Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,075,942	T→C	V305A (GTG→GCG)	yiiD →	putative acetyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,075,942	0	T	C	93.5%	948.0 / 40.0	343	V305A (GTG→GCG)	yiiD	putative acetyltransferase
Reads supporting (aligned to +/- strand): ref base T (7/15); new base C (115/204); total (123/220)
Fisher's exact test for biased strand distribution p-value = 8.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.75e-01

Only 100 of 362 total aligned reads displayed.

TTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGG  >  NC_000913/4075851‑4076032

ttAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAgtg                                                                                           <  1:4469911/93‑1 (MQ=255)

 tAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAgcgt                                                                                          <  2:946491/93‑1 (MQ=255)

 tAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAgcgt                                                                                          >  1:9402020/1‑93 (MQ=255)

   aGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGATACGCCGGGTGCAGCGttt                                                                                        <  2:8682507/93‑1 (MQ=255)

     cggcgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGa                                                                                      <  1:8623418/93‑1 (MQ=255)

     cggcgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGa                                                                                      <  1:5218426/93‑1 (MQ=255)

     cggcgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGa                                                                                      <  2:7568689/93‑1 (MQ=255)

       gcgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAg                                                                                    <  1:9056781/93‑1 (MQ=255)

        ggATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAgg                                                                                   <  1:3509740/92‑1 (MQ=255)

        cgATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAgg                                                                                   >  1:1053469/1‑93 (MQ=255)

          aTCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCa                                                                                 >  2:7904520/1‑93 (MQ=255)

          aTCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCa                                                                                 <  2:7123152/93‑1 (MQ=255)

          aTCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCa                                                                                 <  1:1724565/93‑1 (MQ=255)

          aTCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCa                                                                                 >  2:3999945/1‑93 (MQ=255)

           tctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCAc                                                                                >  2:8800061/1‑93 (MQ=255)

           tctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCAc                                                                                <  2:3329390/93‑1 (MQ=255)

           tctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCAc                                                                                <  1:2037682/93‑1 (MQ=255)

           tctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTATGAAGGCAc                                                                                >  1:9655176/1‑93 (MQ=255)

            ctcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACg                                                                               <  2:6951557/93‑1 (MQ=255)

             tcGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGt                                                                              <  2:7666137/93‑1 (MQ=255)

               gACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGtat                                                                            <  1:3216313/93‑1 (MQ=255)

                aCCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGtata                                                                           >  1:8027759/1‑93 (MQ=255)

                   gTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCg                                                                        <  1:1219740/93‑1 (MQ=255)

                   gTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCg                                                                        <  1:2869531/93‑1 (MQ=255)

                    tCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGaa                                                                                     >  1:1180104/1‑79 (MQ=255)

                    tCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGaa                                                                                     <  2:1180104/79‑1 (MQ=255)

                    tCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGt                                                                       <  2:1522914/93‑1 (MQ=255)

                    tCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGt                                                                       >  2:4271198/1‑93 (MQ=255)

                      tGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTc                                                                     <  1:6811748/93‑1 (MQ=255)

                       tgcgcgcGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCGTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCt                                                                    <  1:2559306/92‑1 (MQ=255)

                       ggCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGTGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCt                                                                    <  2:6101612/93‑1 (MQ=255)

                        gcgcgcGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTg                                                                   >  1:1351984/1‑93 (MQ=255)

                          gcgcgGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGcc                                                                 <  1:7078059/93‑1 (MQ=255)

                             cgGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCcgt                                                              >  1:6079198/1‑92 (MQ=255)

                             cgGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCcgc                                                              <  1:2639927/93‑1 (MQ=255)

                              ggACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCcgcg                                                             >  1:8837276/1‑93 (MQ=255)

                                aCGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGaa                                                           >  1:7858935/1‑93 (MQ=255)

                                  gAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGc                                                         <  1:6353245/93‑1 (MQ=255)

                                  gAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGc                                                         <  2:8464416/93‑1 (MQ=255)

                                   aaaaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGcc                                                        >  2:2898491/1‑93 (MQ=255)

                                    aaaGCAGGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCa                                                       <  1:234538/93‑1 (MQ=255)

                                    aaaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATTGTTCTGCCCGCGAAGCCa                                                       <  2:8084837/93‑1 (MQ=255)

                                    aaaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCa                                                       >  2:2366915/1‑93 (MQ=255)

