Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,799,569 G→A N342N (AAC→AAT)  thrS ← threonine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,799,5690GA99.6% 1008.7 / ‑5.3 277N342N (AAC→AAT) thrSthreonine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (116/160);  total (116/161)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.12e-01

Only 100 of 290 total aligned reads displayed.

GCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTA  >  NC_000913/1799479‑1799658
                                                                                          |                                                                                         
   aTGCAGCGAACCTGACGGCTCGTTACGGGGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaa                                                                                      >  1:6787798/1‑93 (MQ=255)
    tGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaaa                                                                                     >  1:183040/1‑93 (MQ=255)
    tGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaaa                                                                                     >  2:2307344/1‑93 (MQ=255)
    tGCAGCGAACCTGACGGCTCGTTACGGTGGAAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGCTAAGACTTCAGCCCCTGATTGaaa                                                                                     >  2:6890529/1‑93 (MQ=255)
     gCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaaaa                                                                                    <  1:5959924/93‑1 (MQ=255)
      cAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAt                                                                                   <  1:1135379/93‑1 (MQ=255)
       aGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAtt                                                                                  <  1:6904586/93‑1 (MQ=255)
        gCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAttt                                                                                 <  1:5874809/93‑1 (MQ=255)
         cGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTg                                                                                <  1:8551337/93‑1 (MQ=255)
           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              >  1:573238/1‑93 (MQ=255)
           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              <  1:6723925/93‑1 (MQ=255)
           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              <  2:5797386/93‑1 (MQ=255)
            aCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTAc                                                                             >  2:5837717/1‑93 (MQ=255)
             ccTGACGGCTTGTTACGGGGGCCGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGtcgg                                                                            >  2:2650485/1‑90 (MQ=255)
             ccTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACg                                                                            <  1:4122098/93‑1 (MQ=255)
              cTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGt                                                                           >  1:6996282/1‑93 (MQ=255)
               tGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTg                                                                          >  1:1933405/1‑93 (MQ=255)
                gACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGa                                                                         >  1:349138/1‑93 (MQ=255)
                 aCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAc                                                                        <  2:1666601/93‑1 (MQ=255)
                  cGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAcc                                                                       >  2:5693223/1‑93 (MQ=255)
                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      >  1:8123232/1‑93 (MQ=255)
                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      <  2:8388250/93‑1 (MQ=255)
                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      <  2:9850023/93‑1 (MQ=255)
                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      <  1:3715607/93‑1 (MQ=255)
                     cTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGGGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCgg                                                                    >  1:8032328/1‑93 (MQ=255)
                      tCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCggg                                                                   >  1:4911929/1‑93 (MQ=255)
                      tCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCggg                                                                   >  1:7062379/1‑93 (MQ=255)
                       cGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGc                                                                  >  2:8433697/1‑93 (MQ=255)
                        gTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCa                                                                 <  2:8249342/93‑1 (MQ=255)
                        gTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCa                                                                 <  2:338669/93‑1 (MQ=255)
                        gTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCa                                                                 <  1:7436790/93‑1 (MQ=255)
                         ttACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAg                                                                >  1:2063655/1‑93 (MQ=255)
                          tACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGt                                                               >  1:9599957/1‑93 (MQ=255)
                           aCGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGtt                                                              >  2:4752101/1‑93 (MQ=255)
                             ggTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCa                                                            <  1:8775816/93‑1 (MQ=255)
                               tGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATc                                                          >  2:2786171/1‑93 (MQ=255)
                               tGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATc                                                          <  2:2492093/93‑1 (MQ=255)
                               tGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATc                                                          <  2:4167628/93‑1 (MQ=255)
                                ggCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCg                                                         <  2:5989301/93‑1 (MQ=255)
                                    gCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCtt                                                     >  1:7161183/1‑93 (MQ=255)
                                     cTACCTAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCGGTTCATCGGCTTa                                                    >  2:4262584/1‑93 (MQ=255)
                                      tACCAAACTCGGTCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTaa                                                   <  2:9533375/93‑1 (MQ=255)
                                      tACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTaa                                                   >  1:9821823/1‑93 (MQ=255)
                                      tACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTaa                                                   <  2:819835/93‑1 (MQ=255)
                                       aCCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAt                                                  >  1:3285066/1‑93 (MQ=255)
                                            aCTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGt                                             <  1:5470117/93‑1 (MQ=255)
