Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	987,323	C→T	A296T (GCC→ACC)	asnS ←	asparagine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	987,323	0	C	T	99.5%	1256.0 / ‑4.8	368	A296T (GCC→ACC)	asnS	asparagine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (162/202); total (165/203)
Fisher's exact test for biased strand distribution p-value = 2.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.07e-01

Only 100 of 385 total aligned reads displayed.

TTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG  >  NC_000913/987232‑987412

 tCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTAt                                                                                         <  2:6147380/93‑1 (MQ=255)

 tCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTAt                                                                                         >  2:6413559/1‑93 (MQ=255)

   cTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCTGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCt                                                                                       <  2:2951468/93‑1 (MQ=255)

   cTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGGATCt                                                                                       >  2:5430344/1‑93 (MQ=255)

    tGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCtt                                                                                      >  2:2107795/1‑93 (MQ=255)

    tGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCtt                                                                                      >  1:7817704/1‑93 (MQ=255)

      ccGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTa                                                                                    <  2:1964044/93‑1 (MQ=255)

        gCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATc                                                                                  >  1:1920806/1‑93 (MQ=255)

         cAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCt                                                                                 <  1:3823635/93‑1 (MQ=255)

          aGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTa                                                                                <  2:8437516/93‑1 (MQ=255)

           gTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAc                                                                               >  2:8743473/1‑93 (MQ=255)

           gTTTTAGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAc                                                                               <  1:2542248/93‑1 (MQ=255)

            ttttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcg                                                                              >  2:3951688/1‑93 (MQ=255)

             tttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcgc                                                                             <  1:6664011/93‑1 (MQ=255)

             tttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcgc                                                                             >  2:7898290/1‑93 (MQ=255)

                 gagaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTc                                                                         <  2:626859/93‑1 (MQ=255)

                 gagaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTc                                                                         <  1:5769029/93‑1 (MQ=255)

                  agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        <  1:9877328/93‑1 (MQ=255)

                  agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        >  1:8470831/1‑93 (MQ=255)

                  agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        <  1:9464836/93‑1 (MQ=255)

                  agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        >  2:4411637/1‑93 (MQ=255)

                   gaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAg                                                                       >  2:7538376/1‑93 (MQ=255)

                    aaTGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGc                                                                      <  1:7429490/93‑1 (MQ=255)

                    aaTGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGc                                                                      <  1:8370086/93‑1 (MQ=255)

                      tGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCga                                                                    >  1:9656858/1‑93 (MQ=255)

                      tGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCga                                                                    >  1:2548041/1‑93 (MQ=255)

                       ggTCCCGGCGTCGGTAAAATCCACCGGCCAAAATTCGCCTTAAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaa                                                                   <  1:755197/93‑1 (MQ=255)

                         gcACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaaga                                                                 <  2:7168451/92‑1 (MQ=255)

                           aCTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAt                                                               >  1:1544169/1‑93 (MQ=255)

                             tGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAttt                                                             >  1:993829/1‑93 (MQ=255)

                             tGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAttt                                                             >  2:6598536/1‑93 (MQ=255)

                              gCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTc                                                            >  2:1195184/1‑93 (MQ=255)

                               cGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCa                                                           <  2:2271955/93‑1 (MQ=255)

                                gTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAt                                                          >  1:3141845/1‑93 (MQ=255)

                                gTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAt                                                          <  1:4188866/93‑1 (MQ=255)

                                  cGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAATCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgt                                                        <  2:8619849/93‑1 (MQ=255)

                                  cGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgt                                                        <  1:7785881/93‑1 (MQ=255)

                                  cGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgt                                                        >  2:2602216/1‑93 (MQ=255)

                                      ataATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgtcgtc                                                    >  1:3299014/1‑93 (MQ=255)

                                      ataATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgtcgtc                                                    <  1:3629812/93‑1 (MQ=255)

                                       taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgtcgtcg                                                   >  1:8605435/1‑92 (MQ=255)

                                       taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCa                                                   <  2:2723996/93‑1 (MQ=255)

                                       taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCa                                                   <  1:9018182/93‑1 (MQ=255)

                                       taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCa                                                   <  1:6626212/93‑1 (MQ=255)

                                          tCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAgcg                                                >  1:1938706/1‑93 (MQ=255)

