Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,222,734 T→C intergenic (‑583/‑184) b1172 ← / → b1173 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,222,7340TC99.7% 942.2 / ‑5.2 291intergenic (‑583/‑184)b1172/b1173hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (108/182);  total (109/182)
Fisher's exact test for biased strand distribution p-value = 3.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01

Only 100 of 316 total aligned reads displayed.

TTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGTCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCG  >  NC_000913/1222644‑1222823
                                                                                          |                                                                                         
ttATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCctggcct                                                                                         <  2:9121225/93‑1 (MQ=255)
ttATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCctggcct                                                                                         >  1:2227560/1‑93 (MQ=255)
   tGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCctggcctggt                                                                                      >  2:3400503/1‑93 (MQ=255)
      gggATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGcc                                                                                   <  2:4565404/93‑1 (MQ=255)
      gggATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGcc                                                                                   <  2:8554962/93‑1 (MQ=255)
       ggATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGCATCCCCTGGCCTGGTGCCt                                                                                  >  1:1905965/1‑93 (MQ=255)
        gATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTg                                                                                 <  1:8411287/93‑1 (MQ=255)
        gATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTg                                                                                 <  1:5147125/93‑1 (MQ=255)
        gATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTg                                                                                 <  2:5663569/93‑1 (MQ=255)
        gATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTg                                                                                 >  2:1465744/1‑93 (MQ=255)
         atatCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGc                                                                                <  2:3626670/93‑1 (MQ=255)
         atatCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGc                                                                                >  1:4307312/1‑93 (MQ=255)
          tatCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCg                                                                               <  1:5882295/93‑1 (MQ=255)
           atcatcATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCgg                                                                              >  1:7328108/1‑93 (MQ=255)
            tcatcaTTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGTCTGGTGCCTGCggg                                                                             >  1:9697857/1‑93 (MQ=255)
              atcatTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCt                                                                           >  1:8329748/1‑93 (MQ=255)
              atcatTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCt                                                                           <  2:6917871/93‑1 (MQ=255)
               tcatTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTg                                                                          >  2:2851462/1‑93 (MQ=255)
                catTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCCGGATGAACCCCCTGGCCTGGTGCCTGCGGGCTGa                                                                         >  1:7215780/1‑93 (MQ=255)
                catTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGa                                                                         <  2:2404411/93‑1 (MQ=255)
                  tttCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATg                                                                       <  2:4308458/93‑1 (MQ=255)
                  tttCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATg                                                                       >  2:2055011/1‑93 (MQ=255)
                   ttCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGt                                                                      <  2:2977931/93‑1 (MQ=255)
                   ttCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGt                                                                      <  2:450403/93‑1 (MQ=255)
                   ttCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGt                                                                      <  1:5463528/93‑1 (MQ=255)
                   ttCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGt                                                                      <  2:922592/93‑1 (MQ=255)
                    tcatcaTGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGtt                                                                     <  2:6325003/93‑1 (MQ=255)
                     catcatGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTg                                                                    <  2:6090082/93‑1 (MQ=255)
                     catcatGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTg                                                                    >  1:8033264/1‑93 (MQ=255)
                     catcatGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTg                                                                    >  2:7749959/1‑93 (MQ=255)
                      atcatGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTgc                                                                   <  1:2957720/93‑1 (MQ=255)
                        catGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTgcag                                                                 >  2:7581628/1‑93 (MQ=255)
                          tgatgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTgcagca                                                               <  2:1083111/93‑1 (MQ=255)
                          tgatgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTgcagca                                                               <  1:7421852/93‑1 (MQ=255)
                          tgatgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTgcagca                                                               <  1:9479238/93‑1 (MQ=255)
                          tgatgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTgcagca                                                               <  1:8706511/93‑1 (MQ=255)
                          tgatgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTgcagca                                                               <  1:695968/93‑1 (MQ=255)
                           gatgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGcagcag                                                              <  1:7766680/93‑1 (MQ=255)