                                              tCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAt                                           <  2:7322140/93‑1 (MQ=255)
                                              tCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAt                                           <  1:1466769/93‑1 (MQ=255)
                                               cGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAtt                                          <  1:2693582/93‑1 (MQ=255)
                                               cGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAtt                                          <  2:305430/93‑1 (MQ=255)
                                               cGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAtt                                          >  1:9498084/1‑93 (MQ=255)
                                                 gCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                        <  2:1020969/93‑1 (MQ=255)
                                                 gCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                        <  2:8633051/93‑1 (MQ=255)
                                                 gCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                        <  2:7894724/93‑1 (MQ=255)
                                                  ccATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAc                                       <  2:1067360/93‑1 (MQ=255)
                                                   cATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACg                                      >  1:1368241/1‑93 (MQ=255)
                                                    aTACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACgg                                     <  1:8286353/93‑1 (MQ=255)
                                                     tACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGt                                    >  1:9879212/1‑93 (MQ=255)
                                                     tACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGt                                    >  1:6857033/1‑93 (MQ=255)
                                                      aCGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGtt                                   <  1:7307878/93‑1 (MQ=255)
                                                       cGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTtc                                  <  2:3162875/93‑1 (MQ=255)
                                                         cAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTtctc                                <  1:6519840/93‑1 (MQ=255)
                                                           gCGGGAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCag                              <  1:2465587/93‑1 (MQ=255)
                                                           gCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCag                              >  1:5635896/1‑93 (MQ=255)
                                                            cGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCaga                             <  2:7224368/93‑1 (MQ=255)
                                                             ggCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaa                            <  2:6667023/93‑1 (MQ=255)
                                                              gCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaag                           >  2:4455576/1‑93 (MQ=255)
                                                               cAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaaga                          <  2:5431115/93‑1 (MQ=255)
                                                                 gATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtg                        >  2:6225373/1‑93 (MQ=255)
                                                                  aTCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtgt                       <  2:1588447/93‑1 (MQ=255)
                                                                      cgATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATgtggtg                   >  1:4734953/1‑93 (MQ=255)
                                                                       gATAAGACTTCATCCCCTGATTGAAAAGTTGTACCGGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGa                  <  1:2567228/93‑1 (MQ=255)
                                                                       gATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGa                  <  1:10011267/93‑1 (MQ=255)
                                                                       gATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGa                  >  2:139653/1‑93 (MQ=255)
                                                                         tAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAAc                >  1:5011674/1‑93 (MQ=255)
                                                                         tAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAAc                <  1:3017632/93‑1 (MQ=255)
                                                                          aaGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGaaat               >  2:1820489/1‑91 (MQ=255)
                                                                          aaGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACa               <  1:4287497/93‑1 (MQ=255)
                                                                          aaGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACa               <  2:4053758/93‑1 (MQ=255)
                                                                          aaGACTTCAGCCCCTGAGTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACa               <  1:8902034/93‑1 (MQ=255)
                                                                           aGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAt              <  2:8814896/93‑1 (MQ=255)
                                                                            gACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAtt             >  1:666724/1‑93 (MQ=255)
                                                                            gACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAtt             >  1:4402150/1‑93 (MQ=255)
                                                                              cTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGc           <  1:3834562/93‑1 (MQ=255)
                                                                              cTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGc           <  2:7591808/93‑1 (MQ=255)
                                                                                tCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCAt         >  2:2168758/1‑93 (MQ=255)
                                                                                  aGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt       <  1:9339168/93‑1 (MQ=255)
                                                                                  aGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt       <  2:9269865/93‑1 (MQ=255)
                                                                                  aGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt       <  2:3646618/93‑1 (MQ=255)
                                                                                  aGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt       <  2:4775638/93‑1 (MQ=255)
                                                                                   gCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCtt      <  1:9141803/93‑1 (MQ=255)
                                                                                   gCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCtt      >  2:679584/1‑93 (MQ=255)
                                                                                    ccccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCttt     >  1:8463985/1‑93 (MQ=255)
                                                                                    ccccTGATTGAAAATTTGTACGTGACCCGGGCAGTACATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCttt     >  1:3589560/1‑93 (MQ=255)
                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   >  1:3382321/1‑93 (MQ=255)