                                             cccTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGt                                             <  1:498537/92‑1 (MQ=255)

                                             aCCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGt                                             >  1:2222035/1‑93 (MQ=255)

                                              ccTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTa                                                                                >  1:1633539/1‑57 (MQ=255)

                                              ccTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGtt                                            >  1:7727642/1‑93 (MQ=255)

                                               cTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttc                                           >  2:2084678/1‑93 (MQ=255)

                                               cTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttc                                           >  1:8232000/1‑93 (MQ=255)

                                               cTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttc                                           <  1:8397893/93‑1 (MQ=255)

                                                 gcgcAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttctt                                         <  1:4325437/93‑1 (MQ=255)

                                                 gcgcAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttctt                                         <  2:9486276/93‑1 (MQ=255)

                                                   gcAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCg                                       <  1:7929902/93‑1 (MQ=255)

                                                      aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTTAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgaga                                    <  2:4667803/93‑1 (MQ=255)

                                                      aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgaga                                    >  1:4093263/1‑93 (MQ=255)

                                                      aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgaga                                    >  2:490856/1‑93 (MQ=255)

                                                      aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGAGTTCTTCgaga                                    >  1:4222855/1‑93 (MQ=255)

                                                       aaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGaa                                   <  1:6202471/93‑1 (MQ=255)

                                                        aTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAc                                  <  2:6760935/93‑1 (MQ=255)

                                                        aTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAc                                  <  1:5567086/93‑1 (MQ=255)

                                                        aTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAc                                  >  2:9577440/1‑93 (MQ=255)

                                                        aTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCCTCGAGAAc                                  <  2:3440365/93‑1 (MQ=255)

                                                         tCGGCTTCAATGAAGCGTTCCAGACGTGGAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAcc                                 >  1:10014832/1‑93 (MQ=255)

                                                          cGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCg                                <  2:1805452/93‑1 (MQ=255)

                                                           ggCTTCAATGAAGCGTTCGAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGc                               <  2:9879/93‑1 (MQ=255)

                                                            gCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCt                              >  1:3930186/1‑93 (MQ=255)

                                                             cTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCtt                             >  1:2902434/1‑93 (MQ=255)

                                                             cTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCtt                             <  1:4573874/93‑1 (MQ=255)

                                                                 aaTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGTAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         <  2:5980588/93‑1 (MQ=255)

                                                                 aaTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         >  1:2668424/1‑93 (MQ=255)

                                                                 aaTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         >  1:7185950/1‑93 (MQ=255)

                                                                  aTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAg                        >  2:8084719/1‑93 (MQ=255)

                                                                   tGAAGCGTTCCAGACGCGAAACAGTAACTTTTTCTATTTGTTCATGGAAAAATTTAATATAGCCCGCACGTAATTCGACAACTGCATTGACGa                       >  2:358611/1‑93 (MQ=255)

                                                                    gAAGCGTTCCGGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGAc                      <  1:5311452/93‑1 (MQ=255)

                                                                    gAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGAc                      >  2:3113869/1‑93 (MQ=255)

                                                                     aaGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACa                     <  2:7654998/93‑1 (MQ=255)

                                                                      aGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACat                    <  1:1232045/93‑1 (MQ=255)

                                                                      aGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACat                    <  2:1681353/93‑1 (MQ=255)

                                                                       gCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACata                   >  2:4642582/1‑93 (MQ=255)

                                                                       gCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACata                   >  1:8151807/1‑93 (MQ=255)

                                                                          ttCCAGACGTGACACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATAttt                <  2:5139025/93‑1 (MQ=255)

                                                                          ttCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATAttt                <  2:5612856/93‑1 (MQ=255)

                                                                           tCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTc               <  2:9244219/93‑1 (MQ=255)

                                                                            ccAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCa              >  2:3316866/1‑93 (MQ=255)

                                                                            ccAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCa              <  2:3789527/93‑1 (MQ=255)

                                                                            ccAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCa              <  1:608851/93‑1 (MQ=255)

                                                                              aGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGc            >  1:5509951/1‑93 (MQ=255)

                                                                               gACGTGAAACGGGATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCa           <  1:1859440/93‑1 (MQ=255)

                                                                               aaagTGAAACGGTATCTTTAGTTACGCGTGAAGCGAAGAAGTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCa           <  1:1460510/90‑1 (MQ=255)

