Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,669,800	T→C	C186R (TGT→CGT)	hcaB →	2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,669,800	0	T	C	99.3%	857.2 / ‑4.2	272	C186R (TGT→CGT)	hcaB	2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (146/124); total (147/125)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 288 total aligned reads displayed.

ACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCC  >  NC_000913/2669711‑2669889

  acCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGt                                                                                      >  1:7878808/1‑93 (MQ=255)

   ccGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGGCCGCGTGGTa                                                                                     >  2:4161587/1‑93 (MQ=255)

   ccGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTa                                                                                     <  2:7264943/93‑1 (MQ=255)

       cAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGc                                                                                 >  1:9989966/1‑93 (MQ=255)

        aGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGcc                                                                                >  2:5329250/1‑93 (MQ=255)

        aGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGcc                                                                                <  2:4477371/93‑1 (MQ=255)

         gTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCa                                                                               >  1:7296807/1‑93 (MQ=255)

         gTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCa                                                                               >  1:9551510/1‑93 (MQ=255)

         gTAAACATGCCGCAACCGGACTTATTCGCCAACCGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCa                                                                               <  2:74818/93‑1 (MQ=255)

          tAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAg                                                                              >  1:5385169/1‑93 (MQ=255)

           aaaCATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAgg                                                                             >  2:9765183/1‑92 (MQ=255)

               aTGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGAcc                                                                         >  1:9005287/1‑93 (MQ=255)

                tGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCt                                                                        <  2:6257788/93‑1 (MQ=255)

                   cGCAACCGGACTTCTTCGCCAACTGTCTTATGAACTGGCACCGAAAGTGCGGGTGAATTGCGTCGTCCCGCGTGGTATGGCCAGCGACCTgcg                                                                     <  2:292748/93‑1 (MQ=255)

                   cGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTgcg                                                                     >  2:1475211/1‑93 (MQ=255)

                     cAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGcgcg                                                                   >  1:9331664/1‑93 (MQ=255)

                      aaCCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGTCCCGCGTGGTATGGCCAGCGACCTGCGCgg                                                                  >  1:8705220/1‑93 (MQ=255)

                       aCCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGc                                                                 >  2:2519754/1‑93 (MQ=255)

                        ccGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGcc                                                                >  2:5685633/1‑93 (MQ=255)

                         cGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGccc                                                               >  2:4366163/1‑93 (MQ=255)

                          ggACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCca                                                              >  1:7717284/1‑93 (MQ=255)

                          ggACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCca                                                              >  1:6456708/1‑93 (MQ=255)

                           gACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCcac                                                             >  1:8311776/1‑93 (MQ=255)

                           gACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCcac                                                             >  1:1419832/1‑93 (MQ=255)

                             cTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAg                                                           <  1:2122508/93‑1 (MQ=255)

                              ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGTCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAgg                                                          >  1:6993433/1‑93 (MQ=255)

                              ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAgg                                                          <  1:1020430/93‑1 (MQ=255)

                              ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAgg                                                          <  2:6438925/93‑1 (MQ=255)

                              ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAgg                                                          >  2:8542672/1‑93 (MQ=255)

                              ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAgg                                                          >  1:4804876/1‑93 (MQ=255)

                               tATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGgc                                                         >  1:6777420/1‑93 (MQ=255)

                                aTTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGgcg                                                        >  1:3379383/1‑93 (MQ=255)

                                 ttCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGgcgc                                                       >  2:9015278/1‑93 (MQ=255)

                                 ttCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTAGGCCCGCGGGGTATGGCCAGCGACCTGCGCGGCCCACAGgcgc                                                       >  2:3236166/1‑93 (MQ=255)

                                   cGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTc                                                     <  1:1213557/93‑1 (MQ=255)

                                    gCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCg                                                    <  2:5079104/93‑1 (MQ=255)

                                     ccAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCgg                                                   <  2:360694/93‑1 (MQ=255)

                                     ccAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCgg                                                   >  1:2405283/1‑93 (MQ=255)

                                      cAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCggg                                                  <  1:4755747/93‑1 (MQ=255)

