Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,406,831	A→G	intergenic (+33/‑51)	b2290 → / → b2291	putative aminotransferase/putative alpha helix protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,406,831	0	A	G	99.7%	906.9 / NA	286	intergenic (+33/‑51)	b2290/b2291	putative aminotransferase/putative alpha helix protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (191/94); minor base C (1/0); total (192/94)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 353 total aligned reads displayed.

TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCT  >  NC_000913/2406741‑2406919

tatCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCggcggc                                                                                        >  2:4046802/1‑93 (MQ=255)

 atCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGgcggcg                                                                                       >  2:2533071/1‑93 (MQ=255)

 atCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGgcggcg                                                                                       <  1:7699459/93‑1 (MQ=255)

  tCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGt                                                                                      <  2:508227/93‑1 (MQ=255)

    gAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTa                                                                                    <  2:9818315/93‑1 (MQ=255)

    gAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTa                                                                                    >  2:809430/1‑93 (MQ=255)

    gAGCTGTCTCTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTa                                                                                    <  2:8650148/93‑1 (MQ=255)

     aGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGAAGATTGCATCCGGCGGCGTTAt                                                                                   >  1:5503745/1‑93 (MQ=255)

      gCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATc                                                                                  >  1:2522234/1‑93 (MQ=255)

       cTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATcc                                                                                 <  2:3872824/93‑1 (MQ=255)

       cTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATcc                                                                                 <  2:5882356/93‑1 (MQ=255)

        tGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATccc                                                                                >  2:6991720/1‑93 (MQ=255)

        tGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATccc                                                                                >  2:5460184/1‑93 (MQ=255)

         gTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCg                                                                               >  2:4600999/1‑93 (MQ=255)

          tCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGc                                                                              >  1:1715448/1‑93 (MQ=255)

           cTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTCATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGcc                                                                             >  1:5916116/1‑93 (MQ=255)

           cTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGcc                                                                             <  2:1857933/93‑1 (MQ=255)

              tGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCcaca                                                                          >  1:2342013/1‑93 (MQ=255)

               gAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACaa                                                                         >  2:7165825/1‑93 (MQ=255)

               gAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCACCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACaa                                                                         <  2:7956828/93‑1 (MQ=255)

                aGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAAt                                                                        >  1:5890884/1‑93 (MQ=255)

                  cAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGa                                                                      <  1:8402745/93‑1 (MQ=255)

                  cAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGa                                                                      <  1:925856/93‑1 (MQ=255)

                  cAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGa                                                                      <  1:7006713/93‑1 (MQ=255)

                   aaGTCCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAc                                                                     <  2:5187518/93‑1 (MQ=255)

                    aGTTCGCCCTTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTCCACTCCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAcc                                                                    <  2:3417682/93‑1 (MQ=255)

                     gTTCGGGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCt                                                                   <  1:519849/93‑1 (MQ=255)

                     gTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCt                                                                   >  2:260133/1‑93 (MQ=255)

                       tCGCGCTTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCtga                                                                 <  1:1959240/93‑1 (MQ=255)

                         gcgcgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCtgatg                                                               <  2:5774918/93‑1 (MQ=255)

                           gcgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTgatgat                                                             >  2:7485619/1‑93 (MQ=255)

                            cgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGatgatg                                                            >  2:328430/1‑93 (MQ=255)

                             gtgtCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGt                                                           >  2:8956769/4‑93 (MQ=255)

                             gTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGatgatgc                                                           >  1:2247082/1‑92 (MQ=255)

                             gTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGt                                                           >  2:6446508/1‑93 (MQ=255)

                              tttCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtc                                                          >  2:565011/1‑93 (MQ=255)

                               ttCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtca                                                         >  2:9334006/1‑93 (MQ=255)

                                tCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtcat                                                        >  2:3196602/1‑93 (MQ=255)

                                  cTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtcatca                                                      <  1:5789365/93‑1 (MQ=255)

                                  cTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCAGCGGCGTTATCCCGCCACAATGACCTGATGATGtcatca                                                      >  1:8333704/1‑93 (MQ=255)