                                                                                aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          >  1:4867909/1‑93 (MQ=255)

                                                                                aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          <  1:8697222/93‑1 (MQ=255)

                                                                                aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          <  1:6152750/93‑1 (MQ=255)

                                                                                aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          <  2:607490/93‑1 (MQ=255)

                                                                                   agAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTACGAGAACAGCTTTGAAGACATATTTCAGCATGGc       <  2:6934321/92‑1 (MQ=255)

                                                                                     aaaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCtt     <  2:5282110/93‑1 (MQ=255)

                                                                                      aaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTc    <  2:152206/93‑1 (MQ=255)

                                                                                      aaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTc    >  1:6774087/1‑93 (MQ=255)

                                                                                       aCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCa   <  1:2395171/93‑1 (MQ=255)

TTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG  >  NC_000913/987232‑987412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 220 total aligned reads displayed.

ACTTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGCCAG  >  NC_000913/987230‑987416

ACTTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGT                                                                                               <  SRR4302540.8338276/94‑1 (MQ=60)

 CTTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTA                                                                                              >  SRR4302540.6030347/1‑94 (MQ=60)

  TTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTAT                                                                                             <  SRR4302540.1946393/94‑1 (MQ=60)

     CTGCCGCAGTTTTCGAGAATGGTCACTGCGTCTGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTT                                                                                          <  SRR4302540.8981816/94‑1 (MQ=60)

     CTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTT                                                                                          <  SRR4302540.6673841/94‑1 (MQ=60)

     CTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTT                                                                                          >  SRR4302540.8631442/1‑94 (MQ=60)

     CTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTT                                                                                          >  SRR4302540.7909068/1‑94 (MQ=60)

      TGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATGATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTT                                                                                         >  SRR4302540.8489121/1‑94 (MQ=60)

       GCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTA                                                                                        >  SRR4302540.5019951/1‑94 (MQ=60)

       GCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTA                                                                                        <  SRR4302540.2446361/94‑1 (MQ=60)

       GCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTA                                                                                        <  SRR4302540.9781396/94‑1 (MQ=60)

        CCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTAT                                                                                       <  SRR4302540.7589702/94‑1 (MQ=60)

        CCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTAT                                                                                       >  SRR4302540.4835552/1‑94 (MQ=60)

        CCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTAT                                                                                       >  SRR4302540.5575358/1‑94 (MQ=60)

         CGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATC                                                                                      >  SRR4302540.1941758/1‑94 (MQ=60)

         CGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATC                                                                                      <  SRR4302540.8250234/94‑1 (MQ=60)

         CGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATATTTATC                                                                                      >  SRR4302540.3887932/1‑94 (MQ=60)

          GCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCTCCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCT                                                                                     <  SRR4302540.5720199/94‑1 (MQ=60)

           CAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTA                                                                                    <  SRR4302540.3865243/94‑1 (MQ=60)

            AGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAC                                                                                   <  SRR4302540.4263886/94‑1 (MQ=60)

            AGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAC                                                                                   >  SRR4302540.185792/1‑94 (MQ=60)

            AGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAC                                                                                   <  SRR4302540.6728826/94‑1 (MQ=60)

            AGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAC                                                                                   >  SRR4302540.6861721/1‑94 (MQ=60)

             GTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACG                                                                                  >  SRR4302540.8384864/1‑94 (MQ=60)

             GTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACG                                                                                  >  SRR4302540.2639924/1‑94 (MQ=60)

             GTTTTAGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACG                                                                                  <  SRR4302540.2569656/94‑1 (MQ=60)

              TTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGC                                                                                 <  SRR4302540.9614496/94‑1 (MQ=60)

               TTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCG                                                                                <  SRR4302540.6737676/94‑1 (MQ=60)

                 TCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTT                                                                              <  SRR4302540.394977/94‑1 (MQ=60)

                   GAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCA                                                                            >  SRR4302540.4360651/1‑94 (MQ=60)

                   GAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCA                                                                            <  SRR4302540.5832742/94‑1 (MQ=60)

                   GAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCA                                                                            >  SRR4302540.622160/1‑94 (MQ=60)

                   GAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCA                                                                            >  SRR4302540.8569207/1‑94 (MQ=60)

                    AGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAG                                                                           <  SRR4302540.8509778/94‑1 (MQ=60)