                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   >  2:705728/1‑93 (MQ=255)
                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   <  2:132452/93‑1 (MQ=255)
                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   <  2:3946004/93‑1 (MQ=255)
                                                                                       cTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTa  <  2:8705776/93‑1 (MQ=255)
                                                                                       cTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTa  <  2:2038897/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTA  >  NC_000913/1799479‑1799658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTG  >  NC_000913/1799477‑1799662
                                                                                            |                                                                                             
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAT                                                                                              >  SRR4302540.5717713/1‑94 (MQ=60)
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAT                                                                                              <  SRR4302540.4018028/94‑1 (MQ=60)
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAT                                                                                              <  SRR4302540.6350357/94‑1 (MQ=60)
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAT                                                                                              <  SRR4302540.6350356/94‑1 (MQ=60)
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAT                                                                                              <  SRR4302540.3472548/94‑1 (MQ=60)
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGAT                                                                                              <  SRR4302540.1822655/94‑1 (MQ=60)
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGAAGATCGCGATAAGACTTCAGCCCCTGAT                                                                                              >  SRR4302540.4455664/1‑94 (MQ=60)
 GGCCATGCAGCGAACCTGACGGCTCGTTACGGTAGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATT                                                                                             <  SRR4302540.9823857/94‑1 (MQ=60)
  GCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTG                                                                                            <  SRR4302540.1857502/94‑1 (MQ=60)
    CATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGCTTGAA                                                                                          >  SRR4302540.4427399/1‑94 (MQ=60)
    CATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAA                                                                                          >  SRR4302540.6713588/1‑94 (MQ=60)
    CATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGACTGAA                                                                                          >  SRR4302540.1458150/1‑94 (MQ=60)
    CATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCCCGATAAGACTTCAGCCCCTGATTGAA                                                                                          >  SRR4302540.8621294/1‑94 (MQ=60)
    CATGCAGCGAACCTGACGGCTCGTTACGGGGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAA                                                                                          >  SRR4302540.6862863/1‑94 (MQ=60)
     ATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAA                                                                                         >  SRR4302540.184859/1‑94 (MQ=60)
     ATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAA                                                                                         >  SRR4302540.10150318/1‑94 (MQ=60)
       GCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAT                                                                                       <  SRR4302540.6025850/94‑1 (MQ=60)
       GCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAT                                                                                       >  SRR4302540.2417184/1‑94 (MQ=60)
        CAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATT                                                                                      <  SRR4302540.1147217/94‑1 (MQ=60)
        CAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATT                                                                                      >  SRR4302540.4350303/1‑94 (MQ=60)
         AGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATCAGACTTCAGCCCCTGATTGAAAATTT                                                                                     >  SRR4302540.9797061/1‑94 (MQ=60)
         AGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTT                                                                                     <  SRR4302540.6981347/94‑1 (MQ=60)
          GCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTG                                                                                    <  SRR4302540.5939749/94‑1 (MQ=60)
          GCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTG                                                                                    >  SRR4302540.1536029/1‑94 (MQ=60)
           CGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGT                                                                                   <  SRR4302540.8650668/94‑1 (MQ=60)
            GAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTA                                                                                  >  SRR4302540.579460/1‑94 (MQ=60)
             AACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGGTCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTAC                                                                                 >  SRR4302540.8967820/1‑94 (MQ=60)
             AACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTAC                                                                                 <  SRR4302540.6914115/94‑1 (MQ=60)
             AACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTAC                                                                                 <  SRR4302540.9935481/94‑1 (MQ=60)
             AACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTAC                                                                                 <  SRR4302540.6798144/94‑1 (MQ=60)
             AACCGGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTAC                                                                                 <  SRR4302540.3412271/94‑1 (MQ=60)
              ACCTGACGGCTCGTTTCGGTGGCAGCGCCCAAGCTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACG                                                                                <  SRR4302540.6990061/94‑1 (MQ=60)
              ACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACG                                                                                <  SRR4302540.2997734/94‑1 (MQ=60)
               CCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGT                                                                               >  SRR4302540.7073933/1‑94 (MQ=60)
               CCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGT                                                                               <  SRR4302540.4166615/94‑1 (MQ=60)
               CCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGT                                                                               >  SRR4302540.6005518/1‑94 (MQ=60)
                CTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTG                                                                              >  SRR4302540.7106797/1‑94 (MQ=60)
                CTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTG                                                                              >  SRR4302540.1954476/1‑94 (MQ=60)
