Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,185,017	Δ1 bp	coding (38/339 nt)	b2107 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,185,014	0	T	.	99.7%	1433.6 / ‑4.2	318	coding (35/339 nt)	b2107	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); major base . (147/169); minor base G (1/0); total (148/170)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 355 total aligned reads displayed.

TATTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGT  >  NC_000913/2184922‑2185102

 atTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtt                                                                                         >  1:9810334/1‑93 (MQ=255)

 atTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtt                                                                                         <  1:6669363/93‑1 (MQ=255)

 atTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtt                                                                                         <  1:4023046/93‑1 (MQ=255)

  ttGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCttt                                                                                        <  1:9165046/93‑1 (MQ=255)

   tGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttg                                                                                       >  2:88439/1‑92 (MQ=255)

   tGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttg                                                                                       <  1:9703381/93‑2 (MQ=255)

      aTGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttgctg                                                                                    <  1:253964/93‑5 (MQ=255)

       tGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTgg                                                                                  <  2:525230/93‑1 (MQ=255)

       tGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTgg                                                                                  >  1:4632362/1‑93 (MQ=255)

          gaGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTa                                                                               <  2:6928702/92‑1 (MQ=255)

           aGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAc                                                                              >  2:6251749/1‑93 (MQ=255)

            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             >  2:1384498/1‑93 (MQ=255)

            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             >  2:2312280/1‑93 (MQ=255)

            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             <  1:4177771/93‑1 (MQ=255)

            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             >  1:3422476/1‑93 (MQ=255)

              aaaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAg                                                                           <  2:482457/93‑1 (MQ=255)

              aaaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAg                                                                           <  1:6882661/93‑1 (MQ=255)

              aaaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAg                                                                           <  1:8862874/93‑1 (MQ=255)

               aaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGt                                                                          <  2:6800923/93‑1 (MQ=255)

                 gATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAACTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgc                                                                        >  2:7630565/1‑93 (MQ=255)

                 gATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgc                                                                        >  1:7789534/1‑93 (MQ=255)

                 gATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGATGCGC‑TTTGCTGGTTACCAGTgc                                                                        >  1:4563555/1‑93 (MQ=255)

                     tGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgccgcc                                                                    >  1:3281133/1‑93 (MQ=255)

                      gCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCt                                                                   <  2:8453969/93‑1 (MQ=255)

                       cGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTg                                                                  <  2:6088542/93‑1 (MQ=255)

                       cGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTg                                                                  <  1:8174629/93‑1 (MQ=255)

                        gACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTgg                                                                 <  1:2144894/93‑1 (MQ=255)

                        gACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTgg                                                                 <  2:1112720/93‑1 (MQ=255)

                         aCTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTggg                                                                >  1:2900507/1‑93 (MQ=255)

                          cTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGc                                                               >  1:1734760/1‑93 (MQ=255)

                          cTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGc                                                               <  2:3867508/93‑1 (MQ=255)

                           tGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGcc                                                              <  1:4908587/93‑1 (MQ=255)

                           tGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGcc                                                              <  2:4383853/93‑1 (MQ=255)

                              tatTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCa                                                           <  1:2922365/93‑1 (MQ=255)

                                ttACAGATCCCCGAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAcc                                                         >  1:7524333/1‑93 (MQ=255)

                                ttACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAcc                                                         >  1:5998393/1‑93 (MQ=255)

                                  aCAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAg                                                       >  2:1947618/1‑93 (MQ=255)

                                   cAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGc                                                      >  2:8594050/1‑93 (MQ=255)

                                     gATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCa                                                    <  2:2457467/93‑1 (MQ=255)

                                     gATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCa                                                    <  2:9369512/93‑1 (MQ=255)

                                      aTCCCCAAAGGGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACAAGCCAc                                                   >  2:3561554/1‑93 (MQ=255)

                                       tCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCAcc                                                  <  1:8236474/93‑1 (MQ=255)

