Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,369,184	T→C	C315C (TGT→TGC)	ycjM →	putative polysaccharide hydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,369,184	0	T	C	98.3%	903.1 / 2.7	288	C315C (TGT→TGC)	ycjM	putative polysaccharide hydrolase
Reads supporting (aligned to +/- strand): ref base T (4/1); new base C (146/137); total (150/138)
Fisher's exact test for biased strand distribution p-value = 3.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-02

Only 100 of 310 total aligned reads displayed.

AGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGC  >  NC_000913/1369094‑1369272

aGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTgcgc                                                                                        >  1:5576688/1‑93 (MQ=255)

aGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTgcgc                                                                                        >  1:5265336/1‑93 (MQ=255)

aGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTgcgc                                                                                        >  2:9159259/1‑93 (MQ=255)

aGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTgcgc                                                                                        >  1:21909/1‑93 (MQ=255)

 ggCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGcgcg                                                                                       <  2:8080304/93‑1 (MQ=255)

 ggCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGcgcg                                                                                       <  1:10011251/93‑1 (MQ=255)

    gATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTgg                                                                                    >  2:4609230/1‑93 (MQ=255)

    gATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTgg                                                                                    >  2:5285918/1‑93 (MQ=255)

    gATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTgg                                                                                    >  1:3824232/1‑93 (MQ=255)

     aTGACGAAGCACATCTGGTGGACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTggg                                                                                   <  1:5123211/93‑1 (MQ=255)

     aTGACGAAGCACATATGGTGTACCAGTTCTCGCTTCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTggg                                                                                   >  2:7090816/1‑93 (MQ=255)

     aTGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTggg                                                                                   <  1:6784360/93‑1 (MQ=255)

       gACGAAGCACATATGGTGTACCCGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGAGCTTTGACCGTGGgca                                                                                 >  1:9860279/1‑92 (MQ=255)

        aCGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGgcgc                                                                                >  1:7442404/1‑93 (MQ=255)

        aCGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGgcgc                                                                                >  1:5749921/1‑93 (MQ=255)

         cGAAACACATATGGTGTACCAGTTCTCGCTCCCGCCACTGGTGCTGAATGCGGTGCAAAAACAGAACGTTGAGTCGCTTTGCGAGTGGGCGCa                                                                               <  2:5426232/93‑1 (MQ=255)

           aaGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAACAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCaaa                                                                             >  1:8289641/1‑93 (MQ=255)

            aGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCaaaa                                                                            <  1:9585327/93‑1 (MQ=255)

               acaTATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCt                                                                         <  2:1288401/93‑1 (MQ=255)

                caTATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTg                                                                        <  1:425557/93‑1 (MQ=255)

                caTATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTg                                                                        <  1:9176044/93‑1 (MQ=255)

                 atatGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGa                                                                       <  1:6592472/93‑1 (MQ=255)

                  tatGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAATAACAGAACGTTGAGGCGCTTTGCGCGAGGGCGCAAAACCTGac                                                                      >  2:4944071/1‑93 (MQ=255)

                  tatGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGac                                                                      >  2:2595734/1‑93 (MQ=255)

                  tatGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGac                                                                      >  1:2568906/1‑93 (MQ=255)

                  tatGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGac                                                                      >  1:6312467/1‑93 (MQ=255)

                    tGGTGTACCAGTTTTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACTTGacac                                                                    >  2:8976517/1‑93 (MQ=255)

                     ggTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACt                                                                   <  2:6959935/93‑1 (MQ=255)

                        gtACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTAcc                                                                >  2:8011390/1‑93 (MQ=255)

                        gtACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTAcc                                                                <  2:6398185/93‑1 (MQ=255)

                        gtACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGCGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACAGTAca                                                                >  1:4740153/1‑92 (MQ=255)

                         tACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCt                                                               <  1:2054199/93‑1 (MQ=255)

                           ccAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTc                                                             <  2:4299893/93‑1 (MQ=255)

                            cAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTcc                                                            >  1:5996136/1‑93 (MQ=255)

                            cAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTcc                                                            <  2:8609451/93‑1 (MQ=255)

                              gTTCTCGCTGACGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAg                                                          >  2:6547536/1‑93 (MQ=255)

                               ttCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGc                                                         >  2:7917972/1‑93 (MQ=255)

                               ttCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGc                                                         >  1:9632722/1‑93 (MQ=255)

