Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,458,752	T→C	R86R (CGT→CGC)	b1396 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,458,752	0	T	C	100.0%	924.6 / NA	290	R86R (CGT→CGC)	b1396	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (162/128); total (162/128)

Only 100 of 300 total aligned reads displayed.

ATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA  >  NC_000913/1458662‑1458841

aTTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGCCAGCCGTCGCGTCCGTCTGCACGATTGATTTTTTGCGccc                                                                                         >  1:6909559/1‑93 (MQ=255)

 ttttCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCa                                                                                        <  2:9097016/93‑1 (MQ=255)

 ttttCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCa                                                                                        <  2:1753708/93‑1 (MQ=255)

 ttttCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGATGGCCGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGcccg                                                                                        >  1:2694884/1‑92 (MQ=255)

   ttCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGTCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAgg                                                                                      <  1:4495010/93‑1 (MQ=255)

    tCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGc                                                                                     >  2:5455472/1‑93 (MQ=255)

      aCTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCtt                                                                                   <  2:295893/93‑1 (MQ=255)

      aCTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCtt                                                                                   <  1:5252028/93‑1 (MQ=255)

          gCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGACTGCACGATTGATTTTTTGCGCCCAGGCTTTGcc                                                                               <  2:3639155/93‑1 (MQ=255)

           gtGATTCTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGGCGGCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCg                                                                              <  1:8903896/92‑1 (MQ=255)

           cTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCg                                                                              >  1:583319/1‑93 (MQ=255)

            tGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCgg                                                                             >  1:6821009/1‑93 (MQ=255)

              aTACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGgag                                                                           >  2:6100165/1‑93 (MQ=255)

               tACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGgaga                                                                          >  1:10002685/1‑93 (MQ=255)

               tACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGgaga                                                                          <  2:2307013/93‑1 (MQ=255)

                  tGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGacac                                                                       >  2:3339510/1‑93 (MQ=255)

                    ccTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCt                                                                     >  1:2884888/1‑93 (MQ=255)

                     cTTTGCCTACGCCTTCATTAGCCAGGGGCTGGCAGCCTCCGCTTCTGCCTGCACGATTGATTTTTTGCCCCAAGGCTTTGCCGGGGACACCta                                                                    >  2:6890420/1‑92 (MQ=255)

                     cTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCtt                                                                    <  2:8459114/93‑1 (MQ=255)

                       ttGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTaa                                                                  <  1:5535830/93‑1 (MQ=255)

                         gCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACt                                                                >  2:653678/1‑93 (MQ=255)

                          ccTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTg                                                               <  1:2509375/93‑1 (MQ=255)

                           cTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGc                                                              >  2:7768123/1‑93 (MQ=255)

                             aCGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGcca                                                            <  1:4426149/93‑3 (MQ=255)

                              cGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCAc                                                           <  2:8135220/93‑1 (MQ=255)

                               gCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACt                                                          >  2:401267/1‑93 (MQ=255)

                                 cTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTgc                                                        >  1:304019/1‑93 (MQ=255)

                                  tGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTgcg                                                       >  1:4782203/1‑93 (MQ=255)

                                  tGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTgcg                                                       <  1:7448022/93‑1 (MQ=255)

                                   gCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTgcgc                                                      >  2:7250021/1‑93 (MQ=255)

                                    cAATCGCCAGAGCCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCa                                                     <  2:1088173/93‑1 (MQ=255)

                                       tAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGt                                                  >  1:9950379/1‑93 (MQ=255)

                                         gCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTAc                                                >  2:2440920/1‑93 (MQ=255)

                                           cAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGt                                              >  1:3826690/1‑93 (MQ=255)

                                            aGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtc                                             >  2:4212566/1‑93 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtca                                            >  2:4391312/1‑93 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtca                                            >  2:7395423/1‑93 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtca                                            >  1:1482516/1‑93 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtca                                            <  1:9413198/93‑1 (MQ=255)

                                             ggggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtca                                            <  2:5933573/93‑1 (MQ=255)

                                               ggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatc                                          <  1:2342668/93‑1 (MQ=255)

                                               ggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatc                                          <  2:9725277/93‑1 (MQ=255)

                                               ggCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatc                                          <  2:5005493/93‑1 (MQ=255)

                                                gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtcatca                                         <  1:40532/93‑1 (MQ=255)