                                       tCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCAcc                                                  >  2:2815054/1‑93 (MQ=255)

                                        ccccAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACcg                                                 >  2:7820465/1‑93 (MQ=255)

                                           cAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCgg                                              >  1:271821/1‑93 (MQ=255)

                                           cAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCgg                                              <  2:3195489/93‑1 (MQ=255)

                                           cAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCgg                                              >  2:297166/1‑93 (MQ=255)

                                            aaaGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCggg                                             <  1:5557208/93‑1 (MQ=255)

                                             aaGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGt                                            <  2:506417/93‑1 (MQ=255)

                                               gTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTc                                          <  1:8377014/93‑1 (MQ=255)

                                                 ggAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCG‑GTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGa                                        >  1:9499531/1‑93 (MQ=255)

                                                  gagaGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGAc                                       >  2:958359/1‑93 (MQ=255)

                                                    gagTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCa                                     <  1:1185965/93‑1 (MQ=255)

                                                     agTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCaa                                    >  1:9327909/1‑93 (MQ=255)

                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   <  1:1073930/93‑1 (MQ=255)

                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   <  1:8994855/93‑1 (MQ=255)

                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   <  2:4536491/93‑1 (MQ=255)

                                                       tttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTTCCGCCTGGGCCGCACCAGCCATCGCGGGTTCGACCAATa                                  >  2:4036356/1‑93 (MQ=255)

                                                       tttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAtc                                  >  1:8053888/1‑92 (MQ=255)

                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAcc                                <  1:9775295/93‑1 (MQ=255)

                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAcc                                <  1:5425723/93‑1 (MQ=255)

                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAcc                                <  2:426274/93‑1 (MQ=255)

                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCA‑CAGCCACCGCGGGGTCGACCAATAccc                               >  2:2101925/1‑92 (MQ=255)

                                                            gACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCg                             >  2:7475017/1‑93 (MQ=255)

                                                            gACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGATCGACCAATACCTCg                             >  1:4248676/1‑93 (MQ=255)

                                                              ccATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCggg                           >  2:1023511/1‑93 (MQ=255)

                                                               cATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGa                          >  2:6553358/1‑93 (MQ=255)

                                                                aTTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGaa                         <  1:3020323/93‑1 (MQ=255)

                                                                 ttAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAt                        >  1:1806286/1‑93 (MQ=255)

                                                                  tAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAtt                       <  1:1530769/93‑1 (MQ=255)

                                                                   aaaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAttt                      <  1:199307/93‑1 (MQ=255)

                                                                   aaaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAttt                      <  2:5345272/93‑1 (MQ=255)

                                                                    aaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTc                     <  1:1398193/93‑1 (MQ=255)

                                                                      aaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTa                   >  2:5728080/1‑93 (MQ=255)

                                                                       aTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTaa                  <  1:2188122/93‑1 (MQ=255)

                                                                        tAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAg                 >  2:3623518/1‑93 (MQ=255)

                                                                        tAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGGTCGACCAATACCTCGGGAATTTCTAAg                 >  1:7198358/1‑93 (MQ=255)

                                                                          aGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTa               >  2:2349677/1‑93 (MQ=255)

                                                                          aGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTa               <  2:9309/93‑1 (MQ=255)

                                                                          aGATGTAGCGGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATCCCTCGGGAATTTCTAAGTa               <  1:6502338/93‑1 (MQ=255)

                                                                           gATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAt              <  1:5853130/93‑1 (MQ=255)

                                                                           gATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAt              <  1:8954886/93‑1 (MQ=255)

                                                                           gATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCAACCAATACCTCGGGAATTTCTAAGTAt              >  2:6655547/1‑93 (MQ=255)

                                                                            aTGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATg             >  1:3673533/1‑93 (MQ=255)

                                                                            aTGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATg             >  2:9018433/1‑93 (MQ=255)

                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            <  1:2331011/93‑1 (MQ=255)

                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            <  1:7720385/93‑1 (MQ=255)

