Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,111,654 T→C A232A (GCA→GCG)  galF ← putative a UDP‑gal transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,111,6540TC99.7% 974.3 / ‑5.1 304A232A (GCA→GCG) galFputative a UDP‑gal transferase
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (139/164);  total (140/164)
Fisher's exact test for biased strand distribution p-value = 4.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.95e-01

Only 100 of 321 total aligned reads displayed.

TCGTAACTGTCGCCGGTCATCAGCATTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCATGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGC  >  NC_000913/2111565‑2111744
                                                                                         |                                                                                          
tCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCa                                                                                         >  2:7474606/1‑93 (MQ=255)
tCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCa                                                                                         >  1:9232013/1‑93 (MQ=255)
 cGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCAc                                                                                        <  2:2760043/93‑1 (MQ=255)
   tAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCa                                                                                      >  1:255989/1‑93 (MQ=255)
   caaCTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCa                                                                                      <  2:2899804/92‑1 (MQ=255)
     aCTGTCGCCGGGCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCCGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCGACGCACCCgg                                                                                    >  2:3045621/1‑93 (MQ=255)
      cTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGc                                                                                   >  2:7197581/1‑93 (MQ=255)
      cTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGc                                                                                   >  1:3255907/1‑93 (MQ=255)
       tGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCt                                                                                  >  2:3554993/1‑93 (MQ=255)
         tCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGTAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGa                                                                                <  2:2556755/93‑1 (MQ=255)
         tCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTTCCCACGCACCAGGCTGa                                                                                >  1:8824481/1‑93 (MQ=255)
         tCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGa                                                                                <  2:9769781/93‑1 (MQ=255)
         tCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGa                                                                                <  2:4776120/93‑1 (MQ=255)
          cGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAg                                                                               <  1:5620087/93‑1 (MQ=255)
            ccGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTa                                                                             >  1:794980/1‑93 (MQ=255)
             cGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTAc                                                                            <  2:6922789/93‑1 (MQ=255)
              ggTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACg                                                                           >  2:9180497/1‑93 (MQ=255)
               gTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGGTCGGCAATAGCATCAGTCAGCTTAATACGTCCCGACGCACCAGGCGGAGGACGt                                                                          >  1:2401664/1‑93 (MQ=255)
               gTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGt                                                                          >  2:6042097/1‑93 (MQ=255)
               gTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGt                                                                          >  1:4794792/1‑93 (MQ=255)
               gTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGt                                                                          >  1:4650499/1‑93 (MQ=255)
                tcatcaGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTTCCCACGCACCAGGCTGAGTACGtt                                                                         >  2:3845720/1‑93 (MQ=255)
                tcatcaGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGtt                                                                         >  1:5958948/1‑93 (MQ=255)
                  atcaGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTcc                                                                       <  2:3417913/93‑1 (MQ=255)
                   tcaGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCa                                                                      >  2:5937112/1‑93 (MQ=255)
                   tcaGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCa                                                                      <  1:7485900/93‑1 (MQ=255)
                      gcgttGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGtt                                                                   >  1:10038373/4‑93 (MQ=255)
                         ttGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCg                                                                <  2:9672311/93‑1 (MQ=255)
                           gCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGc                                                              >  2:9336345/1‑93 (MQ=255)
                           gCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCACCACGCAACAGGCTGAGTACGTTCCAGTTCCCGc                                                              >  1:6131320/1‑93 (MQ=255)
                              tCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCaa                                                           <  1:4314112/93‑1 (MQ=255)
                              tCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCaa                                                           >  1:6099975/1‑93 (MQ=255)
                               cAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCaaa                                                          <  2:1838605/93‑1 (MQ=255)
                                aaCGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCCAat                                                         >  1:4932894/1‑93 (MQ=255)
                                aaCGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAat                                                         >  2:6272863/1‑93 (MQ=255)
                                aaCGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAat                                                         >  1:7090785/1‑93 (MQ=255)
                                aaCGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAat                                                         >  2:6656238/1‑93 (MQ=255)
                                   ggATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATc                                                      >  1:3063384/1‑93 (MQ=255)
                                   ggATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATc                                                      <  2:9586241/93‑1 (MQ=255)