                                                gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtcatca                                         <  1:1704170/93‑1 (MQ=255)

                                                gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGtcatca                                         <  2:4784295/93‑1 (MQ=255)

                                                gCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGtcatca                                         <  2:6191495/93‑1 (MQ=255)

                                                     cAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgca                                    >  2:199566/1‑93 (MQ=255)

                                                       gCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaag                                  >  1:4085246/1‑93 (MQ=255)

                                                        ccGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagc                                 <  1:1871996/93‑1 (MQ=255)

                                                        ccGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagc                                 >  2:7821172/1‑93 (MQ=255)

                                                         cGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGgcaagca                                >  2:8319996/1‑93 (MQ=255)

                                                         cGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagca                                >  1:7253031/1‑93 (MQ=255)

                                                          gTCGCTTCTGCCTGCACGATTGCTTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGCgcaagcaa                               >  1:2807348/1‑93 (MQ=255)

                                                          gTCGCTTCTGCCTGCACGATTGATTTTTTGCTCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagcaa                               >  1:7720600/1‑93 (MQ=255)

                                                          gTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagcaa                               >  1:8208461/1‑93 (MQ=255)

                                                          gTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGgcaagcaa                               >  2:4525125/1‑93 (MQ=255)

                                                            cgtttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAAc                             <  1:7122999/90‑1 (MQ=255)

                                                            cGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAAc                             <  1:2108133/93‑1 (MQ=255)

                                                             gCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAAcc                            >  2:2852296/1‑93 (MQ=255)

                                                             gCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAAcc                            <  2:1221624/93‑1 (MQ=255)

                                                               ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg                          <  1:1684333/93‑1 (MQ=255)

                                                               ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg                          >  2:6809807/1‑93 (MQ=255)

                                                               ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg                          >  2:3821583/1‑93 (MQ=255)

                                                               ttCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCgg                          <  1:9070470/93‑1 (MQ=255)

                                                                tCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGgt                         >  2:2873947/1‑93 (MQ=255)

                                                                tCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGgt                         >  1:4823363/1‑93 (MQ=255)

                                                                  tgcctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGgtgt                       >  1:8559206/1‑93 (MQ=255)

                                                                   gcctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGtt                      <  2:310733/93‑1 (MQ=255)

                                                                    cctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGttt                     >  1:1178220/1‑93 (MQ=255)

                                                                    cctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGttt                     >  1:9657500/1‑93 (MQ=255)

                                                                     ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTa                    <  1:5378567/93‑1 (MQ=255)

                                                                     ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTa                    >  1:8574714/1‑93 (MQ=255)

                                                                     ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTa                    >  2:7143497/1‑93 (MQ=255)

                                                                     ctgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTa                    <  2:6260403/93‑1 (MQ=255)

                                                                      tgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAc                   >  2:3500837/1‑93 (MQ=255)

                                                                      tgcACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAc                   >  1:3409651/1‑93 (MQ=255)

                                                                        cACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGa                 <  1:345873/93‑1 (MQ=255)

                                                                         aCGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAc                >  1:6381273/1‑93 (MQ=255)

                                                                          cGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACa               >  2:9480932/1‑93 (MQ=255)

                                                                          cGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACa               <  2:1908300/93‑1 (MQ=255)

                                                                           gattgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAt              >  1:1323680/1‑93 (MQ=255)

                                                                           gattgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACAGGTGTTTACGACAt              >  2:9933525/1‑93 (MQ=255)

                                                                            attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc             >  2:3750912/1‑93 (MQ=255)

                                                                            attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc             <  2:601001/93‑1 (MQ=255)

                                                                            attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc             <  2:7674630/93‑1 (MQ=255)

                                                                            attgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATc             <  2:5227880/93‑1 (MQ=255)

                                                                             ttgtttTTTGGCGCCGAGGTTTTGCCGGAGACCCGTTACCTGCCGGTGCGCGGGTGGGTGATGGGGGGAGGGAGGGCGGTGTTTACGACATCg            <  2:9203173/93‑1 (MQ=255)

                                                                             ttgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCg            >  1:4601781/1‑93 (MQ=255)

                                                                              tgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGa           <  2:2245716/93‑1 (MQ=255)

                                                                              tgattTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGa           <  1:5964608/93‑1 (MQ=255)

                                                                                 ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt        >  1:3684885/1‑93 (MQ=255)

                                                                                 ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt        <  1:3232813/93‑1 (MQ=255)