                                     aaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAt                                                      <  2:4385915/93‑1 (MQ=255)

                                     aaGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAt                                                      >  2:3427716/1‑93 (MQ=255)

                                      aGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCCTTCTGCCCGCGAAGCCAtt                                                     <  1:6441041/93‑1 (MQ=255)

                                      aGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAtt                                                     <  1:9837055/93‑1 (MQ=255)

                                      aGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAtt                                                     <  1:6524785/93‑1 (MQ=255)

                                       gCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAttt                                                    <  2:3555958/93‑1 (MQ=255)

                                       gCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAttt                                                    >  1:7927499/1‑93 (MQ=255)

                                       gCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAttt                                                    <  2:2612253/93‑1 (MQ=255)

                                         aCGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTgg                                                  >  2:6643443/1‑93 (MQ=255)

                                         aCGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTgg                                                  >  1:4612944/1‑93 (MQ=255)

                                          cGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGc                                                 >  1:7725864/1‑93 (MQ=255)

                                          cGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGc                                                 <  1:5372084/93‑1 (MQ=255)

                                            ggTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGccc                                               <  1:3993520/93‑1 (MQ=255)

                                             gTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCg                                              <  1:8217591/93‑1 (MQ=255)

                                             gTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGAACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCg                                              >  1:6909020/1‑93 (MQ=255)

                                               gCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTa                                            <  2:2807660/93‑1 (MQ=255)

                                               gCAGACGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTa                                            <  2:2138471/93‑1 (MQ=255)

                                                cAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTAt                                           <  1:9314835/93‑1 (MQ=255)

                                                 aGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATg                                          <  1:7611400/93‑1 (MQ=255)

                                                 aGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATg                                          <  2:4804161/93‑1 (MQ=255)

                                                  gATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGa                                         >  1:10002134/1‑93 (MQ=255)

                                                   aTGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGaa                                        <  2:5097665/93‑1 (MQ=255)

                                                    tGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAag                                       <  2:904829/93‑1 (MQ=255)

                                                    tGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAag                                       <  1:4166115/93‑1 (MQ=255)

                                                    tGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAag                                       >  1:5067696/1‑93 (MQ=255)

                                                     gCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAaga                                      <  1:5673373/93‑1 (MQ=255)

                                                      cAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAagag                                     <  1:5839497/93‑1 (MQ=255)

                                                        ggTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAggg                                   >  1:4952191/1‑93 (MQ=255)

                                                         gTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGc                                  >  2:5774243/1‑93 (MQ=255)

                                                           cGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCgg                                <  2:8239114/93‑1 (MQ=255)

                                                           cGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCgg                                >  2:5306319/1‑93 (MQ=255)

                                                             aaaTCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGa                              >  2:3044486/1‑93 (MQ=255)

                                                             aaaGCTTGGGCGACGAGACGTCGTGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGGATGAAGAGGGCGGGa                              <  2:4201370/93‑1 (MQ=255)

                                                              aaTCTTTGGCGACGAGACGCCGGTTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGaa                             <  2:6874153/93‑1 (MQ=255)

                                                              aaTCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGaa                             <  2:1237089/93‑1 (MQ=255)

                                                                 cTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACga                          >  2:5958255/1‑93 (MQ=255)

                                                                  tgtGGCGACGTGCCGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACgaa                         <  1:7129270/91‑1 (MQ=255)

                                                                   ttGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACgaag                        >  2:3864241/1‑93 (MQ=255)

                                                                     ggCGACGAGACGCCGGGTGAAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACgaagaa                      <  1:8433654/93‑1 (MQ=255)

                                                                      gCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGaagaag                     <  1:1879922/93‑1 (MQ=255)

                                                                       cgacgaGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAagaaga                    <  2:6292384/93‑1 (MQ=255)

                                                                        gacgaGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAagag                   <  1:7549987/93‑1 (MQ=255)

                                                                         acgaGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGt                  >  2:9712412/1‑93 (MQ=255)

                                                                         acgaGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGt                  >  1:7054635/1‑93 (MQ=255)

                                                                          cgaGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTa                 <  1:8866270/93‑1 (MQ=255)

                                                                            agaCGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGc               >  2:5489220/1‑93 (MQ=255)

                                                                             gaCGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCt              <  2:2031891/93‑1 (MQ=255)

