Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,216,420 A→G intergenic (+201/‑89) ymgC → / → b1168 hypothetical protein/putative proteases

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,216,4200AG99.5% 1263.5 / NA 386intergenic (+201/‑89)ymgC/b1168hypothetical protein/putative proteases
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (166/218);  minor base T (1/1);  total (167/219)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 390 total aligned reads displayed.

ATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAA  >  NC_000913/1216330‑1216509
                                                                                          |                                                                                         
aTGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGa                                                                                         <  1:6546804/93‑1 (MQ=255)
 tGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGAt                                                                                        >  2:9500694/1‑93 (MQ=255)
 tGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGAt                                                                                        >  2:2333786/1‑93 (MQ=255)
  ggAGAGTTCTCGCTCTCCATTCTTGACGCCTGATCTCCCGCCTAACTTATTTTGTCATGCCTACATCATGCTCCATAATTACTGGGATAGAta                                                                                       >  1:1333935/1‑92 (MQ=255)
   gagaGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCa                                                                                      >  1:9951018/1‑93 (MQ=255)
      atntctcGCNCTCCATTCTTGNNGCNTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGa                                                                                   <  1:264223/90‑1 (MQ=255)
      agTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGa                                                                                   >  1:8566960/1‑93 (MQ=255)
      agTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGa                                                                                   <  1:5050147/93‑1 (MQ=255)
        ttCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATg                                                                                 >  1:4063786/1‑93 (MQ=255)
        ttCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATg                                                                                 >  1:3353067/1‑93 (MQ=255)
        ttCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATg                                                                                 >  1:8349916/1‑93 (MQ=255)
        ttCTCCCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATg                                                                                 <  2:7559786/93‑1 (MQ=255)
           tcGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGgag                                                                              >  1:5197470/1‑93 (MQ=255)
           tcGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGgag                                                                              >  2:9699061/1‑93 (MQ=255)
            cGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGgaga                                                                             <  2:9013366/93‑1 (MQ=255)
            cGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGgaga                                                                             <  1:1382429/93‑1 (MQ=255)
            cGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGgaga                                                                             <  1:3628849/93‑1 (MQ=255)
                  ccATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAAttt                                                                       >  2:3541448/1‑93 (MQ=255)
                  ccATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAAttt                                                                       <  2:2883894/93‑1 (MQ=255)
                   cATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAAtttt                                                                      >  2:7821670/1‑93 (MQ=255)
                     ttCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAACATTTTAt                                                                    >  1:9046453/1‑93 (MQ=255)
                     ttCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTAt                                                                    <  2:6150752/93‑1 (MQ=255)
                     ttCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTAt                                                                    <  1:7404732/93‑1 (MQ=255)
                     ttCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTAt                                                                    <  1:9635695/93‑1 (MQ=255)
                      tCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATc                                                                   <  2:9784999/93‑1 (MQ=255)
                        ttGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCtt                                                                 <  1:6998521/93‑1 (MQ=255)
                        ttGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCtt                                                                 <  2:8238739/93‑1 (MQ=255)
                         tGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTc                                                                <  2:1918056/93‑1 (MQ=255)
                         tGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTc                                                                >  2:806322/1‑93 (MQ=255)
                         tGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTc                                                                <  1:2681418/93‑1 (MQ=255)
                          gACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCg                                                               <  2:6572895/93‑1 (MQ=255)
                             gCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCg                                                            >  2:4314081/1‑93 (MQ=255)
                              ccgaatatCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGt                                                           <  1:551408/89‑1 (MQ=255)
                               cTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTg                                                          <  1:5884126/93‑1 (MQ=255)
                               cTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTg                                                          <  2:1011565/93‑1 (MQ=255)
                               cTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTg                                                          <  1:2284167/93‑1 (MQ=255)
                                tGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTgg                                                         <  1:5391387/93‑1 (MQ=255)
                                tGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTgg                                                         >  1:6848809/1‑93 (MQ=255)
                                 gATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGa                                                        >  2:5189400/1‑93 (MQ=255)
                                  atatCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGat                                                       >  1:9981850/1‑93 (MQ=255)
                                   tatCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGata                                                      >  1:2100241/1‑93 (MQ=255)
                                   tatCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGata                                                      >  2:5075617/1‑93 (MQ=255)
                                    atCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGatat                                                     <  1:4244859/93‑1 (MQ=255)
                                     tCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATAtt                                                    >  2:4228142/1‑93 (MQ=255)
                                         gCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCtt                                                >  1:2464847/1‑93 (MQ=255)
                                            tAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATg                                             >  1:8256079/1‑93 (MQ=255)
                                            tAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATg                                             >  1:7188468/1‑93 (MQ=255)
                                              aCTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGct                                           <  2:1815654/93‑1 (MQ=255)
                                                ttATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGctct                                         <  2:4864623/93‑1 (MQ=255)