                            atgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGcagcagg                                                             >  1:6538467/1‑92 (MQ=255)
                            atgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCaga                                                             >  1:9170822/1‑93 (MQ=255)
                            atgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCaga                                                             <  1:9842385/93‑1 (MQ=255)
                            atgTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCaga                                                             >  1:4900963/1‑93 (MQ=255)
                                cTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCtt                                                         >  1:2412043/1‑93 (MQ=255)
                                 tttGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTa                                                        <  2:2247422/93‑1 (MQ=255)
                                 tttGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTa                                                        >  1:608000/1‑93 (MQ=255)
                                   tGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAgg                                                      >  1:7582218/1‑93 (MQ=255)
                                   tGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAgg                                                      <  2:822122/93‑1 (MQ=255)
                                     gTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTc                                                    <  1:448980/93‑1 (MQ=255)
                                     gTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTc                                                    <  1:1537903/93‑1 (MQ=255)
                                       gAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCAc                                                  <  1:9066787/93‑1 (MQ=255)
                                        aGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACt                                                 <  2:7528330/93‑1 (MQ=255)
                                         gCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACtt                                                >  1:3257152/1‑93 (MQ=255)
                                          cGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTa                                               <  2:5477506/93‑1 (MQ=255)
                                          cGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTa                                               <  2:1995870/93‑1 (MQ=255)
                                            gggAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGCGCTTAGGTCACTTAgc                                             >  1:5585813/3‑92 (MQ=255)
                                            gTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGa                                             <  2:5162658/93‑1 (MQ=255)
                                            gTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGa                                             <  2:1125425/93‑1 (MQ=255)
                                            gTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGa                                             <  2:9401438/93‑1 (MQ=255)
                                            gTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGa                                             <  2:5921551/93‑1 (MQ=255)
                                             tGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGAc                                            >  1:3419029/1‑93 (MQ=255)
                                               aaCACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGc                                          <  1:3035336/93‑1 (MQ=255)
                                                acacAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGct                                         <  2:3810712/93‑1 (MQ=255)
                                                  acaATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGctac                                       <  2:825569/93‑1 (MQ=255)
                                                    aaTACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGctacta                                     <  2:9831266/93‑1 (MQ=255)
                                                      tACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATc                                   <  2:6204534/93‑1 (MQ=255)
                                                        cacCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCAt                                 <  2:3923274/93‑1 (MQ=255)
                                                         acCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCAtt                                >  2:4545890/1‑93 (MQ=255)
                                                          ccTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCAttt                               >  1:6804827/1‑93 (MQ=255)
                                                            tGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTAt                             <  1:1263009/93‑1 (MQ=255)
                                                            tGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTAt                             <  2:7341390/93‑1 (MQ=255)
                                                            tGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTAt                             >  1:4594367/1‑93 (MQ=255)
                                                             gcgcTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATc                            >  1:10019753/1‑93 (MQ=255)
                                                             gcgcTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATc                            >  1:554388/1‑93 (MQ=255)
                                                              cgcTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATcc                           <  1:1841027/93‑1 (MQ=255)
                                                               gcTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCa                          >  1:5987976/1‑93 (MQ=255)
                                                               gcTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCa                          >  1:2075344/1‑93 (MQ=255)
                                                                cTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCaa                         <  1:9579330/93‑1 (MQ=255)
                                                                cTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCaa                         <  2:8919109/93‑1 (MQ=255)
                                                                     tctTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCa                    >  1:3528494/1‑93 (MQ=255)
                                                                      ctTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCAt                   >  2:7948357/1‑93 (MQ=255)
                                                                      ctTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCAt                   >  1:6823282/1‑93 (MQ=255)