                                                                                 ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt        >  1:8753812/1‑93 (MQ=255)

                                                                                 ttttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAt        <  1:600129/93‑1 (MQ=255)

                                                                                  tttttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAtt       >  1:1218412/1‑93 (MQ=255)

                                                                                   ttttGCGCCCAGGCTTTGCCGGAGACACCTTAGCTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTg      <  2:5737598/93‑1 (MQ=255)

                                                                                    tttGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGt     <  2:6327146/93‑1 (MQ=255)

                                                                                      tGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTa   <  1:8186937/93‑1 (MQ=255)

                                                                                      tGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTa   <  1:8021388/93‑1 (MQ=255)

ATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA  >  NC_000913/1458662‑1458841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA  >  NC_000913/1458659‑1458845

GCTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGC                                                                                               >  SRR4302540.3614645/1‑94 (MQ=60)

GCTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGC                                                                                               >  SRR4302540.2481189/1‑94 (MQ=60)

GCTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGC                                                                                               >  SRR4302540.2481190/1‑94 (MQ=60)

 CTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCC                                                                                              >  SRR4302540.4510330/1‑94 (MQ=60)

 CTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCC                                                                                              >  SRR4302540.5585678/1‑94 (MQ=60)

  TATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCC                                                                                             <  SRR4302540.3171449/94‑1 (MQ=60)

  TATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCC                                                                                             <  SRR4302540.6907604/94‑1 (MQ=60)

  TATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCC                                                                                             >  SRR4302540.6986422/1‑94 (MQ=60)

  TATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGCCAGCCGTCGCGTCCGTCTGCACGATTGATTTTTTGCGCCC                                                                                             >  SRR4302540.6986423/1‑94 (MQ=60)

    TTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAG                                                                                           >  SRR4302540.6245482/1‑94 (MQ=60)

    TTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAG                                                                                           <  SRR4302540.3249885/94‑1 (MQ=60)

    TTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAG                                                                                           <  SRR4302540.1212724/94‑1 (MQ=60)

      TTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGTCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGC                                                                                         <  SRR4302540.4543747/94‑1 (MQ=60)

      TTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGC                                                                                         >  SRR4302540.2182630/1‑94 (MQ=60)

      TTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGC                                                                                         <  SRR4302540.1721157/94‑1 (MQ=60)

       TCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCT                                                                                        >  SRR4302540.4770733/1‑94 (MQ=60)

        CACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTT                                                                                       >  SRR4302540.4630667/1‑94 (MQ=60)

        CACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTT                                                                                       >  SRR4302540.3897558/1‑94 (MQ=60)

         ACTGGCTGATACTGCCTTTGCCTACGCCTGGAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTT                                                                                      <  SRR4302540.1241641/94‑1 (MQ=60)

         ACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTT                                                                                      <  SRR4302540.5309315/94‑1 (MQ=60)

         ACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTT                                                                                      <  SRR4302540.7763100/94‑1 (MQ=60)

         ACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTT                                                                                      <  SRR4302540.1241643/94‑1 (MQ=60)

          CTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTG                                                                                     <  SRR4302540.3052008/94‑1 (MQ=60)

          CTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTG                                                                                     >  SRR4302540.6377550/1‑94 (MQ=60)

          CTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTG                                                                                     >  SRR4302540.9010450/1‑94 (MQ=60)

          CTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCACGCTTTG                                                                                     >  SRR4302540.9010449/1‑94 (MQ=60)

            cacccatactcccttcccctacgccgcccttagcgAGGGGCTGGCAGCCCTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCC                                                                                   <  SRR4302540.540246/59‑1 (MQ=60)

            GGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCC                                                                                   <  SRR4302540.540247/94‑1 (MQ=60)

             GCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCG                                                                                  >  SRR4302540.589622/1‑94 (MQ=60)

             GCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCG                                                                                  >  SRR4302540.3534514/1‑94 (MQ=60)

              GTGATTCTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGGCGGCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGG                                                                                 <  SRR4302540.9006983/94‑1 (MQ=60)

              CTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGG                                                                                 >  SRR4302540.6896521/1‑94 (MQ=60)

               TGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGA                                                                                >  SRR4302540.10126705/1‑94 (MQ=60)

                GATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAG                                                                               >  SRR4302540.2504715/1‑94 (MQ=60)

                GATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAG                                                                               >  SRR4302540.8940329/1‑94 (MQ=60)