                    AGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAG                                                                           <  SRR4302540.8509772/94‑1 (MQ=60)

                    AGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAG                                                                           <  SRR4302540.9992682/94‑1 (MQ=60)

                    AGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAG                                                                           <  SRR4302540.9577121/94‑1 (MQ=60)

                    AGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAG                                                                           <  SRR4302540.1498092/94‑1 (MQ=60)

                     GAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTCTCTACGCGTTCAGC                                                                          <  SRR4302540.6791368/94‑1 (MQ=60)

                     GAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGC                                                                          <  SRR4302540.6770520/94‑1 (MQ=60)

                     GAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGC                                                                          <  SRR4302540.2013139/94‑1 (MQ=60)

                      AATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCG                                                                         <  SRR4302540.1014690/94‑1 (MQ=60)

                      AATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCG                                                                         <  SRR4302540.7512251/94‑1 (MQ=60)

                      AATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCG                                                                         <  SRR4302540.8467227/94‑1 (MQ=60)

                      AATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCG                                                                         <  SRR4302540.8467228/94‑1 (MQ=60)

                       ATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGA                                                                        >  SRR4302540.7878149/1‑94 (MQ=60)

                       ATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGA                                                                        <  SRR4302540.79488/94‑1 (MQ=60)

                       ATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGA                                                                        >  SRR4302540.2575504/1‑94 (MQ=60)

                       ATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGA                                                                        >  SRR4302540.2575503/1‑94 (MQ=60)

                       ATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGA                                                                        >  SRR4302540.9770537/1‑94 (MQ=60)

                       ATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGGTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGA                                                                        >  SRR4302540.1148814/1‑94 (MQ=60)

                        TGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAA                                                                       <  SRR4302540.7845529/94‑1 (MQ=60)

                        TGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAA                                                                       >  SRR4302540.3737368/1‑94 (MQ=60)

                         GGTCCCGGCGTCGGTAAAATCCACCGGCCAAAATTCGCCTTAAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAG                                                                      <  SRR4302540.763250/94‑1 (MQ=48)

                          GTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCCGCGAAGA                                                                     >  SRR4302540.1385399/1‑94 (MQ=60)

                            CACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAT                                                                   >  SRR4302540.1561220/1‑94 (MQ=60)

                             ACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGCAACGGTATCTTTATCTACGCGTTCAGCGAAGAATT                                                                  >  SRR4302540.4232824/1‑94 (MQ=60)

                             ACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATT                                                                  >  SRR4302540.7679700/1‑94 (MQ=60)

                             ACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATT                                                                  >  SRR4302540.2634836/1‑94 (MQ=60)

                              CTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTT                                                                 >  SRR4302540.1003954/1‑94 (MQ=60)

                              CTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTT                                                                 >  SRR4302540.387670/1‑94 (MQ=60)

                              CTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTT                                                                 >  SRR4302540.270837/1‑94 (MQ=60)

                               TGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTC                                                                >  SRR4302540.2270396/1‑94 (MQ=60)

                               TGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGGATCTTTATCTACGCGCTCAGCGAAGAATTTC                                                                >  SRR4302540.1395957/1‑94 (MQ=60)

                                 CTTCGGTATCATGCACCTGCGCAAAATCGTCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTAGCTACGCGTTCAGCGAAGAATTTCAT                                                              <  SRR4302540.3127646/94‑1 (MQ=60)

                                 CGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAT                                                              >  SRR4302540.8709286/1‑94 (MQ=60)

                                 CGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAT                                                              <  SRR4302540.8000993/94‑1 (MQ=60)

                                 CGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAT                                                              <  SRR4302540.3127649/94‑1 (MQ=60)

                                 CGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAT                                                              >  SRR4302540.3176096/1‑94 (MQ=60)

                                 CGTCGATATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAT                                                              <  SRR4302540.1924305/94‑1 (MQ=60)

                                  GTCGGTATAATCCCCCGGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATG                                                             <  SRR4302540.4019596/94‑1 (MQ=60)

                                  GTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATG                                                             <  SRR4302540.4234410/94‑1 (MQ=60)

                                  GTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATG                                                             >  SRR4302540.1898508/1‑94 (MQ=60)

                                   TCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGT                                                            <  SRR4302540.9750774/94‑1 (MQ=60)