                                                 tATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGctctc                                        >  2:8184565/1‑93 (MQ=255)
                                                 tATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGctctc                                        <  2:3289832/93‑1 (MQ=255)
                                                 tATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGctctc                                        <  2:6467160/93‑1 (MQ=255)
                                                 tATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGctctc                                        >  2:879809/1‑93 (MQ=255)
                                                   ttttGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTa                                      <  1:7835928/93‑1 (MQ=255)
                                                   ttttGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTa                                      <  2:2113628/93‑1 (MQ=255)
                                                    tttGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTAc                                     >  2:5609048/1‑93 (MQ=255)
                                                    tttGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTAc                                     <  1:7866537/93‑1 (MQ=255)
                                                      tGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCa                                   <  2:2443950/93‑1 (MQ=255)
                                                       gTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCAt                                  <  1:2993132/93‑1 (MQ=255)
                                                       gTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCAt                                  <  2:7138313/93‑1 (MQ=255)
                                                        tACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATg                                 <  1:9142913/93‑1 (MQ=255)
                                                         aCTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGc                                <  2:6718307/93‑1 (MQ=255)
                                                           tGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGctc                              >  1:3809440/1‑93 (MQ=255)
                                                           tGCCTACATTATGATCAATTATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGcac                              <  1:8980121/93‑3 (MQ=255)
                                                             ccTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGctctc                            >  2:9562449/1‑93 (MQ=255)
                                                             ccTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGctctc                            <  1:1765942/93‑1 (MQ=255)
                                                                aCATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGt                         >  2:8588430/1‑93 (MQ=255)
                                                                aCATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGt                         <  2:1442626/93‑1 (MQ=255)
                                                                 cATTATGCTTAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTa                        <  1:322944/93‑1 (MQ=255)
                                                                 cATTATGCTCAATAATTAATGGGGTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATCCTCTCTGTa                        >  1:2790427/1‑93 (MQ=255)
                                                                  aTTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAg                       >  1:8002762/1‑93 (MQ=255)
                                                                  aTTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAg                       >  2:7257795/1‑93 (MQ=255)
                                                                   ttATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGa                      >  2:2660827/1‑93 (MQ=255)
                                                                   ttATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGa                      <  2:1688829/93‑1 (MQ=255)
                                                                   ttATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCGTCGGCGTGGATATTTCTTATGCTCTCTACCTTGCTCTCTGTAGa                      <  1:6717087/93‑1 (MQ=255)
                                                                    tATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAt                     <  2:542980/93‑1 (MQ=255)
                                                                    tATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAt                     >  2:1655635/1‑93 (MQ=255)
                                                                    tATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAt                     >  1:5764098/1‑93 (MQ=255)
                                                                    tATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAt                     <  1:7295225/93‑1 (MQ=255)
                                                                    tATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAt                     >  2:4405300/1‑93 (MQ=255)
                                                                    tATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAt                     <  1:9505169/93‑1 (MQ=255)
                                                                     aTGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATg                    >  2:5999102/1‑93 (MQ=255)
                                                                      tGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGc                   <  2:8333478/93‑1 (MQ=255)
                                                                       gCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGcc                  >  2:9140994/1‑93 (MQ=255)
                                                                       gCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGcc                  >  2:4742316/1‑93 (MQ=255)
                                                                        cTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCa                 <  2:5792219/93‑1 (MQ=255)
                                                                        cTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCa                 <  1:1006393/93‑1 (MQ=255)
                                                                        cTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCa                 <  1:7663257/93‑1 (MQ=255)
                                                                         ccAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAg                <  1:3478094/92‑1 (MQ=255)
                                                                             taattaatGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGcgcg            >  1:4896880/1‑93 (MQ=255)
                                                                              aattaatGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCgcga           >  1:4460462/1‑93 (MQ=255)
                                                                              aattaatGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCgcga           >  2:317237/1‑93 (MQ=255)
                                                                               attaatGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCgcgag          <  1:1849862/93‑1 (MQ=255)
                                                                               attaatGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCgcgag          <  2:3788437/93‑1 (MQ=255)
                                                                                  aatGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCgcgagcga       <  2:6991003/93‑1 (MQ=255)
                                                                                   atGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCgaa      <  2:4627904/93‑1 (MQ=255)
                                                                                   atGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCgaa      <  2:3950183/93‑1 (MQ=255)
                                                                                      ggTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCgaatga   <  1:6285008/93‑1 (MQ=255)
                                                                                      ggTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCgaatga   >  1:9299516/1‑93 (MQ=255)
                                                                                       gTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCgaatgaa  <  1:1174903/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAA  >  NC_000913/1216330‑1216509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 211 total aligned reads displayed.
AGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATGG  >  NC_000913/1216327‑1216512
                                                                                             |                                                                                            
AGAGTGGAGAGTTCTCGCTCTCCATTCTTGACCCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTG                                                                                              <  SRR4302540.5073735/94‑1 (MQ=60)
AGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTG                                                                                              <  SRR4302540.9407934/94‑1 (MQ=60)
 GAATGGAGCGTTCTCGCTCTCCATTCTTGACGCCTGATACCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGG                                                                                             <  SRR4302540.7730015/94‑1 (MQ=60)
 GAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGG                                                                                             <  SRR4302540.9766483/94‑1 (MQ=60)
 AAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGG                                                                                             <  SRR4302540.7730013/94‑1 (MQ=60)
  AATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGA                                                                                            <  SRR4302540.8350504/94‑1 (MQ=60)
  AATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGA                                                                                            >  SRR4302540.4393700/1‑94 (MQ=60)
   ATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGAT                                                                                           <  SRR4302540.7563527/94‑1 (MQ=60)
   ATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGAT                                                                                           <  SRR4302540.5332057/94‑1 (MQ=60)
   ATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGAT                                                                                           <  SRR4302540.6619432/94‑1 (MQ=60)
   ATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGAT                                                                                           <  SRR4302540.6579515/94‑1 (MQ=60)
   ATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGAT                                                                                           >  SRR4302540.4129670/1‑94 (MQ=60)
   ATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGAT                                                                                           <  SRR4302540.2734983/94‑1 (MQ=60)
    TGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATCTCCCGCCTAACTTATTTTGTCATGCCTACATCATGCTCCATAATTACTGGGATAGATA                                                                                          >  SRR4302540.1347888/1‑94 (MQ=60)
    TGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATC                                                                                          <  SRR4302540.2834043/94‑1 (MQ=60)
     GGATAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCA                                                                                         <  SRR4302540.5204355/94‑1 (MQ=60)
     GGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCA                                                                                         >  SRR4302540.10067191/1‑94 (MQ=60)
     GGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCA                                                                                         <  SRR4302540.1796484/94‑1 (MQ=60)
     GGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCA                                                                                         <  SRR4302540.9729261/94‑1 (MQ=60)
      GAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAA                                                                                        >  SRR4302540.78524/1‑94 (MQ=60)
        GAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGA                                                                                      >  SRR4302540.8666448/1‑94 (MQ=60)
         ATNTCTCGCNCTCCATTCTTGNNGCNTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGAT                                                                                     <  SRR4302540.266809/94‑1 (MQ=60)
         AGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGAT                                                                                     <  SRR4302540.3525774/94‑1 (MQ=60)
         AGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGAT                                                                                     <  SRR4302540.5104754/94‑1 (MQ=60)
         AGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGAT                                                                                     <  SRR4302540.6321366/94‑1 (MQ=60)
         AGTTCTCCCCCTCCTTTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGAT                                                                                     <  SRR4302540.8954166/94‑1 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    >  SRR4302540.5492124/1‑94 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    >  SRR4302540.6691227/1‑94 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    >  SRR4302540.3389818/1‑94 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    >  SRR4302540.5352094/1‑94 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    >  SRR4302540.501506/1‑94 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    >  SRR4302540.4107600/1‑94 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    >  SRR4302540.8944619/1‑94 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    >  SRR4302540.8446828/1‑94 (MQ=60)
          GTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGCTGGATCAAGATG                                                                                    >  SRR4302540.8446829/1‑94 (MQ=60)
          GTTATCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    <  SRR4302540.3380506/94‑1 (MQ=60)
          GTTATCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATG                                                                                    <  SRR4302540.3380505/94‑1 (MQ=60)
             CTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAG                                                                                 <  SRR4302540.4933435/94‑1 (MQ=60)
             CTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAG                                                                                 >  SRR4302540.5254067/1‑94 (MQ=60)
               CGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAA                                                                               <  SRR4302540.1397185/94‑1 (MQ=60)
               CGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAA                                                                               >  SRR4302540.7378841/1‑94 (MQ=60)
               CGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAA                                                                               <  SRR4302540.3668572/94‑1 (MQ=60)
               CGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAA                                                                               <  SRR4302540.5927598/94‑1 (MQ=60)