                                   ggATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATc                                                      <  1:3487255/93‑1 (MQ=255)
                                   ggATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGGCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATc                                                      >  1:1813054/1‑93 (MQ=255)
                                   ggATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGCCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATc                                                      >  2:8391030/1‑93 (MQ=255)
                                    gATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCg                                                     >  1:9045455/1‑93 (MQ=255)
                                    gATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCg                                                     <  1:166193/93‑1 (MQ=255)
                                    gATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCg                                                     <  1:2725587/93‑1 (MQ=255)
                                     aTTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCgg                                                    <  1:1524455/93‑1 (MQ=255)
                                     aTTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCgg                                                    >  2:4868031/1‑93 (MQ=255)
                                     aTTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCgg                                                    <  2:8537843/93‑1 (MQ=255)
                                        gTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAg                                                 <  1:4232762/93‑1 (MQ=255)
                                         ttttttCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGa                                                >  1:8291989/1‑93 (MQ=255)
                                           ttttCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGaaa                                              <  1:2872609/93‑1 (MQ=255)
                                            tttCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAg                                             >  1:2642206/1‑93 (MQ=255)
                                               cGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGcac                                          <  2:2499087/93‑1 (MQ=255)
                                               cGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGcac                                          <  2:5150095/93‑1 (MQ=255)
                                                gCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGcaca                                         <  2:2187880/93‑1 (MQ=255)
                                                 ccAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACAt                                        <  2:4455052/93‑1 (MQ=255)
                                                    gCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGc                                     <  1:6323372/93‑1 (MQ=255)
                                                    gCTCGGCAATAGCAGCAGTCAGCGGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGc                                     <  1:6636564/93‑1 (MQ=255)
                                                     cTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCg                                    <  1:6395991/93‑1 (MQ=255)
                                                     cTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCg                                    >  1:8072081/1‑93 (MQ=255)
                                                      taggCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGa                                   >  2:8091730/3‑93 (MQ=255)
                                                      tCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGa                                   >  1:630971/1‑93 (MQ=255)
                                                      tCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGa                                   >  1:9416568/1‑93 (MQ=255)
                                                       cGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGAc                                  <  1:2604097/93‑1 (MQ=255)
                                                        cgCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGAcc                                 <  1:2945352/92‑1 (MQ=255)
                                                         gCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCt                                >  2:7319442/1‑93 (MQ=255)
                                                         gCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCt                                >  2:7615105/1‑93 (MQ=255)
                                                           aaTAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTAc                              >  1:5817675/1‑93 (MQ=255)
                                                            aTAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCCAATATCGGCAGAAAGCACATAGCGACCTaag                             >  1:5703440/1‑91 (MQ=255)
                                                            aTAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACg                             >  2:7894329/1‑93 (MQ=255)
                                                             tAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACgg                            >  2:9085263/1‑93 (MQ=255)
                                                              aGCATCAGTCAGCTGACTACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGc                           <  1:3659850/93‑1 (MQ=255)
                                                              aGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGc                           >  2:1569178/1‑93 (MQ=255)
                                                                 aTCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCat                        >  1:1134103/1‑93 (MQ=255)
                                                                 aTCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCat                        <  1:3877137/93‑1 (MQ=255)
                                                                  tcagtcagCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCatg                       <  1:6493469/93‑1 (MQ=255)
                                                                  tcagtcagCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCatg                       >  1:4973605/1‑93 (MQ=255)
                                                                  tcagtcagCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGCCCata                       >  1:1367153/1‑92 (MQ=255)
                                                                  tcagtcagCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCCACGGCCatg                       >  2:4193304/1‑93 (MQ=255)
                                                                   cagtcagCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCatga                      <  1:9583153/93‑1 (MQ=255)
                                                                       cagCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTc                  >  2:1249965/1‑93 (MQ=255)
                                                                       cagCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTc                  <  2:879549/93‑1 (MQ=255)
                                                                       cagCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTc                  >  1:4425454/1‑93 (MQ=255)