                                    CGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTG                                                           >  SRR4302540.4940409/1‑94 (MQ=60)

                                    CGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTC                                                           <  SRR4302540.7876893/94‑1 (MQ=60)

                                    CGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTC                                                           >  SRR4302540.8253900/1‑94 (MQ=60)

                                    CGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTC                                                           <  SRR4302540.441525/94‑1 (MQ=60)

                                     GGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCG                                                          >  SRR4302540.3310863/1‑94 (MQ=60)

                                     GGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCG                                                          <  SRR4302540.2933815/94‑1 (MQ=60)

                                     GGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCG                                                          >  SRR4302540.8829367/1‑94 (MQ=60)

                                      GTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGT                                                         >  SRR4302540.567102/1‑94 (MQ=60)

                                       TATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTC                                                        >  SRR4302540.6709383/1‑94 (MQ=60)

                                       TATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTC                                                        >  SRR4302540.3335120/1‑94 (MQ=60)

                                        ATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCG                                                       >  SRR4302540.8705432/1‑94 (MQ=60)

                                        ATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCA                                                       >  SRR4302540.2129183/1‑94 (MQ=60)

                                         TAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAG                                                      <  SRR4302540.6699571/94‑1 (MQ=60)

                                         TAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAG                                                      <  SRR4302540.9126391/94‑1 (MQ=60)

                                          AATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGC                                                     >  SRR4302540.15271/1‑94 (MQ=60)

                                           ATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCG                                                    >  SRR4302540.1959820/1‑94 (MQ=60)

                                           ATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCG                                                    >  SRR4302540.1959819/1‑94 (MQ=60)

                                            TCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCCGCGC                                                   >  SRR4302540.2574262/1‑94 (MQ=60)

                                            TCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGC                                                   >  SRR4302540.559268/1‑94 (MQ=60)

                                             CCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCG                                                  <  SRR4302540.3483945/94‑1 (MQ=60)

                                              CACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGT                                                 >  SRR4302540.2245989/1‑94 (MQ=60)

                                               CCCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTT                                                <  SRR4302540.503879/94‑1 (MQ=60)

                                               ACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACaagcgctagatcggaagagcggttcagcaggaatg                                                >  SRR4302540.1651411/1‑59 (MQ=60)

                                               ACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTT                                                >  SRR4302540.8106380/1‑94 (MQ=60)

                                               ACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTT                                                >  SRR4302540.7817847/1‑94 (MQ=60)

                                               ACCTGCACAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTT                                                >  SRR4302540.4686530/1‑94 (MQ=60)

                                                CCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTC                                               >  SRR4302540.8327684/1‑94 (MQ=60)

                                                CCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTC                                               >  SRR4302540.4343017/1‑94 (MQ=60)

                                                 CTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCT                                              <  SRR4302540.5079978/94‑1 (MQ=60)

                                                 CTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCT                                              >  SRR4302540.1955479/1‑94 (MQ=60)

                                                 CTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCT                                              <  SRR4302540.4451754/94‑1 (MQ=60)

                                                 CTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCT                                              <  SRR4302540.8495351/94‑1 (MQ=60)

                                                 CTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCT                                              <  SRR4302540.8495352/94‑1 (MQ=60)

                                                  TGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTT                                             <  SRR4302540.734348/94‑1 (MQ=60)

                                                   GCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTC                                            <  SRR4302540.2916919/94‑1 (MQ=60)

                                                   GCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTC                                            <  SRR4302540.4372530/94‑1 (MQ=60)

                                                    CGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCG                                           >  SRR4302540.2355941/1‑94 (MQ=60)

                                                    CGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCG                                           <  SRR4302540.5639814/94‑1 (MQ=60)

                                                     GCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGA                                          <  SRR4302540.8022330/94‑1 (MQ=60)

                                                      CAAAATCGGCTTCAATGAAGCGTTCTAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAG                                         <  SRR4302540.4039960/94‑1 (MQ=60)

                                                      CAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAG                                         <  SRR4302540.1330230/94‑1 (MQ=60)

                                                       AAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGGGTTCAGGGAAGAATTTCATCTTGTCAGCGCGTTTTTCGAGA                                        >  SRR4302540.6162296/1‑94 (MQ=60)

                                                       AAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGA                                        >  SRR4302540.6162295/1‑94 (MQ=60)