                                    ttCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATa                                                    >  2:1497523/1‑93 (MQ=255)

                                     tCTGGTTATCATCAGCTGTAATCTTCATTTCACTGCCGGAGATTGCATCCTGCGGGGTTACCCCGCGGCAATAGCCTGATGGTGCcatcatcc                                                   >  1:8830494/1‑91 (MQ=255)

                                        ggTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTa                                                >  1:9954369/1‑93 (MQ=255)

                                         gTTATCATCAGCTTTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTaa                                               <  1:279781/93‑1 (MQ=255)

                                         gTTATCATCAGCTGTATTCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTaa                                               <  2:6573197/93‑1 (MQ=255)

                                         gTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTaa                                               >  1:508709/1‑93 (MQ=255)

                                           tATCATCAGCTTTAATTTTAATTTCACTGCCGGAGATTCCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAgg                                             <  1:3564079/93‑1 (MQ=255)

                                           tATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAgg                                             <  1:273829/93‑1 (MQ=255)

                                                tcaGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACt                                        >  1:7224342/1‑93 (MQ=255)

                                                 caGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTa                                       <  2:210937/93‑1 (MQ=255)

                                                 caGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTa                                       <  1:4185736/93‑1 (MQ=255)

                                                 caGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTa                                       <  1:1542856/93‑1 (MQ=255)

                                                    cggTATTCTTATTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGa                                    <  2:143694/91‑1 (MQ=255)

                                                    cTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCTTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGa                                    <  2:6699986/93‑1 (MQ=255)

                                                     tGTAATTTTAATTTCCCTGCCGGATATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa                                   <  2:2318435/93‑1 (MQ=255)

                                                     tGTAATCTTAATTTCACTGCCTGTGATTGTATCCTTCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa                                   >  2:9269433/1‑93 (MQ=255)

                                                     tGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa                                   >  2:3056293/1‑93 (MQ=255)

                                                     tGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa                                   >  2:7385954/1‑93 (MQ=255)

                                                      gTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaaa                                  <  1:1828910/93‑1 (MQ=255)

                                                         aTCTTAATTTCACTGCCGGAGATTGCATCGGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACag                               <  1:6613086/93‑1 (MQ=255)

                                                          tCTTAATTTCGCTGCCGGAGATTCCACCCGGCGGCGTCCCCCCGCCACAATGAACTGATGATGTCATCATACGTAAGGTCACTATGAAACaga                              <  1:9483278/93‑1 (MQ=255)

                                                          tCTTAATTTCACTGCGGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACaga                              <  2:6085744/93‑1 (MQ=255)

                                                           cTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACagag                             >  1:3983702/1‑93 (MQ=255)

                                                           cTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACagag                             >  2:3687138/1‑93 (MQ=255)

                                                             tAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGcc                           <  1:8081541/93‑1 (MQ=255)

                                                             tAATTTCACGCCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGcc                           <  2:1230458/93‑1 (MQ=255)

                                                              aaTTTCTCGGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCa                          <  2:875470/93‑1 (MQ=255)

                                                              aaTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCa                          >  1:7518996/1‑93 (MQ=255)

                                                              aaTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCa                          >  2:962225/1‑93 (MQ=255)

                                                               aTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAt                         <  1:7288301/93‑1 (MQ=255)

                                                               aTTTCACGCCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAt                         <  1:2533248/93‑1 (MQ=255)

                                                                tttCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtt                        <  1:4637485/93‑1 (MQ=255)

                                                                 tccccTGCCGGAGATTCCATCGGGAGACGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAttt                       <  1:1258837/89‑1 (MQ=255)

                                                                  tCACTGCGGGAGTTTGCACCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttt                      <  2:9444649/93‑1 (MQ=255)

                                                                  tCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttt                      >  1:8578119/1‑93 (MQ=255)

                                                                    gcTGGCGGAGATTGCACCCGCGGGCGTTATCCCGCCACAATGACTTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttttt                    <  2:9745185/92‑1 (MQ=255)

                                                                    ccTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttttt                    <  1:3195935/92‑1 (MQ=255)