                                                                        agCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCt                 <  1:8578843/93‑1 (MQ=255)
                                                                        agCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCt                 <  2:7950845/93‑1 (MQ=255)
                                                                         gCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTg                >  1:9876749/1‑93 (MQ=255)
                                                                          cTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGa               <  2:2571385/93‑1 (MQ=255)
                                                                            gAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGt             >  2:5067714/1‑93 (MQ=255)
                                                                             aaTACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTc            <  2:7141438/93‑1 (MQ=255)
                                                                             aaTACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTc            >  1:5362354/1‑93 (MQ=255)
                                                                             aaTACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTc            >  2:4064112/1‑93 (MQ=255)
                                                                             aaTACGTCCCCACGCACCAGGCTGAGGACGTTCCAGTTCCGGCCAGATATCGGCAGAAAGGACATAGCGACCTACGGCCATGATGTCTGAGTc            >  2:462618/1‑93 (MQ=255)
                                                                                aCGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAg         <  1:1999793/93‑1 (MQ=255)
                                                                                  gTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCg       >  1:8181077/1‑93 (MQ=255)
                                                                                  gTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGAGACCTACGGCCATGATGTCTGAGTCCAGCg       >  1:1276425/1‑93 (MQ=255)
                                                                                   tCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGt      >  1:727361/1‑93 (MQ=255)
                                                                                   tCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGt      >  2:1787154/1‑93 (MQ=255)
                                                                                    ccccACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTc     <  2:3739444/93‑1 (MQ=255)
                                                                                     cccACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCt    <  2:5752519/93‑1 (MQ=255)
                                                                                       cATGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGc  >  1:7751159/1‑93 (MQ=255)
                                                                                         |                                                                                          
TCGTAACTGTCGCCGGTCATCAGCATTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCATGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGC  >  NC_000913/2111565‑2111744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCAGTCGTAACTGTCGCCGGTCATCAGCATTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCATGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGCGGC  >  NC_000913/2111561‑2111747
                                                                                             |                                                                                             
GCAGTCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCAC                                                                                               <  SRR4302540.6309635/94‑1 (MQ=60)
   GTCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCA                                                                                            >  SRR4302540.8348682/1‑94 (MQ=60)
   GTCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCA                                                                                            >  SRR4302540.9342662/1‑94 (MQ=60)
   GTCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCA                                                                                            >  SRR4302540.5385301/1‑94 (MQ=60)
   GTCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCA                                                                                            >  SRR4302540.5764269/1‑94 (MQ=60)
   GTCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCA                                                                                            >  SRR4302540.5764272/1‑94 (MQ=60)
   GTCGTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCA                                                                                            >  SRR4302540.8042627/1‑94 (MQ=60)
      GTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCA                                                                                         >  SRR4302540.258470/1‑94 (MQ=60)
      GTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCA                                                                                         <  SRR4302540.1955232/94‑1 (MQ=60)
      GTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCA                                                                                         >  SRR4302540.258471/1‑94 (MQ=60)
      GTAACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCA                                                                                         >  SRR4302540.6494074/1‑94 (MQ=60)
        AACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGG                                                                                       >  SRR4302540.4409238/1‑94 (MQ=60)
         ACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCCGGC                                                                                      >  SRR4302540.2914744/1‑94 (MQ=60)
         ACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGC                                                                                      >  SRR4302540.6744922/1‑94 (MQ=60)
         ACTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGC                                                                                      >  SRR4302540.3291395/1‑94 (MQ=60)
          CTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCT                                                                                     <  SRR4302540.675308/94‑1 (MQ=60)
          CTGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCT                                                                                     <  SRR4302540.10155734/94‑1 (MQ=60)
           TGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCGGCTGAATACGTCCCCACGCCCCAGCCTG                                                                                    >  SRR4302540.2672170/1‑94 (MQ=60)
           TGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTG                                                                                    <  SRR4302540.6099672/94‑1 (MQ=60)
           TGTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTG                                                                                    <  SRR4302540.2613792/94‑1 (MQ=60)
            GTCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTTCCCACGCACCAGGCTGA                                                                                   >  SRR4302540.8926526/1‑94 (MQ=60)
             TCGCCGGTCCTCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAG                                                                                  <  SRR4302540.1550600/94‑1 (MQ=60)
             TCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAG                                                                                  <  SRR4302540.6380604/94‑1 (MQ=60)
             TCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAG                                                                                  <  SRR4302540.6415922/94‑1 (MQ=60)
             TCGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAG                                                                                  >  SRR4302540.5071305/1‑94 (MQ=60)
              CGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGT                                                                                 >  SRR4302540.1621426/1‑94 (MQ=60)
              CGCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGT                                                                                 <  SRR4302540.5681922/94‑1 (MQ=60)
               GCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTA                                                                                >  SRR4302540.803424/1‑94 (MQ=60)
               GCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTA                                                                                >  SRR4302540.5813267/1‑94 (MQ=60)
               GCCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTA                                                                                <  SRR4302540.6664809/94‑1 (MQ=60)
                CCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTAC                                                                               <  SRR4302540.10014101/94‑1 (MQ=60)
                CCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTAC                                                                               <  SRR4302540.6174678/94‑1 (MQ=60)
                CCGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTAC                                                                               <  SRR4302540.1216908/94‑1 (MQ=60)
                 CGGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACG                                                                              <  SRR4302540.7230097/94‑1 (MQ=60)
                  GGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGGTCGGCAATAGCATCAGTCAGCTTAATACGTCCCGACGCACCAGGCGGAGGACGT                                                                             >  SRR4302540.2427562/1‑94 (MQ=60)
                  GGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGT                                                                             >  SRR4302540.4846083/1‑94 (MQ=60)
                  GGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGT                                                                             >  SRR4302540.9322194/1‑94 (MQ=60)
                  GGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGT                                                                             >  SRR4302540.4700273/1‑94 (MQ=60)
                  GGTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGT                                                                             >  SRR4302540.1361694/1‑94 (MQ=60)
                   GTCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTT                                                                            >  SRR4302540.6024856/1‑94 (MQ=60)
                    TCATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTC                                                                           <  SRR4302540.426170/94‑1 (MQ=60)
                     CATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCC                                                                          >  SRR4302540.3153976/1‑94 (MQ=60)
                     CATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCC                                                                          <  SRR4302540.2964394/94‑1 (MQ=60)
                     CATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCC                                                                          >  SRR4302540.1220572/1‑94 (MQ=60)
                      ATCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCA                                                                         >  SRR4302540.4792430/1‑94 (MQ=60)
                       TCAGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAG                                                                        <  SRR4302540.7569461/94‑1 (MQ=60)
                         AGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTT                                                                      <  SRR4302540.1507875/94‑1 (MQ=60)
                         AGCGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTT                                                                      >  SRR4302540.10155100/1‑94 (MQ=60)
                           CGTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCC                                                                    >  SRR4302540.4401855/1‑94 (MQ=60)
                            GTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCG                                                                   <  SRR4302540.9688654/94‑1 (MQ=60)
                            GTTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGGACGTTCCAGTTCCG                                                                   >  SRR4302540.6521813/1‑94 (MQ=60)
                             TTTCATCAACGGATTGTTTCTTCGTCAGCTCGGCAATAGCATCAGTCAGCTTAATACGTCCCCACGCACCATGCTGAGTACGctccaactccgc                                                                  >  SRR4302540.4355157/1‑82 (MQ=60)
                             TTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGCGTACGTTCCAGTTCCGG                                                                  >  SRR4302540.4355158/1‑94 (MQ=60)
                             TTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGG                                                                  <  SRR4302540.6015731/94‑1 (MQ=60)
                              TGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCCCCAGGCTGAGTACGTTCCAGTTCCGGC                                                                 >  SRR4302540.2644060/1‑94 (MQ=60)
                              TGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCACCACGCAACAGGCTGAGTACGTTCCAGTTCCCGC                                                                 >  SRR4302540.6199612/1‑94 (MQ=60)
                               GCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCCGCC                                                                >  SRR4302540.4779402/1‑94 (MQ=60)
                               GCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGCACGTTCCAGTTCCGGCC                                                                >  SRR4302540.3373068/1‑94 (MQ=60)
                                 ATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAA                                                              >  SRR4302540.7529257/1‑94 (MQ=60)
                                 ATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAA                                                              >  SRR4302540.6167882/1‑94 (MQ=60)
                                  TCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAA                                                             <  SRR4302540.4361083/94‑1 (MQ=60)
                                   CAACGTATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAAT                                                            <  SRR4302540.8148910/94‑1 (MQ=60)