                 ATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGA                                                                              >  SRR4302540.10119202/1‑94 (MQ=60)

                  TACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGAC                                                                             <  SRR4302540.4486137/94‑1 (MQ=60)

                  TACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGAC                                                                             <  SRR4302540.9380412/94‑1 (MQ=60)

                   ACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACA                                                                            >  SRR4302540.7356232/1‑94 (MQ=60)

                     TGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACC                                                                          >  SRR4302540.7269746/1‑94 (MQ=60)

                      GCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCT                                                                         >  SRR4302540.2916289/1‑94 (MQ=60)

                       CCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTT                                                                        >  SRR4302540.5633709/1‑94 (MQ=60)

                       CCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTT                                                                        >  SRR4302540.4113911/1‑94 (MQ=60)

                        CTTTGCCTACGCCTGCAATAGCCAGGGGCTGGTAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGTGACACCTTA                                                                       >  SRR4302540.9981138/1‑94 (MQ=60)

                        CTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTA                                                                       >  SRR4302540.7733758/1‑94 (MQ=60)

                         TTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAA                                                                      <  SRR4302540.2958863/94‑1 (MQ=60)

                          TTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAAC                                                                     <  SRR4302540.8723293/94‑1 (MQ=60)

                          TTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAAC                                                                     <  SRR4302540.5596802/94‑1 (MQ=60)

                           TGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACT                                                                    >  SRR4302540.43456/1‑94 (MQ=60)

                            GCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTG                                                                   >  SRR4302540.7122408/1‑94 (MQ=60)

                            GCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTG                                                                   >  SRR4302540.2016880/1‑94 (MQ=60)

                             CCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGC                                                                  <  SRR4302540.2536476/94‑1 (MQ=60)

                              CTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCC                                                                 <  SRR4302540.6056056/94‑1 (MQ=60)

                                ACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTAC                                                               <  SRR4302540.2638723/94‑1 (MQ=60)

                                ACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTAC                                                               <  SRR4302540.5918632/94‑1 (MQ=60)

                                ACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCAC                                                               <  SRR4302540.4474101/94‑1 (MQ=60)

                                ACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCAC                                                               <  SRR4302540.2837828/94‑1 (MQ=60)

                                 CGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACT                                                              <  SRR4302540.2596156/94‑1 (MQ=60)

                                 CGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACT                                                              >  SRR4302540.4049428/1‑94 (MQ=60)

                                  GCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTG                                                             <  SRR4302540.6548062/94‑1 (MQ=60)

                                  GCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTG                                                             >  SRR4302540.4821740/1‑94 (MQ=60)

                                   CCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGC                                                            >  SRR4302540.307039/1‑94 (MQ=60)

                                    CTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCG                                                           >  SRR4302540.4833324/1‑94 (MQ=60)

                                    CTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCG                                                           >  SRR4302540.4543109/1‑94 (MQ=60)

                                     TGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGC                                                          <  SRR4302540.7531030/94‑1 (MQ=60)

                                         ATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGT                                                      >  SRR4302540.10066546/1‑94 (MQ=60)

                                           AGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTAC                                                    <  SRR4302540.1777372/94‑1 (MQ=60)

                                             CCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGT                                                  >  SRR4302540.3868332/1‑94 (MQ=60)

                                             CCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGT                                                  >  SRR4302540.1961318/1‑94 (MQ=60)

                                             CCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGT                                                  >  SRR4302540.3303537/1‑94 (MQ=60)

                                             CCAGGGGCTGGAAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCGTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGT                                                  <  SRR4302540.5074786/94‑1 (MQ=60)

                                              CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTC                                                 >  SRR4302540.3463371/1‑94 (MQ=60)

                                              CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTC                                                 <  SRR4302540.558883/94‑1 (MQ=60)

                                              CAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTC                                                 >  SRR4302540.9671214/1‑94 (MQ=60)

                                               AGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCA                                                >  SRR4302540.1498781/1‑94 (MQ=60)

                                               AGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCA                                                <  SRR4302540.5578294/94‑1 (MQ=60)

                                               AGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCA                                                >  SRR4302540.3831632/1‑94 (MQ=60)

                                                GGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCAT                                               <  SRR4302540.9525116/94‑1 (MQ=60)

                                                 GGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATC                                              <  SRR4302540.1196159/94‑1 (MQ=60)

