Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,448,839	G→A	P179S (CCG→TCG)	tynA ←	copper amine oxidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,448,839	0	G	A	91.2%	961.9 / 42.7	321	P179S (CCG→TCG)	tynA	copper amine oxidase
Reads supporting (aligned to +/- strand): ref base G (20/8); new base A (137/155); total (158/163)
Fisher's exact test for biased strand distribution p-value = 1.68e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.93e-01

Only 100 of 328 total aligned reads displayed.

GTTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGGT  >  NC_000913/1448749‑1448930

 ttGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTg                                                                                          <  1:8742287/93‑1 (MQ=255)

  tGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTgg                                                                                         <  1:2440531/93‑1 (MQ=255)

   gCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGt                                                                                        <  2:4387387/93‑1 (MQ=255)

    ccAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTc                                                                                       <  2:9691767/93‑1 (MQ=255)

      aGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCaa                                                                                     <  1:866701/93‑1 (MQ=255)

      aGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCaa                                                                                     <  2:5721805/93‑1 (MQ=255)

      aGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCaa                                                                                     <  1:2035703/93‑1 (MQ=255)

       ggAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAAc                                                                                    <  2:62928/93‑1 (MQ=255)

        gagaGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAAcc                                                                                   <  1:5533600/93‑1 (MQ=255)

         agagCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCg                                                                                  >  2:157957/1‑93 (MQ=255)

          gagCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCgg                                                                                 >  2:9337300/1‑93 (MQ=255)

          gagCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCgg                                                                                 >  2:4945863/1‑93 (MQ=255)

          gagCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCgg                                                                                 >  1:3189939/1‑93 (MQ=255)

           agCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgt                                                                                <  1:1732417/93‑1 (MQ=255)

            gCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtt                                                                               >  2:1619680/1‑93 (MQ=255)

            gCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtt                                                                               >  2:588535/1‑93 (MQ=255)

            gCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtt                                                                               >  1:1232828/1‑93 (MQ=255)

            gCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtt                                                                               >  1:6904972/1‑93 (MQ=255)

            gCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtt                                                                               <  1:4684281/93‑1 (MQ=255)

               gTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtttgt                                                                            <  1:7760022/93‑1 (MQ=255)

               gTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtttgt                                                                            >  1:10010094/1‑93 (MQ=255)

                tttGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGGCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtttgtt                                                                           >  1:7504576/1‑93 (MQ=255)

                 ttgttgTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGgtttgttt                                                                          >  2:825828/1‑93 (MQ=255)

                 ttgttgTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGgtttgttt                                                                          >  2:9295792/1‑93 (MQ=255)

                  tgttgtTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGtttt                                                                         >  2:2184075/1‑93 (MQ=255)

                  tgttgtTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGtttt                                                                         >  2:7880486/1‑93 (MQ=255)

                   gttgttTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTc                                                                        >  2:9185075/1‑93 (MQ=255)

                     tgttTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCa                                                                      >  2:3268535/1‑93 (MQ=255)

                     tgttTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCa                                                                      <  2:5195958/93‑1 (MQ=255)

                     tgttTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCa                                                                      <  1:790868/93‑1 (MQ=255)

                         ttGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAgcgc                                                                  <  1:7104105/93‑1 (MQ=255)

                           gCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCaa                                                                >  1:9240293/1‑93 (MQ=255)

                            cAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCaaa                                                               <  2:4143747/93‑1 (MQ=255)

                            cAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCaaa                                                               <  1:48663/93‑1 (MQ=255)

                                tCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGcc                                                           >  1:1890091/1‑93 (MQ=255)

                                 ccaccaCCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGccc                                                          <  2:8599441/93‑1 (MQ=255)

                                 ccaccaCCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGccc                                                          <  2:8039037/93‑1 (MQ=255)

                                  caccacCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCa                                                         <  2:1682135/93‑1 (MQ=255)

                                   cccaccGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAg                                                        <  1:5508009/92‑1 (MQ=255)

                                     caccGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGAc                                                      <  2:6723667/93‑1 (MQ=255)

                                      cccGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACa                                                     <  1:9006966/92‑1 (MQ=255)

                                      accGCTTCGATTATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACa                                                     >  2:4479016/1‑93 (MQ=255)

                                        cGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGc                                                   >  1:957011/1‑93 (MQ=255)

                                         gCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGct                                                  >  2:3870403/1‑93 (MQ=255)

