Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,005,601 +C coding (237/282 nt) b4568 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,005,6001.C98.6% 1153.0 / 5.1 356coding (236/282 nt)b4568hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (4/1);  new base C (194/157);  total (198/158)
Fisher's exact test for biased strand distribution p-value = 3.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 404 total aligned reads displayed.

CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG  >  NC_000913/4005508‑4005687
                                                                                                 |                                                                                       
cgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTgg                                                                                          >  1:5402156/1‑93 (MQ=255)
cgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTgg                                                                                          <  1:8457755/93‑1 (MQ=255)
  tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcc                                                                                       <  2:8341556/93‑2 (MQ=255)
  tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcc                                                                                       <  1:5316905/93‑2 (MQ=255)
  tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcc                                                                                       <  1:6287531/93‑2 (MQ=255)
   aaTGGTTTGGGCTGGGATTGGGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcct                                                                                      <  2:1259696/93‑3 (MQ=255)
   aaTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcct                                                                                      >  1:8706774/1‑91 (MQ=255)
    aTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctg                                                                                     >  1:4714649/1‑90 (MQ=255)
     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctgt                                                                                    >  1:2258045/1‑89 (MQ=255)
     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctgt                                                                                    <  2:1195939/93‑5 (MQ=255)
     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctgt                                                                                    >  1:7820543/1‑89 (MQ=255)
     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctgt                                                                                    >  2:3577901/1‑89 (MQ=255)
     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctgt                                                                                    >  1:4761872/1‑89 (MQ=255)
     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctgt                                                                                    <  2:5247102/93‑5 (MQ=255)
     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGcctgt                                                                                    >  1:4604174/1‑89 (MQ=255)
       gTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAt                                                                                   >  2:6647824/1‑93 (MQ=255)
        tttGGGCTGGGATTGCGCTTCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGTGTATTGTGTGTGGTGGCCTGTAtc                                                                                  >  1:8933249/1‑93 (MQ=255)
        tttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtc                                                                                  >  2:1100461/1‑93 (MQ=255)
        tctGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtc                                                                                  <  1:9451578/91‑1 (MQ=255)
         ttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtct                                                                                 <  1:1479017/93‑1 (MQ=255)
          tGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtctc                                                                                <  2:4374255/93‑1 (MQ=255)
              cTGGGATTGCGCTGCTTGGCCTGCATGTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctgct                                                                            <  2:6542522/93‑1 (MQ=255)
              cTGGGATTGCGCTGCTCGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctgct                                                                            <  2:946253/93‑1 (MQ=255)
               tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGTTTATGGTGGGCGGTGGCCTGTATCTctgctg                                                                           >  1:7679842/1‑93 (MQ=255)
                 ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGa                                                                         <  2:8485399/93‑1 (MQ=255)
                  gATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAt                                                                        <  2:2192074/93‑1 (MQ=255)
                    ttGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTTGCCTGTATCTCTGCTGGATgg                                                                      >  1:10000472/1‑93 (MQ=255)
                    ttGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATgg                                                                      >  1:3715376/1‑93 (MQ=255)
                      gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGt                                                                    >  2:4718344/1‑93 (MQ=255)
                      gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGt                                                                    <  2:6462178/93‑1 (MQ=255)
                        gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTa                                                                  >  2:3986473/1‑93 (MQ=255)
                         ctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTAc                                                                 <  1:8578436/93‑1 (MQ=255)
                          tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTAcc                                                                >  1:5690937/1‑93 (MQ=255)
                          tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTACATACGCTGATTATGGTGGGCGGTGGGCTGTATCTCTGCTGGATGGGTTAcc                                                                >  2:3774513/1‑93 (MQ=255)
                           gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                               >  2:4887101/1‑93 (MQ=255)
                           gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                               >  2:277239/1‑93 (MQ=255)
                            ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAg                                                              >  1:3929881/1‑93 (MQ=255)
                            ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAg                                                              <  1:7554331/93‑1 (MQ=255)
                            ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAg                                                              >  2:8717084/1‑93 (MQ=255)
                            ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGCCGGTGGCCTGTATCTCTGCTGGGTGGGGTACCAg                                                              >  2:1690244/1‑93 (MQ=255)
                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             <  1:201903/93‑1 (MQ=255)
                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             <  1:1140008/93‑1 (MQ=255)
                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             <  1:4950000/93‑1 (MQ=255)
                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             >  1:3026701/1‑93 (MQ=255)
                               ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                           >  2:7907341/1‑93 (MQ=255)
                               ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                           >  1:1225058/1‑93 (MQ=255)
                                 ccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCt                                                         <  1:7910053/93‑1 (MQ=255)
                                 ccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCt                                                         >  1:481897/1‑93 (MQ=255)
                                  cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTa                                                        >  2:6819525/1‑93 (MQ=255)