                                      cAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCggg                                                  >  2:9911115/1‑93 (MQ=255)

                                       aaCTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGc                                                 <  2:868975/93‑1 (MQ=255)

                                       aaCTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGc                                                 >  2:3093901/1‑93 (MQ=255)

                                       aaCTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGc                                                 >  1:2591164/1‑93 (MQ=255)

                                        aCTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCa                                                >  2:7067351/1‑93 (MQ=255)

                                         cTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCaa                                               >  1:8167843/1‑93 (MQ=255)

                                          tGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCaaa                                              >  2:4726797/1‑93 (MQ=255)

                                           ggCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAg                                             <  2:3393946/93‑1 (MQ=255)

                                            gCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAgg                                            >  1:7734289/1‑92 (MQ=255)

                                            gCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAgg                                            >  1:3047857/1‑92 (MQ=255)

                                            gCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGt                                            >  2:7922993/1‑93 (MQ=255)

                                              ttATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGa                                          >  1:1732105/1‑93 (MQ=255)

                                              ttATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGa                                          <  1:5333466/93‑1 (MQ=255)

                                              ttATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGa                                          <  1:10039199/93‑1 (MQ=255)

                                               tATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGaa                                         >  1:6073157/1‑93 (MQ=255)

                                               tATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTCCGCGGCCCACAGGCGCTCGGCCAAAGTGaa                                         >  2:8719003/1‑93 (MQ=255)

                                                aTGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGaaa                                        <  1:5361178/93‑1 (MQ=255)

                                                  gAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAAcc                                      <  1:1991856/93‑1 (MQ=255)

                                                  gAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAAcc                                      <  2:5861819/93‑1 (MQ=255)

                                                   aaCTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGGATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCt                                     >  2:7726509/1‑93 (MQ=255)

                                                    aCTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGGGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTc                                    >  2:6030766/1‑93 (MQ=255)

                                                    aCTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTc                                    >  1:8450215/1‑93 (MQ=255)

                                                        gCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATa                                >  1:3827851/1‑93 (MQ=255)

                                                         cACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATaa                               >  1:8043337/1‑93 (MQ=255)

                                                          aCCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATaag                              >  2:3791251/1‑92 (MQ=255)

                                                          aCCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAAt                              <  2:3940749/93‑1 (MQ=255)

                                                           ccGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATaa                               <  2:7652000/91‑1 (MQ=255)

                                                           ccGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATaa                               >  1:7652001/1‑91 (MQ=255)

                                                           ccGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATg                             >  1:2502361/1‑93 (MQ=255)

                                                            cGAAAGTGCGGGTGATTGGCGTCGGCCCGCGTGGTATGGCCATCGACCTGCGCGGCCTACAGGCGCTCGTGCAAAGTGATACTTTGATAATGc                            >  2:9273373/1‑93 (MQ=255)

                                                             gAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCa                           <  1:9438236/93‑1 (MQ=255)

                                                             gAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCa                           >  2:3356404/1‑93 (MQ=255)

                                                              aaaGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg                          <  1:4162506/93‑1 (MQ=255)

                                                              aaaGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg                          <  1:4400249/93‑1 (MQ=255)

                                                               aaGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGt                         <  1:7401133/93‑1 (MQ=255)

                                                                aGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtc                        <  1:5694939/93‑1 (MQ=255)

                                                                 gTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtct                       >  1:6340890/1‑93 (MQ=255)

                                                                  tGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCTGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtctc                      <  2:1169011/93‑1 (MQ=255)

                                                                   gCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTctct                     <  2:8274028/93‑1 (MQ=255)

                                                                    gcggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTg                    <  1:3108365/91‑1 (MQ=255)

                                                                     gggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGa                   <  1:860262/93‑1 (MQ=255)

                                                                     gggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGa                   <  1:9687263/93‑1 (MQ=255)

                                                                     gggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGa                   <  1:1165925/93‑1 (MQ=255)

                                                                         gAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGcc               >  1:3178581/1‑93 (MQ=255)

                                                                         gAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGCCAAAGTGAAACCTCGATAATGCAGTCTCTGACGcc               <  1:784958/93‑1 (MQ=255)