                                                                               cGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGa            <  2:2537753/93‑1 (MQ=255)

                                                                               cGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGa            <  1:3719798/93‑1 (MQ=255)

                                                                                ggcGGGTGAAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGAt           <  2:1810109/91‑1 (MQ=255)

                                                                                gCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGAt           <  2:1609275/93‑1 (MQ=255)

                                                                                 ccGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATg          <  1:7395767/93‑1 (MQ=255)

                                                                                   gggTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGga        >  1:5424511/1‑93 (MQ=255)

                                                                                    ggTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGgag       >  2:9365854/1‑93 (MQ=255)

                                                                                     gtccAGCGTTTGAAGGCCCGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGgaga      <  1:9505714/90‑1 (MQ=255)

                                                                                       gCAGCGTTTGAAGGCTCGTATATCGTTCTGCCCGCGAAGCTATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAgg    <  1:8330863/93‑1 (MQ=255)

                                                                                        cAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAggg   <  1:4344274/93‑1 (MQ=255)

TTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGG  >  NC_000913/4075851‑4076032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 210 total aligned reads displayed.

CTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGG  >  NC_000913/4075850‑4076035

CTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCG                                                                                              >  SRR4302540.698751/1‑94 (MQ=60)

CTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCG                                                                                              >  SRR4302540.7803432/1‑94 (MQ=60)

CTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCG                                                                                              >  SRR4302540.8120747/1‑94 (MQ=60)

CTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCG                                                                                              >  SRR4302540.8640748/1‑94 (MQ=60)

 TTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGT                                                                                             <  SRR4302540.8951428/94‑1 (MQ=60)

 TTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGT                                                                                             <  SRR4302540.4518378/94‑1 (MQ=60)

 TTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGT                                                                                             >  SRR4302540.4148566/1‑94 (MQ=60)

 TTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGT                                                                                             >  SRR4302540.9513864/1‑94 (MQ=60)

  TAAGCGGCGATCTCGACCGTCTGGCGCGCGTACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTT                                                                                            <  SRR4302540.8689069/94‑1 (MQ=60)

   AAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTT                                                                                           <  SRR4302540.3823663/94‑1 (MQ=60)

    AGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTG                                                                                          <  SRR4302540.7740377/94‑1 (MQ=60)

     GCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGA                                                                                         <  SRR4302540.7658086/94‑1 (MQ=60)

      CGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAA                                                                                        <  SRR4302540.5275316/94‑1 (MQ=60)

      CGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAA                                                                                        <  SRR4302540.8723590/94‑1 (MQ=60)

        GCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGG                                                                                      <  SRR4302540.9165510/94‑1 (MQ=60)

        GCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGG                                                                                      <  SRR4302540.8750237/94‑1 (MQ=60)

        GCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGG                                                                                      >  SRR4302540.1064191/1‑94 (MQ=60)

         GGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGC                                                                                     <  SRR4302540.3547967/94‑1 (MQ=60)

          GATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCA                                                                                    >  SRR4302540.1210337/1‑94 (MQ=60)

          GATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCA                                                                                    >  SRR4302540.743553/1‑94 (MQ=60)

           ATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCAC                                                                                   <  SRR4302540.1743176/94‑1 (MQ=60)

           ATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCAC                                                                                   <  SRR4302540.6636487/94‑1 (MQ=60)

           ATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTATGAAGGCAC                                                                                   >  SRR4302540.9768847/1‑94 (MQ=60)

            TCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACG                                                                                  <  SRR4302540.7043651/94‑1 (MQ=60)

            TCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACG                                                                                  <  SRR4302540.2059648/94‑1 (MQ=60)

              TCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTA                                                                                <  SRR4302540.6080960/94‑1 (MQ=60)

               CGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTAT                                                                               <  SRR4302540.2053575/94‑1 (MQ=60)

                gaccgactagaaCGCGGACGACAAGCACGAGTGCAGAAGCAGGTCGAAATCTTTGGCAACGAGACGCAAGATGCAGCGTTTGAAGGCACGTATA                                                                              <  SRR4302540.9030365/82‑1 (MQ=43)

                GACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATA                                                                              >  SRR4302540.8121112/1‑94 (MQ=60)

                GACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATA                                                                              <  SRR4302540.3251242/94‑1 (MQ=60)

                 ACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATAT                                                                             <  SRR4302540.7207230/94‑1 (MQ=60)