                                                                       ttCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATg                  <  1:2796246/93‑1 (MQ=255)
                                                                        tCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATgg                 >  1:5397002/1‑93 (MQ=255)
                                                                        tCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATgg                 <  2:9440767/93‑1 (MQ=255)
                                                                           ggATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAAt              <  1:4036024/93‑1 (MQ=255)
                                                                           ggATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAAt              >  1:3108292/1‑93 (MQ=255)
                                                                            gATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATc             <  1:3636096/93‑1 (MQ=255)
                                                                              tGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGa           <  1:3673021/93‑1 (MQ=255)
                                                                              tGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGa           >  1:7467757/1‑93 (MQ=255)
                                                                                aaTCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGaaa         >  2:183288/1‑93 (MQ=255)
                                                                                aaTCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGaaa         <  2:4105601/93‑1 (MQ=255)
                                                                                 aTCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGATCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAAt        <  2:9656907/93‑1 (MQ=255)
                                                                                  tCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATc       <  2:8480225/93‑1 (MQ=255)
                                                                                   ccccTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGGAATCa      <  1:5732519/93‑1 (MQ=255)
                                                                                    cccTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAg     <  1:194511/93‑1 (MQ=255)
                                                                                     cctggcctggTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGt    <  2:8998713/93‑1 (MQ=255)
                                                                                      ctggcctggtGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTc   <  1:5829047/93‑1 (MQ=255)
                                                                                      ctggcctggtGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTc   <  2:6515149/93‑1 (MQ=255)
                                                                                       tggcctggtGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCg  >  1:2575270/1‑93 (MQ=255)
                                                                                       tggcctggtGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCg  >  2:7095472/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGTCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCG  >  NC_000913/1222644‑1222823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTCTTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGTCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCGATAC  >  NC_000913/1222641‑1222827
                                                                                             |                                                                                             
TTCTTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGC                                                                                               <  SRR4302540.7124460/94‑1 (MQ=39)
TTCTTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGC                                                                                               >  SRR4302540.6221518/1‑94 (MQ=39)
 TCTTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCC                                                                                              >  SRR4302540.1263113/1‑94 (MQ=39)
  CTTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCT                                                                                             >  SRR4302540.901583/1‑94 (MQ=38)
  CTTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCT                                                                                             >  SRR4302540.2251557/1‑94 (MQ=38)
   TTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTG                                                                                            <  SRR4302540.3126516/94‑1 (MQ=38)
    TATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGG                                                                                           <  SRR4302540.186124/94‑1 (MQ=38)
     ATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGT                                                                                          >  SRR4302540.2422964/1‑94 (MQ=38)
         GGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGCATCCCCTGGCCTGGTGCCT                                                                                      >  SRR4302540.1926797/1‑94 (MQ=31)
         GGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCT                                                                                      <  SRR4302540.7237347/94‑1 (MQ=33)
          GGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTG                                                                                     >  SRR4302540.21116/1‑94 (MQ=30)
          GGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTG                                                                                     <  SRR4302540.9187469/94‑1 (MQ=30)
           GATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGC                                                                                    <  SRR4302540.8508914/94‑1 (MQ=30)
           GATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGC                                                                                    <  SRR4302540.5202893/94‑1 (MQ=30)
           GATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGC                                                                                    >  SRR4302540.4354192/1‑94 (MQ=30)
            ATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCG                                                                                   >  SRR4302540.10106149/1‑94 (MQ=30)
             TATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGG                                                                                  >  SRR4302540.6163807/1‑94 (MQ=33)
             TATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGG                                                                                  >  SRR4302540.7409925/1‑94 (MQ=33)
             TATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGG                                                                                  >  SRR4302540.5982572/1‑94 (MQ=33)
             TATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGG                                                                                  <  SRR4302540.5947300/94‑1 (MQ=33)
             TATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGG                                                                                  <  SRR4302540.5601105/94‑1 (MQ=33)
             TATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGG                                                                                  >  SRR4302540.4142227/1‑94 (MQ=33)
              ATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGTCTGGTGCCTGCGGG                                                                                 >  SRR4302540.9811879/1‑94 (MQ=37)
              ATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGG                                                                                 >  SRR4302540.6048264/1‑94 (MQ=35)
              ATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGG                                                                                 >  SRR4302540.533290/1‑94 (MQ=35)
               TCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGC                                                                                <  SRR4302540.5612153/94‑1 (MQ=38)
                CATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCT                                                                               >  SRR4302540.8426428/1‑94 (MQ=38)
                CATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCT                                                                               <  SRR4302540.5310087/94‑1 (MQ=38)
                 ATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTG                                                                              >  SRR4302540.1969591/1‑94 (MQ=38)
                 ATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTG                                                                              >  SRR4302540.7108625/1‑94 (MQ=38)
                  TCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCCGGATGAACCCCCTGGCCTGGTGCCTGCGGGCTGA                                                                             >  SRR4302540.7296214/1‑94 (MQ=35)
                  TCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGA                                                                             >  SRR4302540.7296216/1‑94 (MQ=38)
                  TCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGA                                                                             <  SRR4302540.7566724/94‑1 (MQ=38)
                  TCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGA                                                                             >  SRR4302540.4009665/1‑94 (MQ=38)
                  TCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGA                                                                             >  SRR4302540.360035/1‑94 (MQ=38)
                   CATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGAT                                                                            <  SRR4302540.7712623/94‑1 (MQ=38)
                   CATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAAGCCCCTGGCCTGGTGCCTGCGGGCTGAT                                                                            <  SRR4302540.1167843/94‑1 (MQ=36)
                    ATTTCATCATGATGTCTTTGGTGAGAGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATG                                                                           >  SRR4302540.2223285/1‑94 (MQ=36)
                    ATTTCATCATGATGGCGTTGGTGAGCGGTGAACACGATACCACTGCGCTTTCTCGTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATG                                                                           <  SRR4302540.6853791/94‑1 (MQ=60)
                     TTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGT                                                                          <  SRR4302540.6042210/94‑1 (MQ=38)
                      TTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTT                                                                         <  SRR4302540.5647307/94‑1 (MQ=38)
                      TTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTT                                                                         <  SRR4302540.9358910/94‑1 (MQ=38)
                      TTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTT                                                                         <  SRR4302540.5523666/94‑1 (MQ=38)
                      TTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTT                                                                         >  SRR4302540.8806562/1‑94 (MQ=38)
                      TTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTT                                                                         >  SRR4302540.8920425/1‑94 (MQ=38)
                       TCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTG                                                                        >  SRR4302540.8126651/1‑94 (MQ=38)
                         CTCATGATGTCTTTGGTGAGCGGTTAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCA                                                                      <  SRR4302540.2990304/94‑1 (MQ=36)
                         ATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCA                                                                      <  SRR4302540.5797691/94‑1 (MQ=38)
                         ATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCA                                                                      <  SRR4302540.6967209/94‑1 (MQ=38)
                         ATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCA                                                                      >  SRR4302540.9736057/1‑94 (MQ=38)
                         ATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCA                                                                      <  SRR4302540.2990303/94‑1 (MQ=38)
                         ATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCA                                                                      >  SRR4302540.9736058/1‑94 (MQ=38)
                          TCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAG                                                                     <  SRR4302540.7472286/94‑1 (MQ=38)
                          TCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAG                                                                     <  SRR4302540.3219130/94‑1 (MQ=38)
                            ATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCA                                                                   <  SRR4302540.6660467/94‑1 (MQ=38)
                             TGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAG                                                                  <  SRR4302540.9591646/94‑1 (MQ=40)
                             TGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAG                                                                  <  SRR4302540.7504523/94‑1 (MQ=40)
                             TGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAG                                                                  <  SRR4302540.3549098/94‑1 (MQ=40)
                             TGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAG                                                                  <  SRR4302540.8807572/94‑1 (MQ=40)
                             TGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAG                                                                  <  SRR4302540.703435/94‑1 (MQ=40)