                               ttCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGc                                                         >  2:8421651/1‑93 (MQ=255)

                               ttCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGc                                                         >  2:5565165/1‑93 (MQ=255)

                                 ctcGCTGCCGCCGCTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCaa                                                       <  2:3571682/93‑1 (MQ=255)

                                  tcGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCCac                                                      >  1:713056/1‑93 (MQ=255)

                                  tcGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAac                                                      >  1:4161904/1‑93 (MQ=255)

                                   cGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAaca                                                     <  1:618630/93‑1 (MQ=255)

                                   cGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAaca                                                     <  2:7808809/93‑1 (MQ=255)

                                     cTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAAcacc                                                   >  1:1707945/1‑93 (MQ=255)

                                     cTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAAcacc                                                   >  2:5243967/1‑93 (MQ=255)

                                       gccgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAAcaccac                                                 >  2:7452227/1‑93 (MQ=255)

                                        ccgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACaccacc                                                <  1:7907875/93‑1 (MQ=255)

                                        ccgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACaccacc                                                <  2:3486544/93‑1 (MQ=255)

                                        ccgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACaccacc                                                >  2:248632/1‑93 (MQ=255)

                                            cACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGt                                            >  2:3834960/1‑93 (MQ=255)

                                             aCTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGtt                                           >  1:8804236/1‑93 (MQ=255)

                                                ggTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTaa                                        >  1:8970776/1‑93 (MQ=255)

                                                ggTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTaa                                        <  1:6879766/93‑1 (MQ=255)

                                                     tgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTcc                                   <  1:9217504/93‑1 (MQ=255)

                                                     tgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTcc                                   <  1:9434694/93‑1 (MQ=255)

                                                     tgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTcc                                   >  2:3027666/1‑93 (MQ=255)

                                                      gcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCt                                  >  2:9652475/1‑93 (MQ=255)

                                                      gcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCt                                  <  2:6000407/93‑1 (MQ=255)

                                                      gcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCt                                  <  1:1209931/93‑1 (MQ=255)

                                                      gcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCt                                  >  1:779105/1‑93 (MQ=255)

                                                       gaTGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTc                                 <  1:8194710/92‑1 (MQ=255)

                                                       cATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTc                                 >  1:5669680/1‑93 (MQ=255)

                                                       cATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTc                                 >  2:1628524/1‑93 (MQ=255)

                                                         tGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGc                               <  2:4780669/93‑1 (MQ=255)

                                                          gCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGcc                              >  1:281514/1‑93 (MQ=255)

                                                          gCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGcc                              <  2:3378006/93‑1 (MQ=255)

                                                          gCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGcc                              >  2:4918233/1‑93 (MQ=255)

                                                           cGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCct                             <  2:6177042/93‑1 (MQ=255)

                                                            ggTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCctc                            <  2:3316791/93‑1 (MQ=255)

                                                            ggTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCctc                            <  1:7300567/93‑1 (MQ=255)

                                                             gTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCctct                           <  2:1869000/93‑1 (MQ=255)

                                                               gCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCa                         <  2:7206626/93‑1 (MQ=255)

                                                                  aaaaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGa                      >  1:6455311/1‑93 (MQ=255)

                                                                   aaaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGAt                     >  1:7695873/1‑93 (MQ=255)

                                                                   aaaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGAt                     >  1:6154269/1‑93 (MQ=255)

                                                                   aaaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGAt                     <  2:2208063/93‑1 (MQ=255)

                                                                    aaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATg                    <  2:8297030/93‑1 (MQ=255)

                                                                    aaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATg                    >  1:4653351/1‑93 (MQ=255)

                                                                    aaCAGAACGTGGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATg                    <  2:4039281/93‑1 (MQ=255)

                                                                     aCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATgg                   <  1:4447907/93‑1 (MQ=255)

                                                                     aCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATgg                   >  1:5435562/1‑93 (MQ=255)

                                                                        gAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCAt                <  1:1326143/93‑1 (MQ=255)

                                                                         aaCGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATc               <  2:8820695/93‑1 (MQ=255)

                                                                         aaCGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATc               <  2:1541993/93‑1 (MQ=255)

                                                                         aaCGTTGAGGCGCTTTGCGCGGGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATc               <  1:8743848/93‑1 (MQ=255)

                                                                           cGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCgg             <  1:8474823/93‑1 (MQ=255)