                   CGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCG                                                                           >  SRR4302540.5470929/1‑94 (MQ=60)

                   CGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCG                                                                           <  SRR4302540.6985219/94‑1 (MQ=60)

                   CGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCG                                                                           >  SRR4302540.1912170/1‑94 (MQ=60)

                    GTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGaagcgctagatcg                                                                          >  SRR4302540.1192293/1‑81 (MQ=60)

                    GTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGT                                                                          <  SRR4302540.8166412/94‑1 (MQ=60)

                    GTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGT                                                                          <  SRR4302540.1232222/94‑1 (MQ=60)

                     TCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTT                                                                         <  SRR4302540.3574915/94‑1 (MQ=60)

                     TCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTT                                                                         <  SRR4302540.7745392/94‑1 (MQ=60)

                     TCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTT                                                                         <  SRR4302540.3311146/94‑1 (MQ=60)

                      CTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTC                                                                        >  SRR4302540.2390763/1‑94 (MQ=60)

                      CTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTC                                                                        <  SRR4302540.5851821/94‑1 (MQ=60)

                      CTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTC                                                                        >  SRR4302540.8952192/1‑94 (MQ=60)

                       TGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCT                                                                       <  SRR4302540.1877507/94‑1 (MQ=60)

                       TGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCT                                                                       >  SRR4302540.525665/1‑94 (MQ=60)

                       TGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCT                                                                       <  SRR4302540.8548580/94‑1 (MQ=60)

                       TGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCT                                                                       >  SRR4302540.5589678/1‑94 (MQ=60)

                       TGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCT                                                                       <  SRR4302540.5569204/94‑1 (MQ=60)

                       TGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCT                                                                       <  SRR4302540.6887114/94‑1 (MQ=60)

                       TGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCT                                                                       <  SRR4302540.6887115/94‑1 (MQ=60)

                       TGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCT                                                                       <  SRR4302540.9275404/94‑1 (MQ=60)

                        tgcggaCGGACGAACAACACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACAAGACGCCGGGTGCAGCGTTTGAAGGCATGTATATCGTTCTG                                                                      <  SRR4302540.5396217/88‑1 (MQ=60)

                        TGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCGTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTG                                                                      <  SRR4302540.2586893/94‑1 (MQ=60)

                        GGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTG                                                                      >  SRR4302540.1366203/1‑94 (MQ=60)

                        GGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTG                                                                      <  SRR4302540.5396216/94‑1 (MQ=60)

                        GGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTG                                                                      <  SRR4302540.510899/94‑1 (MQ=60)

                        GGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTG                                                                      <  SRR4302540.2586896/94‑1 (MQ=60)

                        GGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTG                                                                      <  SRR4302540.9298427/94‑1 (MQ=60)

                        GGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTG                                                                      >  SRR4302540.7978920/1‑94 (MQ=60)

                           GCGCGGACGACAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCC                                                                   <  SRR4302540.4284196/94‑1 (MQ=60)

                           GCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCC                                                                   <  SRR4302540.7156826/94‑1 (MQ=60)

                            CGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCG                                                                  <  SRR4302540.5201962/94‑1 (MQ=60)

                            CGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCG                                                                  >  SRR4302540.6127196/1‑94 (MQ=60)

                            CGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCG                                                                  <  SRR4302540.9475142/94‑1 (MQ=60)

                             GCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGT                                                                 >  SRR4302540.6146796/1‑94 (MQ=60)

                             GCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGC                                                                 >  SRR4302540.3543655/1‑94 (MQ=60)

                              CGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCG                                                                <  SRR4302540.2668533/94‑1 (MQ=60)

                              CGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCG                                                                >  SRR4302540.8939489/1‑94 (MQ=60)

                               GGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGA                                                               >  SRR4302540.1404454/1‑94 (MQ=60)

                                GACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAA                                                              <  SRR4302540.977536/94‑1 (MQ=60)

                                GACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAA                                                              >  SRR4302540.7950763/1‑94 (MQ=60)

                                 ACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAG                                                             >  SRR4302540.7271814/1‑94 (MQ=60)

                                 ACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTGGAAGGCACGTATATCGTTCTGCCCGCGAAG                                                             <  SRR4302540.4583725/94‑1 (MQ=60)

                                   GAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCC                                                           <  SRR4302540.6423997/94‑1 (MQ=60)