                                   CAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCCAAT                                                            >  SRR4302540.4986093/1‑94 (MQ=60)
                                   CAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAAT                                                            >  SRR4302540.7169692/1‑94 (MQ=60)
                                   CAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAAT                                                            >  SRR4302540.9681633/1‑94 (MQ=60)
                                      CGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATC                                                         >  SRR4302540.3096993/1‑94 (MQ=60)
                                      CGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATC                                                         >  SRR4302540.1492699/1‑94 (MQ=60)
                                      CGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATC                                                         >  SRR4302540.7931707/1‑94 (MQ=60)
                                      CGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGGCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATC                                                         >  SRR4302540.1832844/1‑94 (MQ=60)
                                       GGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCG                                                        <  SRR4302540.3525227/94‑1 (MQ=60)
                                       GGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCG                                                        >  SRR4302540.9154033/1‑94 (MQ=60)
                                       GGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCG                                                        >  SRR4302540.6272303/1‑94 (MQ=60)
                                       GGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCG                                                        <  SRR4302540.3678017/94‑1 (MQ=60)
                                        GATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGG                                                       <  SRR4302540.2754982/94‑1 (MQ=60)
                                        GATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGG                                                       <  SRR4302540.167856/94‑1 (MQ=60)
                                        GATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGG                                                       >  SRR4302540.9900363/1‑94 (MQ=60)
                                        GATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGG                                                       >  SRR4302540.1813437/1‑94 (MQ=60)
                                         ATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGC                                                      <  SRR4302540.1541334/94‑1 (MQ=60)
                                          TTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCA                                                     >  SRR4302540.9717773/1‑94 (MQ=60)
                                          TTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCA                                                     >  SRR4302540.2441171/1‑94 (MQ=60)
                                           TGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCTGGCCAAATATCGGCAG                                                    <  SRR4302540.6288611/94‑1 (MQ=60)
                                           TGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAG                                                    <  SRR4302540.9483027/94‑1 (MQ=60)
                                           TGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAG                                                    <  SRR4302540.6288609/94‑1 (MQ=60)
                                            GTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGA                                                   >  SRR4302540.8388283/1‑94 (MQ=60)
                                            GTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGA                                                   >  SRR4302540.2999145/1‑94 (MQ=60)
                                            GTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGA                                                   <  SRR4302540.4278831/94‑1 (MQ=60)
                                            GTGTTTTGGCCAGCTCGGCAATAGTATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGA                                                   <  SRR4302540.4278832/94‑1 (MQ=60)
                                             TTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAA                                                  <  SRR4302540.8896132/94‑1 (MQ=60)
                                               TTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAG                                                >  SRR4302540.2617999/1‑94 (MQ=60)
                                               TTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAG                                                >  SRR4302540.2670859/1‑94 (MQ=60)
                                               TTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAG                                                >  SRR4302540.2670860/1‑94 (MQ=60)
                                               TTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAG                                                <  SRR4302540.2903829/94‑1 (MQ=60)
                                                TTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCGCCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGC                                               <  SRR4302540.9251420/94‑1 (MQ=60)
                                                TTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGC                                               <  SRR4302540.2733633/94‑1 (MQ=60)
                                                   CGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACA                                            <  SRR4302540.8359328/94‑1 (MQ=60)
                                                   CGCCAGCTCAGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACA                                            <  SRR4302540.3147416/94‑1 (MQ=60)
                                                    GCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACAT                                           <  SRR4302540.7410401/94‑1 (MQ=60)
                                                    GCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACAT                                           <  SRR4302540.4268132/94‑1 (MQ=60)
                                                    GCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACAT                                           <  SRR4302540.8765345/94‑1 (MQ=60)
                                                    GCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACAT                                           <  SRR4302540.7781627/94‑1 (MQ=60)
                                                    GCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACAT                                           <  SRR4302540.1069149/94‑1 (MQ=60)
                                                    GCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACAT                                           <  SRR4302540.4938863/94‑1 (MQ=60)
                                                    CCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACAT                                           <  SRR4302540.7781628/94‑1 (MQ=60)
                                                     CCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATA                                          <  SRR4302540.8446069/94‑1 (MQ=60)