                                    gCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACg                                                      >  2:7525654/1‑93 (MQ=255)
                                    gCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACg                                                      <  2:9838489/93‑1 (MQ=255)
                                      tttttATTATCGAAAAATTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACTAGATGCTACgtg                                                    >  2:8961608/2‑93 (MQ=255)
                                      aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                    >  1:4184584/1‑93 (MQ=255)
                                       tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                   <  2:882966/93‑1 (MQ=255)
                                         tGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtg                                                 >  1:9223166/1‑93 (MQ=255)
                                          gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                <  2:2610251/93‑1 (MQ=255)
                                          gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                >  2:2464658/1‑93 (MQ=255)
                                           aTTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                                               >  1:8110204/1‑93 (MQ=255)
                                             tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                             >  2:6504315/1‑93 (MQ=255)
                                             tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                             <  1:3398037/93‑1 (MQ=255)
                                                     aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                                     >  2:7212833/1‑93 (MQ=255)
                                                      aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                    >  1:4311602/1‑93 (MQ=255)
                                                      aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                    <  2:6046134/93‑1 (MQ=255)
                                                       aTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagag                                   >  1:1859941/1‑93 (MQ=255)
                                                        tGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAgg                                  >  2:2304161/1‑93 (MQ=255)
                                                        tGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAgg                                  >  1:283225/1‑93 (MQ=255)
                                                         ggCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                 <  2:3276978/93‑1 (MQ=255)
                                                         ggCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                 <  2:2006347/93‑1 (MQ=255)
                                                         ggCCTGGCGGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                 <  2:9643366/93‑1 (MQ=255)
                                                           ccTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg                               >  2:5175121/1‑93 (MQ=255)
                                                            cTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                              >  2:5437667/1‑93 (MQ=255)
                                                             tGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGtt                             >  1:3287608/1‑93 (MQ=255)
                                                             tGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGtt                             >  1:9654413/1‑93 (MQ=255)
                                                              tgCTTCATACGGTGATTAATGGTGGCCGTTGCCTTGTTCTTTTGTTGAATGGTTTCCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                            <  2:4591133/92‑1 (MQ=255)
                                                              ggCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                            <  1:5558957/93‑1 (MQ=255)
                                                               gCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTc                           <  2:622774/93‑1 (MQ=255)
                                                               gCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTc                           <  2:1441338/93‑1 (MQ=255)
                                                                  gCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGc                        >  1:6838493/1‑93 (MQ=255)
                                                                  gCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGGTTCTGc                        >  1:6736122/1‑93 (MQ=255)
                                                                    aTACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAc                      >  1:6112677/1‑93 (MQ=255)
                                                                     tACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                     >  1:7235615/1‑93 (MQ=255)
                                                                     tACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                     >  2:9270655/1‑93 (MQ=255)
                                                                     tACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                     >  1:5899984/1‑93 (MQ=255)
                                                                        gCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                  <  1:2371814/93‑1 (MQ=255)
                                                                        gCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                  <  1:1740161/93‑1 (MQ=255)
                                                                          tGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcgc                >  1:4516082/1‑93 (MQ=255)
                                                                             ttATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac             >  2:350985/1‑93 (MQ=255)
                                                                              tATGGTGGGCGGGTGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGTCGGTTTCTGCACCTGCGCcaca            <  2:2890877/93‑1 (MQ=255)
                                                                              tATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcaca            >  1:6499822/1‑93 (MQ=255)
                                                                                aTGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg           >  2:8086615/1‑93 (MQ=255)
                                                                                 tggtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg          >  1:7027295/1‑93 (MQ=255)
                                                                                   gtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc        >  2:3016868/1‑93 (MQ=255)
                                                                                   gtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc        <  2:2656211/93‑1 (MQ=255)
                                                                                     gggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa      >  2:5743531/1‑93 (MQ=255)
                                                                                      ggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAg     >  2:3874466/1‑93 (MQ=255)
                                                                                      ggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAg     >  1:9338847/1‑93 (MQ=255)
                                                                                      ggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAg     <  1:985884/93‑1 (MQ=255)
                                                                                       gCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGc    <  1:8842207/93‑1 (MQ=255)
                                                                                          ggTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTg  <  1:6603017/93‑1 (MQ=255)
                                                                                          ggTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTg  >  1:8249656/1‑93 (MQ=255)
                                                                                                 |                                                                                       
CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG  >  NC_000913/4005508‑4005687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 235 total aligned reads displayed.
CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  NC_000913/4005508‑4005694
                                                                                                 |                                                                                             
CGTAATGGTTTGGGCTGGGATTGCGCTTCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGC                                                                                               <  SRR4302540.6149333/94‑1 (MQ=60)
CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGC                                                                                               <  SRR4302540.8555959/94‑1 (MQ=60)
  TAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCct                                                                                             >  SRR4302540.8807837/1‑92 (MQ=60)
  TAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCct                                                                                             <  SRR4302540.5375121/94‑3 (MQ=60)
  TAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCct                                                                                             >  SRR4302540.3660019/1‑92 (MQ=60)
   AATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCctg                                                                                            <  SRR4302540.2261200/94‑4 (MQ=60)
   AATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCctg                                                                                            >  SRR4302540.4765016/1‑91 (MQ=60)
    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGACAAAATGGCCTGGCTGCATGCGCTGATTGTGGTGGGCGGTGGCCTGT                                                                                            >  SRR4302540.5182095/1‑94 (MQ=60)
    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGT                                                                                            >  SRR4302540.4812698/1‑94 (MQ=60)
    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGT                                                                                            >  SRR4302540.169766/1‑94 (MQ=60)
    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGT                                                                                            >  SRR4302540.4653633/1‑94 (MQ=60)
    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGT                                                                                            >  SRR4302540.7911938/1‑94 (MQ=60)
    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGT                                                                                            >  SRR4302540.6630363/1‑94 (MQ=60)
    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGT                                                                                            >  SRR4302540.2282282/1‑94 (MQ=60)
      GGTTTGGGGTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAT                                                                                          <  SRR4302540.2871199/94‑1 (MQ=60)
      GGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTAATTATGGTGGGCGGTGGCCTGTAT                                                                                          <  SRR4302540.5496287/94‑1 (MQ=60)
       GTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCCGCATACGCTGATTATGGTGGGCGGTGGCCTGTATC                                                                                         >  SRR4302540.2878887/1‑94 (MQ=60)
        TCTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCT                                                                                        <  SRR4302540.9563765/94‑1 (MQ=60)
         TTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTC                                                                                       <  SRR4302540.2431572/94‑1 (MQ=60)
         TTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTC                                                                                       <  SRR4302540.1495210/94‑1 (MQ=60)
           GGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTG                                                                                     >  SRR4302540.5902776/1‑94 (MQ=60)
             GCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCT                                                                                   <  SRR4302540.9623090/94‑1 (MQ=60)
             GCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCT                                                                                   <  SRR4302540.6834746/94‑1 (MQ=60)
             GCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCT                                                                                   <  SRR4302540.824445/94‑1 (MQ=60)
              CTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGTTTATGGTGGGCGGTGGCCTGTATCTCTGCTG                                                                                  >  SRR4302540.7766755/1‑94 (MQ=60)
              CTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTG                                                                                  >  SRR4302540.4811743/1‑94 (MQ=60)
               TGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGG                                                                                 >  SRR4302540.137929/1‑94 (MQ=60)
               TGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGG                                                                                 >  SRR4302540.566719/1‑94 (MQ=60)
               TGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGG                                                                                 <  SRR4302540.2391214/94‑1 (MQ=60)
               TGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGG                                                                                 <  SRR4302540.9334584/94‑1 (MQ=60)
               TGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGACTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTCTCTCTGCTGG                                                                                 >  SRR4302540.566720/1‑94 (MQ=60)
                 GGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAT                                                                               <  SRR4302540.8162347/94‑1 (MQ=60)
                 GGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAT                                                                               <  SRR4302540.6870948/94‑1 (MQ=60)
                 GGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAT                                                                               <  SRR4302540.1246890/94‑1 (MQ=60)
                 GGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAT                                                                               <  SRR4302540.6870947/94‑1 (MQ=60)
                   ATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTTGCCTGTATCTCTGCTGGATGG                                                                             >  SRR4302540.10116977/1‑94 (MQ=60)
                   ATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGG                                                                             >  SRR4302540.4693604/1‑94 (MQ=60)
                   ATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGG                                                                             >  SRR4302540.3755914/1‑94 (MQ=60)