                                          cTTCGATGATATGTTTGCCGCCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGCTTTCCAGCGCAAACGCCCGGACAGctt                                                 >  2:354378/1‑93 (MQ=255)

                                           ttCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGcttc                                                <  1:9773102/93‑1 (MQ=255)

                                            tCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGcttct                                               >  1:6879812/1‑93 (MQ=255)

                                               atgatATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTa                                            <  2:6549554/93‑1 (MQ=255)

                                               atgatATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTa                                            >  2:8730578/1‑93 (MQ=255)

                                                tgatATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTAt                                           <  2:9561202/93‑1 (MQ=255)

                                                tgatATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTAt                                           <  2:2651419/93‑1 (MQ=255)

                                                 tatatGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATc                                          <  2:7568250/92‑1 (MQ=255)

                                                  atatGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCt                                         >  2:1805345/1‑93 (MQ=255)

                                                  atatGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCt                                         >  1:8205558/1‑93 (MQ=255)

                                                   tatGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTg                                        >  2:4276177/1‑93 (MQ=255)

                                                   tatGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTg                                        >  2:9037712/1‑93 (MQ=255)

                                                   tatGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTg                                        <  1:9126211/93‑1 (MQ=255)

                                                   taggTTTGCCGGCGCACATAATGACGTCTGCTTTGCGCGACTGGTCAACCGCTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTg                                        <  1:7031736/90‑1 (MQ=255)

                                                    atGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTgg                                       >  1:8525068/1‑93 (MQ=255)

                                                     tGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGc                                      >  1:6673012/1‑93 (MQ=255)

                                                      gTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCg                                     <  1:4491985/93‑1 (MQ=255)

                                                          gCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAg                                 <  1:5858955/93‑1 (MQ=255)

                                                          gCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAg                                 <  1:3259782/93‑1 (MQ=255)

                                                            cGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCa                               <  1:8319660/93‑1 (MQ=255)

                                                            cGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCa                               >  1:6768728/1‑93 (MQ=255)

                                                             gTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAg                              >  2:2157250/1‑93 (MQ=255)

                                                             gTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAg                              <  1:2463624/93‑1 (MQ=255)

                                                             gTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAg                              <  1:644932/93‑1 (MQ=255)

                                                             gTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAg                              >  1:9418050/1‑93 (MQ=255)

                                                              tCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAgg                             <  2:3006759/93‑1 (MQ=255)

                                                              gcGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAgg                             <  1:5276288/92‑1 (MQ=255)

                                                               cGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAggg                            <  2:1528486/93‑1 (MQ=255)

                                                               cGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAggg                            <  2:6366893/93‑1 (MQ=255)

                                                                gAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGga                           <  2:2312155/93‑1 (MQ=255)

                                                                 aGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGgag                          >  1:2992906/1‑93 (MQ=255)

                                                                  gCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGgaga                         <  2:6873621/93‑1 (MQ=255)

                                                                   cATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGAt                        <  2:6460234/93‑1 (MQ=255)

                                                                    aTAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGAtc                       >  1:3449358/1‑93 (MQ=255)

                                                                     tAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGAtct                      >  2:6083122/1‑93 (MQ=255)

                                                                     tAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGAtct                      >  2:9757053/1‑93 (MQ=255)

                                                                     tAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGAtct                      >  1:9995697/1‑93 (MQ=255)

                                                                     tAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGAtct                      >  1:9877088/1‑93 (MQ=255)

                                                                      aaTGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCGCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGAtctc                     <  1:3849254/93‑1 (MQ=255)

                                                                       aTGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCa                    <  1:2425143/93‑1 (MQ=255)

                                                                        tGACGTCGGCTTTGCGCGAGTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAg                   >  2:1342218/1‑93 (MQ=255)

                                                                         gACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGt                  <  1:3754980/93‑1 (MQ=255)

                                                                         gACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGt                  <  2:735868/93‑1 (MQ=255)

                                                                         gACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGt                  >  2:1064217/1‑93 (MQ=255)

                                                                           cGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTaa                <  2:3150516/93‑1 (MQ=255)

                                                                            gTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTaaa               >  2:718503/1‑93 (MQ=255)

                                                                            gTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTaaa               >  2:3675100/1‑93 (MQ=255)

                                                                            gTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTaaa               >  2:8388777/1‑93 (MQ=255)

                                                                             tCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTaaaa              >  1:2253402/1‑93 (MQ=255)

                                                                               ggCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACg            <  1:1558014/93‑1 (MQ=255)