                                                                    aCTGCCGGAGGTTGCATCTCGCGGCGTTATCCCGCCACAATTACCTGATGTTGTCATCATACGTAAGGACACTATGAAACAGAGCCAttttgt                    >  2:1806632/1‑91 (MQ=255)

                                                                     cTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAttttttt                   <  1:8763422/93‑1 (MQ=255)

                                                                      tGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTg                  >  2:911854/1‑93 (MQ=255)

                                                                       gCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGc                 >  1:6099493/1‑93 (MQ=255)

                                                                        ccGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGcc                >  2:6916814/1‑93 (MQ=255)

                                                                        ccGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGcc                >  1:9331073/1‑93 (MQ=255)

                                                                         cGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGccc               >  2:7645278/1‑93 (MQ=255)

                                                                          ggAGTTTGACTCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCa              <  1:5288707/93‑1 (MQ=255)

                                                                          ggAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCa              >  1:4061229/1‑93 (MQ=255)

                                                                          ggAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCa              <  1:9891824/93‑1 (MQ=255)

                                                                           gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATTCGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAt             >  2:2031585/1‑93 (MQ=255)

                                                                           gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAATGTCACTATGAAACAGAGCCATTTTTTTGCCCAt             >  1:9678643/1‑93 (MQ=255)

                                                                           gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCCTTTTTTTGCCCAt             >  1:6549948/1‑93 (MQ=255)

                                                                           gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAt             >  1:5009978/1‑93 (MQ=255)

                                                                              aTTGCATCCGGCGTTTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctc          <  1:1088851/93‑1 (MQ=255)

                                                                               ttGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctct         >  2:4912847/1‑93 (MQ=255)

                                                                               tcccATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctct         <  2:2761197/90‑1 (MQ=255)

                                                                                tGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctctc        <  2:9765045/93‑1 (MQ=255)

                                                                                 gCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTcc       >  1:6310876/1‑93 (MQ=255)

                                                                                  cATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTccc      <  1:10015476/93‑1 (MQ=255)

                                                                                    tCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGc    >  2:8393789/1‑93 (MQ=255)

                                                                                    tCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTCCCCATCTCTCCCGc    >  1:3394404/1‑93 (MQ=255)

                                                                                      cggcggCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCt  >  1:2031338/1‑93 (MQ=255)

TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCT  >  NC_000913/2406741‑2406919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAAC  >  NC_000913/2406738‑2406924

TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCTGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCG                                                                                               <  SRR4302540.5948486/94‑1 (MQ=60)

TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCG                                                                                               <  SRR4302540.10104565/94‑1 (MQ=60)

TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCG                                                                                               <  SRR4302540.3476036/94‑1 (MQ=60)

TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCG                                                                                               <  SRR4302540.3476042/94‑1 (MQ=60)

 GATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGG                                                                                              <  SRR4302540.4278290/94‑1 (MQ=60)

 GATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGG                                                                                              <  SRR4302540.1886075/94‑1 (MQ=60)

   TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCG                                                                                            <  SRR4302540.9708321/94‑1 (MQ=60)

   TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCG                                                                                            <  SRR4302540.8467899/94‑1 (MQ=60)

    ATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGT                                                                                           <  SRR4302540.7787350/94‑1 (MQ=60)

    ATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGT                                                                                           >  SRR4302540.1080235/1‑94 (MQ=60)

    ATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGT                                                                                           >  SRR4302540.7104266/1‑94 (MQ=60)

     TCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTT                                                                                          <  SRR4302540.10028389/94‑1 (MQ=60)

      CGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTA                                                                                         >  SRR4302540.6583556/1‑94 (MQ=60)

      CGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTA                                                                                         >  SRR4302540.6583557/1‑94 (MQ=60)

       GAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTAT                                                                                        >  SRR4302540.7091000/1‑94 (MQ=60)

       GAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGAAGATTGCATCCGGCGGCGTTAT                                                                                        >  SRR4302540.5564360/1‑94 (MQ=60)

        AGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATC                                                                                       >  SRR4302540.2549465/1‑94 (MQ=60)

        AGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATC                                                                                       >  SRR4302540.2549466/1‑94 (MQ=60)

        AGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATC                                                                                       >  SRR4302540.6218423/1‑94 (MQ=60)

         GCTGTCTTTGAGCAAATACACGAGTTTCCTTTCAGGTTATCATCAGCTGTAATCTTAATTACAATGCCGGAGAATGCATCCGGCGGCGTTATAC                                                                                      <  SRR4302540.9069762/94‑1 (MQ=48)

          CTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCC                                                                                     <  SRR4302540.8461374/94‑1 (MQ=60)

          CTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCC                                                                                     <  SRR4302540.8461373/94‑1 (MQ=60)

          CTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCC                                                                                     <  SRR4302540.78136/94‑1 (MQ=60)

           TGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCG                                                                                    >  SRR4302540.1164640/1‑94 (MQ=60)

            GTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCCGCTGTACTCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGC                                                                                   >  SRR4302540.5511822/1‑94 (MQ=60)

            GTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGC                                                                                   >  SRR4302540.1733975/1‑94 (MQ=60)

            GTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGC                                                                                   >  SRR4302540.7400625/1‑94 (MQ=60)

            GTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGC                                                                                   >  SRR4302540.3159625/1‑94 (MQ=60)

             TCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTCATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCC                                                                                  >  SRR4302540.5981472/1‑94 (MQ=60)

             TCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCC                                                                                  <  SRR4302540.1887386/94‑1 (MQ=60)

             TCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCC                                                                                  >  SRR4302540.3769777/1‑94 (MQ=60)

              CTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCA                                                                                 >  SRR4302540.4878767/1‑94 (MQ=60)

              CTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCA                                                                                 >  SRR4302540.4878768/1‑94 (MQ=60)

              CTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCA                                                                                 <  SRR4302540.2222174/94‑1 (MQ=60)

              CTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCA                                                                                 >  SRR4302540.2646486/1‑94 (MQ=60)

              CTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCATAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCA                                                                                 >  SRR4302540.8307730/1‑94 (MQ=60)

               TTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCAC                                                                                >  SRR4302540.4016011/1‑94 (MQ=60)

                TTGAGCAAGTTCGCGCGTTTCTTTTCTGGTTATCATCAGCTGAAATCTTAATTTCACTGCCGGAGATTGCCTCCGGCGGCGTTATCCCGCCACA                                                                               <  SRR4302540.5495294/94‑1 (MQ=60)

                TTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACA                                                                               >  SRR4302540.2367247/1‑94 (MQ=60)

                  GAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAAT                                                                             >  SRR4302540.5955963/1‑94 (MQ=60)

                  GAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAAT                                                                             >  SRR4302540.5955962/1‑94 (MQ=60)

                     CAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAC                                                                          <  SRR4302540.935608/94‑1 (MQ=60)

                     CAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAC                                                                          <  SRR4302540.8886360/94‑1 (MQ=60)

                     CAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAC                                                                          <  SRR4302540.8500267/94‑1 (MQ=60)

                     CAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAC                                                                          <  SRR4302540.7084478/94‑1 (MQ=60)

                      AAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACC                                                                         >  SRR4302540.6217388/1‑94 (MQ=60)

                      AAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACC                                                                         >  SRR4302540.2808687/1‑94 (MQ=60)

                      AAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACC                                                                         <  SRR4302540.1573211/94‑1 (MQ=60)

                      AAGTTCGCGCGTTTCCTTGCTGGTTATCATCAGCTGTAATCTTAATTTAACTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACC                                                                         <  SRR4302540.5504768/94‑1 (MQ=60)

                       AGTCCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCT                                                                        <  SRR4302540.2350096/94‑1 (MQ=60)

                        GTTCGGGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTG                                                                       <  SRR4302540.525425/94‑1 (MQ=60)

                        GTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTG                                                                       >  SRR4302540.5088008/1‑94 (MQ=60)

                        GTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTG                                                                       <  SRR4302540.7371016/94‑1 (MQ=60)

                          TCGCGCTTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGAT                                                                     <  SRR4302540.1980535/94‑1 (MQ=60)