                                                  GGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCA                                             <  SRR4302540.2367909/94‑1 (MQ=60)

                                                   GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACCCCTTAACTGCTACTGCGCAGGTACGTCATCAG                                            <  SRR4302540.40952/94‑1 (MQ=60)

                                                   GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAG                                            <  SRR4302540.1722603/94‑1 (MQ=60)

                                                   GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAG                                            <  SRR4302540.40949/94‑1 (MQ=60)

                                                   GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAG                                            <  SRR4302540.572856/94‑1 (MQ=60)

                                                   GCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCACAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAG                                            <  SRR4302540.3355718/94‑1 (MQ=60)

                                                    CTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGG                                           >  SRR4302540.1455087/1‑94 (MQ=60)

                                                     TGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGG                                          <  SRR4302540.6061725/94‑1 (MQ=60)

                                                     TGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGG                                          >  SRR4302540.875852/1‑94 (MQ=60)

                                                        CAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAA                                       <  SRR4302540.3855978/94‑1 (MQ=60)

                                                        CAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAA                                       <  SRR4302540.5282010/94‑1 (MQ=60)

                                                         AGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAG                                      >  SRR4302540.4129302/1‑94 (MQ=60)

                                                           CCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCA                                    >  SRR4302540.7333972/1‑94 (MQ=60)

                                                           CCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCA                                    <  SRR4302540.1892508/94‑1 (MQ=60)

                                                            CGTCGCTTCTGCCTGCACGATTGCTTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGCGCAAGCAA                                   >  SRR4302540.2837667/1‑94 (MQ=60)

                                                            CGTCGCTTCTGCCTGCACGATTGATTTTTTGCTCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAA                                   >  SRR4302540.7810155/1‑94 (MQ=60)

                                                            CGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAA                                   >  SRR4302540.2837668/1‑94 (MQ=60)

                                                            CGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAA                                   >  SRR4302540.7810159/1‑94 (MQ=60)

                                                            CGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAA                                   >  SRR4302540.8303855/1‑94 (MQ=60)

                                                            CGTCGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCACGGCAACCAA                                   >  SRR4302540.8303854/1‑94 (MQ=60)

                                                               CGTTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC                                <  SRR4302540.7202314/94‑1 (MQ=60)

                                                               CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACC                                <  SRR4302540.2130758/94‑1 (MQ=60)

                                                               CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC                                >  SRR4302540.8290591/1‑94 (MQ=60)

                                                               CGCTTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACC                                >  SRR4302540.1040055/1‑94 (MQ=60)

                                                               CGCGTCTGCCTGCACGAGTGAGTCTTTGCGCCCAGGCGTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACC                                <  SRR4302540.2130759/94‑1 (MQ=60)

                                                                  TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGT                             <  SRR4302540.1702611/94‑1 (MQ=60)

                                                                  TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGT                             <  SRR4302540.9179399/94‑1 (MQ=60)

                                                                  TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGT                             >  SRR4302540.4875003/1‑94 (MQ=60)

                                                                  TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGT                             >  SRR4302540.4875002/1‑94 (MQ=60)

                                                                  TTCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGG                             >  SRR4302540.4875001/1‑94 (MQ=60)

                                                                   TCTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTG                            >  SRR4302540.726061/1‑94 (MQ=60)

                                                                    CTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGT                           >  SRR4302540.8658618/1‑94 (MQ=60)

                                                                    CTGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGT                           >  SRR4302540.6965960/1‑94 (MQ=60)

                                                                     TGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTT                          >  SRR4302540.2465922/1‑94 (MQ=60)

                                                                     TGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTT                          <  SRR4302540.2822927/94‑1 (MQ=60)

                                                                     TGCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTT                          >  SRR4302540.1713274/1‑94 (MQ=60)

                                                                      GCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTT                         >  SRR4302540.1190398/1‑94 (MQ=60)

                                                                      GCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTT                         <  SRR4302540.1409331/94‑1 (MQ=60)

                                                                      GCCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTT                         >  SRR4302540.9771189/1‑94 (MQ=60)

                                                                       CCTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTA                        >  SRR4302540.8674346/1‑94 (MQ=60)

                                                                        CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC                       <  SRR4302540.4584277/94‑1 (MQ=60)

                                                                        CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC                       <  SRR4302540.5437717/94‑1 (MQ=60)

                                                                        CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC                       <  SRR4302540.5437718/94‑1 (MQ=60)