                 CTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAA                                                                             >  SRR4302540.9434582/1‑94 (MQ=60)
                   CTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATT                                                                           >  SRR4302540.1530326/1‑94 (MQ=60)
                   CTCCATTCTGGACGCCTAATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATT                                                                           <  SRR4302540.225913/94‑1 (MQ=60)
                       ATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAACATTTTAT                                                                       >  SRR4302540.9155046/1‑94 (MQ=60)
                       ATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTAT                                                                       >  SRR4302540.7062621/1‑94 (MQ=60)
                       ATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTAT                                                                       <  SRR4302540.4037525/94‑1 (MQ=60)
                       ATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTAT                                                                       >  SRR4302540.9192892/1‑94 (MQ=60)
                        TTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATC                                                                      <  SRR4302540.7487229/94‑1 (MQ=60)
                        TTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATC                                                                      <  SRR4302540.9749217/94‑1 (MQ=60)
                         TCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCT                                                                     <  SRR4302540.5317015/94‑1 (MQ=60)
                           TTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTC                                                                   <  SRR4302540.5125031/94‑1 (MQ=60)
                           TTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTC                                                                   <  SRR4302540.2131578/94‑1 (MQ=60)
                           TTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTC                                                                   <  SRR4302540.7076192/94‑1 (MQ=60)
                            TGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCG                                                                  <  SRR4302540.1259211/94‑1 (MQ=60)
                            TGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCG                                                                  >  SRR4302540.4794813/1‑94 (MQ=60)
                            TGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCG                                                                  <  SRR4302540.2710416/94‑1 (MQ=60)
                             tactCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGG                                                                 <  SRR4302540.7937511/90‑1 (MQ=60)
                             acCGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGG                                                                 <  SRR4302540.4027876/92‑1 (MQ=60)
                             GACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGG                                                                 <  SRR4302540.7937512/94‑1 (MQ=60)
                             GACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATAAAGATGGAGAAAATTTTATCTTCGC                                                                 >  SRR4302540.431022/1‑94 (MQ=60)
                              ACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGC                                                                >  SRR4302540.6909037/1‑94 (MQ=60)
                               CGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCG                                                               >  SRR4302540.821770/1‑94 (MQ=60)
                                GCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGT                                                              >  SRR4302540.3223092/1‑94 (MQ=60)
                                 ccgaATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTG                                                             <  SRR4302540.557421/90‑1 (MQ=60)
                                 CCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTG                                                             <  SRR4302540.10076862/94‑1 (MQ=60)
                                  CTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGG                                                            >  SRR4302540.786450/1‑94 (MQ=60)
                                  CTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGG                                                            <  SRR4302540.2308718/94‑1 (MQ=60)
                                  CTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGG                                                            <  SRR4302540.5949141/94‑1 (MQ=60)
                                  CTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGATGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGG                                                            >  SRR4302540.8500959/1‑94 (MQ=60)
                                   TGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGA                                                           >  SRR4302540.8071690/1‑94 (MQ=60)
                                   TGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGA                                                           <  SRR4302540.5450676/94‑1 (MQ=60)
                                   TGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGA                                                           >  SRR4302540.6669629/1‑94 (MQ=60)
                                    GATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGAT                                                          <  SRR4302540.3424826/94‑1 (MQ=60)
                                    GATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGAT                                                          >  SRR4302540.10098237/1‑94 (MQ=60)
                                     ATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATA                                                         <  SRR4302540.555139/94‑1 (MQ=60)
                                     ATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATA                                                         >  SRR4302540.2122787/1‑94 (MQ=60)
                                      TATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATAT                                                        <  SRR4302540.3077273/94‑1 (MQ=60)
                                       ATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATT                                                       <  SRR4302540.4291043/94‑1 (MQ=60)
                                       ATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATT                                                       >  SRR4302540.3475537/1‑94 (MQ=60)
                                        TCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTT                                                      <  SRR4302540.8373411/94‑1 (MQ=60)