                          TCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGAT                                                                     >  SRR4302540.6539255/1‑94 (MQ=60)

                            GCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGA                                                                   <  SRR4302540.9545755/94‑1 (MQ=60)

                            GCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGA                                                                   >  SRR4302540.3057125/1‑94 (MQ=60)

                             CGCGTTTCCTTTCTGTTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGAT                                                                  <  SRR4302540.8775545/94‑1 (MQ=60)

                             CGCGTTTCCTTTCTGGTTGTCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTCCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGAT                                                                  <  SRR4302540.5083672/94‑1 (MQ=60)

                             CGCGTTTCCTTTCTGGTTATCATCAGCTGTAATTTTAATTCCACTGCCGGAGATTGCATCCGGCGTCGTTACCCCGCCACAATGACCTGATGAT                                                                  <  SRR4302540.8605867/94‑1 (MQ=60)

                             CGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGAT                                                                  <  SRR4302540.9535196/94‑1 (MQ=60)

                             CGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGAT                                                                  <  SRR4302540.6051520/94‑1 (MQ=60)

                             CCCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTCCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGAT                                                                  <  SRR4302540.8610287/94‑1 (MQ=60)

                              GCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATG                                                                 >  SRR4302540.5249533/1‑94 (MQ=60)

                              GCGTTTCCTTTCTGGTTATCAGGAGCTGTAATCTGAAGTTCACTGCCGAAGATTTCAGCCGGCGGCGTTATCCCGCCACAATGACCTGATGATG                                                                 <  SRR4302540.2793045/94‑1 (MQ=60)

                              GCCTTTCCTTTTTGGTTTTCATCAGCTTTAATCTTAATTTCCCTGCCGGAGATTGCACCCGGGGGCGTTTTCCCGCCACAATGACCTGATGATG                                                                 <  SRR4302540.8141085/94‑1 (MQ=57)

                              CCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATG                                                                 <  SRR4302540.2793046/94‑1 (MQ=60)

                               CGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGT                                                                <  SRR4302540.8045750/94‑1 (MQ=60)

                               CGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGT                                                                >  SRR4302540.4052096/1‑94 (MQ=60)

                               CGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGC                                                                >  SRR4302540.2271219/1‑94 (MQ=60)

                               CGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGCTATCCCGCCACAATGACCTGATGATGT                                                                >  SRR4302540.7108727/1‑94 (MQ=60)

                                GTTTCCTTTCTGGTTATCATCAGCTGTAATCTTATTTTCACTGCCGGAGATTGCATCAGGCGGCGTTATCCCGCCACAATGACCTGATGATGTC                                                               >  SRR4302540.2031546/1‑94 (MQ=60)

                                GTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTC                                                               >  SRR4302540.5974955/1‑94 (MQ=60)

                                GTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTC                                                               >  SRR4302540.1572775/1‑94 (MQ=60)

                                GTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTC                                                               >  SRR4302540.851619/1‑94 (MQ=60)

                                GTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTC                                                               >  SRR4302540.7033742/1‑94 (MQ=60)

                                    CCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCA                                                           >  SRR4302540.3245534/1‑94 (MQ=60)

                                    CCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCA                                                           >  SRR4302540.101793/1‑94 (MQ=60)

                                    CCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCAGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCA                                                           >  SRR4302540.8430443/1‑94 (MQ=60)

                                     CTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCAT                                                          <  SRR4302540.5853334/94‑1 (MQ=60)

                                     CTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCAT                                                          >  SRR4302540.585904/1‑94 (MQ=60)

                                     CTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCCGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCAT                                                          >  SRR4302540.1517831/1‑94 (MQ=60)

                                       TTCTGGTTATCATCAGTTGTATTCTTATTTCCACTGCCGGAGATTGCACCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATAC                                                        <  SRR4302540.5815310/94‑1 (MQ=60)

                                       TTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATAC                                                        >  SRR4302540.8932620/1‑94 (MQ=60)

                                       TTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATAC                                                        >  SRR4302540.2562193/1‑94 (MQ=60)

                                       TTCGGTTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGCCGTTATCCCGCCACAATGACCTGATGATGTCATCATAC                                                        <  SRR4302540.9288687/94‑1 (MQ=60)