                                                                        CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC                       >  SRR4302540.3446789/1‑94 (MQ=60)

                                                                        CTGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTAC                       >  SRR4302540.3446790/1‑94 (MQ=60)

                                                                         TGCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACG                      <  SRR4302540.7909669/94‑1 (MQ=60)

                                                                          GCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGA                     >  SRR4302540.8568075/1‑94 (MQ=60)

                                                                          GCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGA                     >  SRR4302540.2824803/1‑94 (MQ=60)

                                                                          GCACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGA                     >  SRR4302540.7525440/1‑94 (MQ=60)

                                                                           CACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAC                    <  SRR4302540.1837813/94‑1 (MQ=60)

                                                                           CACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAC                    >  SRR4302540.6452316/1‑94 (MQ=60)

                                                                           CACGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGAC                    <  SRR4302540.349393/94‑1 (MQ=60)

                                                                             CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT                  >  SRR4302540.1337482/1‑94 (MQ=60)

                                                                             CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT                  >  SRR4302540.7079941/1‑94 (MQ=60)

                                                                             CGATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACAT                  <  SRR4302540.6518629/94‑1 (MQ=60)

                                                                              GATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATC                 <  SRR4302540.5963360/94‑1 (MQ=60)

                                                                              GATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATC                 <  SRR4302540.8643381/94‑1 (MQ=60)

                                                                              GATTGATTGTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATC                 <  SRR4302540.4395850/94‑1 (MQ=60)

                                                                               ATTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCG                >  SRR4302540.4651230/1‑94 (MQ=60)

                                                                                TTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGA               >  SRR4302540.98829/1‑94 (MQ=60)

                                                                                TTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGA               <  SRR4302540.1532953/94‑1 (MQ=60)

                                                                                TTGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGA               <  SRR4302540.1532954/94‑1 (MQ=60)

                                                                                 TGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAA              >  SRR4302540.8893791/1‑94 (MQ=60)

                                                                                 TGATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAA              <  SRR4302540.6030605/94‑1 (MQ=60)

                                                                                   ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT            <  SRR4302540.10109236/94‑1 (MQ=60)

                                                                                   ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT            >  SRR4302540.3204810/1‑94 (MQ=60)

                                                                                   ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT            >  SRR4302540.3725152/1‑94 (MQ=60)

                                                                                   ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT            >  SRR4302540.8855362/1‑94 (MQ=60)

                                                                                   ATTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAAT            >  SRR4302540.8276261/1‑94 (MQ=60)

                                                                                    TTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT           <  SRR4302540.3267966/94‑1 (MQ=60)

                                                                                    TTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT           <  SRR4302540.606562/94‑1 (MQ=60)

                                                                                    TTTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT           >  SRR4302540.1230883/1‑94 (MQ=60)

                                                                                    TTTGTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATT           <  SRR4302540.9447865/94‑1 (MQ=60)

                                                                                     TTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTG          <  SRR4302540.8666537/94‑1 (MQ=60)

                                                                                     TTTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTG          <  SRR4302540.8666538/94‑1 (MQ=60)

                                                                                      TTTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGT         <  SRR4302540.3580196/94‑1 (MQ=60)

                                                                                       TTTGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTT        >  SRR4302540.9562762/1‑94 (MQ=60)

                                                                                         TGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA      <  SRR4302540.8282047/94‑1 (MQ=60)

                                                                                         TGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA      <  SRR4302540.8282046/94‑1 (MQ=60)

                                                                                         TGCGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAA      <  SRR4302540.8114681/94‑1 (MQ=60)

                                                                                           CGCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACC    <  SRR4302540.7182483/94‑1 (MQ=60)

                                                                                            GCCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCA   >  SRR4302540.9904188/1‑94 (MQ=60)

                                                                                            GCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCA   >  SRR4302540.4292241/1‑94 (MQ=60)

                                                                                            GCCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCA   >  SRR4302540.7478454/1‑94 (MQ=60)

                                                                                             CCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA  >  SRR4302540.3461364/1‑94 (MQ=60)

                                                                                             CCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA  <  SRR4302540.1586439/94‑1 (MQ=60)

                                                                                             CCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA  >  SRR4302540.7953256/1‑94 (MQ=60)

                                                                                             CCCAGGCTTTGCCGGAGACACCTTAACTGCCACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA  >  SRR4302540.7866946/1‑94 (MQ=60)

GCTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAA  >  NC_000913/1458659‑1458845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`