                 TGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGA                                                                             >  SRR4302540.352701/1‑94 (MQ=60)
                  GACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAC                                                                            >  SRR4302540.5223417/1‑94 (MQ=60)
                    CGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCC                                                                          <  SRR4302540.7280865/94‑1 (MQ=60)
                    CGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCC                                                                          >  SRR4302540.8217517/1‑94 (MQ=60)
                     GGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCG                                                                         >  SRR4302540.1352106/1‑94 (MQ=60)
                     GGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCG                                                                         <  SRR4302540.5813520/94‑1 (MQ=60)
                     GGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCG                                                                         <  SRR4302540.3756146/94‑1 (MQ=60)
                      GCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGGGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGG                                                                        >  SRR4302540.8125712/1‑94 (MQ=60)
                       CTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGG                                                                       >  SRR4302540.3665876/1‑94 (MQ=60)
                       CTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGG                                                                       >  SRR4302540.4078887/1‑94 (MQ=60)
                       CTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGG                                                                       >  SRR4302540.4964821/1‑94 (MQ=60)
                       CTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGG                                                                       >  SRR4302540.7140930/1‑94 (MQ=60)
                       CTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATAGCGATAAGAGTTCAGGCCCTGATTGAAAATGTGTACGTGACCCGGG                                                                       >  SRR4302540.7140931/1‑94 (MQ=60)
                          GTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAG                                                                    >  SRR4302540.2085861/1‑94 (MQ=60)
                          GTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAG                                                                    <  SRR4302540.7519653/94‑1 (MQ=60)
                          GTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAG                                                                    >  SRR4302540.2553965/1‑94 (MQ=60)
                          GTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAG                                                                    >  SRR4302540.2553966/1‑94 (MQ=60)
                           TTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGT                                                                   >  SRR4302540.9713207/1‑94 (MQ=60)
                            TACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTT                                                                  <  SRR4302540.6015359/94‑1 (MQ=60)
                            TACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTT                                                                  <  SRR4302540.34731/94‑1 (MQ=60)
                            TACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTT                                                                  <  SRR4302540.8036116/94‑1 (MQ=60)
                               GGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCAT                                                               <  SRR4302540.8877468/94‑1 (MQ=60)
                                GTAGCAGCTACCAAACTCGGCCATACGCAGCTGCAGATCGCGATAAGACTTCAGCCCCAAATTGAAAATTTGTACGTGACCCGGGCAGTTCATC                                                              <  SRR4302540.10044783/94‑1 (MQ=60)
                                 TGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCG                                                             >  SRR4302540.7128258/1‑94 (MQ=60)
                                 TGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCG                                                             >  SRR4302540.188906/1‑94 (MQ=60)
                                 TGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCG                                                             <  SRR4302540.4968347/94‑1 (MQ=60)
                                     AGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTT                                                         >  SRR4302540.7241005/1‑94 (MQ=60)
                                     AGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTT                                                         >  SRR4302540.8212898/1‑94 (MQ=60)
                                      GCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTA                                                        >  SRR4302540.5002214/1‑94 (MQ=60)
                                       CTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAA                                                       >  SRR4302540.9936735/1‑94 (MQ=60)
                                       CTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAA                                                       <  SRR4302540.6892179/94‑1 (MQ=60)
                                       CTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAA                                                       <  SRR4302540.5569640/94‑1 (MQ=60)
                                        TACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAT                                                      <  SRR4302540.8721616/94‑1 (MQ=60)
                                        TACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAT                                                      <  SRR4302540.8721617/94‑1 (MQ=60)
                                        TACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAT                                                      >  SRR4302540.3320981/1‑94 (MQ=60)
                                         CCCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATG                                                     <  SRR4302540.2910019/94‑1 (MQ=60)
                                           CAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCA                                                   <  SRR4302540.9383786/94‑1 (MQ=60)
                                             AACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTCCGTGACCCGGGCAGTTCATCGGCTTAATGCAGT                                                 >  SRR4302540.9784320/1‑94 (MQ=60)
                                              ACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTA                                                <  SRR4302540.5530334/94‑1 (MQ=60)
                                              ACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTA                                                >  SRR4302540.9486994/1‑94 (MQ=60)
                                              ACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTA                                                <  SRR4302540.9698539/94‑1 (MQ=60)
                                              ACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTA                                                <  SRR4302540.9698540/94‑1 (MQ=60)
                                                TCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATT                                              <  SRR4302540.1482773/94‑1 (MQ=60)
                                                TCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATT                                              <  SRR4302540.1482772/94‑1 (MQ=60)
                                                TCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATT                                              >  SRR4302540.9610642/1‑94 (MQ=60)