                                        TCTGTTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACG                                                       <  SRR4302540.7016724/94‑1 (MQ=60)

                                        TCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACG                                                       >  SRR4302540.2011543/1‑94 (MQ=60)

                                        TCTGGTTATCATCACCTGTAATCTTATTTATCTTACCGGAGATTGCACCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACG                                                       <  SRR4302540.10018949/94‑1 (MQ=42)

                                          TGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTA                                                     >  SRR4302540.2609321/1‑94 (MQ=60)

                                          TGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTA                                                     >  SRR4302540.10070564/1‑94 (MQ=60)

                                          TGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTA                                                     >  SRR4302540.5272887/1‑94 (MQ=60)

                                          TGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTA                                                     >  SRR4302540.7359549/1‑94 (MQ=60)

                                          TGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTA                                                     >  SRR4302540.7359548/1‑94 (MQ=60)

                                          TGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTA                                                     >  SRR4302540.5612130/1‑94 (MQ=60)

                                          TGGTTATCATCAGCTGTAATCTTAATTTCACTGCCAGAGATTGCATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTA                                                     <  SRR4302540.3477367/94‑1 (MQ=60)

                                           GGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAA                                                    >  SRR4302540.514162/1‑94 (MQ=60)

                                           GGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAA                                                    >  SRR4302540.3478837/1‑94 (MQ=60)

                                           GGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAA                                                    >  SRR4302540.2366218/1‑94 (MQ=60)

                                            GTTATCATCAGCTTTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAG                                                   <  SRR4302540.282529/94‑1 (MQ=60)

                                            GTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAG                                                   >  SRR4302540.5401915/1‑94 (MQ=60)

                                             TTATCACCAGCTGTAATCTTAATTCCCCTGCCGGAGATTCCCTCCGGCGTCTTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGG                                                  <  SRR4302540.5154044/94‑1 (MQ=53)

                                              TATCATCAGCTTTAATTTTAATTTCACTGCCGGAGATTCCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGT                                                 <  SRR4302540.3603012/94‑1 (MQ=60)

                                              TATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGT                                                 <  SRR4302540.276521/94‑1 (MQ=60)

                                               ATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTC                                                >  SRR4302540.9174489/1‑94 (MQ=60)

                                                TCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCA                                               <  SRR4302540.3968051/94‑1 (MQ=60)

                                                TCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCA                                               >  SRR4302540.4171573/1‑94 (MQ=60)

                                                 CATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCAC                                              >  SRR4302540.9412753/1‑94 (MQ=60)

                                                  ATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACT                                             >  SRR4302540.7304887/1‑94 (MQ=60)

                                                    tggttgtaatttatATTTCACTGCCGGAGTTTCCTGCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTAT                                           <  SRR4302540.4231227/80‑1 (MQ=60)

                                                    CAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTAT                                           <  SRR4302540.4231228/94‑1 (MQ=60)

                                                    CAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTAT                                           <  SRR4302540.1559895/94‑1 (MQ=60)

                                                    CAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTAT                                           >  SRR4302540.881721/1‑94 (MQ=60)

                                                    CAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTAT                                           <  SRR4302540.8260074/94‑1 (MQ=60)

                                                    CAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTACTCATACGTAAGGTCACTCT                                           >  SRR4302540.881722/1‑94 (MQ=60)

                                                    CAGCTGTAATCTTAATTCCCCTGCTGGAGATTGCATCGGGCGCCTTTAACCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTAT                                           <  SRR4302540.1832332/94‑1 (MQ=60)

                                                     AGCTGTAATCTTAATTTCACTGCTGAAGATTGCATCGGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATG                                          <  SRR4302540.133187/94‑1 (MQ=60)

                                                       CTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAA                                        >  SRR4302540.2863512/1‑94 (MQ=60)

                                                        TGTAATCTTAATTGCGCGGCCGGAGATTTCATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAA                                       <  SRR4302540.774904/94‑1 (MQ=60)

                                                         TTAATCTTAATTTCCCGGCGGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAAC                                      <  SRR4302540.5827523/94‑1 (MQ=60)

                                                         GTAATCTTAATTTCCCTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAAC                                      <  SRR4302540.9882792/94‑1 (MQ=60)

                                                         GTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAAC                                      <  SRR4302540.1848918/94‑1 (MQ=60)

                                                         GTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAAC                                      >  SRR4302540.4462091/1‑94 (MQ=60)

                                                           AATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAG                                    >  SRR4302540.4966279/1‑94 (MQ=60)

                                                           AATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAG                                    >  SRR4302540.772484/1‑94 (MQ=60)

                                                           AATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAG                                    >  SRR4302540.1838869/1‑94 (MQ=60)

                                                            ATCTTAATTTCACTGCCGGAGATTGCATCGGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGA                                   <  SRR4302540.6686312/94‑1 (MQ=60)

                                                            ATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGA                                   >  SRR4302540.7406749/1‑94 (MQ=60)

                                                            ATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGA                                   >  SRR4302540.4066637/1‑94 (MQ=60)

                                                             TCTTAATTTCGCTGCCGGAGATTCCACCCGGCGGCGTCCCCCCGCCACAATGAACTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAG                                  <  SRR4302540.9595722/94‑1 (MQ=60)

                                                             TCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAG                                  >  SRR4302540.4026603/1‑94 (MQ=60)

                                                              CTTATTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGC                                 <  SRR4302540.4367774/94‑1 (MQ=60)

                                                              CTTAATTTCACTGCGGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGC                                 <  SRR4302540.664465/94‑1 (MQ=60)

                                                              CTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGC                                 >  SRR4302540.2444718/1‑94 (MQ=60)

                                                                TAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCA                               <  SRR4302540.8175340/94‑1 (MQ=60)

                                                                TAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCA                               >  SRR4302540.7603078/1‑94 (MQ=60)

                                                                 AATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAT                              >  SRR4302540.3447441/1‑94 (MQ=60)

                                                                  atttgagcGCCGGCGATTGCCTCCGGCTGCGTTCGCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATT                             <  SRR4302540.7369632/86‑1 (MQ=60)

                                                                  ATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATT                             <  SRR4302540.7369633/94‑1 (MQ=60)

                                                                  ATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATT                             >  SRR4302540.1200371/1‑94 (MQ=60)

                                                                  ATTTCACGCCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATT                             <  SRR4302540.2560574/94‑1 (MQ=60)

                                                                   TTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTT                            <  SRR4302540.4687136/94‑1 (MQ=60)

                                                                    TTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTT                           >  SRR4302540.8677823/1‑94 (MQ=60)

                                                                     TCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTT                          <  SRR4302540.6646013/94‑1 (MQ=60)

                                                                      CACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTT                         >  SRR4302540.1139019/1‑94 (MQ=60)

                                                                       CCTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTT                        <  SRR4302540.3230643/94‑1 (MQ=60)

                                                                       ACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTT                        >  SRR4302540.3324858/1‑94 (MQ=60)

                                                                        CTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTG                       <  SRR4302540.8865020/94‑1 (MQ=60)

                                                                        CTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCAGTATGAAACAGAGCCATTTTTTTG                       >  SRR4302540.2073210/1‑94 (MQ=60)

                                                                        CTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTG                       >  SRR4302540.5867758/1‑94 (MQ=60)

                                                                         TGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGC                      >  SRR4302540.6167397/1‑94 (MQ=60)

                                                                          GCCGGAGATTGCATCCGGCGGCGTTATCCCGGCACAATGACCTGATGATGTGATCATACGTAAGGTCACTATGAAACAGAGCCATTTTATTGCC                     >  SRR4302540.9442330/1‑94 (MQ=60)

                                                                          GCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCC                     >  SRR4302540.9442332/1‑94 (MQ=60)

                                                                           CCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCC                    >  SRR4302540.2131671/1‑94 (MQ=60)

                                                                            CGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCA                   >  SRR4302540.4105013/1‑94 (MQ=60)

                                                                             ggagtttgacTCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAT                  <  SRR4302540.5346511/84‑1 (MQ=60)