                                                                            gTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCggg            >  1:3630601/1‑93 (MQ=255)

                                                                             ttGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGc           <  1:904481/93‑1 (MQ=255)

                                                                                ggtcgcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTaa        <  1:3943357/90‑1 (MQ=255)

                                                                                aGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTaa        <  2:9047691/93‑1 (MQ=255)

                                                                                 ggggcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTaaa       <  2:2448654/90‑1 (MQ=255)

                                                                                   cgcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAcc     >  1:2891671/1‑93 (MQ=255)

                                                                                   cgcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAcc     <  1:2387425/93‑1 (MQ=255)

                                                                                   cgcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAcc     <  2:9829354/93‑1 (MQ=255)

                                                                                    gcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAccc    <  1:798321/93‑1 (MQ=255)

                                                                                    ccTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAccc    <  2:9261026/92‑1 (MQ=255)

                                                                                     cTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCg   >  1:3529215/1‑93 (MQ=255)

                                                                                      tttGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGc  <  2:440836/93‑1 (MQ=255)

AGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGC  >  NC_000913/1369094‑1369272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCTACG  >  NC_000913/1369091‑1369276

CGCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGC                                                                                              <  SRR4302540.756921/94‑1 (MQ=60)

CGCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGC                                                                                              <  SRR4302540.9973973/94‑1 (MQ=60)

 GCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCG                                                                                             <  SRR4302540.3538310/94‑1 (MQ=60)

 GCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCG                                                                                             <  SRR4302540.7151214/94‑1 (MQ=60)

 GCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCG                                                                                             <  SRR4302540.1430095/94‑1 (MQ=60)

 GCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCG                                                                                             >  SRR4302540.7054901/1‑94 (MQ=60)

 GCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGCTGAGGCGCTTTGCG                                                                                             >  SRR4302540.493157/1‑94 (MQ=60)

  CAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGC                                                                                            >  SRR4302540.5638084/1‑94 (MQ=60)

  CAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGC                                                                                            >  SRR4302540.22152/1‑94 (MQ=60)

  CAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGC                                                                                            >  SRR4302540.5322797/1‑94 (MQ=60)

   AGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCG                                                                                           >  SRR4302540.4275501/1‑94 (MQ=60)

    GGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGT                                                                                          <  SRR4302540.10127822/94‑1 (MQ=60)

      CGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGG                                                                                        >  SRR4302540.3865849/1‑94 (MQ=60)

       GATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGG                                                                                       >  SRR4302540.3706263/1‑94 (MQ=60)

       GATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGG                                                                                       >  SRR4302540.9674223/1‑94 (MQ=60)

        ATGACGAAGCACATCTGGTGGACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGC                                                                                      <  SRR4302540.5178687/94‑1 (MQ=60)

        ATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGC                                                                                      <  SRR4302540.6859380/94‑1 (MQ=60)

        ATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGC                                                                                      <  SRR4302540.2655745/94‑1 (MQ=60)

         TGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCG                                                                                     <  SRR4302540.7071636/94‑1 (MQ=60)

         TGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCG                                                                                     <  SRR4302540.3666820/94‑1 (MQ=60)

          GACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGC                                                                                    >  SRR4302540.7525322/1‑94 (MQ=60)

          GACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGC                                                                                    >  SRR4302540.5813380/1‑94 (MQ=60)

            CGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAA                                                                                  >  SRR4302540.8352184/1‑94 (MQ=60)

             GAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAACAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAA                                                                                 >  SRR4302540.8385909/1‑94 (MQ=60)

             GAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAA                                                                                 <  SRR4302540.9103393/94‑1 (MQ=60)

             GAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAA                                                                                 >  SRR4302540.8899150/1‑94 (MQ=60)

             GAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAA                                                                                 <  SRR4302540.237181/94‑1 (MQ=60)

             GAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAA                                                                                 <  SRR4302540.6123773/94‑1 (MQ=60)

              AAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAA                                                                                >  SRR4302540.4103611/1‑94 (MQ=60)

               AGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAAC                                                                               >  SRR4302540.8011877/1‑94 (MQ=60)

               AGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAAC                                                                               <  SRR4302540.9698487/94‑1 (MQ=60)

                GCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACC                                                                              <  SRR4302540.6892960/94‑1 (MQ=60)

                GCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACC                                                                              >  SRR4302540.8954967/1‑94 (MQ=60)

                 CACATATGGTGTCCCCGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCT                                                                             <  SRR4302540.6008394/94‑1 (MQ=60)

                 CACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCT                                                                             <  SRR4302540.2875460/94‑1 (MQ=60)

                  ACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTG                                                                            >  SRR4302540.7992774/1‑94 (MQ=60)

                   CATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGA                                                                           <  SRR4302540.9286107/94‑1 (MQ=60)

                   CATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGA                                                                           <  SRR4302540.430034/94‑1 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGCGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          >  SRR4302540.6382764/1‑94 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          >  SRR4302540.8432171/1‑94 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          >  SRR4302540.5091330/1‑94 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          >  SRR4302540.6382765/1‑94 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          <  SRR4302540.6665481/94‑1 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          >  SRR4302540.2596604/1‑94 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          >  SRR4302540.5473186/1‑94 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          <  SRR4302540.4734761/94‑1 (MQ=60)

                    ATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGAC                                                                          <  SRR4302540.234886/94‑1 (MQ=60)

                     TATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACA                                                                         <  SRR4302540.3022986/94‑1 (MQ=60)

                      ATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACAC                                                                        <  SRR4302540.1511384/94‑1 (MQ=60)

                      ATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACAC                                                                        <  SRR4302540.6844840/94‑1 (MQ=60)

                      ATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACAC                                                                        <  SRR4302540.7200592/94‑1 (MQ=60)

                      ATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACAC                                                                        >  SRR4302540.2723781/1‑94 (MQ=60)

                      ATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACAC                                                                        <  SRR4302540.6278479/94‑1 (MQ=60)

                       TGGTGTACCAGTTCTCGCTGCCGCCACTGGTCCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACT                                                                       <  SRR4302540.1012553/94‑1 (MQ=60)

                          TGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACC                                                                    <  SRR4302540.10099473/94‑1 (MQ=60)

                          TGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACC                                                                    <  SRR4302540.9842449/94‑1 (MQ=60)

                          TGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGCGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACAgtaca                                                                    >  SRR4302540.4790739/1‑89 (MQ=60)

                           GTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCT                                                                   >  SRR4302540.1997781/1‑94 (MQ=60)

                           GTACCAGTTCTCGCTGCCGCCACTGGTACTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCT                                                                   >  SRR4302540.3038116/1‑94 (MQ=60)

                            TACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTT                                                                  <  SRR4302540.2076312/94‑1 (MQ=60)

                            TACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTT                                                                  <  SRR4302540.9678542/94‑1 (MQ=60)

                             ACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTC                                                                 >  SRR4302540.760080/1‑94 (MQ=60)

                              CCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCC                                                                >  SRR4302540.6062580/1‑94 (MQ=60)

                               CAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCA                                                               <  SRR4302540.9306899/94‑1 (MQ=60)

                               CAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCA                                                               >  SRR4302540.10107363/1‑94 (MQ=60)

                               CAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCA                                                               <  SRR4302540.332495/94‑1 (MQ=60)

                               CAGTTCTCGCTGCCGCAACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCA                                                               <  SRR4302540.9029493/94‑1 (MQ=60)

                                AGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAG                                                              >  SRR4302540.4057626/1‑94 (MQ=60)

                                AGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAG                                                              <  SRR4302540.6432951/94‑1 (MQ=60)

                                 GTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGC                                                             >  SRR4302540.8557871/1‑94 (MQ=60)

                                 GTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGC                                                             >  SRR4302540.212447/1‑94 (MQ=60)

                                 GTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGC                                                             >  SRR4302540.9746223/1‑94 (MQ=60)

                                 GTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGC                                                             >  SRR4302540.9746222/1‑94 (MQ=60)

                                  TTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCA                                                            >  SRR4302540.8717471/1‑94 (MQ=60)

                                    CTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCCAC                                                          >  SRR4302540.720714/1‑94 (MQ=60)

                                    CTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAAC                                                          >  SRR4302540.4207016/1‑94 (MQ=60)

                                      CGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACAC                                                        <  SRR4302540.625221/94‑1 (MQ=60)

                                       GCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACC                                                       >  SRR4302540.7253191/1‑94 (MQ=60)

                                       GCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACC                                                       <  SRR4302540.77002/94‑1 (MQ=60)

                                       GCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACC                                                       >  SRR4302540.1726402/1‑94 (MQ=60)

                                       GCGGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACC                                                       <  SRR4302540.9475999/94‑1 (MQ=60)