                                         CCCGCCTAACTTATTTTGTACTTCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTC                                                     >  SRR4302540.1799593/1‑94 (MQ=60)
                                         CCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTC                                                     >  SRR4302540.5107483/1‑94 (MQ=60)
                                          CCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCT                                                    <  SRR4302540.6655742/94‑1 (MQ=60)
                                           CGCCTATCTTATTTTGTACTGCCTACATTATGCTAAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTT                                                   <  SRR4302540.9561985/94‑1 (MQ=60)
                                           CGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCACGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTT                                                   >  SRR4302540.1766923/1‑94 (MQ=60)
                                           CGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTT                                                   <  SRR4302540.3965514/94‑1 (MQ=60)
                                           CGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTT                                                   >  SRR4302540.2491378/1‑94 (MQ=60)
                                            GCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTA                                                  >  SRR4302540.6909528/1‑94 (MQ=60)
                                             CCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTAT                                                 <  SRR4302540.7727689/94‑1 (MQ=60)
                                             CCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTAT                                                 <  SRR4302540.1009273/94‑1 (MQ=60)
                                             CCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTAT                                                 <  SRR4302540.6516129/94‑1 (MQ=60)
                                             CCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTAT                                                 <  SRR4302540.3678416/94‑1 (MQ=60)
                                             CCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTAT                                                 <  SRR4302540.5823453/94‑1 (MQ=60)
                                              CTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATG                                                <  SRR4302540.1929029/94‑1 (MQ=60)
                                              CTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATG                                                >  SRR4302540.7268599/1‑94 (MQ=60)
                                              CTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATG                                                >  SRR4302540.8352029/1‑94 (MQ=60)
                                              CTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATG                                                >  SRR4302540.10044368/1‑94 (MQ=60)
                                               TAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGC                                               >  SRR4302540.7047247/1‑94 (MQ=60)
                                               TAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGC                                               >  SRR4302540.9369714/1‑94 (MQ=60)
                                               TAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGC                                               >  SRR4302540.9369715/1‑94 (MQ=60)
                                                 ACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTC                                             >  SRR4302540.2181470/1‑94 (MQ=60)
                                                 ACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTC                                             <  SRR4302540.7319774/94‑1 (MQ=60)
                                                 ACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTC                                             >  SRR4302540.4167255/1‑94 (MQ=60)
                                                 ACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTC                                             <  SRR4302540.267294/94‑1 (MQ=60)
                                                  CTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCT                                            >  SRR4302540.4334867/1‑94 (MQ=60)
                                                   TTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTC                                           >  SRR4302540.7419619/1‑94 (MQ=60)
                                                   TTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTC                                           >  SRR4302540.8951878/1‑94 (MQ=60)
                                                   TTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTC                                           >  SRR4302540.2015087/1‑94 (MQ=60)
                                                    TATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCT                                          >  SRR4302540.3687714/1‑94 (MQ=60)
                                                    TATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCT                                          >  SRR4302540.3577010/1‑94 (MQ=60)
                                                     ATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTA                                         >  SRR4302540.8498640/1‑94 (MQ=60)
                                                      TTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTAC                                        <  SRR4302540.7927482/94‑1 (MQ=60)
                                                      TTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTAC                                        <  SRR4302540.7927483/94‑1 (MQ=60)
                                                       TTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACC                                       <  SRR4302540.7958438/94‑1 (MQ=60)
                                                        TTGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCA                                      >  SRR4302540.10073125/1‑94 (MQ=60)
                                                         TGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCAT                                     <  SRR4302540.4125268/94‑1 (MQ=60)
                                                         TGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCAT                                     <  SRR4302540.9426154/94‑1 (MQ=60)
                                                         TGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCAT                                     <  SRR4302540.1054271/94‑1 (MQ=60)
                                                         TGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCAT                                     <  SRR4302540.107903/94‑1 (MQ=60)
                                                         TGTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCAT                                     <  SRR4302540.1240712/94‑1 (MQ=60)