                                                                              gTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAg           >  2:7315091/1‑93 (MQ=255)

                                                                              gTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAg           >  2:5566848/1‑93 (MQ=255)

                                                                               ttGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGt          <  1:7390279/93‑1 (MQ=255)

                                                                               ttGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGt          >  2:4870172/1‑93 (MQ=255)

                                                                                tGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTGAGTATGAGtt         >  2:4481829/1‑93 (MQ=255)

                                                                                tGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGtt         <  1:8780325/93‑1 (MQ=255)

                                                                                 gCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTa        <  2:7966526/93‑1 (MQ=255)

                                                                                   tGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAag      <  2:3507676/93‑1 (MQ=255)

                                                                                   tGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAag      <  2:8193970/93‑1 (MQ=255)

                                                                                    gggTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagc     <  2:5022037/93‑2 (MQ=255)

                                                                                     ggTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagca    <  2:581184/93‑3 (MQ=255)

                                                                                      gTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagcag   >  2:7191224/1‑93 (MQ=255)

                                                                                       tGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagcagt  <  2:1713711/93‑1 (MQ=255)

TATTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGT  >  NC_000913/2184922‑2185102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGTTTCATTG  >  NC_000913/2184924‑2185109

TTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTG                                                                                              <  SRR4302540.9275017/94‑1 (MQ=60)

  GTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCT                                                                                           <  SRR4302540.4087784/94‑1 (MQ=60)

   TATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTG                                                                                          <  SRR4302540.5433750/94‑1 (MQ=60)

   TATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTG                                                                                          >  SRR4302540.263784/1‑94 (MQ=60)

   TATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTG                                                                                          <  SRR4302540.7361412/94‑1 (MQ=60)

   TATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTG                                                                                          >  SRR4302540.1422391/1‑94 (MQ=60)

    ATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGGGC‑TTTGCTGG                                                                                         >  SRR4302540.3162045/1‑94 (MQ=60)

    ATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGG                                                                                         >  SRR4302540.4681973/1‑94 (MQ=60)

    ATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGG                                                                                         <  SRR4302540.256418/94‑1 (MQ=60)

    ATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGG                                                                                         <  SRR4302540.9919462/94‑1 (MQ=60)

     TGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGT                                                                                        >  SRR4302540.8454435/1‑94 (MQ=60)

      GGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTT                                                                                       >  SRR4302540.405140/1‑94 (MQ=60)

       GCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTA                                                                                      <  SRR4302540.3439816/94‑1 (MQ=60)

        CAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAC                                                                                     >  SRR4302540.258020/1‑94 (MQ=60)

         AGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACC                                                                                    >  SRR4302540.9929180/1‑94 (MQ=60)

         AGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACC                                                                                    <  SRR4302540.748845/94‑1 (MQ=60)

         AGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACC                                                                                    >  SRR4302540.3459689/1‑94 (MQ=60)

          GGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCA                                                                                   <  SRR4302540.4223126/94‑1 (MQ=60)

          GGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCA                                                                                   >  SRR4302540.446464/1‑94 (MQ=60)

           GAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAG                                                                                  <  SRR4302540.8621554/94‑1 (MQ=60)

           GAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAG                                                                                  <  SRR4302540.2758302/94‑1 (MQ=60)

           GAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAG                                                                                  <  SRR4302540.8621553/94‑1 (MQ=60)

           GAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAG                                                                                  <  SRR4302540.5980717/94‑1 (MQ=60)

           GAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAG                                                                                  <  SRR4302540.1631068/94‑1 (MQ=60)

            AAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGT                                                                                 <  SRR4302540.9114560/94‑1 (MQ=60)

            AAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGT                                                                                 <  SRR4302540.6958960/94‑1 (MQ=60)

            AAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGT                                                                                 <  SRR4302540.5808981/94‑1 (MQ=60)

            AAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGT                                                                                 <  SRR4302540.1306023/94‑1 (MQ=60)

            AAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGT                                                                                 >  SRR4302540.8770420/1‑94 (MQ=60)

            AAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGT                                                                                 >  SRR4302540.4232337/1‑94 (MQ=60)

            AAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGT                                                                                 <  SRR4302540.8965436/94‑1 (MQ=60)

              AGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGC                                                                               <  SRR4302540.9181212/94‑1 (MQ=60)

              AGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGC                                                                               >  SRR4302540.4612847/1‑94 (MQ=60)

              AGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGC                                                                               >  SRR4302540.7880587/1‑94 (MQ=60)

              AGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGATGCGC‑TTTGCTGGTTACCAGTGC                                                                               >  SRR4302540.4612846/1‑94 (MQ=60)

               GATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCC                                                                              >  SRR4302540.7451685/1‑94 (MQ=60)

                ATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCG                                                                             >  SRR4302540.9860402/1‑94 (MQ=60)

                  ATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCC                                                                           <  SRR4302540.7875756/94‑1 (MQ=60)

                  ATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCC                                                                           <  SRR4302540.7875755/94‑1 (MQ=60)

                  ATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCC                                                                           >  SRR4302540.3848335/1‑94 (MQ=60)

                  ATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCC                                                                           <  SRR4302540.4578715/94‑1 (MQ=60)

                  ATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCC                                                                           >  SRR4302540.3316983/1‑94 (MQ=60)

                   TGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCT                                                                          <  SRR4302540.8885129/94‑1 (MQ=60)

                     CGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGG                                                                        <  SRR4302540.8269581/94‑1 (MQ=60)

                      GACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGG                                                                       >  SRR4302540.10043062/1‑94 (MQ=60)

                      GACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGG                                                                       >  SRR4302540.2932159/1‑94 (MQ=60)

                      GACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGG                                                                       <  SRR4302540.2167951/94‑1 (MQ=60)

                       ACTGATATTACAGATCCCCAAAGTGGAGATTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGC                                                                      <  SRR4302540.8056525/94‑1 (MQ=60)

                       ACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGC                                                                      >  SRR4302540.1753490/1‑94 (MQ=60)

                        CTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCC                                                                     <  SRR4302540.8077376/94‑1 (MQ=60)

                        CTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCC                                                                     <  SRR4302540.1892882/94‑1 (MQ=60)

                        CTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAACAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCC                                                                     <  SRR4302540.2076807/94‑1 (MQ=60)

                         TGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCG                                                                    <  SRR4302540.4961430/94‑1 (MQ=60)

                         TGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCG                                                                    <  SRR4302540.1778872/94‑1 (MQ=60)

                         TGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCG                                                                    >  SRR4302540.1294779/1‑94 (MQ=60)

                          GATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGC                                                                   >  SRR4302540.3156582/1‑94 (MQ=60)

                           ATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCC                                                                  >  SRR4302540.7107321/1‑94 (MQ=60)

                           ATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCA                                                                  >  SRR4302540.9047548/1‑94 (MQ=60)

                           ATATTACAGATCCCCAAAGTGGAGAGGTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTCGGCCGCA                                                                  >  SRR4302540.9047549/1‑94 (MQ=60)

                            TATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAC                                                                 <  SRR4302540.2954390/94‑1 (MQ=60)

                            TATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAC                                                                 >  SRR4302540.8281886/1‑94 (MQ=60)

                            TATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAC                                                                 <  SRR4302540.2954386/94‑1 (MQ=60)

                            TATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAC                                                                 <  SRR4302540.2192677/94‑1 (MQ=60)

                             ATTACAGATCCCCGAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACC                                                                >  SRR4302540.7608518/1‑94 (MQ=60)

                             ATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACC                                                                >  SRR4302540.6064868/1‑94 (MQ=60)

                             ATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACC                                                                >  SRR4302540.7608517/1‑94 (MQ=60)

                             ATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACC                                                                >  SRR4302540.7651178/1‑94 (MQ=60)

                              TTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCA                                                               <  SRR4302540.9935924/94‑1 (MQ=60)