                                                 CGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTC                                             <  SRR4302540.5867959/94‑1 (MQ=60)
                                                 CGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTC                                             >  SRR4302540.421741/1‑94 (MQ=60)
                                                 CGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTC                                             <  SRR4302540.2722664/94‑1 (MQ=60)
                                                  GGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCA                                            <  SRR4302540.6798730/94‑1 (MQ=60)
                                                   GCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAC                                           <  SRR4302540.61641/94‑1 (MQ=60)
                                                   GCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAC                                           <  SRR4302540.61642/94‑1 (MQ=60)
                                                   GCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAC                                           <  SRR4302540.7210647/94‑1 (MQ=60)
                                                    CCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACG                                          >  SRR4302540.1382728/1‑94 (MQ=60)
                                                     CATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGG                                         <  SRR4302540.2049918/94‑1 (MQ=60)
                                                     CATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGG                                         <  SRR4302540.3832767/94‑1 (MQ=60)
                                                      ATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGT                                        >  SRR4302540.9994584/1‑94 (MQ=60)
                                                      ATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGT                                        >  SRR4302540.6933012/1‑94 (MQ=60)
                                                      ATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGT                                        <  SRR4302540.8382593/94‑1 (MQ=60)
                                                      ATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGT                                        >  SRR4302540.6933009/1‑94 (MQ=60)
                                                      ATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGT                                        >  SRR4302540.3133160/1‑94 (MQ=60)
                                                      ATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGT                                        >  SRR4302540.4313423/1‑94 (MQ=60)
                                                      ATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGT                                        >  SRR4302540.220880/1‑94 (MQ=60)
                                                        ACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC                                      <  SRR4302540.7389464/94‑1 (MQ=60)
                                                         CGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCT                                     <  SRR4302540.8177115/94‑1 (MQ=60)
                                                         CGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCT                                     <  SRR4302540.3560830/94‑1 (MQ=60)
                                                           CAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCA                                   <  SRR4302540.8574624/94‑1 (MQ=60)
                                                           CAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCA                                   <  SRR4302540.7426665/94‑1 (MQ=60)
                                                           CAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCA                                   <  SRR4302540.6592260/94‑1 (MQ=60)
                                                            AGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAG                                  >  SRR4302540.5697920/1‑94 (MQ=60)
                                                             GCGGGAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGA                                 <  SRR4302540.2492123/94‑1 (MQ=60)
                                                             GCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGA                                 <  SRR4302540.5792511/94‑1 (MQ=60)
                                                              CGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAA                                >  SRR4302540.8555067/1‑94 (MQ=60)
                                                              CGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCACCGGCTTAATGCAGTACTCACGGCTCTCAAAA                                >  SRR4302540.8555068/1‑94 (MQ=60)
                                                               GGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAG                               >  SRR4302540.6704375/1‑94 (MQ=60)
                                                                 aagagcgcaatacGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAT                             <  SRR4302540.9235828/81‑1 (MQ=60)
                                                                 CAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAT                             <  SRR4302540.3736162/94‑1 (MQ=60)
                                                                 CAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAT                             <  SRR4302540.8228605/94‑1 (MQ=60)
                                                                 CAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAT                             <  SRR4302540.7055671/94‑1 (MQ=60)
                                                                 CAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAT                             <  SRR4302540.3367769/94‑1 (MQ=60)
                                                                  AGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATG                            >  SRR4302540.1705303/1‑94 (MQ=60)
                                                                   GACCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTGCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGT                           <  SRR4302540.117433/94‑1 (MQ=60)
                                                                    ATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTG                          >  SRR4302540.5418806/1‑94 (MQ=60)
                                                                      CGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGT                        <  SRR4302540.5618697/94‑1 (MQ=60)
                                                                      CGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGT                        >  SRR4302540.2623563/1‑94 (MQ=60)
                                                                      CGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGT                        <  SRR4302540.5769510/94‑1 (MQ=60)
                                                                       GCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTG                       >  SRR4302540.4785507/1‑94 (MQ=60)
                                                                        CGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGA                      >  SRR4302540.732435/1‑94 (MQ=60)
                                                                         GATAAGACTTCATCCCCTGATTGAAAAGTTGTACCGGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAA                     <  SRR4302540.2594907/94‑1 (MQ=60)
                                                                         GATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAA                     <  SRR4302540.10127838/94‑1 (MQ=60)