                      GCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTT                                                                          <  SRR4302540.9719807/94‑1 (MQ=60)
                       CGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTA                                                                         >  SRR4302540.6110677/1‑94 (MQ=60)
                        GCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTAC                                                                        >  SRR4302540.3389798/1‑94 (MQ=60)
                         CTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACC                                                                       >  SRR4302540.5753590/1‑94 (MQ=60)
                         CTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACC                                                                       <  SRR4302540.8678145/94‑1 (MQ=60)
                         CTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACC                                                                       >  SRR4302540.6779725/1‑94 (MQ=60)
                          TGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCA                                                                      <  SRR4302540.5350397/94‑1 (MQ=60)
                          TGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGGGGCCTGTATCTCTGCTGGATGGGTTACCA                                                                      >  SRR4302540.7923198/1‑94 (MQ=60)
                           GCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAG                                                                     >  SRR4302540.3972377/1‑94 (MQ=60)
                           GCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAG                                                                     <  SRR4302540.6238174/94‑1 (MQ=60)
                            CTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGA                                                                    >  SRR4302540.3059944/1‑94 (MQ=60)
                            CTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGA                                                                    <  SRR4302540.7639038/94‑1 (MQ=60)
                            CTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGA                                                                    <  SRR4302540.8956086/94‑1 (MQ=60)
                             TTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGAT                                                                   <  SRR4302540.98446/94‑1 (MQ=60)
                             TTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGAT                                                                   <  SRR4302540.203894/94‑1 (MQ=60)
                             TTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGAT                                                                   <  SRR4302540.5003479/94‑1 (MQ=60)
                             TTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGAT                                                                   <  SRR4302540.1151931/94‑1 (MQ=60)
                              TGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATG                                                                  >  SRR4302540.1237585/1‑94 (MQ=60)
                              TGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATG                                                                  <  SRR4302540.1898637/94‑1 (MQ=60)
                              TGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACACTGATTATGGTGGGCGGTGCCCTGTATCTCTGCTGGATGGGTTACGAGATG                                                                  >  SRR4302540.8784403/1‑94 (MQ=60)
                               GGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGC                                                                 >  SRR4302540.1160488/1‑94 (MQ=60)
                                GCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCT                                                                >  SRR4302540.487058/1‑94 (MQ=60)
                                  CTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAC                                                              <  SRR4302540.3086012/94‑1 (MQ=60)
                                  CTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAC                                                              >  SRR4302540.8650040/1‑94 (MQ=60)
                                  CTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAC                                                              >  SRR4302540.1840981/1‑94 (MQ=60)
                                  CTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAC                                                              >  SRR4302540.1838276/1‑94 (MQ=60)
                                   TGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACG                                                             <  SRR4302540.5494601/94‑1 (MQ=60)
                                     CATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTG                                                           <  SRR4302540.4276036/94‑1 (MQ=60)
                                      ATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGG                                                          >  SRR4302540.6601708/1‑94 (MQ=60)
                                      ATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGG                                                          >  SRR4302540.8642279/1‑94 (MQ=60)
                                      ATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACGTGG                                                          >  SRR4302540.9074913/1‑94 (MQ=60)
                                       TTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGT                                                         <  SRR4302540.884760/94‑1 (MQ=60)
                                       TTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGT                                                         >  SRR4302540.8478439/1‑94 (MQ=60)
                                       TTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGG                                                         >  SRR4302540.404664/1‑94 (MQ=60)
                                        TTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTG                                                        >  SRR4302540.9333764/1‑94 (MQ=60)
                                        TTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTG                                                        <  SRR4302540.10011190/94‑1 (MQ=60)
                                        TTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTG                                                        <  SRR4302540.8870537/94‑1 (MQ=60)
                                        TTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTG                                                        >  SRR4302540.893694/1‑94 (MQ=60)
                                         TGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGC                                                       <  SRR4302540.4866306/94‑1 (MQ=60)
                                         TGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGC                                                       >  SRR4302540.773523/1‑94 (MQ=60)
                                          GATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCA                                                      >  SRR4302540.8204335/1‑94 (MQ=60)