                              TTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCA                                                               <  SRR4302540.2425861/94‑1 (MQ=60)

                                 CAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCC                                                            >  SRR4302540.3685338/1‑94 (MQ=60)

                                  AGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCA                                                           >  SRR4302540.7654100/1‑94 (MQ=60)

                                  AGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCA                                                           >  SRR4302540.254955/1‑94 (MQ=60)

                                   GATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCAC                                                          >  SRR4302540.84055/1‑94 (MQ=60)

                                   GATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCAC                                                          <  SRR4302540.9745624/94‑1 (MQ=60)

                                     TCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCG                                                        <  SRR4302540.8332205/94‑1 (MQ=60)

                                      CCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGC                                                       <  SRR4302540.5285756/94‑1 (MQ=60)

                                       CCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAATGCCGCCTGGGCCGCACCAGCCACCGCG                                                      <  SRR4302540.9074632/94‑1 (MQ=60)

                                        CCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGG                                                     >  SRR4302540.274496/1‑94 (MQ=60)

                                         CAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGG                                                    <  SRR4302540.8912600/94‑1 (MQ=60)

                                          AAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGT                                                   <  SRR4302540.9604378/94‑1 (MQ=60)

                                          AAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGT                                                   >  SRR4302540.1243495/1‑94 (MQ=60)

                                          AAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGT                                                   <  SRR4302540.5618417/94‑1 (MQ=60)

                                           AAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTT                                                  <  SRR4302540.2622744/94‑1 (MQ=60)

                                           AAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTT                                                  <  SRR4302540.1442206/94‑1 (MQ=60)

                                            AGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTC                                                 <  SRR4302540.6932704/94‑1 (MQ=60)

                                             GTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCG                                                <  SRR4302540.8474220/94‑1 (MQ=60)

                                             GTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCG                                                <  SRR4302540.5717458/94‑1 (MQ=60)

                                              TGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGA                                               <  SRR4302540.1096575/94‑1 (MQ=60)

                                              TGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCG‑GTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGA                                               >  SRR4302540.9612098/1‑94 (MQ=60)

                                               GGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGAC                                              >  SRR4302540.1654845/1‑94 (MQ=60)

                                               GGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGAC                                              <  SRR4302540.559530/94‑1 (MQ=60)

                                                GAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACC                                             <  SRR4302540.4646986/94‑1 (MQ=60)

                                                 AGAGTTTATGACCATTAAAAATAAGATTTTGCTGTGTGCGCGTTT‑CTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCCCGGGTTCGACCA                                            <  SRR4302540.22683/94‑1 (MQ=60)

                                                 AGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCA                                            >  SRR4302540.9563555/1‑94 (MQ=60)

                                                  GAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAA                                           <  SRR4302540.1198201/94‑1 (MQ=60)

                                                  GAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAA                                           <  SRR4302540.2944631/94‑1 (MQ=60)

                                                  GAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAA                                           >  SRR4302540.9439148/1‑94 (MQ=60)

                                                    GTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACGAGCCACCGCGGGTTCGACCAATA                                         >  SRR4302540.9845365/1‑94 (MQ=60)

                                                    GTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATC                                         >  SRR4302540.8147419/1‑94 (MQ=60)

                                                    GTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATA                                         <  SRR4302540.1084895/94‑1 (MQ=60)

                                                    GTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATA                                         <  SRR4302540.9102756/94‑1 (MQ=60)

                                                    GTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATA                                         >  SRR4302540.3560551/1‑94 (MQ=60)

                                                     TTTATGACCATTAAAAATAAGATGTTGCTGGGGGCGC‑TTTGCTGGTTACCAGGGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAC                                        >  SRR4302540.5568182/1‑94 (MQ=60)

                                                      TTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACC                                       <  SRR4302540.1657142/94‑1 (MQ=60)

                                                      TTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACC                                       <  SRR4302540.7503245/94‑1 (MQ=60)

                                                      TTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACC                                       <  SRR4302540.6785380/94‑1 (MQ=60)