                                                       AAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGA                                        >  SRR4302540.7765599/1‑94 (MQ=60)

                                                       AAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGA                                        >  SRR4302540.5388449/1‑94 (MQ=60)

                                                       AAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGA                                        >  SRR4302540.4137426/1‑94 (MQ=60)

                                                       AAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGA                                        >  SRR4302540.4137427/1‑94 (MQ=60)

                                                       AAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGAGTTCTTCGAGA                                        >  SRR4302540.4268822/1‑94 (MQ=60)

                                                         AATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAC                                      <  SRR4302540.6271516/94‑1 (MQ=60)

                                                          ATCGGCTTCAATGAAGCGTTCCAGACGTGGAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACC                                     >  SRR4302540.10131417/1‑94 (MQ=60)

                                                          ATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGCACC                                     >  SRR4302540.6228211/1‑94 (MQ=60)

                                                          ATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACC                                     >  SRR4302540.7066659/1‑94 (MQ=60)

                                                          ATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACC                                     <  SRR4302540.4236860/94‑1 (MQ=60)

                                                          ATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACC                                     <  SRR4302540.5628387/94‑1 (MQ=60)

                                                           TCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCC                                    >  SRR4302540.8786644/1‑94 (MQ=60)

                                                             GGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCT                                  <  SRR4302540.7918700/94‑1 (MQ=60)

                                                             GGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCT                                  >  SRR4302540.3972682/1‑94 (MQ=60)

                                                              GCTTGAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTT                                 <  SRR4302540.8873190/94‑1 (MQ=60)

                                                              GCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTT                                 <  SRR4302540.1615545/94‑1 (MQ=60)

                                                              GCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTT                                 >  SRR4302540.2934115/1‑94 (MQ=60)

                                                               GTTCAATGAAGCGTTCCAGACGTTAAACGGTATCTTTATCTACGGGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCCCTTT                                <  SRR4302540.6103489/94‑1 (MQ=60)

                                                               CTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTT                                <  SRR4302540.2565653/94‑1 (MQ=60)

                                                               CTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTT                                <  SRR4302540.4623222/94‑1 (MQ=60)

                                                               CTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTT                                <  SRR4302540.5179837/94‑1 (MQ=60)

                                                               CTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTT                                <  SRR4302540.6103487/94‑1 (MQ=60)

                                                                TTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTG                               >  SRR4302540.4141795/1‑94 (MQ=60)

                                                                TTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTG                               >  SRR4302540.858320/1‑94 (MQ=60)

                                                                TTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTG                               >  SRR4302540.7819342/1‑94 (MQ=60)

                                                                TTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTG                               >  SRR4302540.6470056/1‑94 (MQ=60)

                                                                 TCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGA                              <  SRR4302540.3278765/94‑1 (MQ=60)

                                                                  CAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAA                             >  SRR4302540.7266055/1‑94 (MQ=60)

                                                                  CAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAA                             >  SRR4302540.2697338/1‑94 (MQ=60)

                                                                  CAATGAAGCGATCCAGACGTGAAACGATATCGTTATCTACGCGTTCAGCGAAGAATTACATGCCGTCACCGCGTTCTTCGAGAACCGCTTTGAA                             <  SRR4302540.5313508/94‑1 (MQ=60)

                                                                   AATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAG                            <  SRR4302540.3786547/94‑1 (MQ=60)

                                                                   AATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAG                            <  SRR4302540.5004404/94‑1 (MQ=60)

                                                                   AATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGAGTTCTTCGAGAACCGCTTTGAAG                            <  SRR4302540.1855142/94‑1 (MQ=60)

                                                                    ATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGA                           <  SRR4302540.1573280/94‑1 (MQ=60)

                                                                      GAAGCGTTCCGGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACA                         <  SRR4302540.5369603/94‑1 (MQ=60)

                                                                       AAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACAT                        >  SRR4302540.5841769/1‑94 (MQ=60)

                                                                        AGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATT                       >  SRR4302540.7331108/1‑94 (MQ=60)

                                                                        AGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATA                       <  SRR4302540.1244625/94‑1 (MQ=60)

                                                                        AGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATA                       <  SRR4302540.7548715/94‑1 (MQ=60)

                                                                        AGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATA                       >  SRR4302540.8246443/1‑94 (MQ=60)

                                                                         GCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATAT                      <  SRR4302540.3494476/94‑1 (MQ=60)