                                                                                gCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACgg           <  1:8925253/93‑1 (MQ=255)

                                                                                gCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACgg           >  2:1931499/1‑93 (MQ=255)

                                                                                   ttGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTa        <  2:4830011/93‑1 (MQ=255)

                                                                                      cgcgACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTg     <  1:4300928/93‑1 (MQ=255)

                                                                                       gcgACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTgg    <  1:6217080/93‑1 (MQ=255)

                                                                                       gcgACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTgg    <  1:2077705/93‑1 (MQ=255)

GTTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGGT  >  NC_000913/1448749‑1448930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGGTTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGGT  >  NC_000913/1448747‑1448930

GGGTTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGAC                                                                                            <  SRR4302540.6474986/94‑1 (MQ=60)

GGGTTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGAC                                                                                            <  SRR4302540.7426334/94‑1 (MQ=60)

 GGTTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACT                                                                                           >  SRR4302540.5591961/1‑94 (MQ=60)

   gtgctaggtGAGCAGTTTGTTGTTTTGCGGCTCCTCCACCGCTTCGATGATATGTTTGCCTTCGAGCATAATGACGTCGGCTTTGCGCGACTGG                                                                                         <  SRR4302540.5812901/85‑1 (MQ=60)

   TTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGG                                                                                         <  SRR4302540.4693199/94‑1 (MQ=60)

   TTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGG                                                                                         <  SRR4302540.8843762/94‑1 (MQ=60)

    TGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGT                                                                                        <  SRR4302540.9430657/94‑1 (MQ=60)

    TGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGT                                                                                        <  SRR4302540.2466810/94‑1 (MQ=60)

     GCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTC                                                                                       <  SRR4302540.9172767/94‑1 (MQ=60)

       CAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAA                                                                                     >  SRR4302540.870091/1‑94 (MQ=60)

       CAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAA                                                                                     >  SRR4302540.3355967/1‑94 (MQ=60)

        AGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAAC                                                                                    <  SRR4302540.875900/94‑1 (MQ=60)

        AGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAAC                                                                                    >  SRR4302540.797238/1‑94 (MQ=60)

        AGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAAC                                                                                    <  SRR4302540.2057655/94‑1 (MQ=60)

         GGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGATTTGCGCGACTGGTCAACC                                                                                   >  SRR4302540.8590402/1‑94 (MQ=60)

          GAGAGCAGTTTGTTGTTTTGCAGATCCACCCCCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCG                                                                                  <  SRR4302540.7690266/94‑1 (MQ=60)

          GAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCG                                                                                  <  SRR4302540.6662815/94‑1 (MQ=60)

          GAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCG                                                                                  <  SRR4302540.5594537/94‑1 (MQ=60)

           AGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGG                                                                                 >  SRR4302540.8960000/1‑94 (MQ=60)

           AGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGG                                                                                 >  SRR4302540.3224592/1‑94 (MQ=60)

           AGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGG                                                                                 >  SRR4302540.1150407/1‑94 (MQ=60)

           AGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTAGGCTTTGCGCGACTGGTCAACCGG                                                                                 >  SRR4302540.1150148/1‑94 (MQ=60)

            GAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGT                                                                                >  SRR4302540.438846/1‑94 (MQ=60)

             AGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTT                                                                               >  SRR4302540.6981743/1‑94 (MQ=60)

             AGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTT                                                                               >  SRR4302540.5138677/1‑94 (MQ=60)

             AGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTT                                                                               >  SRR4302540.1245417/1‑94 (MQ=60)

             AGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTT                                                                               <  SRR4302540.759607/94‑1 (MQ=60)

             AGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTT                                                                               >  SRR4302540.6971100/1‑94 (MQ=60)

             AGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTT                                                                               <  SRR4302540.1751115/94‑1 (MQ=60)

              GCAGTTTGTTGTTTTGCAGATCCACCCCCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTG                                                                              <  SRR4302540.1524555/94‑1 (MQ=60)

              GCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTT                                                                              >  SRR4302540.6416463/1‑94 (MQ=60)

              GCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTT                                                                              <  SRR4302540.4734387/94‑1 (MQ=60)

               CAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTG                                                                             <  SRR4302540.374547/94‑1 (MQ=60)

               CAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTG                                                                             >  SRR4302540.4873103/1‑94 (MQ=60)

               CAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTG                                                                             >  SRR4302540.4117180/1‑94 (MQ=60)

                AGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGTCTGGTCAACCGGTTTGT                                                                            >  SRR4302540.9092172/1‑94 (MQ=60)

                AGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGT                                                                            >  SRR4302540.9540159/1‑94 (MQ=60)

                AGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGT                                                                            >  SRR4302540.10126655/1‑94 (MQ=60)

                AGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGT                                                                            <  SRR4302540.9772554/94‑1 (MQ=60)

                 GTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGGCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTT                                                                           >  SRR4302540.7588448/1‑94 (MQ=60)

                 GTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTT                                                                           >  SRR4302540.2478611/1‑94 (MQ=60)

                 GTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTT                                                                           >  SRR4302540.2478610/1‑94 (MQ=60)

                 GTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTT                                                                           <  SRR4302540.7850702/94‑1 (MQ=60)

                 GTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTT                                                                           >  SRR4302540.9341019/1‑94 (MQ=60)

                   TTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTGAACCGGTTTGTTTC                                                                         >  SRR4302540.2362565/1‑94 (MQ=60)

                    TGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTC                                                                        >  SRR4302540.2606681/1‑94 (MQ=60)

                     GTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCC                                                                       >  SRR4302540.4772932/1‑94 (MQ=60)

                     GTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCC                                                                       <  SRR4302540.6890529/94‑1 (MQ=60)

                       TGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAG                                                                     <  SRR4302540.799271/94‑1 (MQ=60)

                        GTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGC                                                                    >  SRR4302540.9152343/1‑94 (MQ=60)

                        GTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGC                                                                    <  SRR4302540.7467309/94‑1 (MQ=60)

                        GTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGC                                                                    <  SRR4302540.3306001/94‑1 (MQ=60)

                        GTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGC                                                                    >  SRR4302540.1822168/1‑94 (MQ=60)

                           TTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCA                                                                 <  SRR4302540.7183145/94‑1 (MQ=60)

                            TGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAA                                                                >  SRR4302540.9350977/1‑94 (MQ=60)

                              CAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAAC                                                              <  SRR4302540.49153/94‑1 (MQ=60)

                              CAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTCCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAAC                                                              <  SRR4302540.1758005/94‑1 (MQ=60)

                              CAGATCCACCACCGCTTAGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAAC                                                              <  SRR4302540.9100472/94‑1 (MQ=60)

                                GATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGC                                                            >  SRR4302540.10006994/1‑94 (MQ=60)

                                 ATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCC                                                           >  SRR4302540.1910783/1‑94 (MQ=60)

                                  TCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCC                                                          <  SRR4302540.7117420/94‑1 (MQ=60)

                                   CCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCA                                                         <  SRR4302540.7288630/94‑1 (MQ=60)

                                    CACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAG                                                        >  SRR4302540.8904852/1‑94 (MQ=60)

                                    CACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAG                                                        >  SRR4302540.3702348/1‑94 (MQ=60)

                                    CACCACCGATTCGATGATATGTTTGCCGTCGAGGATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAG                                                        <  SRR4302540.7851826/94‑1 (MQ=60)

                                     CCCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGA                                                       <  SRR4302540.5568669/94‑1 (MQ=60)

                                       CACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGGTTGTTTTCCAGCGCGAACGCCCAGACA                                                     >  SRR4302540.8157788/1‑94 (MQ=60)

                                       CACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACA                                                     <  SRR4302540.5649700/94‑1 (MQ=60)

                                       CACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACA                                                     >  SRR4302540.5539308/1‑94 (MQ=60)

                                       CACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAAACGGTTTGCTTTCCAGCGCAAACGTCCAGACA                                                     >  SRR4302540.6936773/1‑94 (MQ=60)

                                        CCCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAG                                                    <  SRR4302540.9115020/94‑1 (MQ=60)

                                        ACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAG                                                    >  SRR4302540.1736146/1‑94 (MQ=60)

                                         CCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGC                                                   >  SRR4302540.966931/1‑94 (MQ=60)

                                         CCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGC                                                   >  SRR4302540.2183994/1‑94 (MQ=60)

                                         CCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGC                                                   >  SRR4302540.2465579/1‑94 (MQ=60)

                                           GCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTT                                                 <  SRR4302540.4263174/94‑1 (MQ=60)

                                            CTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTC                                                >  SRR4302540.1473154/1‑94 (MQ=60)

                                             TTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCT                                               <  SRR4302540.9887675/94‑1 (MQ=60)

                                             TTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCT                                               >  SRR4302540.6956071/1‑94 (MQ=60)

                                             TTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCT                                               <  SRR4302540.9887674/94‑1 (MQ=60)

                                              TCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCCTCTT                                              >  SRR4302540.9503688/1‑94 (MQ=60)