                                                                             GGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAATGTCACTATGAAACAGAGCCATTTTTTTGCCCAT                  >  SRR4302540.9792519/1‑94 (MQ=60)

                                                                             GGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAATGTCACTATGAAACAGAGCCATTTTTTTGCCCAT                  >  SRR4302540.9792521/1‑94 (MQ=60)

                                                                             GGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCCTTTTTTTGCCCAT                  >  SRR4302540.6622601/1‑94 (MQ=60)

                                                                             GGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAT                  >  SRR4302540.921319/1‑94 (MQ=60)

                                                                             GGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAT                  <  SRR4302540.10007323/94‑1 (MQ=60)

                                                                             GGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAT                  >  SRR4302540.5064229/1‑94 (MQ=60)

                                                                              GAGATTGCATCCGGCGGCTTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATC                 <  SRR4302540.8460842/94‑1 (MQ=60)

                                                                               gaATTGCATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCT                <  SRR4302540.7006757/92‑1 (MQ=60)

                                                                               AGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCT                <  SRR4302540.1959326/94‑1 (MQ=60)

                                                                               AGATCGCACCCGGCGGCGTTTCCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCT                <  SRR4302540.5962031/94‑1 (MQ=60)

                                                                                GATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTC               <  SRR4302540.6083255/94‑1 (MQ=60)

                                                                                GATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTC               >  SRR4302540.5315259/1‑94 (MQ=60)

                                                                                GATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTC               <  SRR4302540.5251691/94‑1 (MQ=60)

                                                                                GATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTC               >  SRR4302540.61320/1‑94 (MQ=60)

                                                                                GATTGCACCCGGCGGTGTTAGCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTC               <  SRR4302540.2481452/94‑1 (MQ=60)

                                                                                 ATTGCATCCGGCGTTTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCT              <  SRR4302540.1100025/94‑1 (MQ=60)

                                                                                 ATTGCAGCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCT              <  SRR4302540.9527590/94‑1 (MQ=60)

                                                                                   TGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCC            >  SRR4302540.6381151/1‑94 (MQ=60)

                                                                                     CATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCG          <  SRR4302540.10132064/94‑1 (MQ=60)

                                                                                     CACCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCG          <  SRR4302540.2443394/94‑1 (MQ=60)

                                                                                      ATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGC         >  SRR4302540.9967232/1‑94 (MQ=60)

                                                                                      ATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGC         >  SRR4302540.1670451/1‑94 (MQ=60)

                                                                                      ATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAACTCTCCCGC         >  SRR4302540.4216156/1‑94 (MQ=60)

                                                                                      ATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTCCCCATCTCTCCCGC         >  SRR4302540.3431433/1‑94 (MQ=60)

                                                                                       TCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCC        >  SRR4302540.5393138/1‑94 (MQ=60)

                                                                                       TCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCC        >  SRR4302540.7821051/1‑94 (MQ=60)

                                                                                        CCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCT       <  SRR4302540.9968523/94‑1 (MQ=60)

                                                                                        CCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCT       >  SRR4302540.2053261/1‑94 (MQ=60)

                                                                                          GGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGA     >  SRR4302540.2746369/1‑94 (MQ=60)

                                                                                          GGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGA     >  SRR4302540.5960339/1‑94 (MQ=60)

                                                                                           GCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAA    >  SRR4302540.6017474/1‑94 (MQ=60)

                                                                                           GCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAA    <  SRR4302540.9876929/94‑1 (MQ=60)

                                                                                           GCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAA    >  SRR4302540.1740016/1‑94 (MQ=60)

                                                                                            CGGCGTTCTCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAA   <  SRR4302540.9821922/94‑1 (MQ=60)

                                                                                            CGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCCTTTTTTTGCCCATCTCTCCCGCCTGAAA   >  SRR4302540.3896446/1‑94 (MQ=60)

                                                                                            CGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACACAGCCATCTTTTTGCCCATCTCTCCCGACTGAAA   >  SRR4302540.8930728/1‑94 (MQ=60)

                                                                                             GGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAAC  >  SRR4302540.5479671/1‑94 (MQ=60)

TGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAAC  >  NC_000913/2406738‑2406924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`