                                                                          aaTGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCg              <  1:7100984/93‑1 (MQ=255)

                                                                          aaTGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCg              <  1:930661/93‑1 (MQ=255)

                                                                          aaTGGCGTCGGCACGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCg              <  2:4215030/93‑1 (MQ=255)

                                                                            tGGGGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGga            <  1:3632522/93‑1 (MQ=255)

                                                                            tGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGga            >  1:6690690/1‑93 (MQ=255)

                                                                             ggCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGgag           >  1:3743628/1‑93 (MQ=255)

                                                                             ggCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGgag           >  2:2009027/1‑93 (MQ=255)

                                                                              gCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGgaga          <  2:1725878/93‑1 (MQ=255)

                                                                                gTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGcaa        >  1:2866160/1‑93 (MQ=255)

                                                                                gTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGaaa        >  2:8004297/1‑93 (MQ=255)

                                                                                  cGGCCCGCGTGGTATGTCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAAt      <  1:4506891/93‑1 (MQ=255)

                                                                                  cGGCCCGCGTGGTATGGCAAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAAt      <  2:1927113/93‑1 (MQ=255)

                                                                                   ggCCCGCGTGGTATGGCCAGTGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAAtt     >  2:3505543/1‑93 (MQ=255)

                                                                                   ggCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAAtt     <  1:2333848/93‑1 (MQ=255)

                                                                                      ccGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTgcc  >  1:7602568/1‑93 (MQ=255)

                                                                                      ccGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTgcc  <  1:5991350/93‑1 (MQ=255)

ACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCC  >  NC_000913/2669711‑2669889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCGCC  >  NC_000913/2669707‑2669892

CTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGC                                                                                              <  SRR4302540.8532680/94‑1 (MQ=60)

CTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGC                                                                                              >  SRR4302540.3969121/1‑94 (MQ=60)

CTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGC                                                                                              >  SRR4302540.660614/1‑94 (MQ=60)

CTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGC                                                                                              >  SRR4302540.9649250/1‑94 (MQ=60)

CTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGATTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGC                                                                                              >  SRR4302540.6535968/1‑94 (MQ=60)

 TGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCG                                                                                             >  SRR4302540.7108916/1‑94 (MQ=60)

 TGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCG                                                                                             >  SRR4302540.8928863/1‑94 (MQ=60)

  GTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGT                                                                                            <  SRR4302540.1531547/94‑1 (MQ=60)

   TACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTG                                                                                           >  SRR4302540.7932160/1‑94 (MQ=60)

     CACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGT                                                                                         >  SRR4302540.7970821/1‑94 (MQ=60)

      ACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTA                                                                                        >  SRR4302540.10058747/1‑94 (MQ=60)

      ACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTA                                                                                        >  SRR4302540.4285161/1‑94 (MQ=60)

        CGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATG                                                                                      <  SRR4302540.702304/94‑1 (MQ=60)

         GCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGG                                                                                     <  SRR4302540.5405981/94‑1 (MQ=60)

          CCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGC                                                                                    >  SRR4302540.10106405/1‑94 (MQ=60)

           CAGTCACCATGCCGCAACCAGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCC                                                                                   <  SRR4302540.8646944/94‑1 (MQ=60)

            AGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCA                                                                                  >  SRR4302540.9664490/1‑94 (MQ=60)

            AGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCA                                                                                  >  SRR4302540.7378241/1‑94 (MQ=60)

             GTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAG                                                                                 <  SRR4302540.4791324/94‑1 (MQ=60)

             GTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAG                                                                                 >  SRR4302540.5444399/1‑94 (MQ=60)

             GTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAG                                                                                 >  SRR4302540.3134189/1‑94 (MQ=60)

             GTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAG                                                                                 >  SRR4302540.1429662/1‑94 (MQ=60)

                AACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGC                                                                              >  SRR4302540.6075237/1‑94 (MQ=60)

                AACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGA                                                                              >  SRR4302540.8515150/1‑94 (MQ=60)

                 ACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGAC                                                                             >  SRR4302540.7252539/1‑94 (MQ=60)

                  CATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACC                                                                            >  SRR4302540.9113323/1‑94 (MQ=60)

                  CATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACC                                                                            >  SRR4302540.2493413/1‑94 (MQ=60)

                   ATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCT                                                                           >  SRR4302540.7438632/1‑94 (MQ=60)

                    TGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTG                                                                          >  SRR4302540.810700/1‑94 (MQ=60)

                     GCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTTGGCCCGCGTGGTATGGCCAGCGACCTGC                                                                         <  SRR4302540.2503686/94‑1 (MQ=60)

                      CCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCG                                                                        <  SRR4302540.612389/94‑1 (MQ=60)

                      CCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCG                                                                        <  SRR4302540.2596264/94‑1 (MQ=60)

                       CGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGC                                                                       >  SRR4302540.4816897/1‑94 (MQ=60)

                        GCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCG                                                                      >  SRR4302540.9442928/1‑94 (MQ=60)

                         CAACCGGTCTTATTCGCAAACTGGCTTATGAACTGGCACCGAGAGTGCGGGGGAATGGCGTGGGCCCGCGTGGTATGGCCAGCGACCTGCGCGG                                                                     <  SRR4302540.9729699/94‑1 (MQ=60)

                         CAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGTCCCGCGTGGTATGGCCAGCGACCTGCGCGG                                                                     >  SRR4302540.8806266/1‑94 (MQ=60)

                         CAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGG                                                                     >  SRR4302540.4396210/1‑94 (MQ=60)

                         CAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGG                                                                     >  SRR4302540.350054/1‑94 (MQ=60)

                          AACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGC                                                                    >  SRR4302540.793819/1‑94 (MQ=60)

                          AACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGC                                                                    <  SRR4302540.5376598/94‑1 (MQ=60)

                           ACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCC                                                                   >  SRR4302540.3282878/1‑94 (MQ=60)

                           ACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCC                                                                   <  SRR4302540.7729549/94‑1 (MQ=60)

                             CGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCA                                                                 >  SRR4302540.6528578/1‑94 (MQ=60)

                             CGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCA                                                                 >  SRR4302540.6398737/1‑94 (MQ=60)

                             CGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCA                                                                 >  SRR4302540.7806477/1‑94 (MQ=60)

                             CGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCA                                                                 <  SRR4302540.720569/94‑1 (MQ=60)

                             CGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGCCCCGCGTGGAATGGCCAGCGACtcgccaggacca                                                                 >  SRR4302540.6399073/1‑82 (MQ=60)

                              GGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGGCCTGCGCGGCCCAC                                                                >  SRR4302540.8790445/1‑94 (MQ=60)

                              GGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCAC                                                                >  SRR4302540.7821065/1‑94 (MQ=60)

                              GGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCAC                                                                >  SRR4302540.7960441/1‑94 (MQ=60)

                              GGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCAC                                                                >  SRR4302540.8408262/1‑94 (MQ=60)

                              GGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCAC                                                                >  SRR4302540.314981/1‑94 (MQ=60)

                              GGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCAC                                                                >  SRR4302540.1435187/1‑94 (MQ=60)

                                ACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAG                                                              <  SRR4302540.7058201/94‑1 (MQ=60)

                                ACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAG                                                              <  SRR4302540.9440076/94‑1 (MQ=60)

                                 CTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGACTGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGTCCACAGG                                                             >  SRR4302540.2798996/1‑94 (MQ=60)

                                 CTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGTCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGG                                                             >  SRR4302540.7071053/1‑94 (MQ=60)

                                 CTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGG                                                             <  SRR4302540.2145279/94‑1 (MQ=60)

                                 CTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGG                                                             <  SRR4302540.2145280/94‑1 (MQ=60)

                                 CTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGG                                                             >  SRR4302540.4856300/1‑94 (MQ=60)

                                 CTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGG                                                             >  SRR4302540.3743550/1‑94 (MQ=60)

                                 CTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGCATGGCCAGCGACCTGCGCGGGCCACAGG                                                             >  SRR4302540.7380457/1‑94 (MQ=60)

                                  TTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGC                                                            <  SRR4302540.9443574/94‑1 (MQ=60)

                                  TTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGC                                                            <  SRR4302540.1903551/94‑1 (MQ=60)

                                  TTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGC                                                            >  SRR4302540.2585418/1‑94 (MQ=60)

                                  TTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGC                                                            <  SRR4302540.1030785/94‑1 (MQ=60)

                                  TTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGC                                                            >  SRR4302540.6852336/1‑94 (MQ=60)

                                  TTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGC                                                            <  SRR4302540.143284/94‑1 (MQ=60)

                                  TTATTCGCCAACGGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGC                                                            <  SRR4302540.9443575/94‑1 (MQ=60)

                                   TATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCG                                                           >  SRR4302540.6626935/1‑94 (MQ=60)

                                   TATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCG                                                           >  SRR4302540.3416287/1‑94 (MQ=60)

                                    ATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGC                                                          >  SRR4302540.7126647/1‑94 (MQ=60)

                                     TTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCT                                                         <  SRR4302540.9120669/94‑1 (MQ=60)

                                      TCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTC                                                        <  SRR4302540.4810675/94‑1 (MQ=60)

                                       CGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCG                                                       <  SRR4302540.1225995/94‑1 (MQ=60)

                                        GCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGG                                                      >  SRR4302540.3125180/1‑94 (MQ=60)

                                        GCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGG                                                      >  SRR4302540.2431222/1‑94 (MQ=60)

                                        GCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGG                                                      >  SRR4302540.379494/1‑94 (MQ=60)

                                        GCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGG                                                      <  SRR4302540.1085793/94‑1 (MQ=60)

                                         CCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGG                                                     <  SRR4302540.5481993/94‑1 (MQ=60)

                                          CAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGC                                                    <  SRR4302540.4806489/94‑1 (MQ=60)

                                          CAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGC                                                    >  SRR4302540.2619106/1‑94 (MQ=60)

                                           AACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCA                                                   <  SRR4302540.2364273/94‑1 (MQ=60)

                                           AACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCA                                                   <  SRR4302540.3308607/94‑1 (MQ=60)

                                            ACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAA                                                  >  SRR4302540.8262693/1‑94 (MQ=60)

                                            ACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAA                                                  >  SRR4302540.1891008/1‑94 (MQ=60)

                                              TGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAG                                                <  SRR4302540.7992696/94‑1 (MQ=60)

                                              TGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAG                                                <  SRR4302540.9275524/94‑1 (MQ=60)

                                              TGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAG                                                <  SRR4302540.5443794/94‑1 (MQ=60)

                                               GGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGG                                               >  SRR4302540.7824584/1‑94 (MQ=60)

                                               GGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGG                                               >  SRR4302540.3081298/1‑94 (MQ=60)

                                                GCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTG                                              <  SRR4302540.7752662/94‑1 (MQ=60)

                                                GCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTG                                              >  SRR4302540.2130717/1‑94 (MQ=60)

                                                GCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTG                                              <  SRR4302540.5710404/94‑1 (MQ=60)

                                                 CTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGA                                             >  SRR4302540.1750798/1‑94 (MQ=60)

                                                 CTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGA                                             >  SRR4302540.1657948/1‑94 (MQ=60)

                                                  TTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAA                                            <  SRR4302540.10155932/94‑1 (MQ=60)

                                                  TTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAA                                            <  SRR4302540.2276484/94‑1 (MQ=60)

                                                  TTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAA                                            >  SRR4302540.969914/1‑94 (MQ=60)

                                                  TTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAA                                            <  SRR4302540.5391915/94‑1 (MQ=60)

                                                  TTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAA                                            >  SRR4302540.6140687/1‑94 (MQ=60)

                                                    ATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAAC                                          <  SRR4302540.5420064/94‑1 (MQ=60)

                                                    ATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAAC                                          <  SRR4302540.8917874/94‑1 (MQ=60)

                                                     TGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACC                                         <  SRR4302540.758602/94‑1 (MQ=60)

                                                     TGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACC                                         <  SRR4302540.391986/94‑1 (MQ=60)

                                                      aacCTGGCACCGAAAGTGCGGCAGAACGGCGTCGCCCCTCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCT                                        <  SRR4302540.2013444/91‑1 (MQ=60)

                                                      GAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCT                                        >  SRR4302540.9633557/1‑94 (MQ=60)

                                                      GAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCT                                        <  SRR4302540.2013442/94‑1 (MQ=60)

                                                      GAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCT                                        <  SRR4302540.871807/94‑1 (MQ=60)

                                                      GAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCT                                        >  SRR4302540.9428095/1‑94 (MQ=60)

                                                       AACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTC                                       >  SRR4302540.8548321/1‑94 (MQ=60)

                                                         CTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGA                                     <  SRR4302540.7568355/94‑1 (MQ=60)

                                                           GGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATA                                   >  SRR4302540.3869505/1‑94 (MQ=60)

                                                            GCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAA                                  >  SRR4302540.8136792/1‑94 (MQ=60)

                                                            GCACCGAAAGGGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAA                                  <  SRR4302540.5190449/94‑1 (MQ=60)

                                                             CACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAAT                                 <  SRR4302540.8247310/94‑1 (MQ=60)

                                                             CACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAAT                                 <  SRR4302540.6672716/94‑1 (MQ=60)

                                                              ACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATG                                >  SRR4302540.2529363/1‑94 (MQ=60)

                                                              ACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATA                                >  SRR4302540.7738142/1‑94 (MQ=60)

                                                               CCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGC                               >  SRR4302540.8301538/1‑94 (MQ=60)

                                                                CGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCTGCGACCTGCGAGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCA                              <  SRR4302540.2882965/94‑1 (MQ=60)

                                                                 GAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAG                             <  SRR4302540.9550318/94‑1 (MQ=60)

                                                                 GAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAG                             <  SRR4302540.6511024/94‑1 (MQ=60)

                                                                  AAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGT                            <  SRR4302540.4207627/94‑1 (MQ=60)

                                                                  AAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGT                            <  SRR4302540.4447972/94‑1 (MQ=60)

                                                                  AAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGT                            <  SRR4302540.9700589/94‑1 (MQ=60)

                                                                   AAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTC                           <  SRR4302540.6810880/94‑1 (MQ=60)

                                                                   AAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTC                           <  SRR4302540.7483586/94‑1 (MQ=60)

                                                                    AGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCT                          >  SRR4302540.6411504/1‑94 (MQ=60)

                                                                    AGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCT                          <  SRR4302540.5757642/94‑1 (MQ=60)

                                                                    AGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCT                          <  SRR4302540.1020837/94‑1 (MQ=60)

                                                                     GTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTC                         <  SRR4302540.5959533/94‑1 (MQ=60)

                                                                     GTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTC                         >  SRR4302540.3863813/1‑94 (MQ=60)

                                                                     GTGCGCGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACCGGCGCTCGGGCAAAGTGAACCCTCGATAATGCAGTCTC                         <  SRR4302540.5959532/94‑1 (MQ=60)

                                                                       GCGGGTGAATGGGGTCGGCCCGCGTGGTATGGCCAGCGACATGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTG                       <  SRR4302540.2952647/94‑1 (MQ=60)

                                                                       GCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTG                       >  SRR4302540.7734646/1‑94 (MQ=60)

                                                                       GCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTG                       <  SRR4302540.2952648/94‑1 (MQ=60)

                                                                        gcGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGA                      <  SRR4302540.3142381/92‑1 (MQ=60)

                                                                        CGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGA                      <  SRR4302540.10023261/94‑1 (MQ=60)

                                                                        CGGGCGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGTCAAAGTGAAACCTCGATAATGCAGTCTCTGA                      <  SRR4302540.3142382/94‑1 (MQ=60)

                                                                         GGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAC                     <  SRR4302540.9801219/94‑1 (MQ=60)

                                                                         GGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAC                     >  SRR4302540.10111003/1‑94 (MQ=60)

                                                                         GGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAC                     >  SRR4302540.10111004/1‑94 (MQ=60)

                                                                         GGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAC                     <  SRR4302540.1178019/94‑1 (MQ=60)

                                                                         GGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAC                     <  SRR4302540.869393/94‑1 (MQ=60)

                                                                          GGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACG                    >  SRR4302540.8369549/1‑94 (MQ=60)

                                                                           GTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGC                   >  SRR4302540.6525460/1‑94 (MQ=60)