                              GATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGG                                                                 >  SRR4302540.6611026/1‑94 (MQ=40)
                              GATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGG                                                                 >  SRR4302540.2526509/1‑94 (MQ=40)
                              GATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGA                                                                 >  SRR4302540.9280833/1‑94 (MQ=43)
                              GATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGA                                                                 <  SRR4302540.7857478/94‑1 (MQ=43)
                              GATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGA                                                                 >  SRR4302540.994336/1‑94 (MQ=43)
                              GATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGA                                                                 >  SRR4302540.4953690/1‑94 (MQ=43)
                               ATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAG                                                                <  SRR4302540.9957443/94‑1 (MQ=45)
                               ATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAG                                                                <  SRR4302540.4400890/94‑1 (MQ=45)
                               ATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAG                                                                >  SRR4302540.1507726/1‑94 (MQ=45)
                                TGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGC                                                               >  SRR4302540.2504014/1‑94 (MQ=48)
                                 GTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCT                                                              >  SRR4302540.2817432/1‑94 (MQ=50)
                                  TCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTT                                                             >  SRR4302540.2438045/1‑94 (MQ=53)
                                   CTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTA                                                            >  SRR4302540.614504/1‑94 (MQ=55)
                                   CTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTA                                                            >  SRR4302540.7903110/1‑94 (MQ=55)
                                    TTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAG                                                           <  SRR4302540.5517136/94‑1 (MQ=58)
                                     TTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGG                                                          >  SRR4302540.7667338/1‑94 (MQ=58)
                                     TTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGG                                                          <  SRR4302540.1941779/94‑1 (MQ=58)
                                      TGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGT                                                         <  SRR4302540.6345938/94‑1 (MQ=58)
                                       GGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTC                                                        >  SRR4302540.4753622/1‑94 (MQ=55)
                                        GTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCA                                                       <  SRR4302540.453763/94‑1 (MQ=55)
                                        GTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCA                                                       <  SRR4302540.1554910/94‑1 (MQ=55)
                                        GTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCA                                                       <  SRR4302540.4576905/94‑1 (MQ=55)
                                          GAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACT                                                     <  SRR4302540.9175657/94‑1 (MQ=58)
                                          GAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACT                                                     <  SRR4302540.4072626/94‑1 (MQ=58)
                                           AGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTT                                                    <  SRR4302540.277085/94‑1 (MQ=60)
                                           AGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTT                                                    >  SRR4302540.3292659/1‑94 (MQ=60)
                                              GGGGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGCGCTTAGGTCACTTAGC                                                 >  SRR4302540.5647289/1‑94 (MQ=51)
                                               GTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGAC                                                >  SRR4302540.3456227/1‑94 (MQ=60)
                                               GTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGAC                                                <  SRR4302540.4375022/94‑1 (MQ=60)
                                                  AACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCT                                             <  SRR4302540.3068648/94‑1 (MQ=60)
                                                  AACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCT                                             >  SRR4302540.5937566/1‑94 (MQ=60)
                                                    CACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTAC                                           <  SRR4302540.9552627/94‑1 (MQ=60)
                                                     ACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACT                                          <  SRR4302540.1192586/94‑1 (MQ=60)
                                                     ACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACT                                          >  SRR4302540.7618026/1‑94 (MQ=60)
                                                     ACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACT                                          <  SRR4302540.9902444/94‑1 (MQ=60)
                                                       AATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTAT                                        <  SRR4302540.5600840/94‑1 (MQ=60)
                                                       AATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTAT                                        >  SRR4302540.9252304/1‑94 (MQ=60)
                                                        ATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATC                                       >  SRR4302540.5708732/1‑94 (MQ=60)
                                                         TACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGGGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCA                                      >  SRR4302540.3135808/1‑94 (MQ=60)
                                                          ACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCAT                                     <  SRR4302540.5065152/94‑1 (MQ=60)
