTA                                            >  SRR4302540.3303996/1‑94 (MQ=60)

                                                   AGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAC                                           <  SRR4302540.3832435/94‑1 (MQ=60)

                                                   AGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAC                                           >  SRR4302540.6013823/1‑94 (MQ=60)

                                                    GTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACG                                          >  SRR4302540.4621056/1‑94 (MQ=60)

                                                     TGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGC                                         <  SRR4302540.3001691/94‑1 (MQ=60)

                                                      GAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCC                                        >  SRR4302540.5277761/1‑94 (MQ=60)

                                                       AACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCATTAAGGATATAGAATAGGGGTATAGCTCCCCCA                                       >  SRR4302540.5903603/1‑94 (MQ=60)

                                                        ACAGCAGAGATATGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGAGATAGAATAGGGGTATAGCTACGCCAG                                      <  SRR4302540.5697918/94‑1 (MQ=60)

                                                        ACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAG                                      <  SRR4302540.932550/94‑1 (MQ=60)

                                                        ACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAG                                      <  SRR4302540.5697919/94‑1 (MQ=60)

                                                          AGCAGAGATACGGCCCGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAA                                    <  SRR4302540.8814392/94‑1 (MQ=60)

                                                          AGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTCCACCAGAA                                    >  SRR4302540.1612058/1‑94 (MQ=60)

                                                          AGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAA                                    <  SRR4302540.2039799/94‑1 (MQ=60)

                                                          AGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAA                                    <  SRR4302540.5774649/94‑1 (MQ=60)

                                                          AGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAA                                    <  SRR4302540.535597/94‑1 (MQ=60)

                                                           GCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAAT                                   <  SRR4302540.8766817/94‑1 (MQ=60)

                                                           GCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAAT                                   <  SRR4302540.3663232/94‑1 (MQ=60)

                                                            CAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTgaggaaattaaattagggcatagtcaagccaggatat                                  >  SRR4302540.6774207/1‑57 (MQ=60)

                                                            CAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATA                                  <  SRR4302540.2700303/94‑1 (MQ=60)

                                                            CAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATA                                  <  SRR4302540.364841/94‑1 (MQ=60)

                                                             AGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGGATAGGGGTATAGCTACGCCAGAATAT                                 <  SRR4302540.9971154/94‑1 (MQ=60)

                                                             AGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATAT                                 <  SRR4302540.5789947/94‑1 (MQ=60)

                                                             AGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATAT                                 <  SRR4302540.7330988/94‑1 (MQ=60)

                                                             AGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATAT                                 >  SRR4302540.9018258/1‑94 (MQ=60)

                                                             AGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATAT                                 >  SRR4302540.6778857/1‑94 (MQ=60)

                                                              GAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATC                                <  SRR4302540.7990238/94‑1 (MQ=60)

                                                              GAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATC                                >  SRR4302540.7543520/1‑94 (MQ=60)

                                                              GAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATC                                >  SRR4302540.9263671/1‑94 (MQ=60)

                                                               AGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCG                               <  SRR4302540.3960099/94‑1 (MQ=60)

                                                                GATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGT                              <  SRR4302540.7012685/94‑1 (MQ=60)

                                                                GATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGT                              >  SRR4302540.4257449/1‑94 (MQ=60)

                                                                 ATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTA                             >  SRR4302540.7337452/1‑94 (MQ=60)

                                                                 ATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAAGCCAGAATATCGTA                             <  SRR4302540.7846677/94‑1 (MQ=60)

                                                                  TACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAT                            <  SRR4302540.3354/94‑1 (MQ=60)

                                                                  TACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAT                            <  SRR4302540.9550530/94‑1 (MQ=60)

                                                                  TACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAT                            <  SRR4302540.7907606/94‑1 (MQ=60)

                                                                  TACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAT                            <  SRR4302540.683012/94‑1 (MQ=60)

                                                                  TACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAT                            <  SRR4302540.8077997/94‑1 (MQ=60)

                                                                  TACGGCCAGTGCGGCCAATGTGTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGACTAGGGGTATAGCTACGCCAGAATATCGTAT                            <  SRR4302540.683011/94‑1 (MQ=60)

                                                                   ACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATT                           <  SRR4302540.1120449/94‑1 (MQ=60)

                                                                   ACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATT                           >  SRR4302540.868502/1‑94 (MQ=60)

                                                                   ACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATT                           <  SRR4302540.5542406/94‑1 (MQ=60)

                                                                    CGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTT                          <  SRR4302540.4430642/94‑1 (MQ=60)