                                                      CAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAG                                         >  SRR4302540.7093049/1‑94 (MQ=60)
                                                       AGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGC                                        <  SRR4302540.4735345/94‑1 (MQ=60)
                                                        GCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCG                                       >  SRR4302540.7883733/1‑94 (MQ=60)
                                                        GCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCG                                       >  SRR4302540.8165739/1‑94 (MQ=60)
                                                        GCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCG                                       <  SRR4302540.6393792/94‑1 (MQ=60)
                                                        GCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCG                                       <  SRR4302540.6393791/94‑1 (MQ=60)
                                                        GCTCGGCAATAGCAGCAGTCAGCGGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCG                                       <  SRR4302540.6710007/94‑1 (MQ=60)
                                                        ACTCGGCAATAACCTCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCG                                       <  SRR4302540.3627939/94‑1 (MQ=60)
                                                         CTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGA                                      <  SRR4302540.3058000/94‑1 (MQ=60)
                                                         CTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGA                                      >  SRR4302540.637679/1‑94 (MQ=60)
                                                         CTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGA                                      >  SRR4302540.9528506/1‑94 (MQ=60)
                                                         CTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGA                                      <  SRR4302540.6467188/94‑1 (MQ=60)
                                                          TCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGAC                                     <  SRR4302540.2630432/94‑1 (MQ=60)
                                                          TCGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGAC                                     <  SRR4302540.5591946/94‑1 (MQ=60)
                                                           CGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACC                                    <  SRR4302540.2632191/94‑1 (MQ=60)
                                                           CGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACC                                    <  SRR4302540.8930881/94‑1 (MQ=60)
                                                           CGGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACC                                    <  SRR4302540.3309284/94‑1 (MQ=60)
                                                            GGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCT                                   <  SRR4302540.4518746/94‑1 (MQ=60)
                                                            CGCAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCT                                   <  SRR4302540.2977742/94‑1 (MQ=60)
                                                              CAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTAC                                 >  SRR4302540.1917443/1‑94 (MQ=60)
                                                              CAATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTAC                                 >  SRR4302540.5881985/1‑94 (MQ=60)
                                                               AATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCCAATATCGGCAGAAAGCACATAGCGACCTAAG                                >  SRR4302540.5766238/1‑94 (MQ=60)
                                                               AATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACG                                >  SRR4302540.5766239/1‑94 (MQ=60)
                                                                ATAGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGG                               >  SRR4302540.9461316/1‑94 (MQ=60)
                                                                  AGCATCAGTCAGCTGACTACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCC                             <  SRR4302540.3699917/94‑1 (MQ=60)
                                                                  AGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCC                             >  SRR4302540.160093/1‑94 (MQ=60)
                                                                  AGCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCC                             >  SRR4302540.3914403/1‑94 (MQ=60)
                                                                   GCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCA                            >  SRR4302540.3006268/1‑94 (MQ=60)
                                                                   GCATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGGTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACCGCCA                            >  SRR4302540.9918055/1‑94 (MQ=60)
                                                                    CATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTGCGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCAT                           <  SRR4302540.7235149/94‑1 (MQ=60)
                                                                    CATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCAT                           >  SRR4302540.1145924/1‑94 (MQ=60)
                                                                     ATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACCTAGCGACCTccgccgatg                          >  SRR4302540.1729710/1‑85 (MQ=60)
                                                                     ATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATG                          <  SRR4302540.3919274/94‑1 (MQ=60)
                                                                     ATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATG                          >  SRR4302540.5027427/1‑94 (MQ=60)
                                                                     ATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATG                          <  SRR4302540.8197758/94‑1 (MQ=60)
                                                                     ATCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGCCCATA                          >  SRR4302540.1381628/1‑94 (MQ=60)
                                                                      TCAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGA                         <  SRR4302540.6565682/94‑1 (MQ=60)
                                                                       CAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGAT                        <  SRR4302540.8256431/94‑1 (MQ=60)
                                                                       CAGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGAT                        <  SRR4302540.9696304/94‑1 (MQ=60)
                                                                        AGTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATG                       >  SRR4302540.4642524/1‑94 (MQ=60)
                                                                         GTCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGT                      <  SRR4302540.6090437/94‑1 (MQ=60)