                                                           CACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATT                                    >  SRR4302540.7520822/1‑94 (MQ=60)
                                                           CACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGGGCCTGCGGGCTGATTTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATT                                    >  SRR4302540.7520827/1‑94 (MQ=60)
                                                            CCCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTT                                   <  SRR4302540.5824629/94‑1 (MQ=60)
                                                            ACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTT                                   >  SRR4302540.6880124/1‑94 (MQ=60)
                                                            ACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTT                                   >  SRR4302540.6880123/1‑94 (MQ=60)
                                                             CCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTA                                  <  SRR4302540.2241821/94‑1 (MQ=60)
                                                             CCTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTA                                  <  SRR4302540.739137/94‑1 (MQ=60)
                                                              CTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTAT                                 >  SRR4302540.7179431/1‑94 (MQ=60)
                                                              CTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTAT                                 >  SRR4302540.8472676/1‑94 (MQ=60)
                                                              CTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTAT                                 <  SRR4302540.3096344/94‑1 (MQ=60)
                                                              CTGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTAT                                 >  SRR4302540.4643792/1‑94 (MQ=60)
                                                               TGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATC                                >  SRR4302540.10136369/1‑94 (MQ=60)
                                                               TGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATC                                >  SRR4302540.560433/1‑94 (MQ=60)
                                                               TGCGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATC                                <  SRR4302540.1275978/94‑1 (MQ=60)
                                                                 CGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCA                              >  SRR4302540.2097653/1‑94 (MQ=60)
                                                                 CGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCA                              >  SRR4302540.6054301/1‑94 (MQ=60)
                                                                 CGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCA                              <  SRR4302540.1861196/94‑1 (MQ=60)
                                                                 CGCTGTCTCTTCAGGATGAATCCCCTGGCCTGGGGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCA                              <  SRR4302540.9820453/94‑1 (MQ=60)
                                                                  GCTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAA                             <  SRR4302540.8735302/94‑1 (MQ=60)
                                                                   CTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAAT                            >  SRR4302540.8242766/1‑94 (MQ=60)
                                                                   CTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAAT                            <  SRR4302540.6718639/94‑1 (MQ=60)
                                                                   CTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAAT                            <  SRR4302540.3372047/94‑1 (MQ=60)
                                                                   CTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAAT                            >  SRR4302540.4078544/1‑94 (MQ=60)
                                                                   CTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAAT                            <  SRR4302540.9692452/94‑1 (MQ=60)
                                                                   CTGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAAT                            >  SRR4302540.4738053/1‑94 (MQ=60)
                                                                    ctTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATG                           <  SRR4302540.2032099/92‑1 (MQ=60)
                                                                    TGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATG                           <  SRR4302540.301496/94‑1 (MQ=60)
                                                                    TGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATG                           <  SRR4302540.1893549/94‑1 (MQ=60)
                                                                    TGTCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATG                           <  SRR4302540.5101226/94‑1 (MQ=60)
                                                                      TCTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGC                         <  SRR4302540.363985/94‑1 (MQ=60)
                                                                       CTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCA                        >  SRR4302540.3566982/1‑94 (MQ=60)
                                                                       CTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCA                        >  SRR4302540.321715/1‑94 (MQ=60)
                                                                       CTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCA                        <  SRR4302540.1598833/94‑1 (MQ=60)
                                                                       CTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCA                        <  SRR4302540.827562/94‑1 (MQ=60)
                                                                       CTCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCA                        >  SRR4302540.5639187/1‑94 (MQ=60)
                                                                        TCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATTCAATGGCAT                       >  SRR4302540.6898815/1‑94 (MQ=60)
                                                                        TCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCAT                       >  SRR4302540.6898816/1‑94 (MQ=60)
                                                                        TCTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCAT                       <  SRR4302540.1938536/94‑1 (MQ=60)
                                                                        TCTTCAGGATGAATCCCATGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCAT                       <  SRR4302540.7694430/94‑1 (MQ=60)
                                                                         CTTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATG                      <  SRR4302540.4336344/94‑1 (MQ=60)