                                                          GTACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATG                                    <  SRR4302540.3026129/94‑1 (MQ=60)
                                                           TACTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGC                                   <  SRR4302540.9252747/94‑1 (MQ=60)
                                                            ACTGCCTACATTATGCTCAATAATTAATGGGGTGGATCACGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTCTGCTCTGTACCATGCT                                  >  SRR4302540.26966/1‑94 (MQ=60)
                                                             CTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTC                                 >  SRR4302540.7423781/1‑94 (MQ=60)
                                                             CTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTC                                 <  SRR4302540.9737454/94‑1 (MQ=60)
                                                             CTGCCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTC                                 >  SRR4302540.3850929/1‑94 (MQ=60)
                                                              TGCCTACATTATGATCAATTATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCACT                                <  SRR4302540.9087131/94‑1 (MQ=60)
                                                              TGCCTACATGATGCTCCATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTACCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCT                                <  SRR4302540.7905106/94‑1 (MQ=60)
                                                                CCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCT                              <  SRR4302540.9378051/94‑1 (MQ=60)
                                                                CCTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCT                              <  SRR4302540.1785094/94‑1 (MQ=60)
                                                                 CTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTG                             >  SRR4302540.2524524/1‑94 (MQ=60)
                                                                 CTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTG                             <  SRR4302540.2613620/94‑1 (MQ=60)
                                                                 CTACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTG                             <  SRR4302540.5868014/94‑1 (MQ=60)
                                                                  TACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGT                            >  SRR4302540.9130802/1‑94 (MQ=60)
                                                                  TACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGT                            >  SRR4302540.9130803/1‑94 (MQ=60)
                                                                  TACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGT                            <  SRR4302540.7122017/94‑1 (MQ=60)
                                                                   ACATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTA                           >  SRR4302540.2820557/1‑94 (MQ=60)
                                                                   ACATTATGCTCAATAATTAATGGGGTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATCCTCTCTGTA                           >  SRR4302540.2820556/1‑94 (MQ=60)
                                                                    CATTATGCTTAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAG                          <  SRR4302540.326173/94‑1 (MQ=60)
                                                                    CATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAG                          >  SRR4302540.8095902/1‑94 (MQ=60)
                                                                    CATTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAG                          >  SRR4302540.2651226/1‑94 (MQ=60)
                                                                      TTATGCTCAATAATTAATGGGTTTGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAT                        <  SRR4302540.7977168/94‑1 (MQ=60)
                                                                      TTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAT                        <  SRR4302540.5533806/94‑1 (MQ=60)
                                                                      TTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAT                        <  SRR4302540.7977167/94‑1 (MQ=60)
                                                                      TTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAT                        >  SRR4302540.5827744/1‑94 (MQ=60)
                                                                      TTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGAT                        <  SRR4302540.198902/94‑1 (MQ=60)
                                                                      TTATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCGTCGGCGTGGATATTTCTTATGCTCTCTACCTTGCTCTCTGTAGAT                        <  SRR4302540.6791191/94‑1 (MQ=60)
                                                                       TATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATG                       <  SRR4302540.2378702/94‑1 (MQ=60)
                                                                       TATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATG                       <  SRR4302540.9617783/94‑1 (MQ=60)
                                                                       TATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATG                       <  SRR4302540.7376642/94‑1 (MQ=60)
                                                                       TATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATA                       <  SRR4302540.3589572/94‑1 (MQ=60)
                                                                       TATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTATATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATG                       <  SRR4302540.9617784/94‑1 (MQ=60)
                                                                        ATGCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGC                      >  SRR4302540.6190060/1‑94 (MQ=60)
                                                                          GCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCA                    <  SRR4302540.7286447/94‑1 (MQ=60)
                                                                          GCTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCA                    <  SRR4302540.5713377/94‑1 (MQ=60)
                                                                           CTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAG                   >  SRR4302540.268976/1‑94 (MQ=60)
                                                                           CTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAG                   <  SRR4302540.9176625/94‑1 (MQ=60)
                                                                           CTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAG                   <  SRR4302540.7749569/94‑1 (MQ=60)
                                                                           CTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAG                   <  SRR4302540.1390189/94‑1 (MQ=60)