                                    AAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCA                                                          >  SRR4302540.5035608/1‑94 (MQ=60)

                                     AAAGCAGGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAT                                                         <  SRR4302540.236809/94‑1 (MQ=60)

                                     AAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAT                                                         >  SRR4302540.6308638/1‑94 (MQ=60)

                                     AAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCAT                                                         <  SRR4302540.1174203/94‑1 (MQ=60)

                                      AAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATT                                                        <  SRR4302540.1335448/94‑1 (MQ=60)

                                       AGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCCTTCTGCCCGCGAAGCCATTT                                                       <  SRR4302540.6512730/94‑1 (MQ=60)

                                       AGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTT                                                       <  SRR4302540.7413901/94‑1 (MQ=60)

                                       AGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTT                                                       >  SRR4302540.8019893/1‑94 (MQ=60)

                                       AGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTT                                                       <  SRR4302540.6597252/94‑1 (MQ=60)

                                        GCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTG                                                      <  SRR4302540.5526987/94‑1 (MQ=60)

                                        GCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTG                                                      <  SRR4302540.8380749/94‑1 (MQ=60)

                                        GCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTG                                                      <  SRR4302540.5477129/94‑1 (MQ=60)

                                         CACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGG                                                     <  SRR4302540.9747801/94‑1 (MQ=60)

                                         CACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGG                                                     >  SRR4302540.4662444/1‑94 (MQ=60)

                                         CACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGG                                                     <  SRR4302540.4510973/94‑1 (MQ=60)

                                          ACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGC                                                    >  SRR4302540.7816046/1‑94 (MQ=60)

                                          ACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTACAGCGTTTGAAGGCACGTCTCTCGGTCTGCCCGCGAAGCactttgcc                                                    >  SRR4302540.7816047/1‑86 (MQ=60)

                                          ACGGGGGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGAGTTTGAAGGAACGTATATCGTTCTGCCCGCGACGCCATTTGGC                                                    >  SRR4302540.892327/1‑94 (MQ=60)

                                           CGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCC                                                   >  SRR4302540.8472399/1‑94 (MQ=60)

                                           CGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCC                                                   >  SRR4302540.5283726/1‑94 (MQ=60)

                                           CGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCC                                                   <  SRR4302540.5431137/94‑1 (MQ=60)

                                            GGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGAGTCTGAAGGCACGTCTATCGTTCTGCACGCGAAACCATTTGGCCC                                                  <  SRR4302540.1114945/94‑1 (MQ=60)

                                             GGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCG                                                 <  SRR4302540.4036498/94‑1 (MQ=60)

                                             GGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCG                                                 >  SRR4302540.6985876/1‑94 (MQ=60)

                                             GGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGAACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCG                                                 >  SRR4302540.6985877/1‑94 (MQ=60)

                                              GTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGT                                                <  SRR4302540.8313103/94‑1 (MQ=60)

                                              GTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGT                                                >  SRR4302540.9763812/1‑94 (MQ=60)

                                              GTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGT                                                >  SRR4302540.2603444/1‑94 (MQ=60)

                                                GCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTAT                                              <  SRR4302540.5019467/94‑1 (MQ=60)

                                                GCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTAT                                              <  SRR4302540.4308540/94‑1 (MQ=60)

                                                GCAGAGGCAGGTGGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTAT                                              <  SRR4302540.9010260/94‑1 (MQ=60)

                                                 CAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATG                                             <  SRR4302540.4694567/94‑1 (MQ=60)

                                                 CAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATG                                             <  SRR4302540.8730575/94‑1 (MQ=60)

                                                 CAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATG                                             <  SRR4302540.9426004/94‑1 (MQ=60)

                                                  AGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGA                                            >  SRR4302540.10118649/1‑94 (MQ=60)

                                                  AGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGA                                            <  SRR4302540.7696947/94‑1 (MQ=60)

                                                  AGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGA                                            <  SRR4302540.6495390/94‑1 (MQ=60)

                                                  AGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGA                                            <  SRR4302540.4145543/94‑1 (MQ=60)

                                                  AGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGA                                            >  SRR4302540.3380771/1‑94 (MQ=60)

                                                   gattgaaGTCGAAATATTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAA                                           <  SRR4302540.6885301/87‑1 (MQ=60)

                                                   GATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTTTGAA                                           <  SRR4302540.2547550/94‑1 (MQ=60)

                                                   GATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAA                                           >  SRR4302540.9469473/1‑94 (MQ=60)