                                                       TATGACTATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCTCCAGCCACCGCTTGTTCGACCAATACCT                                      >  SRR4302540.9081562/1‑94 (MQ=60)

                                                       TATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTT‑CTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCT                                      <  SRR4302540.1971885/94‑1 (MQ=60)

                                                       TATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCT                                      <  SRR4302540.9889886/94‑1 (MQ=60)

                                                       TATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCT                                      <  SRR4302540.492037/94‑1 (MQ=60)

                                                       TATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCT                                      <  SRR4302540.5485395/94‑1 (MQ=60)

                                                       TATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCT                                      <  SRR4302540.9889885/94‑1 (MQ=60)

                                                       TATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCT                                      <  SRR4302540.5822351/94‑1 (MQ=60)

                                                         TGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCG                                    >  SRR4302540.1103460/1‑94 (MQ=60)

                                                         TGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGATCGACCAATACCTCG                                    >  SRR4302540.4294899/1‑94 (MQ=60)

                                                           ACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCTCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGG                                  >  SRR4302540.2404150/1‑94 (MQ=60)

                                                             CATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAC                                >  SRR4302540.8354321/1‑94 (MQ=60)

                                                             CATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAA                                <  SRR4302540.218256/94‑1 (MQ=60)

                                                              ATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGGAT                               >  SRR4302540.8309431/1‑94 (MQ=60)

                                                              ATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAT                               <  SRR4302540.3053519/94‑1 (MQ=60)

                                                              ATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAT                               >  SRR4302540.1825965/1‑94 (MQ=60)

                                                              ATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAT                               >  SRR4302540.4216922/1‑94 (MQ=60)

                                                              ATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAT                               >  SRR4302540.1825964/1‑94 (MQ=60)

                                                               TTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATT                              >  SRR4302540.476036/1‑94 (MQ=60)

                                                                TAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTT                             <  SRR4302540.1547721/94‑1 (MQ=60)

                                                                 AAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTC                            <  SRR4302540.201277/94‑1 (MQ=60)

                                                                  AAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCT                           <  SRR4302540.1413209/94‑1 (MQ=60)

                                                                     ATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAG                        <  SRR4302540.2211744/94‑1 (MQ=60)

                                                                     ATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAG                        >  SRR4302540.604296/1‑94 (MQ=60)

                                                                     ATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAG                        >  SRR4302540.3192831/1‑94 (MQ=60)

                                                                     ATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGGTCGACCAATACCTCGGGAATTTCTAAG                        >  SRR4302540.7278601/1‑94 (MQ=60)

                                                                     ATAAGATGTTGCTGGGTACGC‑TTTACTGGTTACCAGTGCCGACTGAGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTGAG                        <  SRR4302540.9023958/94‑1 (MQ=60)

                                                                      TAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGT                       <  SRR4302540.3667496/94‑1 (MQ=60)

                                                                      TAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGT                       >  SRR4302540.712421/1‑94 (MQ=60)

                                                                       AAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTA                      <  SRR4302540.9203603/94‑1 (MQ=60)

                                                                       AAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTA                      >  SRR4302540.7255532/1‑94 (MQ=60)

                                                                        AGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAT                     <  SRR4302540.6574615/94‑1 (MQ=60)

                                                                        AGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAT                     <  SRR4302540.9861892/94‑1 (MQ=60)

                                                                        AGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAT                     <  SRR4302540.6520569/94‑1 (MQ=60)

                                                                        AGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAT                     <  SRR4302540.6732031/94‑1 (MQ=60)

                                                                        AGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCAGCACCAGCCACCGCGGGTTCGACCAATCCCTCGGGAATTTCTAAGTAT                     <  SRR4302540.4272264/94‑1 (MQ=60)

                                                                        AGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGAGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAT                     <  SRR4302540.9784662/94‑1 (MQ=60)

                                                                        AGATGTAGCGGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATCCCTCGGGAATTTCTAAGTAT                     <  SRR4302540.6574619/94‑1 (MQ=60)

                                                                         GATGTTGCTGGGTGCGC‑TTTGCTGGTTTCCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATG                    <  SRR4302540.3043121/94‑1 (MQ=60)

                                                                         GATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATG                    >  SRR4302540.3713704/1‑94 (MQ=60)

                                                                         GATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATG                    <  SRR4302540.9060601/94‑1 (MQ=60)

                                                                         GATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATG                    <  SRR4302540.5917865/94‑1 (MQ=60)

                                                                          ATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGCGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGA                   <  SRR4302540.217181/94‑1 (MQ=60)

                                                                           TGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAG                  <  SRR4302540.7809913/94‑1 (MQ=60)

                                                                           TGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAG                  <  SRR4302540.2356122/94‑1 (MQ=60)

                                                                           TGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAG                  <  SRR4302540.2339069/94‑1 (MQ=60)

                                                                           TGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCCGGTTCGACCAATACCTCGGGAATTTCTAACTATGAT                  >  SRR4302540.340891/1‑94 (MQ=60)

                                                                           TGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCAGGACCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAG                  <  SRR4302540.7809914/94‑1 (MQ=60)

                                                                            GTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGT                 >  SRR4302540.2054946/1‑94 (MQ=60)

                                                                             TTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTT                <  SRR4302540.7472621/94‑1 (MQ=60)

                                                                              TGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTA               <  SRR4302540.8881988/94‑1 (MQ=60)

                                                                                CTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAG             >  SRR4302540.6607786/1‑94 (MQ=60)

                                                                                CTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAG             <  SRR4302540.6750832/94‑1 (MQ=60)

                                                                                CTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAG             <  SRR4302540.9458572/94‑1 (MQ=60)

                                                                                CTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGACACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAG             >  SRR4302540.4278513/1‑94 (MQ=60)

                                                                                  GGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCA           <  SRR4302540.2937253/94‑1 (MQ=60)

                                                                                  GGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCA           <  SRR4302540.5411076/94‑1 (MQ=60)

                                                                                  GGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCA           <  SRR4302540.8223588/94‑1 (MQ=60)

                                                                                   GGTGCGC‑TTTGCTGGGTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAG          <  SRR4302540.1891176/94‑1 (MQ=60)

                                                                                    GTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGT         >  SRR4302540.9431271/1‑94 (MQ=60)

                                                                                     TGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTT        >  SRR4302540.7776100/1‑94 (MQ=60)

                                                                                      ggcgcTTTGCTGGTTACCTGTTCCGCCTGGGCCCCACCAGCCACCGCGGGTTCGACCAATTCCTCGGGAATTTCTAAGTATGAGTTAAGCAGTT        <  SRR4302540.5487231/89‑1 (MQ=60)

                                                                                      GCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTT       <  SRR4302540.6521712/94‑1 (MQ=60)

                                                                                      GCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTT       <  SRR4302540.8804175/94‑1 (MQ=60)

                                                                                      GCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTT       <  SRR4302540.3482169/94‑1 (MQ=60)

                                                                                          CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGCATTTCTAAGAATGAGTTAAGCAGTTTCAT    >  SRR4302540.3537910/1‑94 (MQ=60)

                                                                                          CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCAT    <  SRR4302540.9647611/94‑1 (MQ=60)

                                                                                          CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCAT    >  SRR4302540.3820193/1‑94 (MQ=60)

                                                                                          CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCAT    >  SRR4302540.3537911/1‑94 (MQ=60)

                                                                                          CTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTATAAGTATGAGTTAAGCAGTTTCAT    >  SRR4302540.8677126/1‑94 (MQ=60)

                                                                                            TTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTG  >  SRR4302540.173573/1‑94 (MQ=60)

                                                                                            TTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTG  >  SRR4302540.1963689/1‑94 (MQ=60)

                                                                                            TTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTG  <  SRR4302540.2015830/94‑1 (MQ=60)

                                                                                            TTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTG  <  SRR4302540.213048/94‑1 (MQ=60)

TTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGTTTCATTG  >  NC_000913/2184924‑2185109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`