                                           ATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAC                                                     <  SRR4302540.2290639/94‑1 (MQ=60)
                                            agttccagatcggaagagGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTTCTGGATGGGTTACCAGATGCTACGTGGTGCACT                                                    >  SRR4302540.9792924/19‑94 (MQ=60)
                                            TTATCGAAAAAATGGCCTGGCTGCATAGGCTGATTATGGGGGGAGGCGGCCTGTACCTCTGCTGGATGGGTTggtagctgctgctgggtgccct                                                    >  SRR4302540.3047557/1‑72 (MQ=40)
                                            TTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACT                                                    <  SRR4302540.1923419/94‑1 (MQ=60)
                                             TATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGTGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTG                                                   >  SRR4302540.4872819/1‑94 (MQ=60)
                                             TATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGTGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTG                                                   >  SRR4302540.4872820/1‑94 (MQ=60)
                                             TATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTG                                                   <  SRR4302540.3435091/94‑1 (MQ=60)
                                             TATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTG                                                   >  SRR4302540.4464547/1‑94 (MQ=60)
                                              ATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGA                                                  >  SRR4302540.8353906/1‑94 (MQ=60)
                                               TCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAA                                                 <  SRR4302540.6725906/94‑1 (MQ=60)
                                               TCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAA                                                 <  SRR4302540.6725907/94‑1 (MQ=60)
                                                CGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAA                                                >  SRR4302540.9741574/1‑94 (MQ=60)
                                                 GAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAA                                               >  SRR4302540.4626080/1‑94 (MQ=60)
                                                 GAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAA                                               <  SRR4302540.7160800/94‑1 (MQ=60)
                                                 GAAAAAATGGCCTGGCTGCATACGCTGATTATGGGGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAA                                               >  SRR4302540.1576017/1‑94 (MQ=60)
                                                  AAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAA                                              <  SRR4302540.8690146/94‑1 (MQ=60)
                                                  AAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAA                                              <  SRR4302540.1097612/94‑1 (MQ=60)
                                                   AAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAA                                             <  SRR4302540.7991031/94‑1 (MQ=60)
                                                   AAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAA                                             >  SRR4302540.9196618/1‑94 (MQ=60)
                                                     AAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGA                                           >  SRR4302540.4358540/1‑94 (MQ=60)
                                                     AAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGA                                           >  SRR4302540.4174293/1‑94 (MQ=60)
                                                     AAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGA                                           >  SRR4302540.3392518/1‑94 (MQ=60)
                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          >  SRR4302540.10068724/1‑94 (MQ=60)
                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          >  SRR4302540.1880341/1‑94 (MQ=60)
                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          >  SRR4302540.2502829/1‑94 (MQ=60)
                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          <  SRR4302540.2598846/94‑1 (MQ=60)
                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          >  SRR4302540.2881250/1‑94 (MQ=60)
                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          >  SRR4302540.3003521/1‑94 (MQ=60)
                                                       ATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGG                                         >  SRR4302540.1231401/1‑94 (MQ=60)
                                                       ATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGG                                         >  SRR4302540.428418/1‑94 (MQ=60)
                                                       ATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGG                                         <  SRR4302540.3923719/94‑1 (MQ=60)
                                                        TGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGC                                        <  SRR4302540.5376736/94‑1 (MQ=60)
                                                        TGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGC                                        <  SRR4302540.779697/94‑1 (MQ=60)
                                                          GCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGG                                      >  SRR4302540.5474592/1‑94 (MQ=60)
                                                          GCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGG                                      <  SRR4302540.4790786/94‑1 (MQ=60)
                                                          GCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGG                                      >  SRR4302540.9462630/1‑94 (MQ=60)
                                                           CCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGT                                     >  SRR4302540.6469038/1‑94 (MQ=60)
                                                            CTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTT                                    >  SRR4302540.3271341/1‑94 (MQ=60)
                                                            CTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTT                                    >  SRR4302540.3323567/1‑94 (MQ=60)
                                                            CTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCGGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTT                                    <  SRR4302540.7783102/94‑1 (MQ=60)
                                                             TGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTT                                   >  SRR4302540.6525241/1‑94 (MQ=60)
                                                             TGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTT                                   <  SRR4302540.7196612/94‑1 (MQ=60)