                                                    ATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAG                                          >  SRR4302540.5122489/1‑94 (MQ=60)

                                                    ATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAG                                          <  SRR4302540.7156008/94‑1 (MQ=60)

                                                     TGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGA                                         >  SRR4302540.6460941/1‑94 (MQ=60)

                                                     TGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGA                                         <  SRR4302540.4211283/94‑1 (MQ=60)

                                                     TGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGA                                         <  SRR4302540.8788420/94‑1 (MQ=60)

                                                     TGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGA                                         <  SRR4302540.9845722/94‑1 (MQ=60)

                                                      GCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAG                                        <  SRR4302540.9881202/94‑1 (MQ=60)

                                                      GCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAG                                        <  SRR4302540.3556004/94‑1 (MQ=60)

                                                      GCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAG                                        <  SRR4302540.5735846/94‑1 (MQ=60)

                                                      GCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAG                                        <  SRR4302540.5735845/94‑1 (MQ=60)

                                                      GCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAG                                        <  SRR4302540.5735844/94‑1 (MQ=60)

                                                       CAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAGGCCATTTGGCCCGTATGAAGAGG                                       <  SRR4302540.7116744/94‑1 (MQ=60)

                                                       CAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGG                                       <  SRR4302540.5904069/94‑1 (MQ=60)

                                                        AGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGG                                      >  SRR4302540.5005692/1‑94 (MQ=60)

                                                        AGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGG                                      >  SRR4302540.8081676/1‑94 (MQ=60)

                                                        AGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGG                                      >  SRR4302540.4788657/1‑94 (MQ=60)

                                                        AGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGG                                      <  SRR4302540.9597518/94‑1 (MQ=60)

                                                         GGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGC                                     <  SRR4302540.1202199/94‑1 (MQ=60)

                                                         GGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGC                                     >  SRR4302540.7572445/1‑94 (MQ=60)

                                                         GGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGC                                     >  SRR4302540.1291183/1‑94 (MQ=60)

                                                         GGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGC                                     <  SRR4302540.9157871/94‑1 (MQ=60)

                                                         GGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGC                                     >  SRR4302540.8490510/1‑94 (MQ=60)

                                                          GTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCG                                    <  SRR4302540.4691041/94‑1 (MQ=60)

                                                          GTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCG                                    >  SRR4302540.8355236/1‑94 (MQ=60)

                                                          GTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCG                                    >  SRR4302540.1974572/1‑94 (MQ=60)

                                                          GTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCG                                    <  SRR4302540.7152967/94‑1 (MQ=60)

                                                          GTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCG                                    <  SRR4302540.7152966/94‑1 (MQ=60)

                                                          GTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCG                                    <  SRR4302540.7485479/94‑1 (MQ=60)

                                                           TCGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGG                                   <  SRR4302540.6150419/94‑1 (MQ=60)

                                                           TCGAAATCTTTGGCGACAAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGG                                   <  SRR4302540.2668077/94‑1 (MQ=60)

                                                            CGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGG                                  >  SRR4302540.2837825/1‑94 (MQ=60)

                                                            CGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGG                                  >  SRR4302540.2194348/1‑94 (MQ=60)

                                                            CGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGG                                  <  SRR4302540.9604700/94‑1 (MQ=60)

                                                            CGAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGG                                  <  SRR4302540.2465738/94‑1 (MQ=60)

                                                             GAAATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGA                                 >  SRR4302540.7105444/1‑94 (MQ=60)

                                                               AATCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGCATATCGTTGTGCCCGCGAAGCCATTTGGCCCGTATGAAGCGGGCGGGAGC                               >  SRR4302540.3234217/1‑94 (MQ=60)

                                                                ATCTTTGGCGACGAGACGCCGGGGGCAGCGTTTGAAGGCACGTATATCGTTCTGCTCGCGCAGCCATTTGGCCCGCATGAAGAGGGCGGGAACG                              >  SRR4302540.1402736/1‑94 (MQ=60)

                                                                 TCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCTCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGA                             >  SRR4302540.3218895/1‑94 (MQ=60)

                                                                 TCTTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGA                             <  SRR4302540.3864516/94‑1 (MQ=60)

                                                                   TTTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAG                           <  SRR4302540.7996710/94‑1 (MQ=60)

                                                                   TGTGGCGACGTGCCGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAG                           <  SRR4302540.7208683/94‑1 (MQ=60)

                                                                    TTGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGA                          <  SRR4302540.6571793/94‑1 (MQ=60)

                                                                     TGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAA                         <  SRR4302540.4521286/94‑1 (MQ=60)

                                                                     TGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAA                         <  SRR4302540.8004662/94‑1 (MQ=60)

                                                                     TGGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAA                         <  SRR4302540.6514867/94‑1 (MQ=60)

                                                                      GGCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAG                        >  SRR4302540.9221846/1‑94 (MQ=60)

                                                                      GGCGACGAGACGCCGGGTGAAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAG                        <  SRR4302540.8531563/94‑1 (MQ=60)

                                                                       GCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGA                       <  SRR4302540.10144904/94‑1 (MQ=60)

                                                                       GCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGA                       <  SRR4302540.7179568/94‑1 (MQ=60)

                                                                       GCGACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGA                       <  SRR4302540.1900510/94‑1 (MQ=60)

                                                                         GACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGT                     <  SRR4302540.7634614/94‑1 (MQ=60)

                                                                         GACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGT                     <  SRR4302540.6664355/94‑1 (MQ=60)

                                                                          ACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTA                    >  SRR4302540.8149081/1‑94 (MQ=60)

                                                                          ACGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTA                    >  SRR4302540.2725919/1‑94 (MQ=60)

                                                                           CGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAG                   <  SRR4302540.8968869/94‑1 (MQ=60)

                                                                           CGAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAG                   <  SRR4302540.1456695/94‑1 (MQ=60)

                                                                            GAGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGC                  >  SRR4302540.8037254/1‑94 (MQ=60)

                                                                             AGACGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCT                 >  SRR4302540.1109882/1‑94 (MQ=60)

                                                                               ACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGA               <  SRR4302540.1013057/94‑1 (MQ=60)

                                                                                CGCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGAT              <  SRR4302540.3760384/94‑1 (MQ=60)

                                                                                 GCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATG             >  SRR4302540.1327380/1‑94 (MQ=60)

                                                                                 GCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATG             <  SRR4302540.659188/94‑1 (MQ=60)

                                                                                 GCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATG             >  SRR4302540.9554758/1‑94 (MQ=60)

                                                                                 GCCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTACCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATG             <  SRR4302540.7873904/94‑1 (MQ=60)

                                                                                  CCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGG            >  SRR4302540.4443860/1‑94 (MQ=60)

                                                                                  CCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGG            <  SRR4302540.7478170/94‑1 (MQ=60)

                                                                                  CCGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGG            >  SRR4302540.4443859/1‑94 (MQ=60)

                                                                                   CGGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGA           >  SRR4302540.5484163/1‑94 (MQ=60)

                                                                                    GGGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAG          >  SRR4302540.3899672/1‑94 (MQ=60)

                                                                                    GGGTGCAGCGTGTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAG          <  SRR4302540.8101466/94‑1 (MQ=60)

                                                                                     GGTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGA         <  SRR4302540.1610114/94‑1 (MQ=60)

                                                                                      GTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAG        <  SRR4302540.7668684/94‑1 (MQ=60)

                                                                                      GTGCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAG        <  SRR4302540.7662441/94‑1 (MQ=60)

                                                                                      GTCCAGCGTTTGAAGGCCCGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAG        <  SRR4302540.9618338/94‑1 (MQ=60)

                                                                                        GCAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGG      <  SRR4302540.8427561/94‑1 (MQ=60)

                                                                                         CAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGG     <  SRR4302540.4391558/94‑1 (MQ=60)

                                                                                         CAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGG     <  SRR4302540.2261462/94‑1 (MQ=60)

                                                                                         CAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGG     <  SRR4302540.3139633/94‑1 (MQ=60)

                                                                                         CAGCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGG     >  SRR4302540.8955116/1‑94 (MQ=60)

                                                                                          AGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGG    >  SRR4302540.8634986/1‑94 (MQ=60)

                                                                                           GCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCG   <  SRR4302540.6274772/94‑1 (MQ=60)

                                                                                           GCGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCG   >  SRR4302540.86904/1‑94 (MQ=60)

                                                                                            TGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGG  >  SRR4302540.9144649/1‑94 (MQ=60)

                                                                                            CGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGG  <  SRR4302540.2795259/94‑1 (MQ=60)

CTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAGCTGATGGAGAGGGGCGG  >  NC_000913/4075850‑4076035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`