                                               CGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTT                                             <  SRR4302540.1001990/94‑1 (MQ=60)

                                               CGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTT                                             >  SRR4302540.8180135/1‑94 (MQ=60)

                                               CGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTT                                             <  SRR4302540.8843371/94‑1 (MQ=60)

                                                GATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTA                                            >  SRR4302540.6670403/1‑94 (MQ=60)

                                                  TGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATC                                          >  SRR4302540.2463831/1‑94 (MQ=60)

                                                  TGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATC                                          >  SRR4302540.2323177/1‑94 (MQ=60)

                                                   GATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACGGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCT                                         <  SRR4302540.3881196/94‑1 (MQ=60)

                                                   GATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCT                                         >  SRR4302540.8300915/1‑94 (MQ=60)

                                                   GATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCT                                         >  SRR4302540.5615500/1‑94 (MQ=60)

                                                    ATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTG                                        <  SRR4302540.8461416/94‑1 (MQ=60)

                                                     TATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGG                                       <  SRR4302540.7109878/94‑1 (MQ=60)

                                                     TATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGG                                       <  SRR4302540.9919503/94‑1 (MQ=60)

                                                     TATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGG                                       >  SRR4302540.8624128/1‑94 (MQ=60)

                                                     TATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGG                                       <  SRR4302540.9235912/94‑1 (MQ=60)

                                                     TAGGTTTGCCGGCGCACATAATGACGTCTGCTTTGCGCGACTGGTCAACCGCTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGG                                       <  SRR4302540.7109879/94‑1 (MQ=60)

                                                      ATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGC                                      <  SRR4302540.3736705/94‑1 (MQ=60)

                                                      ATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGC                                      >  SRR4302540.6746740/1‑94 (MQ=60)

                                                       TGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCG                                     >  SRR4302540.6415707/1‑94 (MQ=60)

                                                        GTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGG                                    <  SRR4302540.4540686/94‑1 (MQ=60)

                                                        GTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGG                                    <  SRR4302540.8777982/94‑1 (MQ=60)

                                                        GTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGG                                    >  SRR4302540.1963986/1‑94 (MQ=60)

                                                        GTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGG                                    >  SRR4302540.1621136/1‑94 (MQ=60)

                                                        GTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGG                                    >  SRR4302540.6263313/1‑94 (MQ=60)

                                                         TTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGT                                   <  SRR4302540.5346044/94‑1 (MQ=60)

                                                            GCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGC                                <  SRR4302540.5923749/94‑1 (MQ=60)

                                                            GCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGC                                >  SRR4302540.8704689/1‑94 (MQ=60)

                                                            GCCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGC                                <  SRR4302540.3295333/94‑1 (MQ=60)

                                                             CCGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCA                               >  SRR4302540.6843533/1‑94 (MQ=60)

                                                              CGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAG                              <  SRR4302540.8416236/94‑1 (MQ=60)

                                                              CGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAG                              <  SRR4302540.3062267/94‑1 (MQ=60)

                                                              CGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAG                              >  SRR4302540.2612286/1‑94 (MQ=60)

                                                              CGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAG                              >  SRR4302540.9529998/1‑94 (MQ=60)

                                                              CGTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAG                              <  SRR4302540.6199753/94‑1 (MQ=60)

                                                               GTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGG                             <  SRR4302540.5594344/94‑1 (MQ=60)

                                                               GTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGG                             <  SRR4302540.2490139/94‑1 (MQ=60)

                                                               GTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGG                             <  SRR4302540.4534905/94‑1 (MQ=60)

                                                               GTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGG                             <  SRR4302540.3194214/94‑1 (MQ=60)

                                                               GTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGG                             >  SRR4302540.2058864/1‑94 (MQ=60)

                                                               GTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGG                             <  SRR4302540.651803/94‑1 (MQ=60)

                                                               GTCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGG                             >  SRR4302540.2058863/1‑94 (MQ=60)

                                                                TCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGG                            >  SRR4302540.1947797/1‑94 (MQ=60)

                                                                TCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGG                            <  SRR4302540.8336996/94‑1 (MQ=60)

                                                                GCGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGG                            <  SRR4302540.5333897/94‑1 (MQ=60)

                                                                 CGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGA                           >  SRR4302540.7152795/1‑94 (MQ=60)

                                                                 CGAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGA                           <  SRR4302540.1794658/94‑1 (MQ=60)

                                                                  GAGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAG                          >  SRR4302540.3025901/1‑94 (MQ=60)