                                                                         GATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAA                     <  SRR4302540.2594908/94‑1 (MQ=60)
                                                                          ATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAAC                    >  SRR4302540.2078330/1‑94 (MQ=60)
                                                                          ATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAAC                    >  SRR4302540.5065937/1‑94 (MQ=60)
                                                                          ATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAAC                    >  SRR4302540.6947681/1‑94 (MQ=60)
                                                                           TAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACA                   <  SRR4302540.3050803/94‑1 (MQ=60)
                                                                            AAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAT                  >  SRR4302540.7669860/1‑94 (MQ=60)
                                                                            AAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAT                  <  SRR4302540.9005087/94‑1 (MQ=60)
                                                                            AAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAT                  <  SRR4302540.4334138/94‑1 (MQ=60)
                                                                            AAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAT                  <  SRR4302540.4521894/94‑1 (MQ=60)
                                                                            AAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAT                  <  SRR4302540.6797339/94‑1 (MQ=60)
                                                                            AAGACTTCAGCCCCTGAGTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAT                  <  SRR4302540.9005086/94‑1 (MQ=60)
                                                                             AGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATT                 >  SRR4302540.674165/1‑94 (MQ=60)
                                                                             AGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATT                 >  SRR4302540.673874/1‑94 (MQ=60)
                                                                             AGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATT                 >  SRR4302540.4449886/1‑94 (MQ=60)
                                                                             AGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATT                 <  SRR4302540.7393741/94‑1 (MQ=60)
                                                                                CTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCA              <  SRR4302540.3876286/94‑1 (MQ=60)
                                                                                CTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCA              >  SRR4302540.8986069/1‑94 (MQ=60)
                                                                                 TTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCAT             <  SRR4302540.3492576/94‑1 (MQ=60)
                                                                                    AGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTT          <  SRR4302540.3780262/94‑1 (MQ=60)
                                                                                    AGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTT          >  SRR4302540.9985011/1‑94 (MQ=60)
                                                                                    AGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTT          <  SRR4302540.9450471/94‑1 (MQ=60)
                                                                                     TCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTT         <  SRR4302540.4794287/94‑1 (MQ=60)
                                                                                     GCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTT         >  SRR4302540.8562265/1‑94 (MQ=60)
                                                                                     GCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTT         <  SRR4302540.9251629/94‑1 (MQ=60)
                                                                                     GCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTT         <  SRR4302540.4064083/94‑1 (MQ=60)
                                                                                     GCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTACATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTT         >  SRR4302540.3628770/1‑94 (MQ=60)
                                                                                      CCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTG        >  SRR4302540.355071/1‑94 (MQ=60)
                                                                                      CCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTG        >  SRR4302540.9451579/1‑94 (MQ=60)
                                                                                      CCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTG        >  SRR4302540.9380638/1‑94 (MQ=60)
                                                                                       CCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGT       >  SRR4302540.3419240/1‑94 (MQ=60)
                                                                                         CTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAG     >  SRR4302540.744654/1‑94 (MQ=60)
                                                                                         CTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAG     >  SRR4302540.4131970/1‑94 (MQ=60)
                                                                                         CTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAG     >  SRR4302540.7148435/1‑94 (MQ=60)
                                                                                         CTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAG     >  SRR4302540.3820055/1‑94 (MQ=60)
                                                                                         CTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAG     <  SRR4302540.4765505/94‑1 (MQ=60)
                                                                                          TGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGT    <  SRR4302540.7478978/94‑1 (MQ=60)
                                                                                          TGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGT    >  SRR4302540.22343/1‑94 (MQ=60)
                                                                                          TGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGT    >  SRR4302540.6883690/1‑94 (MQ=60)
                                                                                          TGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGT    >  SRR4302540.9162206/1‑94 (MQ=60)
                                                                                           GATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTT   >  SRR4302540.4116107/1‑94 (MQ=60)
                                                                                           GATTGAAAAGTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTT   <  SRR4302540.9372492/94‑1 (MQ=60)
                                                                                            ATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTG  >  SRR4302540.6306300/1‑94 (MQ=60)
                                                                                            ATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTG  >  SRR4302540.7712350/1‑94 (MQ=60)
                                                                                            |                                                                                             
AGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTG  >  NC_000913/1799477‑1799662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