                                                                         GCGGTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATAT                      <  SRR4302540.3380029/94‑1 (MQ=60)

                                                                          CGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATT                     <  SRR4302540.3279923/94‑1 (MQ=60)

                                                                          CGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATT                     <  SRR4302540.8238886/94‑1 (MQ=60)

                                                                           GTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTT                    >  SRR4302540.9574306/1‑94 (MQ=60)

                                                                           GTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTT                    >  SRR4302540.4726306/1‑94 (MQ=60)

                                                                           GTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTT                    <  SRR4302540.6987972/94‑1 (MQ=60)

                                                                            TTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTC                   <  SRR4302540.3797110/94‑1 (MQ=60)

                                                                            TTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTC                   <  SRR4302540.5624832/94‑1 (MQ=60)

                                                                             TCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCA                  <  SRR4302540.2577446/94‑1 (MQ=60)

                                                                             TCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCA                  <  SRR4302540.7606031/94‑1 (MQ=60)

                                                                              CCAGACGTGAAACGGTGTCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAG                 <  SRR4302540.7887960/94‑1 (MQ=60)

                                                                              CCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAG                 >  SRR4302540.9943144/1‑94 (MQ=60)

                                                                              CCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAG                 >  SRR4302540.1936663/1‑94 (MQ=60)

                                                                              CCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAG                 <  SRR4302540.615359/94‑1 (MQ=60)

                                                                               CAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGC                >  SRR4302540.5570635/1‑94 (MQ=60)

                                                                                 aaaGTGAAACGGTATCTTTAGTTACGCGTGAAGCGAAGAAGTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAT              <  SRR4302540.1476415/91‑1 (MQ=60)

                                                                                 GACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAT              <  SRR4302540.7293092/94‑1 (MQ=60)

                                                                                 GACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAT              <  SRR4302540.5365053/94‑1 (MQ=60)

                                                                                  ACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATG             <  SRR4302540.6221281/94‑1 (MQ=60)

                                                                                  ACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATG             <  SRR4302540.6221282/94‑1 (MQ=60)

                                                                                  ACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATG             <  SRR4302540.8798187/94‑1 (MQ=60)

                                                                                   CGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGG            <  SRR4302540.6574799/94‑1 (MQ=60)

                                                                                   CGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGG            >  SRR4302540.9266877/1‑94 (MQ=60)

                                                                                   AGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGG            <  SRR4302540.1637755/94‑1 (MQ=60)

                                                                                    GTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGC           >  SRR4302540.10045104/1‑94 (MQ=60)

                                                                                    GTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGC           <  SRR4302540.8394221/94‑1 (MQ=60)

                                                                                    GTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGC           >  SRR4302540.9859421/1‑94 (MQ=60)

                                                                                     TGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATCTTTCAGAATGGCT          >  SRR4302540.2505713/1‑94 (MQ=60)

                                                                                     TGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCT          <  SRR4302540.8709249/94‑1 (MQ=60)

                                                                                     TGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCT          <  SRR4302540.1696293/94‑1 (MQ=60)

                                                                                       AAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTC        >  SRR4302540.6848954/1‑94 (MQ=60)

                                                                                        AACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCA       <  SRR4302540.8315154/94‑1 (MQ=60)

                                                                                         ACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG      <  SRR4302540.4497146/94‑1 (MQ=60)

                                                                                         ACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG      <  SRR4302540.961848/94‑1 (MQ=60)

                                                                                         ACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG      <  SRR4302540.2420982/94‑1 (MQ=60)

                                                                                          CGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGC     >  SRR4302540.3754771/1‑94 (MQ=60)

                                                                                          CGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGC     <  SRR4302540.7782732/94‑1 (MQ=60)

                                                                                            GTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGCCA   <  SRR4302540.6302553/94‑1 (MQ=60)

                                                                                            GTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGCCA   >  SRR4302540.7915309/1‑94 (MQ=60)

                                                                                             TATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGCCAG  >  SRR4302540.3964694/1‑94 (MQ=60)

                                                                                             TATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGCCAG  >  SRR4302540.6640118/1‑94 (MQ=60)

                                                                                             TATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGCCAG  <  SRR4302540.2533406/94‑1 (MQ=60)

ACTTCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAGCCAG  >  NC_000913/987230‑987416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`