                                                                           CTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAG                   <  SRR4302540.1016598/94‑1 (MQ=60)
                                                                           CTCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATACTCTCTGTAGATGCCAG                   >  SRR4302540.7148152/1‑94 (MQ=60)
                                                                            TCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGC                  <  SRR4302540.5642580/94‑1 (MQ=60)
                                                                            TCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGC                  <  SRR4302540.3743105/94‑1 (MQ=60)
                                                                            TCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGC                  <  SRR4302540.2323027/94‑1 (MQ=60)
                                                                            CCAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGC                  <  SRR4302540.3515962/94‑1 (MQ=60)
                                                                             CAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCG                 >  SRR4302540.5010452/1‑94 (MQ=60)
                                                                             CAATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCG                 >  SRR4302540.2808621/1‑94 (MQ=60)
                                                                              AATAATTAATGGGTTGGATCTAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGC                >  SRR4302540.9854615/1‑94 (MQ=60)
                                                                              AATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGC                <  SRR4302540.6425607/94‑1 (MQ=60)
                                                                               ATAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCG               >  SRR4302540.4949554/1‑94 (MQ=60)
                                                                                TAATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGA              >  SRR4302540.4508819/1‑94 (MQ=60)
                                                                                  ATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGC            >  SRR4302540.6269050/1‑94 (MQ=60)
                                                                                  ATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGC            <  SRR4302540.1870149/94‑1 (MQ=60)
                                                                                  ATTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGC            <  SRR4302540.1390815/94‑1 (MQ=60)
                                                                                   TTAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCG           <  SRR4302540.7342249/94‑1 (MQ=60)
                                                                                    TAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGA          <  SRR4302540.8404332/94‑1 (MQ=60)
                                                                                    TAATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGA          >  SRR4302540.1356518/1‑94 (MQ=60)
                                                                                     AATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAA         <  SRR4302540.703120/94‑1 (MQ=60)
                                                                                     AATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAA         <  SRR4302540.9127837/94‑1 (MQ=60)
                                                                                     AATGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAA         <  SRR4302540.7238282/94‑1 (MQ=60)
                                                                                       TGGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATG       >  SRR4302540.3461495/1‑94 (MQ=60)
                                                                                        GGGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGA      >  SRR4302540.9410607/1‑94 (MQ=60)
                                                                                         GGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAA     >  SRR4302540.2843930/1‑94 (MQ=60)
                                                                                         GGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAA     <  SRR4302540.3295024/94‑1 (MQ=60)
                                                                                         GGTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAA     <  SRR4302540.6354957/94‑1 (MQ=60)
                                                                                          GTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAAT    <  SRR4302540.1856400/94‑1 (MQ=60)
                                                                                          GTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAAT    <  SRR4302540.10091090/94‑1 (MQ=60)
                                                                                          GTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAAT    <  SRR4302540.1187046/94‑1 (MQ=60)
                                                                                          GTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAAT    <  SRR4302540.8145918/94‑1 (MQ=60)
                                                                                          GTTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAAT    <  SRR4302540.1209816/94‑1 (MQ=60)
                                                                                           TTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATG   <  SRR4302540.3558744/94‑1 (MQ=60)
                                                                                           TTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATG   >  SRR4302540.736607/1‑94 (MQ=60)
                                                                                           TTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATG   >  SRR4302540.3066931/1‑94 (MQ=60)
                                                                                           TTGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATG   <  SRR4302540.6859746/94‑1 (MQ=60)
                                                                                            TGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATGG  <  SRR4302540.8852425/94‑1 (MQ=60)
                                                                                            TGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATGG  >  SRR4302540.6013512/1‑94 (MQ=60)
                                                                                            TGGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATGG  >  SRR4302540.2083643/1‑94 (MQ=60)
                                                                                             |                                                                                            
AGAATGGAGAGTTCTCGCTCTCCATTCTTGACGCCTGATATCCCGCCTAACTTATTTTGTACTGCCTACATTATGCTCAATAATTAATGGGTTAGATCAAGATGGAGAAAATTTTATCTTCGGCGTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATGG  >  NC_000913/1216327‑1216512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: