Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,356,994	C→T	A206T (GCA→ACA)	cadB ←	transport of lysine/cadaverine

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,356,994	0	C	T	99.8%	1731.0 / ‑6.2	479	A206T (GCA→ACA)	cadB	transport of lysine/cadaverine
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (231/246); total (231/248)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01

Only 100 of 487 total aligned reads displayed.

TGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGCGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAG  >  NC_000913/4356904‑4357083

tGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTgg                                                                                         >  2:6906872/1‑93 (MQ=255)

 gTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGa                                                                                        <  1:5985525/93‑1 (MQ=255)

 gTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGa                                                                                        <  2:7131827/93‑1 (MQ=255)

   aaaCAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGAtt                                                                                      <  2:456705/93‑1 (MQ=255)

   aaaCAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGAtt                                                                                      >  1:5492019/1‑93 (MQ=255)

   aaaCAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGAtt                                                                                      >  1:382614/1‑93 (MQ=255)

    aaCAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTc                                                                                     >  1:716953/1‑93 (MQ=255)

     aCAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCa                                                                                    >  1:1484945/1‑93 (MQ=255)

     aCAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCa                                                                                    >  2:9193029/1‑93 (MQ=255)

      cAATCCCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCaa                                                                                   <  1:9891812/93‑1 (MQ=255)

        aTACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAaca                                                                                 >  2:1015532/1‑93 (MQ=255)

        aTACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAaca                                                                                 <  2:5309675/93‑1 (MQ=255)

        aTAACTGCTAAAACAGTAACCAGCATGGTTGCCAGCGGGACGGGACGGTTCGGGGTTTTTAACATAACAGTACTT‑ACAACTGTGGGTTTaaaa                                                                                 >  2:6286792/1‑91 (MQ=255)

           ccTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACAccc                                                                              <  1:6355244/93‑1 (MQ=255)

            cTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCa                                                                             <  2:5608331/93‑1 (MQ=255)

             tGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCAc                                                                            >  1:1885791/1‑93 (MQ=255)

             tGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCAc                                                                            <  1:5058037/93‑1 (MQ=255)

             tGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCAc                                                                            >  1:2505114/1‑93 (MQ=255)

             tGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCAc                                                                            >  1:2589909/1‑93 (MQ=255)

              gCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACg                                                                           >  2:551971/1‑93 (MQ=255)

               cTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGa                                                                          >  1:1202073/1‑93 (MQ=255)

               cTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGa                                                                          >  1:7060994/1‑93 (MQ=255)

                tAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGaa                                                                         <  1:9572485/93‑1 (MQ=255)

                tAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGaa                                                                         <  2:5184691/93‑1 (MQ=255)

                tAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGaa                                                                         <  2:7452637/93‑1 (MQ=255)

                 aaaCCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAg                                                                        >  1:3445294/1‑93 (MQ=255)

                 aaaCCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAg                                                                        <  1:1623947/93‑1 (MQ=255)

                  aaCCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCCCGAAgg                                                                       <  1:3288230/93‑1 (MQ=255)

                  aaCCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAgg                                                                       >  1:9064409/1‑93 (MQ=255)

                   aCCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGc                                                                      >  1:4930592/1‑93 (MQ=255)

                    ccAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGcc                                                                     <  2:9061094/93‑1 (MQ=255)

                    ccAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGcc                                                                     >  2:7898881/1‑93 (MQ=255)

                     cAGTGCCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGccc                                                                    <  1:214306/93‑1 (MQ=255)

                       gTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCcac                                                                  <  1:9231545/93‑1 (MQ=255)

                        tACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCcaca                                                                 >  1:7399372/1‑93 (MQ=255)

                        tACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCcaca                                                                 <  1:3973770/93‑1 (MQ=255)

                        tACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCcaca                                                                 <  2:2154057/93‑1 (MQ=255)

                        tACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCcaca                                                                 <  2:3179332/93‑1 (MQ=255)

                         aCCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAg                                                                <  1:421024/93‑1 (MQ=255)

                          cccAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAgg                                                               <  2:6497638/93‑1 (MQ=255)

                          cccAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAgg                                                               <  2:1757516/93‑1 (MQ=255)

                          cccAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAgg                                                               <  2:503575/93‑1 (MQ=255)

                            cAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGgca                                                             <  2:9608690/93‑1 (MQ=255)

                            cAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGgca                                                             <  1:8937128/93‑1 (MQ=255)

                            cAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGgca                                                             <  2:8499660/93‑1 (MQ=255)

                             aGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGgcag                                                            >  2:3797235/1‑93 (MQ=255)

                               cATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGgcagag                                                          <  1:3409745/93‑1 (MQ=255)

                                aTGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGgcagagc                                                         >  2:7632087/1‑93 (MQ=255)

                                 tGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGgcagagca                                                        >  2:8850920/1‑93 (MQ=255)

                                     tGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAAt                                                    <  1:5167397/93‑1 (MQ=255)

                                      gCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATa                                                   <  1:1134274/93‑1 (MQ=255)

                                           cGGAACGGTATGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCTCAGTCAGAGCAGAATTCtttt                                              <  2:8215038/93‑1 (MQ=255)

                                            ggAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTa                                             >  1:3075011/1‑93 (MQ=255)

                                            ggAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTa                                             <  1:8480597/93‑1 (MQ=255)

                                             gAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTaa                                            <  2:2008821/93‑1 (MQ=255)

                                              aaCGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAAt                                           <  1:10019608/93‑1 (MQ=255)

                                              aaCGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAAt                                           <  2:2269166/93‑1 (MQ=255)

                                              aaCGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAAt                                           <  2:3661901/93‑1 (MQ=255)

                                               aCGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATg                                          >  2:2761586/1‑93 (MQ=255)

                                                cGGTACGTTTCGGGTTTTTAACCATACCAGTTCTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGa                                         <  1:3792326/93‑1 (MQ=255)

                                                cGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAATACCCACAAAGGCACACAGGCACAGCGGAATCTTTTTAATgt                                         >  1:7570432/1‑92 (MQ=255)

                                                cGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGa                                         <  2:1489641/93‑1 (MQ=255)

                                                cGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGa                                         <  1:9436366/93‑1 (MQ=255)

                                                cGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGa                                         <  1:275299/93‑1 (MQ=255)

                                                 ggTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGAt                                        >  2:8641853/1‑93 (MQ=255)

                                                 cgTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGAt                                        <  2:5404364/92‑1 (MQ=255)

                                                    aCGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGc                                     <  2:3964644/93‑1 (MQ=255)

                                                    aCGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGc                                     >  2:4750483/1‑93 (MQ=255)

                                                    aCGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGc                                     <  2:1129430/93‑1 (MQ=255)

                                                     cttttCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCa                                    <  2:2552548/91‑1 (MQ=255)

                                                     cGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCa                                    <  1:6868955/93‑1 (MQ=255)

                                                      gTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCAt                                   >  1:3656154/1‑93 (MQ=255)

                                                       tttCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGTATACTTTTAATGATCGCATg                                  >  1:7692214/1‑93 (MQ=255)

                                                       tttCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATg                                  >  1:6644805/1‑93 (MQ=255)

                                                        ttCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGa                                 >  2:4806637/1‑93 (MQ=255)

                                                         tCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGAc                                >  1:8820578/1‑93 (MQ=255)

                                                           gggTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCa                              >  2:5910889/1‑93 (MQ=255)

                                                           gggTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCa                              <  1:450120/93‑1 (MQ=255)

                                                            ggTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCAt                             >  1:4668646/1‑93 (MQ=255)

                                                             gTTTTTAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATc                            >  1:6461258/1‑93 (MQ=255)

                                                             gTTTTAACCCATCCCAG‑ACTTAACAGCTGTGAATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATc                            <  2:4079064/93‑1 (MQ=255)

                                                               ttttAACCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAg                          >  1:819546/1‑93 (MQ=255)

                                                                   aaCCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGt                      >  1:4350710/1‑93 (MQ=255)

                                                                   aaCCATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGt                      >  2:3460117/1‑93 (MQ=255)

                                                                      cATACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATc                   <  1:9669371/93‑1 (MQ=255)

                                                                       aTACCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATcc                  >  2:7557515/1‑93 (MQ=255)

                                                                         aCCAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGc                <  2:3910207/93‑1 (MQ=255)

                                                                          ccAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCa               >  2:9434578/1‑93 (MQ=255)

                                                                           cAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAg              >  1:8013463/1‑93 (MQ=255)

                                                                           cAGTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAg              <  2:9820852/93‑1 (MQ=255)

                                                                             gTACTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTa            >  1:7788977/1‑93 (MQ=255)

                                                                              tACTT‑ACAGCTGCGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTAt           <  2:2467564/93‑1 (MQ=255)

                                                                               aCTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTAtt          <  1:6705552/93‑1 (MQ=255)

                                                                               aCTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTAtt          <  2:1380575/93‑1 (MQ=255)

                                                                                cTT‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTc         >  2:6985267/1‑93 (MQ=255)

                                                                                 tt‑ACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTcc        >  2:4267522/1‑93 (MQ=255)

                                                                                     cAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGt     >  2:1570506/1‑93 (MQ=255)

                                                                                      aGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGtt    <  1:5658841/93‑1 (MQ=255)

                                                                                       gCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTa   >  2:6696759/1‑93 (MQ=255)

                                                                                       gCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTa   >  2:2075166/1‑93 (MQ=255)

TGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTT‑ACAGCTGCGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAG  >  NC_000913/4356904‑4357083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 256 total aligned reads displayed.

CGATGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGCGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAGCTGC  >  NC_000913/4356901‑4357087

CGATGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGT                                                                                               <  SRR4302540.9200374/94‑1 (MQ=60)

CGATGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGT                                                                                               <  SRR4302540.4630599/94‑1 (MQ=60)

CGATGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGT                                                                                               >  SRR4302540.320021/1‑94 (MQ=60)

 GATGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTG                                                                                              <  SRR4302540.5297804/94‑1 (MQ=60)

  ATGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGG                                                                                             >  SRR4302540.3479736/1‑94 (MQ=60)

   TGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGA                                                                                            <  SRR4302540.450871/94‑1 (MQ=60)

   TGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGA                                                                                            >  SRR4302540.3081338/1‑94 (MQ=60)

    GTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGAT                                                                                           >  SRR4302540.3170816/1‑94 (MQ=60)

    GTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGAT                                                                                           <  SRR4302540.5133939/94‑1 (MQ=60)

    GTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGATTTTAACCATACCAGTACTTACAGCTGTGGAT                                                                                           >  SRR4302540.7107377/1‑94 (MQ=60)

     TAAACAATACCTGCTAAACCGGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATT                                                                                          <  SRR4302540.6299090/94‑1 (MQ=60)

     TAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATT                                                                                          >  SRR4302540.386567/1‑94 (MQ=60)

     TAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATT                                                                                          >  SRR4302540.5552488/1‑94 (MQ=60)

      AAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTC                                                                                         >  SRR4302540.288040/1‑94 (MQ=60)

      AAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTC                                                                                         >  SRR4302540.7215304/1‑94 (MQ=60)

      AAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTC                                                                                         >  SRR4302540.724645/1‑94 (MQ=60)

      AAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTC                                                                                         >  SRR4302540.2722698/1‑94 (MQ=60)

       AACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCA                                                                                        >  SRR4302540.1501249/1‑94 (MQ=60)

       AACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCA                                                                                        <  SRR4302540.7688531/94‑1 (MQ=60)

       AACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCA                                                                                        >  SRR4302540.9712898/1‑94 (MQ=60)

        ACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAA                                                                                       >  SRR4302540.3742643/1‑94 (MQ=60)

         CAATGCCTGCTAAACCAGTACCCAGCATGGTTGCGAGCGGAACGGTACGTTTCGGGTTTTTAACCGTACCAGTACTTACAGCTGTGGATTCAAC                                                                                      <  SRR4302540.386188/94‑1 (MQ=60)

         CAATCCCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAAC                                                                                      <  SRR4302540.10007311/94‑1 (MQ=60)

         CAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAAC                                                                                      >  SRR4302540.5808699/1‑94 (MQ=60)

          AATACCTGCTAAACCAGTCCCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACTAGTACTTACAGCTGTGGATTCAACA                                                                                     <  SRR4302540.1113727/94‑1 (MQ=60)

          AATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACA                                                                                     <  SRR4302540.81291/94‑1 (MQ=60)

          AATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACA                                                                                     <  SRR4302540.6480926/94‑1 (MQ=60)

          AATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACA                                                                                     <  SRR4302540.737773/94‑1 (MQ=60)

           ATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACAC                                                                                    <  SRR4302540.421713/94‑1 (MQ=60)

           ATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACAC                                                                                    >  SRR4302540.1256959/1‑94 (MQ=60)

             ACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCC                                                                                  <  SRR4302540.2520767/94‑1 (MQ=60)

             ACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCC                                                                                  <  SRR4302540.9736222/94‑1 (MQ=60)

             ACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCC                                                                                  >  SRR4302540.7574600/1‑94 (MQ=60)

              CCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCA                                                                                 <  SRR4302540.4985561/94‑1 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                >  SRR4302540.2066085/1‑94 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                <  SRR4302540.3350617/94‑1 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                <  SRR4302540.310602/94‑1 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                >  SRR4302540.3480039/1‑94 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                >  SRR4302540.2629162/1‑94 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                >  SRR4302540.2617829/1‑94 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                >  SRR4302540.2617828/1‑94 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                >  SRR4302540.2532152/1‑94 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                >  SRR4302540.1674196/1‑94 (MQ=60)

               CTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                >  SRR4302540.1906438/1‑94 (MQ=60)

               CTCCTAAACCAGTACCCAGCATGGTTCCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCAC                                                                                <  SRR4302540.5084816/94‑1 (MQ=60)

                TGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTGCTTACAGCTGTGGATTCAACACCCACG                                                                               >  SRR4302540.9498538/1‑94 (MQ=60)

                TGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACG                                                                               <  SRR4302540.5112722/94‑1 (MQ=60)

                 GCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGA                                                                              >  SRR4302540.1214436/1‑94 (MQ=60)

                 GCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGA                                                                              >  SRR4302540.7139524/1‑94 (MQ=60)

                  CTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAA                                                                             <  SRR4302540.4397314/94‑1 (MQ=60)

                  CTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAA                                                                             <  SRR4302540.7081267/94‑1 (MQ=60)

                   TAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAG                                                                            <  SRR4302540.9685568/94‑1 (MQ=60)

                   TAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAG                                                                            <  SRR4302540.9397519/94‑1 (MQ=60)

                   TAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAG                                                                            >  SRR4302540.3482762/1‑94 (MQ=60)

                   TAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAG                                                                            <  SRR4302540.337854/94‑1 (MQ=60)

                    AAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGG                                                                           >  SRR4302540.9173245/1‑94 (MQ=60)

                    AAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGG                                                                           <  SRR4302540.1641734/94‑1 (MQ=60)

                     AACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGC                                                                          >  SRR4302540.4983744/1‑94 (MQ=60)

                     AACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGC                                                                          >  SRR4302540.10047656/1‑94 (MQ=60)

                      ACCAGTACCCAGCATGGTGGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCC                                                                         <  SRR4302540.5582373/94‑1 (MQ=60)

                       CCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCC                                                                        <  SRR4302540.4767975/94‑1 (MQ=60)

                        CAGTGCCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCA                                                                       <  SRR4302540.216401/94‑1 (MQ=60)

                        CAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCA                                                                       <  SRR4302540.2603675/94‑1 (MQ=60)

                         AGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCAC                                                                      <  SRR4302540.1530637/94‑1 (MQ=60)

                         AGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCAC                                                                      >  SRR4302540.3330368/1‑94 (MQ=60)

                         AGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCAC                                                                      >  SRR4302540.9016667/1‑94 (MQ=60)

                         AGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCAC                                                                      >  SRR4302540.10067791/1‑94 (MQ=60)

                          GTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACA                                                                     >  SRR4302540.9311762/1‑94 (MQ=60)

                          GTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACA                                                                     >  SRR4302540.2214054/1‑94 (MQ=60)

                          GTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACA                                                                     >  SRR4302540.4090459/1‑94 (MQ=60)

                          GTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCACTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACA                                                                     <  SRR4302540.1520183/94‑1 (MQ=60)

                           TACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAG                                                                    <  SRR4302540.7594075/94‑1 (MQ=60)

                           TACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAG                                                                    <  SRR4302540.4016596/94‑1 (MQ=60)

                           GACCCAGCATGGGTGCCAGCGGAACGGTACTTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAG                                                                    <  SRR4302540.8888374/94‑1 (MQ=60)

                            ACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGG                                                                   <  SRR4302540.425454/94‑1 (MQ=60)

                             CCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGC                                                                  <  SRR4302540.4598216/94‑1 (MQ=60)

                             CCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGC                                                                  >  SRR4302540.4731836/1‑94 (MQ=60)

                              CCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCA                                                                 >  SRR4302540.4668950/1‑94 (MQ=60)

                               CAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAG                                                                <  SRR4302540.9041799/94‑1 (MQ=60)

                               CAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAG                                                                >  SRR4302540.484654/1‑94 (MQ=60)

                               CAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAG                                                                <  SRR4302540.6274895/94‑1 (MQ=60)

                                AGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGA                                                               >  SRR4302540.5904394/1‑94 (MQ=60)

                                AGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGA                                                               <  SRR4302540.9279092/94‑1 (MQ=60)

                                AGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGA                                                               >  SRR4302540.1170103/1‑94 (MQ=60)

                                AGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGA                                                               <  SRR4302540.3234092/94‑1 (MQ=60)

                                 GCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAG                                                              >  SRR4302540.355881/1‑94 (MQ=60)

                                 GCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAG                                                              <  SRR4302540.5701878/94‑1 (MQ=60)

                                 GCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAG                                                              <  SRR4302540.1957964/94‑1 (MQ=60)

                                 GCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAG                                                              <  SRR4302540.2108304/94‑1 (MQ=60)

                                 GCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAG                                                              >  SRR4302540.6638435/1‑94 (MQ=60)

                                 GCATGGTTGCCAGCGAAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGAGGATTCAACACCCACGAAGGCACACAGGCAAAG                                                              <  SRR4302540.9090364/94‑1 (MQ=60)

                                 GCATGGTGGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAG                                                              <  SRR4302540.4350938/94‑1 (MQ=60)

                                 GCATAGTTGCCAGCGGAACGGTACGTTACGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAG                                                              <  SRR4302540.842515/94‑1 (MQ=60)

                                  CATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGCGC                                                             >  SRR4302540.1377857/1‑94 (MQ=60)

                                  CATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGC                                                             <  SRR4302540.3446884/94‑1 (MQ=60)

                                   ATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCA                                                            <  SRR4302540.881363/94‑1 (MQ=60)

                                   ATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCA                                                            >  SRR4302540.2405513/1‑94 (MQ=60)

                                   ATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCA                                                            >  SRR4302540.5660522/1‑94 (MQ=60)

                                    TGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAG                                                           <  SRR4302540.3709817/94‑1 (MQ=60)

                                     GGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGA                                                          <  SRR4302540.6974681/94‑1 (MQ=60)

                                     GGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGA                                                          <  SRR4302540.3592052/94‑1 (MQ=60)

                                      GTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAA                                                         >  SRR4302540.8610277/1‑94 (MQ=60)

                                      GTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAA                                                         >  SRR4302540.9004934/1‑94 (MQ=60)

                                      GTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAA                                                         >  SRR4302540.3880362/1‑94 (MQ=60)

                                        TGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATA                                                       <  SRR4302540.5223601/94‑1 (MQ=60)

                                        TGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATA                                                       <  SRR4302540.7681669/94‑1 (MQ=60)

                                         GCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATAC                                                      >  SRR4302540.5323675/1‑94 (MQ=60)

                                          CCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACT                                                     <  SRR4302540.1673521/94‑1 (MQ=60)

                                          CCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACT                                                     <  SRR4302540.398526/94‑1 (MQ=60)

                                            AGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTT                                                   >  SRR4302540.7422965/1‑94 (MQ=60)

                                            AGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTT                                                   <  SRR4302540.917927/94‑1 (MQ=60)

                                               GGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAA                                                >  SRR4302540.7553190/1‑94 (MQ=60)

                                               GGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAA                                                <  SRR4302540.8579106/94‑1 (MQ=60)

                                                GAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAAT                                               <  SRR4302540.1040617/94‑1 (MQ=60)

                                                 AACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATG                                              >  SRR4302540.1162756/1‑94 (MQ=60)

                                                 AACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATG                                              <  SRR4302540.10136221/94‑1 (MQ=60)

                                                  ACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGA                                             <  SRR4302540.5138115/94‑1 (MQ=60)

                                                  ACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGA                                             <  SRR4302540.9872395/94‑1 (MQ=60)

                                                  ACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGA                                             >  SRR4302540.7655358/1‑94 (MQ=60)

                                                   CGGTACGTTTCGGGTTTTTAACCATACCAGTTCTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGAT                                            <  SRR4302540.3833672/94‑1 (MQ=60)

                                                   CGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGAT                                            <  SRR4302540.9548434/94‑1 (MQ=60)

                                                   CGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGAT                                            >  SRR4302540.7206740/1‑94 (MQ=60)

                                                   CGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGAT                                            <  SRR4302540.278009/94‑1 (MQ=60)

                                                    GGTACGTTTCGGGTTTTTAACCATTCCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATC                                           <  SRR4302540.3214939/94‑1 (MQ=60)

                                                    GGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATC                                           >  SRR4302540.825176/1‑94 (MQ=60)

                                                    GGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATC                                           <  SRR4302540.6646381/94‑1 (MQ=60)

                                                        CGTTTCGGGTTTTTAACCATACCAGTTCTTACAGCTGTGGATTCAACACCCACGAAGGTCCACAGGCAGAGCATAATACTTTTAATGATCTCAT                                       <  SRR4302540.1819759/94‑1 (MQ=60)

                                                        CGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCAT                                       >  SRR4302540.3696194/1‑94 (MQ=60)

                                                        CGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCAT                                       <  SRR4302540.9780279/94‑1 (MQ=60)

                                                        CGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCAT                                       <  SRR4302540.451834/94‑1 (MQ=60)

                                                        CGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCAT                                       >  SRR4302540.3638356/1‑94 (MQ=60)

                                                        CGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCAT                                       <  SRR4302540.6945098/94‑1 (MQ=60)

                                                        CGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCAT                                       >  SRR4302540.6502363/1‑94 (MQ=60)

                                                        CGTGTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCAT                                       <  SRR4302540.5476293/94‑1 (MQ=60)

                                                         GTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGTATACTTTTAATGATCGCATG                                      >  SRR4302540.7779727/1‑94 (MQ=60)

                                                         GTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATG                                      >  SRR4302540.7779728/1‑94 (MQ=60)

                                                         GTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATG                                      >  SRR4302540.6718323/1‑94 (MQ=60)

                                                         GTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATG                                      >  SRR4302540.3836777/1‑94 (MQ=60)

                                                         GTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATG                                      >  SRR4302540.4269180/1‑94 (MQ=60)

                                                          TTTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGA                                     <  SRR4302540.5044571/94‑1 (MQ=60)

                                                           TTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGAC                                    >  SRR4302540.2715258/1‑94 (MQ=60)

                                                           TTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGAC                                    <  SRR4302540.9618647/94‑1 (MQ=60)

                                                           TTCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGAC                                    <  SRR4302540.7415315/94‑1 (MQ=60)

                                                            TCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACC                                   <  SRR4302540.7849718/94‑1 (MQ=60)

                                                            TCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACC                                   <  SRR4302540.6516487/94‑1 (MQ=60)

                                                            TCGGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGACCCACAGGCAGAGCAGAATACTTTTAATGATAGCATGACC                                   >  SRR4302540.81284/1‑94 (MQ=60)

                                                              GGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCAT                                 >  SRR4302540.4718615/1‑94 (MQ=60)

                                                              GGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCAT                                 <  SRR4302540.454915/94‑1 (MQ=60)

                                                              CGGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCAT                                 <  SRR4302540.8514277/94‑1 (MQ=60)

                                                               GGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATC                                >  SRR4302540.6533169/1‑94 (MQ=60)

                                                               GGTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATC                                <  SRR4302540.4157552/94‑1 (MQ=60)

                                                                GTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCA                               >  SRR4302540.947684/1‑94 (MQ=60)

                                                                GTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCA                               <  SRR4302540.3801867/94‑1 (MQ=60)

                                                                GTTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCA                               >  SRR4302540.4520573/1‑94 (MQ=60)

                                                                 TTTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAG                              >  SRR4302540.828256/1‑94 (MQ=60)

                                                                  TTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGT                             <  SRR4302540.9215110/94‑1 (MQ=60)

                                                                  TTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGT                             <  SRR4302540.3054243/94‑1 (MQ=60)

                                                                  TTTTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGG                             >  SRR4302540.8001444/1‑94 (MQ=60)

                                                                    TTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGG                           >  SRR4302540.9363759/1‑94 (MQ=60)

                                                                    TTAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGG                           >  SRR4302540.5976653/1‑94 (MQ=60)

                                                                     TAACCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGT                          >  SRR4302540.4398038/1‑94 (MQ=60)

                                                                        CCATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATC                       <  SRR4302540.5454360/94‑1 (MQ=60)

                                                                         CATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCC                      >  SRR4302540.1272234/1‑94 (MQ=60)

                                                                          ATACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCG                     <  SRR4302540.8056497/94‑1 (MQ=60)

                                                                            ACCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCA                   >  SRR4302540.8666945/1‑94 (MQ=60)

                                                                             CCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAG                  >  SRR4302540.8106674/1‑94 (MQ=60)

                                                                             CCAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAG                  >  SRR4302540.9823580/1‑94 (MQ=60)

                                                                              CAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGT                 >  SRR4302540.6200678/1‑94 (MQ=60)

                                                                              CAGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGA                 >  SRR4302540.3467413/1‑94 (MQ=60)

                                                                               AGTACTTACAGCTGTGGATTTAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCAGCAGTGGTATCCGCAGTA                >  SRR4302540.9090480/1‑94 (MQ=60)

                                                                               AGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTA                >  SRR4302540.7880023/1‑94 (MQ=60)

                                                                               AGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTA                >  SRR4302540.6849489/1‑94 (MQ=60)

                                                                               AGTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTA                <  SRR4302540.6786948/94‑1 (MQ=60)

                                                                                GTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTAT               <  SRR4302540.10044276/94‑1 (MQ=60)

                                                                                GTACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTAT               <  SRR4302540.7709450/94‑1 (MQ=60)

                                                                                 TACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATT              >  SRR4302540.9577933/1‑94 (MQ=60)

                                                                                 TACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATT              >  SRR4302540.7150345/1‑94 (MQ=60)

                                                                                 TACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATT              >  SRR4302540.8999476/1‑94 (MQ=60)

                                                                                  ACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTC             <  SRR4302540.1189553/94‑1 (MQ=60)

                                                                                  ACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTC             <  SRR4302540.6779558/94‑1 (MQ=60)

                                                                                  ACTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTC             >  SRR4302540.6649618/1‑94 (MQ=60)

                                                                                   CTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCC            <  SRR4302540.988069/94‑1 (MQ=60)

                                                                                   CTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCC            <  SRR4302540.8447096/94‑1 (MQ=60)

                                                                                   CTTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCC            <  SRR4302540.1628000/94‑1 (MQ=60)

                                                                                    TTACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCA           <  SRR4302540.1081212/94‑1 (MQ=60)

                                                                                     TACAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAG          <  SRR4302540.7199525/94‑1 (MQ=60)

                                                                                       CAGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTT        >  SRR4302540.7837771/1‑94 (MQ=60)

                                                                                        AGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTA       <  SRR4302540.5721151/94‑1 (MQ=60)

                                                                                        AGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTA       >  SRR4302540.6286637/1‑94 (MQ=60)

                                                                                        AGCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTA       <  SRR4302540.68975/94‑1 (MQ=60)

                                                                                         GCTGTGGATTCAACACCCACGAGGGCCCTCAGGCAGAGCAGAATACTATTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAATTAG      <  SRR4302540.9078809/94‑1 (MQ=60)

                                                                                         GCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATTCTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAG      <  SRR4302540.6740073/94‑1 (MQ=60)

                                                                                         GCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAG      >  SRR4302540.3892672/1‑94 (MQ=60)

                                                                                         GCTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAG      <  SRR4302540.6740074/94‑1 (MQ=60)

                                                                                          CTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAGC     >  SRR4302540.9240445/1‑94 (MQ=60)

                                                                                          CTGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTACAGTTAGC     >  SRR4302540.6872313/1‑94 (MQ=60)

                                                                                           TGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAGCT    <  SRR4302540.4311061/94‑1 (MQ=60)

                                                                                           TGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAGCT    <  SRR4302540.6001007/94‑1 (MQ=60)

                                                                                           TGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAGCT    <  SRR4302540.7770425/94‑1 (MQ=60)

                                                                                           TGTGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAGCT    <  SRR4302540.8866317/94‑1 (MQ=60)

CGATGTAAACAATACCTGCTAAACCAGTACCCAGCATGGTTGCCAGCGGAACGGTACGTTTCGGGTTTTTAACCATACCAGTACTTACAGCTGCGGATTCAACACCCACGAAGGCCCACAGGCAGAGCAGAATACTTTTAATGATCGCATGACCATCAGTGGTATCCGCAGTATTCCAGTTAGCTGC  >  NC_000913/4356901‑4357087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`