Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,306,256 |
T→C |
E127G (GAA→GGA) |
yojI ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,306,256 | 0 | T | C | 100.0%
| 794.3
/ NA
| 243 | E127G (GAA→GGA) | yojI | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (146/97); total (146/97) |
Only 100 of 254 total aligned reads displayed.
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCG > NC_000913/2306166‑2306344
|
aTCCAGATACCCGTCACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTccc < 2:3844909/93‑1 (MQ=255)
ccAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCgg < 1:8682429/93‑1 (MQ=255)
aGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCa > 2:2073709/1‑93 (MQ=255)
aGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCa < 2:510140/93‑1 (MQ=255)
gATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAg > 1:5923371/1‑93 (MQ=255)
gATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAg > 1:170287/1‑93 (MQ=255)
gATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAg > 1:7416251/1‑93 (MQ=255)
aTAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGa > 1:1219894/1‑93 (MQ=255)
aTAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGa < 2:2702072/93‑1 (MQ=255)
tAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGAc < 1:2344561/93‑1 (MQ=255)
aGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACg > 2:2157751/1‑93 (MQ=255)
aGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACg > 1:9173152/1‑93 (MQ=255)
gCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGc > 2:7750611/1‑93 (MQ=255)
ccGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGca > 1:324203/1‑93 (MQ=255)
ttcccAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCGCaa < 2:8938200/90‑1 (MQ=255)
ttACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaa > 2:6667461/1‑93 (MQ=255)
tACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaaa > 2:3975400/1‑93 (MQ=255)
tACCAGCAACATATTGCCCGACATCGTCCACAGATACGCCGCTGAGCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaaa < 2:3454111/93‑1 (MQ=255)
aCCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaaaa < 1:203920/93‑1 (MQ=255)
ccAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAg > 2:4446899/1‑93 (MQ=255)
ccAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAg < 2:4771897/93‑1 (MQ=255)
aGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCa > 2:8343062/1‑93 (MQ=255)
aGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCa < 1:6885690/93‑1 (MQ=255)
gCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCaa > 1:7913071/1‑93 (MQ=255)
cAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAAt < 1:9771359/93‑1 (MQ=255)
aaCATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATg < 2:500509/93‑1 (MQ=255)
aCATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATgg < 2:1667840/93‑1 (MQ=255)
aCATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATgg < 1:9349896/93‑1 (MQ=255)
cATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGt > 2:606134/1‑93 (MQ=255)
ttttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGa > 2:4323266/1‑93 (MQ=255)
ttttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGa > 1:8523960/1‑93 (MQ=255)
ttttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGa > 1:3019063/1‑93 (MQ=255)
tttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGat > 2:2753506/1‑93 (MQ=255)
ttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGata < 1:281509/93‑1 (MQ=255)
ttGCCCGACAGCATCCACAGACACGCCGCTGAACCGATAGTGAGAATGAGCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGata < 2:3179783/93‑1 (MQ=255)
tGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGatat < 2:4847332/93‑1 (MQ=255)
tGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGatat < 1:9318750/93‑1 (MQ=255)
gCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATAtt < 2:237819/93‑1 (MQ=255)
gCCAGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATAtt < 2:9191378/93‑1 (MQ=255)
cGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTgcg > 1:3575816/1‑93 (MQ=255)
gACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTgcgc > 2:3658304/1‑93 (MQ=255)
aCAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGca > 2:6294977/1‑93 (MQ=255)
aCAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGca > 1:5696361/1‑93 (MQ=255)
aTCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCg < 1:3322902/93‑1 (MQ=255)
tCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc < 2:2991584/93‑1 (MQ=255)
tCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc > 2:3936191/1‑93 (MQ=255)
tCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc > 2:2501198/1‑93 (MQ=255)
ccACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCt < 1:8183103/93‑1 (MQ=255)
caGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGt < 2:2211223/93‑1 (MQ=255)
caGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGt > 2:6899065/1‑93 (MQ=255)
caGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGt < 1:6834170/93‑1 (MQ=255)
gATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTa > 1:6306559/1‑93 (MQ=255)
gATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTa > 1:4016378/1‑93 (MQ=255)
aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa < 2:8210107/93‑1 (MQ=255)
aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa < 1:354059/93‑1 (MQ=255)
tACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAc > 2:1222110/1‑93 (MQ=255)
tACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAc > 2:1099838/1‑93 (MQ=255)
tACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAc < 2:7067593/93‑1 (MQ=255)
tACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAc < 1:5185153/93‑1 (MQ=255)
tACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCAAATCGCTGGTTAAc > 1:7289378/1‑93 (MQ=255)
aCGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAcc < 2:1253475/93‑1 (MQ=255)
aCGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAcc < 1:7209230/93‑1 (MQ=255)
cgccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAccc < 2:3815517/93‑1 (MQ=255)
ccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCg < 2:983982/93‑1 (MQ=255)
gcTGAACCGATAGTGAGAATGATCCCCCGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGcc > 1:1936451/1‑93 (MQ=255)
tGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAg < 2:1793873/93‑1 (MQ=255)
aCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCaa > 2:5638549/1‑93 (MQ=255)
ccGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAAc > 2:8844535/1‑93 (MQ=255)
cGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACg > 1:3499431/1‑93 (MQ=255)
cGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACg < 1:8286867/93‑1 (MQ=255)
gATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGa > 2:6052030/1‑93 (MQ=255)
tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTGACCCCGCCAGCAACGAgg > 2:7610028/1‑93 (MQ=255)
tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAgg < 1:1105543/93‑1 (MQ=255)
aaGTGAGAATGATCCCCTGCAACAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAgg < 2:9505715/92‑1 (MQ=255)
aGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgc < 2:8108336/93‑1 (MQ=255)
gTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgcg > 1:2589875/1‑93 (MQ=255)
gTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgcg < 2:4759656/93‑1 (MQ=255)
gTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgcg > 1:5109504/1‑93 (MQ=255)
gTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgcg > 1:9820523/1‑93 (MQ=255)
gTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgcg > 2:693594/1‑93 (MQ=255)
tGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgcgc > 1:3680696/1‑93 (MQ=255)
gaATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTAc < 2:5307280/93‑1 (MQ=255)
aTGATCCCCTGCCCCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCg < 2:7990236/93‑1 (MQ=255)
aTGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCg > 1:1521665/1‑93 (MQ=255)
tGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGa < 1:4482864/93‑1 (MQ=255)
tGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGa > 1:1612196/1‑93 (MQ=255)
tGACCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGa < 2:2256527/93‑1 (MQ=255)
ccccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGCgttg > 1:6952039/1‑93 (MQ=255)
ccccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttg > 2:1432283/1‑93 (MQ=255)
ccccTGCACCAGTCCCGGCAGACGCACAAAAGCAACGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttg > 2:7838819/1‑93 (MQ=255)
ccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttgtt < 1:4256602/93‑1 (MQ=255)
ccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttgtt > 1:6086738/1‑93 (MQ=255)
tGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCa > 1:8472647/1‑93 (MQ=255)
tGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCa > 2:18241/1‑93 (MQ=255)
gCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCaa < 2:5524048/93‑1 (MQ=255)
gCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCaa < 1:147731/93‑1 (MQ=255)
aCCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATg > 2:3101856/1‑93 (MQ=255)
aCCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATg < 2:4203863/93‑1 (MQ=255)
cAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATgcg < 1:5990185/93‑1 (MQ=255)
cAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGAGCACATCGCTGGTTAACCCCGCCAGCAACAAGGTGATACTGAGCTGTTCAAtcgg > 2:680648/1‑90 (MQ=255)
|
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCG > NC_000913/2306166‑2306344
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCGA > NC_000913/2306163‑2306349
|
GCCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTC > SRR4302540.6431797/1‑94 (MQ=60)
GCCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTC > SRR4302540.6641078/1‑94 (MQ=60)
CCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCC < SRR4302540.6973173/94‑1 (MQ=60)
CCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCAGCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCC > SRR4302540.4861370/1‑94 (MQ=60)
CATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCC < SRR4302540.7570617/94‑1 (MQ=60)
CATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCC > SRR4302540.2242450/1‑94 (MQ=60)
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCG < SRR4302540.3560844/94‑1 (MQ=60)
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCG < SRR4302540.8352343/94‑1 (MQ=60)
CCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGC > SRR4302540.9334629/1‑94 (MQ=60)
CCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGC < SRR4302540.8783260/94‑1 (MQ=60)
AGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAG > SRR4302540.5988818/1‑94 (MQ=60)
AGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAG > SRR4302540.171992/1‑94 (MQ=60)
AGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAG > SRR4302540.7498854/1‑94 (MQ=60)
GATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGA > SRR4302540.1232378/1‑94 (MQ=60)
GATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGA > SRR4302540.8471942/1‑94 (MQ=60)
TAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACG > SRR4302540.9283186/1‑94 (MQ=60)
TAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACG < SRR4302540.2369816/94‑1 (MQ=60)
AGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGC > SRR4302540.8614007/1‑94 (MQ=60)
GCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCA > SRR4302540.327452/1‑94 (MQ=60)
GCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCA < SRR4302540.2305685/94‑1 (MQ=60)
TTACCAGCAACATTTTGCCCTACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAA > SRR4302540.6970340/1‑94 (MQ=60)
ACCAGTAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAG < SRR4302540.3293596/94‑1 (MQ=60)
ACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAG > SRR4302540.4089661/1‑94 (MQ=60)
ACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAG > SRR4302540.10005657/1‑94 (MQ=60)
ACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAG < SRR4302540.205925/94‑1 (MQ=60)
ACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAG > SRR4302540.5225982/1‑94 (MQ=60)
AGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAA > SRR4302540.195802/1‑94 (MQ=60)
AGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAA > SRR4302540.8005333/1‑94 (MQ=60)
AGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAA < SRR4302540.6962026/94‑1 (MQ=60)
AGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAA < SRR4302540.4074539/94‑1 (MQ=60)
AGCAACATTGTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAA < SRR4302540.6962025/94‑1 (MQ=60)
GCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAAT < SRR4302540.3720015/94‑1 (MQ=60)
CAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATG < SRR4302540.9885920/94‑1 (MQ=60)
CAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATG < SRR4302540.9922501/94‑1 (MQ=60)
CAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATG < SRR4302540.362171/94‑1 (MQ=60)
AACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGG > SRR4302540.3138865/1‑94 (MQ=60)
ACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGT < SRR4302540.9461261/94‑1 (MQ=60)
CGTTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTG < SRR4302540.385068/94‑1 (MQ=60)
ATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGA > SRR4302540.1273757/1‑94 (MQ=60)
ATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGA < SRR4302540.7795250/94‑1 (MQ=60)
ATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGA > SRR4302540.5761455/1‑94 (MQ=60)
ATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGA > SRR4302540.8623008/1‑94 (MQ=60)
ATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGA > SRR4302540.3052247/1‑94 (MQ=60)
TTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATAT < SRR4302540.284272/94‑1 (MQ=60)
TTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATAT < SRR4302540.284273/94‑1 (MQ=60)
TGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATT < SRR4302540.741582/94‑1 (MQ=60)
TGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATT < SRR4302540.6101835/94‑1 (MQ=60)
TGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATT < SRR4302540.9429947/94‑1 (MQ=60)
CCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACCCACAAAAGCAATGGTGATATTGC < SRR4302540.1868225/94‑1 (MQ=60)
CCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCG > SRR4302540.3252426/1‑94 (MQ=60)
CCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCG > SRR4302540.3614869/1‑94 (MQ=60)
CGACAGCAGCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGC < SRR4302540.8197084/94‑1 (MQ=60)
GACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCA > SRR4302540.1257224/1‑94 (MQ=60)
GACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCA < SRR4302540.9441373/94‑1 (MQ=60)
GACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCA > SRR4302540.5759079/1‑94 (MQ=60)
ACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCAC > SRR4302540.3610151/1‑94 (MQ=60)
ACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCAC > SRR4302540.329571/1‑94 (MQ=60)
GCATCCACAGATACGCCGCTGAACCGATAGTGATAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATC < SRR4302540.9840368/94‑1 (MQ=60)
CATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCG > SRR4302540.7295493/1‑94 (MQ=60)
ATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGC > SRR4302540.1562414/1‑94 (MQ=60)
ATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGC > SRR4302540.6543874/1‑94 (MQ=60)
ATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGC < SRR4302540.3359356/94‑1 (MQ=60)
ATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGC > SRR4302540.8292808/1‑94 (MQ=60)
TCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCT < SRR4302540.8684947/94‑1 (MQ=60)
CCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTG < SRR4302540.8278152/94‑1 (MQ=60)
CCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCAGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTG > SRR4302540.3390563/1‑94 (MQ=60)
CACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGG < SRR4302540.4936272/94‑1 (MQ=60)
ACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGT < SRR4302540.5417976/94‑1 (MQ=60)
CAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTT < SRR4302540.6909860/94‑1 (MQ=60)
CAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCGGGTT > SRR4302540.2909910/1‑94 (MQ=60)
AGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTA > SRR4302540.2751496/1‑94 (MQ=60)
AGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTA > SRR4302540.6376790/1‑94 (MQ=60)
AGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTA > SRR4302540.4059638/1‑94 (MQ=60)
GATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAC > SRR4302540.1173357/1‑94 (MQ=60)
ATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAC < SRR4302540.357690/94‑1 (MQ=60)
ATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCAAATCGCTGGTTAAC > SRR4302540.7370722/1‑94 (MQ=60)
TACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACC < SRR4302540.5241599/94‑1 (MQ=60)
ACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCC < SRR4302540.7289599/94‑1 (MQ=60)
CCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGC < SRR4302540.7367221/94‑1 (MQ=60)
CGCTGAACCGATAGTGAGAATGATCCCCCGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCC > SRR4302540.1957550/1‑94 (MQ=60)
TGATCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGC < SRR4302540.663848/94‑1 (MQ=60)
ACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAAC > SRR4302540.6300979/1‑94 (MQ=60)
CCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACG > SRR4302540.3537544/1‑94 (MQ=60)
CGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGA > SRR4302540.1564126/1‑94 (MQ=60)
CGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGA > SRR4302540.7257102/1‑94 (MQ=60)
CGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGA < SRR4302540.8383109/94‑1 (MQ=60)
CGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGA > SRR4302540.9267283/1‑94 (MQ=60)
GATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAG > SRR4302540.5088963/1‑94 (MQ=60)
GATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAG < SRR4302540.3546441/94‑1 (MQ=60)
GATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAG > SRR4302540.5316989/1‑94 (MQ=60)
ATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATGGCTGGTTAACCCCGCCAGCAACGAGG > SRR4302540.1875157/1‑94 (MQ=60)
ATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGG > SRR4302540.6993718/1‑94 (MQ=60)
ATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGG < SRR4302540.9762380/94‑1 (MQ=60)
TAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGC < SRR4302540.1116948/94‑1 (MQ=60)
TAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGC < SRR4302540.7846606/94‑1 (MQ=60)
TAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGC > SRR4302540.4357540/1‑94 (MQ=60)
AGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCG > SRR4302540.9935427/1‑94 (MQ=60)
AGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCG > SRR4302540.2617794/1‑94 (MQ=60)
AGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCG > SRR4302540.5164805/1‑94 (MQ=60)
GTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGC > SRR4302540.3720926/1‑94 (MQ=60)
TGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACCTCGCTGGTTAACCCCGCCAGCAACGCGGCGCT > SRR4302540.2528363/1‑94 (MQ=60)
AATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCG > SRR4302540.1538509/1‑94 (MQ=60)
AATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCG > SRR4302540.1538510/1‑94 (MQ=60)
ATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGA > SRR4302540.1629859/1‑94 (MQ=60)
TGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAG < SRR4302540.4531482/94‑1 (MQ=60)
TCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGCGTTG > SRR4302540.7029392/1‑94 (MQ=60)
CCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTT > SRR4302540.6154478/1‑94 (MQ=60)
CCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTC < SRR4302540.4302911/94‑1 (MQ=60)
CTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCA > SRR4302540.8584572/1‑94 (MQ=60)
CTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCA > SRR4302540.8571043/1‑94 (MQ=60)
CTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCA > SRR4302540.599741/1‑94 (MQ=60)
CTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCA > SRR4302540.5989238/1‑94 (MQ=60)
CTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCA > SRR4302540.1703211/1‑94 (MQ=60)
GCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAAT < SRR4302540.149259/94‑1 (MQ=60)
CACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATG < SRR4302540.6061330/94‑1 (MQ=60)
ACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGC > SRR4302540.8699309/1‑94 (MQ=60)
CCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCG > SRR4302540.9361232/1‑94 (MQ=60)
CAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGC < SRR4302540.6056546/94‑1 (MQ=60)
AGTCCCGGCAGCCGCACAAAAGCAATGGCGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCCCTACCGAGCTGCTCAATACGCT > SRR4302540.1840421/1‑94 (MQ=60)
AGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCT > SRR4302540.4766203/1‑94 (MQ=60)
AGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCT > SRR4302540.6992717/1‑94 (MQ=60)
GTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTC < SRR4302540.1715344/94‑1 (MQ=60)
GTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGACGCGCTACCGAGTTGTTCAATGCGCTC > SRR4302540.4746566/1‑94 (MQ=60)
CCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCGA < SRR4302540.6605274/94‑1 (MQ=60)
CCCGGCAGACGCACAAAAGCAATGGTGATATTGCCCCCATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCGA < SRR4302540.4815150/94‑1 (MQ=60)
|
GCCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCGA > NC_000913/2306163‑2306349
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