                                        CTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACTA                                                      >  SRR4302540.7835741/1‑94 (MQ=60)

                                         TGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCAC                                                     >  SRR4302540.7319568/1‑94 (MQ=60)

                                         TGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCAC                                                     >  SRR4302540.9513345/1‑94 (MQ=60)

                                          GCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACC                                                    <  SRR4302540.6931238/94‑1 (MQ=60)

                                           CCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCT                                                   <  SRR4302540.8000088/94‑1 (MQ=60)

                                             GCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGG                                                 <  SRR4302540.1048335/94‑1 (MQ=60)

                                             GCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGG                                                 <  SRR4302540.9723712/94‑1 (MQ=60)

                                             GCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGG                                                 <  SRR4302540.6846712/94‑1 (MQ=60)

                                             GCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGG                                                 <  SRR4302540.124438/94‑1 (MQ=60)

                                             CCCACTGGTGCTGCAGGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGG                                                 <  SRR4302540.124439/94‑1 (MQ=60)

                                              CCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGT                                                >  SRR4302540.7897944/1‑94 (MQ=60)

                                              CCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGT                                                >  SRR4302540.4820838/1‑94 (MQ=60)

                                              CCACTGGTGCTGCATGCGGTGCAAAAACAGAACATTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGTAACACCACCTGGT                                                >  SRR4302540.3922211/1‑94 (MQ=60)

                                               CACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTT                                               >  SRR4302540.8906012/1‑94 (MQ=60)

                                               CACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTT                                               >  SRR4302540.8906011/1‑94 (MQ=60)

                                               CACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTT                                               <  SRR4302540.5806425/94‑1 (MQ=60)

                                                  TGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAA                                            >  SRR4302540.9077276/1‑94 (MQ=60)

                                                   GGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAAC                                           >  SRR4302540.5405411/1‑94 (MQ=60)

                                                   GGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAAC                                           <  SRR4302540.4458162/94‑1 (MQ=60)

                                                   GGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAAC                                           <  SRR4302540.6956025/94‑1 (MQ=60)

                                                    GTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACT                                          <  SRR4302540.5704474/94‑1 (MQ=60)

                                                       CTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCC                                       <  SRR4302540.4778101/94‑1 (MQ=60)

                                                       CTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCC                                       <  SRR4302540.5893836/94‑1 (MQ=60)

                                                        TGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCT                                      >  SRR4302540.787408/1‑94 (MQ=60)

                                                        TGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCT                                      <  SRR4302540.9328073/94‑1 (MQ=60)

                                                        TGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCT                                      <  SRR4302540.9546749/94‑1 (MQ=60)

                                                         GCGTGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTC                                     <  SRR4302540.5253897/94‑1 (MQ=60)

                                                         GCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTC                                     >  SRR4302540.5732111/1‑94 (MQ=60)

                                                         GCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTC                                     <  SRR4302540.1899805/94‑1 (MQ=60)

                                                         GCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTC                                     >  SRR4302540.2907601/1‑94 (MQ=60)

                                                         GCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTC                                     >  SRR4302540.9313047/1‑94 (MQ=60)

                                                         GCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTC                                     <  SRR4302540.5253901/94‑1 (MQ=60)

                                                         GCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTC                                     <  SRR4302540.1222338/94‑1 (MQ=60)

                                                          GATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCG                                    <  SRR4302540.8289938/94‑1 (MQ=60)

                                                          CATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGTGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCG                                    >  SRR4302540.6228408/1‑94 (MQ=60)

                                                          CATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCG                                    >  SRR4302540.6228409/1‑94 (MQ=60)

                                                            TGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCC                                  >  SRR4302540.284278/1‑94 (MQ=60)

                                                               GGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCT                               >  SRR4302540.7493608/1‑94 (MQ=60)

                                                               GGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCT                               >  SRR4302540.6183631/1‑94 (MQ=60)

                                                               GGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCT                               <  SRR4302540.7382056/94‑1 (MQ=60)

                                                                GTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTTGGGCCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTC                              <  SRR4302540.6563285/94‑1 (MQ=60)

                                                                GTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTC                              >  SRR4302540.5676332/1‑94 (MQ=60)

                                                                GTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTC                              <  SRR4302540.1560214/94‑1 (MQ=60)

                                                                GTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTC                              >  SRR4302540.8163024/1‑94 (MQ=60)

                                                                 TGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCA                             >  SRR4302540.4345740/1‑94 (MQ=60)