                                                                          TTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGAGGCTATTATCATTTATCCAATGGCATGG                     >  SRR4302540.5456340/1‑94 (MQ=60)
                                                                          TTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGG                     >  SRR4302540.5456339/1‑94 (MQ=60)
                                                                          TTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGG                     <  SRR4302540.2888729/94‑1 (MQ=60)
                                                                          TTCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGG                     <  SRR4302540.2826439/94‑1 (MQ=60)
                                                                           TCAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGA                    <  SRR4302540.3709448/94‑1 (MQ=60)
                                                                            CAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAA                   <  SRR4302540.3704154/94‑1 (MQ=60)
                                                                            CAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAA                   <  SRR4302540.6919918/94‑1 (MQ=60)
                                                                            CAGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAA                   <  SRR4302540.9308300/94‑1 (MQ=60)
                                                                             AGGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAAT                  >  SRR4302540.3142308/1‑94 (MQ=60)
                                                                              GGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATC                 <  SRR4302540.4079543/94‑1 (MQ=60)
                                                                              GGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATC                 <  SRR4302540.4558729/94‑1 (MQ=60)
                                                                              GGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATC                 <  SRR4302540.2281766/94‑1 (MQ=60)
                                                                              GGATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATC                 >  SRR4302540.2924950/1‑94 (MQ=60)
                                                                              AGATGAATCCCCTGGCCTGGGGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCCACTATCATTTATCCAATGGCATGGAATC                 <  SRR4302540.8500375/94‑1 (MQ=60)
                                                                               GATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCG                <  SRR4302540.5934967/94‑1 (MQ=60)
                                                                               GATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCG                <  SRR4302540.3675900/94‑1 (MQ=60)
                                                                                ATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGA               <  SRR4302540.9636316/94‑1 (MQ=60)
                                                                                ATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGA               >  SRR4302540.7501327/1‑94 (MQ=60)
                                                                                ATGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGA               >  SRR4302540.7551067/1‑94 (MQ=60)
                                                                                 TGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAA              <  SRR4302540.3713189/94‑1 (MQ=60)
                                                                                 TGAATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAA              >  SRR4302540.1614030/1‑94 (MQ=60)
                                                                                   AATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAAT            <  SRR4302540.5417536/94‑1 (MQ=60)
                                                                                    ATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATC           <  SRR4302540.9657248/94‑1 (MQ=60)
                                                                                    ATCCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATA           >  SRR4302540.1394689/1‑94 (MQ=60)
                                                                                      CCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGGAATCAG         <  SRR4302540.5795660/94‑1 (MQ=60)
                                                                                      CCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAG         <  SRR4302540.8095651/94‑1 (MQ=60)
                                                                                      CCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAG         <  SRR4302540.6097966/94‑1 (MQ=60)
                                                                                      CCCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAG         <  SRR4302540.6097967/94‑1 (MQ=60)
                                                                                       CCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGT        >  SRR4302540.786746/1‑94 (MQ=60)
                                                                                       CCCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGT        <  SRR4302540.196442/94‑1 (MQ=60)
                                                                                        CCTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTC       <  SRR4302540.3470789/94‑1 (MQ=60)
                                                                                         CTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCG      >  SRR4302540.3297266/1‑94 (MQ=60)
                                                                                         CTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCG      >  SRR4302540.2603028/1‑94 (MQ=60)
                                                                                         CTGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCG      <  SRR4302540.5893488/94‑1 (MQ=60)
                                                                                          TGGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCGA     >  SRR4302540.5108261/1‑94 (MQ=60)
                                                                                           GGCCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCGAT    <  SRR4302540.2588604/94‑1 (MQ=60)
                                                                                             CCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCGATAC  <  SRR4302540.6758271/94‑1 (MQ=60)
                                                                                             |                                                                                             
TTCTTATGCGGGATATCATCATTTCATCATGATGTCTTTGGTGAGCGGTGAACACAATACACCTGCGCTGTCTCTTCAGGATGAATCCCCTGGTCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCTTAGGTCACTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATCAGTCGATAC  >  NC_000913/1222641‑1222827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