                                                                   AGCATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGA                         >  SRR4302540.8816080/1‑94 (MQ=60)

                                                                    GCATAATGACGTCGGCTTTGCGCGACTGGTCAGCCGGTTTGTTTTCCAGCGCAAACGCCCAGGCAGCTTCTTTATCTGGCGGTAGCAGGGAGAT                        <  SRR4302540.4495044/94‑1 (MQ=60)

                                                                     CATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATC                       >  SRR4302540.3486879/1‑94 (MQ=60)

                                                                      ATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCT                      >  SRR4302540.6784857/1‑94 (MQ=60)

                                                                      ATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCT                      >  SRR4302540.9992441/1‑94 (MQ=60)

                                                                      ATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCT                      >  SRR4302540.10112169/1‑94 (MQ=60)

                                                                      ATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCT                      >  SRR4302540.3834776/1‑94 (MQ=60)

                                                                      ATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCT                      >  SRR4302540.71837/1‑94 (MQ=60)

                                                                      ATAATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCT                      <  SRR4302540.6767079/94‑1 (MQ=60)

                                                                        TATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCA                    >  SRR4302540.6951633/1‑94 (MQ=60)

                                                                        AATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAGACGCCCAGACAGCTTCTTTAACTGGCGGTAGCAGGGAGATCTCA                    <  SRR4302540.9648666/94‑1 (MQ=60)

                                                                        AATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCGCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCA                    <  SRR4302540.3891112/94‑1 (MQ=60)

                                                                        AATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCA                    <  SRR4302540.97562/94‑1 (MQ=60)

                                                                         ATGACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAG                   <  SRR4302540.2451271/94‑1 (MQ=60)

                                                                           GACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTA                 <  SRR4302540.3795945/94‑1 (MQ=60)

                                                                           GACGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTA                 <  SRR4302540.9888093/94‑1 (MQ=60)

                                                                            ACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAA                <  SRR4302540.4677576/94‑1 (MQ=60)

                                                                             CGTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAA               >  SRR4302540.2252914/1‑94 (MQ=60)

                                                                              GTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAA              >  SRR4302540.2534649/1‑94 (MQ=60)

                                                                              GTCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAA              >  SRR4302540.2277588/1‑94 (MQ=60)

                                                                               TCGGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAAC             <  SRR4302540.8189566/94‑1 (MQ=60)

                                                                                 GGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGG           >  SRR4302540.3265112/1‑94 (MQ=60)

                                                                                 GGCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGG           <  SRR4302540.1575135/94‑1 (MQ=60)

                                                                                  GCTTTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGG          <  SRR4302540.9029017/94‑1 (MQ=60)

                                                                                     TTGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTAT       <  SRR4302540.9178765/94‑1 (MQ=60)

                                                                                      TGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATT      >  SRR4302540.9277498/1‑94 (MQ=60)

                                                                                      TGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATT      <  SRR4302540.8344511/94‑1 (MQ=60)

                                                                                      TGCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTCATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATT      <  SRR4302540.3276761/94‑1 (MQ=60)

                                                                                       GCGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTG     <  SRR4302540.2318626/94‑1 (MQ=60)

                                                                                        CGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGG    <  SRR4302540.5056962/94‑1 (MQ=60)

                                                                                        CGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGG    <  SRR4302540.4347742/94‑1 (MQ=60)

                                                                                        CGCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGAAGGAAGATCTCAGTAAAACGGGTATTGG    >  SRR4302540.7004421/1‑94 (MQ=60)

                                                                                         GCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGG   <  SRR4302540.2100031/94‑1 (MQ=60)

                                                                                         GCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGG   <  SRR4302540.6286250/94‑1 (MQ=60)

                                                                                         GCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGG   <  SRR4302540.6286251/94‑1 (MQ=60)

                                                                                         GCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGG   <  SRR4302540.5397183/94‑1 (MQ=60)

                                                                                         GCGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGG   <  SRR4302540.6979841/94‑1 (MQ=60)

                                                                                          CGACTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGGT  >  SRR4302540.8298347/1‑94 (MQ=60)

GGGTTGCCAGGAGAGCAGTTTGTTGTTTTGCAGATCCACCACCGCTTCGATGATATGTTTGCCGTCGAGCATAATGACGTCGGCTTTGCGCGGCTGGTCAACCGGTTTGTTTTCCAGCGCAAACGCCCAGACAGCTTCTTTATCTGGCGGTAGCAGGGAGATCTCAGTAAAACGGGTATTGGGT  >  NC_000913/1448747‑1448930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`