                                                                     GGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTG                         <  SRR4302540.2832672/94‑1 (MQ=60)

                                                                     GGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTG                         >  SRR4302540.2928339/1‑94 (MQ=60)

                                                                     GGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTG                         >  SRR4302540.8749849/1‑94 (MQ=60)

                                                                      GCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGA                        >  SRR4302540.3779690/1‑94 (MQ=60)

                                                                        CAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATT                      >  SRR4302540.4160365/1‑94 (MQ=60)

                                                                        CAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATT                      >  SRR4302540.967444/1‑94 (MQ=60)

                                                                        CAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATT                      >  SRR4302540.4307187/1‑94 (MQ=60)

                                                                         AGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTA                     >  SRR4302540.1145236/1‑94 (MQ=60)

                                                                         AGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTA                     <  SRR4302540.8101359/94‑1 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    <  SRR4302540.7000348/94‑1 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    <  SRR4302540.411658/94‑1 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    <  SRR4302540.411660/94‑1 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    >  SRR4302540.5788823/1‑94 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    <  SRR4302540.5517137/94‑1 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    <  SRR4302540.632445/94‑1 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    <  SRR4302540.489129/94‑1 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    >  SRR4302540.3255545/1‑94 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    <  SRR4302540.2902250/94‑1 (MQ=60)

                                                                          GTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTAT                    >  SRR4302540.2613673/1‑94 (MQ=60)

                                                                             CGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGC                 <  SRR4302540.3316022/94‑1 (MQ=60)

                                                                               GCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTA               >  SRR4302540.2366472/1‑94 (MQ=60)

                                                                               GCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTA               <  SRR4302540.180293/94‑1 (MQ=60)

                                                                               GCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTA               >  SRR4302540.5038479/1‑94 (MQ=60)

                                                                                CCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAG              >  SRR4302540.5368461/1‑94 (MQ=60)

                                                                                 CAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGTCAGAATATCGTATTTGATTATTGCTAGT             <  SRR4302540.7424785/94‑1 (MQ=60)

                                                                                 CAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGT             <  SRR4302540.9671297/94‑1 (MQ=60)

                                                                                 CAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGT             >  SRR4302540.2214343/1‑94 (MQ=60)

                                                                                 CAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGT             >  SRR4302540.9612003/1‑94 (MQ=60)

                                                                                 CAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGT             >  SRR4302540.1734349/1‑94 (MQ=60)

                                                                                  AATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTT            >  SRR4302540.4919701/1‑94 (MQ=60)

                                                                                  AATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTT            >  SRR4302540.8321742/1‑94 (MQ=60)

                                                                                  AATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTT            >  SRR4302540.8321743/1‑94 (MQ=60)

                                                                                  AATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTT            >  SRR4302540.4919700/1‑94 (MQ=60)

                                                                                     GTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTT         <  SRR4302540.5119386/94‑1 (MQ=60)

                                                                                      TTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTA        <  SRR4302540.7051421/94‑1 (MQ=60)

                                                                                      TTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTA        >  SRR4302540.8712660/1‑94 (MQ=60)

                                                                                       TTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAG       <  SRR4302540.5079749/94‑1 (MQ=60)

                                                                                       TTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAG       <  SRR4302540.3651919/94‑1 (MQ=60)

                                                                                        TTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGT      >  SRR4302540.2955981/1‑94 (MQ=60)

                                                                                        TTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGT      <  SRR4302540.8768471/94‑1 (MQ=60)

                                                                                         TTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTT     <  SRR4302540.6374449/94‑1 (MQ=60)

                                                                                          TTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTT    >  SRR4302540.2645877/1‑94 (MQ=60)

                                                                                           TGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTT   <  SRR4302540.8183727/94‑1 (MQ=60)

                                                                                           TGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTT   <  SRR4302540.1406868/94‑1 (MQ=60)

                                                                                           TGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTT   >  SRR4302540.10130512/1‑94 (MQ=60)

                                                                                           TGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTT   <  SRR4302540.6452536/94‑1 (MQ=60)

                                                                                           TGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTT   <  SRR4302540.844116/94‑1 (MQ=60)

                                                                                           TGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGCGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTT   <  SRR4302540.3855510/94‑1 (MQ=60)

                                                                                            GCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTTG  <  SRR4302540.9531727/94‑1 (MQ=60)

                                                                                            GCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTTG  <  SRR4302540.360429/94‑1 (MQ=60)

                                                                                            GCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTTG  >  SRR4302540.6315726/1‑94 (MQ=60)

CCCCTTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTTTTG  >  NC_000913/751914‑752099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`