                                                                  GCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCAC                            <  SRR4302540.4216162/94‑1 (MQ=60)

                                                                  GCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCAC                            <  SRR4302540.6539585/94‑1 (MQ=60)

                                                                  GCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCAC                            <  SRR4302540.5524474/94‑1 (MQ=60)

                                                                   CAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACG                           >  SRR4302540.3918909/1‑94 (MQ=60)

                                                                   CAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACG                           <  SRR4302540.4556668/94‑1 (MQ=60)

                                                                   CAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACG                           <  SRR4302540.8007643/94‑1 (MQ=60)

                                                                    AAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGA                          >  SRR4302540.6527162/1‑94 (MQ=60)

                                                                    AAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGATTTAACTTCCTCGCCTCTCACGA                          >  SRR4302540.6527161/1‑94 (MQ=60)

                                                                     AAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGAT                         >  SRR4302540.6222827/1‑94 (MQ=60)

                                                                     AAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGAT                         <  SRR4302540.3631706/94‑1 (MQ=60)

                                                                     AAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGAT                         >  SRR4302540.7783574/1‑94 (MQ=60)

                                                                      AAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATG                        >  SRR4302540.4703144/1‑94 (MQ=60)

                                                                       AACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGG                       <  SRR4302540.3788965/94‑1 (MQ=60)

                                                                       AACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGG                       >  SRR4302540.5495345/1‑94 (MQ=60)

                                                                        ACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGC                      <  SRR4302540.8326558/94‑1 (MQ=60)

                                                                        ACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGC                      <  SRR4302540.4496113/94‑1 (MQ=60)

                                                                          AGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCAT                    >  SRR4302540.2427386/1‑94 (MQ=60)

                                                                          AGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCAT                    >  SRR4302540.8079122/1‑94 (MQ=60)

                                                                           GAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATC                   <  SRR4302540.2561196/94‑1 (MQ=60)

                                                                           GAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATC                   <  SRR4302540.1339978/94‑1 (MQ=60)

                                                                            AACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCG                  <  SRR4302540.9808294/94‑1 (MQ=60)

                                                                            AACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCG                  >  SRR4302540.8734003/1‑94 (MQ=60)

                                                                            AACGTTGAGGCGCTTTGCGCGGGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCG                  <  SRR4302540.8845333/94‑1 (MQ=60)

                                                                              CGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGG                <  SRR4302540.9086123/94‑1 (MQ=60)

                                                                              CGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGG                <  SRR4302540.8573246/94‑1 (MQ=60)

                                                                              CGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGG                >  SRR4302540.8213623/1‑94 (MQ=60)

                                                                              CGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGG                >  SRR4302540.3670340/1‑94 (MQ=60)

                                                                               GTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGC               >  SRR4302540.6574434/1‑94 (MQ=60)

                                                                               GTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGC               >  SRR4302540.5579696/1‑94 (MQ=60)

                                                                                TTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCT              <  SRR4302540.914082/94‑1 (MQ=60)

                                                                                GTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCT              <  SRR4302540.914083/94‑1 (MQ=60)

                                                                                 TGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTA             <  SRR4302540.9686780/94‑1 (MQ=60)

                                                                                   ggtCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAA           <  SRR4302540.3985950/91‑1 (MQ=60)

                                                                                     GCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACC         >  SRR4302540.2923187/1‑94 (MQ=60)

                                                                                     GCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACC         >  SRR4302540.5734403/1‑94 (MQ=60)

                                                                                      CGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCC        <  SRR4302540.2413155/94‑1 (MQ=60)

                                                                                      CGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCC        <  SRR4302540.4510242/94‑1 (MQ=60)

                                                                                       GCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCG       <  SRR4302540.806800/94‑1 (MQ=60)

                                                                                       GCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCG       >  SRR4302540.3567720/1‑94 (MQ=60)

                                                                                       GCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCG       >  SRR4302540.2127709/1‑94 (MQ=60)

                                                                                       GCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCG       >  SRR4302540.9265401/1‑94 (MQ=60)

                                                                                       GCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCC       >  SRR4302540.7868298/1‑94 (MQ=60)

                                                                                        CTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGC      >  SRR4302540.7521829/1‑94 (MQ=60)

                                                                                         TTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCT     <  SRR4302540.5303707/94‑1 (MQ=60)

                                                                                            GCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCTACG  <  SRR4302540.3100053/94‑1 (MQ=60)

CGCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCTACG  >  NC_000913/1369091‑1369276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 5 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`