                                                             TGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTT                                   <  SRR4302540.3463085/94‑1 (MQ=60)
                                                              GGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTT                                  >  SRR4302540.7578594/1‑94 (MQ=60)
                                                              GGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTC                                  <  SRR4302540.5620180/94‑1 (MQ=60)
                                                              GGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTC                                  <  SRR4302540.932110/94‑1 (MQ=60)
                                                               GCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCT                                 <  SRR4302540.4615114/94‑1 (MQ=60)
                                                                 TGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGC                               <  SRR4302540.9528828/94‑1 (MQ=60)
                                                                 TGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGC                               <  SRR4302540.8419827/94‑1 (MQ=60)
                                                                 TGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGC                               <  SRR4302540.5632593/94‑1 (MQ=60)
                                                                 TGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGC                               >  SRR4302540.6914239/1‑94 (MQ=60)
                                                                  GCATACGCTGATTATGGTGGGCGGTGGGCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGGGGTGCACTGAAAAAAGAGGggggttttgcc                              >  SRR4302540.7050525/1‑83 (MQ=60)
                                                                  GCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAACAGAGGCGGTTTCTGCG                              >  SRR4302540.4058325/1‑94 (MQ=60)
                                                                  GCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCA                              >  SRR4302540.8324921/1‑94 (MQ=60)
                                                                  GCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCA                              >  SRR4302540.5760569/1‑94 (MQ=60)
                                                                  GCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCA                              <  SRR4302540.6184011/94‑1 (MQ=60)
                                                                  GCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACCGAAAAAAGAGcacgtttagtaa                              >  SRR4302540.4058324/1‑82 (MQ=60)
                                                                   CATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAC                             >  SRR4302540.6180748/1‑94 (MQ=60)
                                                                    ATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACC                            >  SRR4302540.7316326/1‑94 (MQ=60)
                                                                    ATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACC                            >  SRR4302540.4364737/1‑94 (MQ=60)
                                                                    ATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACC                            >  SRR4302540.5965139/1‑94 (MQ=60)
                                                                     TACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCT                           >  SRR4302540.3406844/1‑94 (MQ=60)
                                                                      ACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTG                          <  SRR4302540.481760/94‑1 (MQ=60)
                                                                      ACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTG                          <  SRR4302540.6608882/94‑1 (MQ=60)
                                                                        GCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCG                        >  SRR4302540.4352295/1‑94 (MQ=60)
                                                                        GCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCG                        <  SRR4302540.1758983/94‑1 (MQ=60)
                                                                        GCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCG                        >  SRR4302540.5452377/1‑94 (MQ=60)
                                                                        GCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCG                        <  SRR4302540.2397371/94‑1 (MQ=60)
                                                                        GCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCG                        >  SRR4302540.7959317/1‑94 (MQ=60)
                                                                         CTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGC                       >  SRR4302540.4565006/1‑94 (MQ=60)
                                                                          TGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCC                      >  SRR4302540.7460076/1‑94 (MQ=60)
                                                                          TGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCC                      >  SRR4302540.7104579/1‑94 (MQ=60)
                                                                          TGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCC                      >  SRR4302540.4768111/1‑94 (MQ=60)
                                                                          TGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCC                      <  SRR4302540.8078765/94‑1 (MQ=60)
                                                                           GATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAACAACGAGGCGGTTTCTGCACCTGgccca                     >  SRR4302540.8908036/1‑89 (MQ=60)
                                                                           GATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     <  SRR4302540.2043610/94‑1 (MQ=60)
                                                                           GATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     >  SRR4302540.9604952/1‑94 (MQ=60)
                                                                           GATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     >  SRR4302540.8908035/1‑94 (MQ=60)
                                                                           GATTATGGGGTGCGGTGGCCTGGATCTCTGCTGGATTGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     <  SRR4302540.2043611/94‑1 (MQ=60)
                                                                            ATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCAC                    >  SRR4302540.9416979/1‑94 (MQ=60)
                                                                             TTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGACAATCGACGCGGTCTCTGCACCTGCGCCCCA                   >  SRR4302540.5266530/1‑94 (MQ=60)
                                                                             TTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACA                   >  SRR4302540.6572087/1‑94 (MQ=60)