                                                                           GTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGACCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGC                   >  SRR4302540.7105325/1‑94 (MQ=60)

                                                                           GTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGCCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATACAGTCTCTGACCC                   >  SRR4302540.7105324/1‑94 (MQ=60)

                                                                            TGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACCGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCG                  >  SRR4302540.7745712/1‑94 (MQ=60)

                                                                            TGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCC                  >  SRR4302540.3213122/1‑94 (MQ=60)

                                                                             GAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCG                 >  SRR4302540.4475374/1‑94 (MQ=60)

                                                                             GAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGCCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCG                 <  SRR4302540.793303/94‑1 (MQ=60)

                                                                             GAATGGCGTCGGCCCGCGTGGTATAGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCG                 <  SRR4302540.9609191/94‑1 (MQ=60)

                                                                              AATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGG                <  SRR4302540.940447/94‑1 (MQ=60)

                                                                              AATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGG                >  SRR4302540.1207724/1‑94 (MQ=60)

                                                                              AATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGG                <  SRR4302540.7179996/94‑1 (MQ=60)

                                                                              AATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGG                >  SRR4302540.8165182/1‑94 (MQ=60)

                                                                               ATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGA               >  SRR4302540.1669660/1‑94 (MQ=60)

                                                                               ATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGA               >  SRR4302540.3878566/1‑94 (MQ=60)

                                                                               ATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGA               >  SRR4302540.6764559/1‑94 (MQ=60)

                                                                               ATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGA               <  SRR4302540.622931/94‑1 (MQ=60)

                                                                                gtGCGTCGGCCCGCGTGGTATGGCCAGCCACCTGCGCGGCCCAGAGGCGCTCGGGCAAAGTGAACCCTCGATAATGCAGTCTCTGACGCCGGAG              <  SRR4302540.3672285/92‑1 (MQ=60)

                                                                                TGGGGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAG              <  SRR4302540.3672283/94‑1 (MQ=60)

                                                                                TGGCTGCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAG              <  SRR4302540.451634/94‑1 (MQ=60)

                                                                                TGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAG              <  SRR4302540.3672284/94‑1 (MQ=60)

                                                                                TGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAG              >  SRR4302540.3784485/1‑94 (MQ=60)

                                                                                TGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAG              <  SRR4302540.5422406/94‑1 (MQ=60)

                                                                                TGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAG              <  SRR4302540.7937031/94‑1 (MQ=60)

                                                                                TGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAG              <  SRR4302540.451638/94‑1 (MQ=60)

                                                                                  GCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGCA            >  SRR4302540.1119763/1‑94 (MQ=60)

                                                                                   CGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGCAA           >  SRR4302540.2897265/1‑94 (MQ=60)

                                                                                   CGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAA           >  SRR4302540.8533386/1‑94 (MQ=60)

                                                                                    GTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAA          >  SRR4302540.4638864/1‑94 (MQ=60)

                                                                                     TCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAAT         <  SRR4302540.8610083/94‑1 (MQ=60)

                                                                                      CGGCCCGCGTGGTATGTCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATT        <  SRR4302540.4555737/94‑1 (MQ=60)

                                                                                       GGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTG       <  SRR4302540.2358995/94‑1 (MQ=60)

                                                                                         CCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCC     >  SRR4302540.7687988/1‑94 (MQ=60)

                                                                                         CCCGCGTGGTATGGCCAGCGACATGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCC     <  SRR4302540.1217027/94‑1 (MQ=60)

                                                                                          CCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCG    <  SRR4302540.6057730/94‑1 (MQ=60)

                                                                                          CCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCG    >  SRR4302540.8784097/1‑94 (MQ=60)

                                                                                           CGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCGC   >  SRR4302540.8627436/1‑94 (MQ=60)

                                                                                           CGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCGC   >  SRR4302540.3426011/1‑94 (MQ=60)

                                                                                            GCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCTGAGAAAATTGCCGCC  <  SRR4302540.7261575/94‑1 (MQ=60)

                                                                                            GCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCGCC  <  SRR4302540.3071232/94‑1 (MQ=60)

CTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCGCC  >  NC_000913/2669707‑2669892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`