                                                                          TCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTC                     >  SRR4302540.4473400/1‑94 (MQ=60)
                                                                          TCAGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTC                     <  SRR4302540.5006981/94‑1 (MQ=60)
                                                                            AGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTG                   <  SRR4302540.8678561/94‑1 (MQ=60)
                                                                            AGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTG                   <  SRR4302540.10013980/94‑1 (MQ=60)
                                                                            AGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTG                   >  SRR4302540.9992099/1‑94 (MQ=60)
                                                                            AGCTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGAACATAGCGACCTACGGCCATGATGTCTG                   >  SRR4302540.2383850/1‑94 (MQ=60)
                                                                              CTGAATACGTCCCCGCGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGGCCTACGGCCATGATGTCTGAG                 <  SRR4302540.8414501/94‑1 (MQ=60)
                                                                              CTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAG                 <  SRR4302540.5763381/94‑1 (MQ=60)
                                                                              CTGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAG                 <  SRR4302540.643882/94‑1 (MQ=60)
                                                                               TGAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGT                >  SRR4302540.6199043/1‑94 (MQ=60)
                                                                                GAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTC               >  SRR4302540.5421255/1‑94 (MQ=60)
                                                                                GAATACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTC               >  SRR4302540.5005806/1‑94 (MQ=60)
                                                                                   TACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAG            >  SRR4302540.5894661/1‑94 (MQ=60)
                                                                                    ACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGC           <  SRR4302540.2021450/94‑1 (MQ=60)
                                                                                    ACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGC           <  SRR4302540.6597200/94‑1 (MQ=60)
                                                                                    ACGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGC           <  SRR4302540.8861859/94‑1 (MQ=60)
                                                                                     CGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCG          >  SRR4302540.8276103/1‑94 (MQ=60)
                                                                                     CGTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGAGACCTACGGCCATGATGTCTGAGTCCAGCG          >  SRR4302540.1289584/1‑94 (MQ=60)
                                                                                      GTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGT         >  SRR4302540.735155/1‑94 (MQ=60)
                                                                                      GTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGT         >  SRR4302540.2831239/1‑94 (MQ=60)
                                                                                      GTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGT         <  SRR4302540.4980938/94‑1 (MQ=60)
                                                                                      GTCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGT         <  SRR4302540.2847231/94‑1 (MQ=60)
                                                                                       TCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTC        >  SRR4302540.542179/1‑94 (MQ=60)
                                                                                       TCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGCCCAGCGTC        <  SRR4302540.137887/94‑1 (MQ=60)
                                                                                       GCCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTC        <  SRR4302540.2299742/94‑1 (MQ=60)
                                                                                        CCCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCT       <  SRR4302540.3710666/94‑1 (MQ=60)
                                                                                         CCCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTTAGTCCAGCGTCTG      <  SRR4302540.407447/94‑1 (MQ=60)
                                                                                          CCATGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGC     >  SRR4302540.7841686/1‑94 (MQ=60)
                                                                                          CCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGC     >  SRR4302540.8431948/1‑94 (MQ=60)
                                                                                          CCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGC     >  SRR4302540.4697762/1‑94 (MQ=60)
                                                                                          CCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGC     <  SRR4302540.9146483/94‑1 (MQ=60)
                                                                                          CCACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGC     <  SRR4302540.7890096/94‑1 (MQ=60)
                                                                                           CACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGCG    >  SRR4302540.8978904/1‑94 (MQ=60)
                                                                                           CACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGCG    <  SRR4302540.5637589/94‑1 (MQ=60)
                                                                                           CACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGCG    >  SRR4302540.8470953/1‑94 (MQ=60)
                                                                                            ACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGCGG   >  SRR4302540.9398522/1‑94 (MQ=60)
                                                                                            ACGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGAGGTCTGAGTCCAGCGGCTGCGG   >  SRR4302540.9997799/1‑94 (MQ=60)
                                                                                             CGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAACTATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGCGGC  >  SRR4302540.1367447/1‑94 (MQ=60)
                                                                                             CGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGCGGC  >  SRR4302540.1367448/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCAGTCGTAACTGTCGCCGGTCATCAGCATTGCATCAACGGATTGTTTTTTCGCCAGCTCGGCAATAGCATCAGTCAGCTGAATACGTCCCCATGCACCAGGCTGAGTACGTTCCAGTTCCGGCCAAATATCGGCAGAAAGCACATAGCGACCTACGGCCATGATGTCTGAGTCCAGCGTCTGCGGC  >  NC_000913/2111561‑2111747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