                                                                              TATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAG                  <  SRR4302540.6278050/94‑1 (MQ=60)
                                                                               ATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGG                 <  SRR4302540.7108719/94‑1 (MQ=60)
                                                                               ATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGG                 >  SRR4302540.7105372/1‑94 (MQ=60)
                                                                                TGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGT                >  SRR4302540.5522381/1‑94 (MQ=60)
                                                                                 GGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGGC               >  SRR4302540.3833479/1‑94 (MQ=60)
                                                                                    GGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAG            >  SRR4302540.9812653/1‑94 (MQ=60)
                                                                                    GGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAG            <  SRR4302540.775684/94‑1 (MQ=60)
                                                                                    GGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAG            >  SRR4302540.9450148/1‑94 (MQ=60)
                                                                                    GGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGACACAGGTCGAG            <  SRR4302540.6527308/94‑1 (MQ=60)
                                                                                     GGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGC           <  SRR4302540.995960/94‑1 (MQ=60)
                                                                                     GGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGC           <  SRR4302540.10153127/94‑1 (MQ=60)
                                                                                      GCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT          <  SRR4302540.4609003/94‑1 (MQ=60)
                                                                                      GCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT          >  SRR4302540.7461823/1‑94 (MQ=60)
                                                                                      GCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT          <  SRR4302540.8944487/94‑1 (MQ=60)
                                                                                      GCGGTGGCCTGTATCCCTGCTGGATGGGTTACCAGATGCTACGTCGTGCACTCAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT          <  SRR4302540.1588123/94‑1 (MQ=60)
                                                                                       CGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG         >  SRR4302540.8345547/1‑94 (MQ=60)
                                                                                       CGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG         <  SRR4302540.816356/94‑1 (MQ=60)
                                                                                       CGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG         <  SRR4302540.1231582/94‑1 (MQ=60)
                                                                                        GGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        >  SRR4302540.8648778/1‑94 (MQ=60)
                                                                                        GGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        >  SRR4302540.1010379/1‑94 (MQ=60)
                                                                                        GGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        <  SRR4302540.6676135/94‑1 (MQ=60)
                                                                                        GGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        <  SRR4302540.7818478/94‑1 (MQ=60)
                                                                                        GGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        >  SRR4302540.7955726/1‑94 (MQ=60)
                                                                                        GGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        >  SRR4302540.2883067/1‑94 (MQ=60)
                                                                                        GGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        <  SRR4302540.4752850/94‑1 (MQ=60)
                                                                                         GTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC       >  SRR4302540.29074/1‑94 (MQ=60)
                                                                                         GTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC       <  SRR4302540.7801428/94‑1 (MQ=60)
                                                                                         GTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC       <  SRR4302540.9163582/94‑1 (MQ=60)
                                                                                         GTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC       >  SRR4302540.3252062/1‑94 (MQ=60)
                                                                                         GTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC       <  SRR4302540.3910221/94‑1 (MQ=60)
                                                                                           TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCG      >  SRR4302540.9831441/1‑94 (MQ=60)
                                                                                             GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAA    >  SRR4302540.7878467/1‑94 (MQ=60)
                                                                                              ggcCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGA     >  SRR4302540.632534/4‑94 (MQ=60)
                                                                                                 CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  <  SRR4302540.563041/94‑1 (MQ=60)
                                                                                                 CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  SRR4302540.2382808/1‑94 (MQ=60)
                                                                                                 CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  SRR4302540.308704/1‑94 (MQ=60)
                                                                                                 CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  <  SRR4302540.5559435/94‑1 (MQ=60)
                                                                                                 CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  SRR4302540.7008880/1‑94 (MQ=60)
                                                                                                 CTGTATCTCTGCTGGATGGGCTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGGTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  SRR4302540.6306440/1‑94 (MQ=60)
                                                                                                 |                                                                                             
CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  NC_000913/4005508‑4005694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: