Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 245 579.6 28867798 97.7% 28203838 96.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,001,717 +C coding (86/903 nt) rarD ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,001,7171.C99.7% 1399.6 / ‑4.0 376coding (86/903 nt)rarDhypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base C (139/236);  total (140/236)
Fisher's exact test for biased strand distribution p-value = 3.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.02e-01

Only 100 of 465 total aligned reads displayed.

AAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT  >  NC_000913/4001622‑4001806
                                                                                                  |                                                                                         
aaaTGCTCATCAGGACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACg                                                                                            >  1:10972613/1‑96 (MQ=255)
aaaTGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACg                                                                                            >  2:6218484/1‑96 (MQ=255)
aaaTGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACg                                                                                            <  2:10257064/96‑1 (MQ=255)
aaaTGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAAATTGAAGTACg                                                                                            >  1:947000/1‑96 (MQ=255)
 aaTGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgc                                                                                           >  1:281605/1‑95 (MQ=255)
  aTGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgct                                                                                          <  1:10665452/96‑3 (MQ=255)
  aTGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgct                                                                                          <  1:3159311/96‑3 (MQ=255)
    gCTCATCAGCACCACCATAAAGAAAAACGCCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgctgg                                                                                        <  1:4994056/96‑5 (MQ=255)
    gCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgctgg                                                                                        >  1:7412902/1‑92 (MQ=255)
      tcatcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGgcg                                                                                      <  2:10876417/96‑1 (MQ=255)
        atcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTATTAAATCAACTTGAAGTATGCTGGCGCt                                                                                    >  1:7894482/1‑96 (MQ=255)
        atcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGAACGCTGGCGCt                                                                                    >  2:6407150/1‑96 (MQ=255)
         tcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCta                                                                                   >  1:13178723/1‑96 (MQ=255)
         tcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCta                                                                                   <  2:1373469/96‑1 (MQ=255)
          caGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCtat                                                                                  <  2:172388/96‑1 (MQ=255)
          caGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATAGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCtat                                                                                  <  1:12418359/96‑1 (MQ=255)
              agcaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAccc                                                                              >  1:10292495/3‑96 (MQ=255)
              accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTATAccc                                                                              >  1:2276280/1‑96 (MQ=255)
                caccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTGGTAAATCAACTTGAAGTATGGTGGCGCTATACCCCa                                                                            >  1:3508621/1‑96 (MQ=255)
                 accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaa                                                                           <  2:4843197/96‑1 (MQ=255)
                 accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaa                                                                           <  2:530833/96‑1 (MQ=255)
                 accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaa                                                                           <  1:4810115/96‑1 (MQ=255)
                 accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaa                                                                           >  2:363339/1‑96 (MQ=255)
                  ccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaa                                                                          <  1:3940548/96‑1 (MQ=255)
                  caaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATAGGCGGGCACGTAGTAAATCAACTTGAAGGACGCTGGCGCTGTACCCCcaa                                                                          >  1:11820982/3‑96 (MQ=255)
                   caTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaat                                                                         <  1:9657365/96‑1 (MQ=255)
                    aTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAAACAACTTGAAGTACGCTGGGGCTATACCCCaaata                                                                        >  2:8585912/1‑96 (MQ=255)
                      aaaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACCGAGTAAATCAACTTGAACTACGCTGGCGCTGTACCCCaaataaa                                                                      >  2:1243215/1‑96 (MQ=255)
                        aGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaat                                                                    >  1:6344057/1‑96 (MQ=255)
                         gAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaata                                                                   <  1:8555560/96‑1 (MQ=255)
                         gAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACTTTAAGGACACCTGGGCTATACCCCaaataaaata                                                                   >  2:5615595/1‑96 (MQ=255)
                         gAAAAACGACCAGATCACGCGATGCGTCACGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaata                                                                   >  1:11234740/1‑96 (MQ=255)
                           aaaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAg                                                                 <  2:867995/96‑1 (MQ=255)
                            aaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACATGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGc                                                                >  2:12240706/1‑96 (MQ=255)
                             aaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCg                                                               <  2:13987050/96‑1 (MQ=255)
                             aaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCg                                                               <  2:13404986/96‑1 (MQ=255)
                             aaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCg                                                               <  1:5756871/96‑1 (MQ=255)
                             aaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCg                                                               <  1:8229912/96‑1 (MQ=255)
                             aaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCg                                                               >  1:4488506/1‑96 (MQ=255)
                              aCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGGACGTAGTAAATCAAATTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCgg                                                              >  2:13081703/1‑96 (MQ=255)
                               cGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGc                                                             <  2:7412902/96‑1 (MQ=255)
                                 aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCaa                                                           <  2:7744158/96‑1 (MQ=255)
                                 aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAAAAACGGCaa                                                           >  1:2410124/1‑96 (MQ=255)
                                  ccAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAag                                                          <  2:12543002/96‑1 (MQ=255)
                                   cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                         <  2:11818776/96‑1 (MQ=255)
                                   cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                         <  1:714827/96‑1 (MQ=255)
                                   cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                         <  1:1655604/96‑1 (MQ=255)
                                   cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                         <  1:6965101/96‑1 (MQ=255)
                                    aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCCCGGAGGAAAACAACTTGAAGTACGCTTGGGCTATAACCCAAATAAAATAAGGGGCAagag                                                        >  2:7288059/1‑96 (MQ=255)
                                     gATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGc                                                       <  2:13313530/96‑1 (MQ=255)
                                     gATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGc                                                       <  2:10699696/96‑1 (MQ=255)
                                       tCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGa                                                     <  2:9158920/96‑1 (MQ=255)
                                       tCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGa                                                     >  1:10488306/1‑96 (MQ=255)
                                       tCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTCGAAGTACGCTGGCGCTCTACCCCAAATAAAATAAACGGCAATAGCGa                                                     >  2:11679925/1‑96 (MQ=255)
                                          cgcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGAGAGTa                                                  >  1:8954328/1‑96 (MQ=255)
                                           gcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTaa                                                 <  2:8086912/96‑1 (MQ=255)
                                            cgATGCGTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACTTGAAGTAAGCTGGCGCTATACCCCAAAAAAAATAAGCGGCAAGAGCGAGTAAt                                                >  2:4336564/1‑96 (MQ=255)
                                                 cGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTAAGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGcc                                           >  2:10384385/1‑96 (MQ=255)
                                                 cGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGcc                                           >  1:1992736/1‑96 (MQ=255)
                                                  gTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGccc                                          >  2:12892973/1‑96 (MQ=255)
                                                  gTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGccc                                          >  2:4028625/1‑96 (MQ=255)
                                                  gTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGccc                                          >  2:9434911/1‑96 (MQ=255)
                                                    cAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTg                                        <  1:5133282/96‑1 (MQ=255)
                                                    cAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTg                                        <  2:948630/96‑1 (MQ=255)
                                                       gATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCcg                                     <  2:1961275/96‑1 (MQ=255)
                                                       gATTTCATCGGCGGGCACGTAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCcg                                     >  2:3048934/1‑96 (MQ=255)
                                                        aTTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGGGTAATACGCCCTGCcgc                                    >  1:5909077/1‑96 (MQ=255)
                                                          ttCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgt                                  <  1:14108961/96‑1 (MQ=255)
                                                          ttCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgt                                  <  2:6921400/96‑1 (MQ=255)
                                                          ttCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCGGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgt                                  >  2:2453333/1‑96 (MQ=255)
                                                           tCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGGAATACGCCCTGCCGCgtt                                 >  2:5051953/1‑96 (MQ=255)
                                                            cATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgttt                                >  1:9971189/1‑96 (MQ=255)
                                                               cggcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgtt                             >  1:11657581/1‑96 (MQ=255)
                                                                ggcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgttt                            <  2:2149943/96‑1 (MQ=255)
                                                                ggcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgtat                            <  1:14269021/96‑3 (MQ=255)
                                                                 gcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                           <  1:5337296/96‑1 (MQ=255)
                                                                 gcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                           <  1:12892973/96‑1 (MQ=255)
                                                                  cggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTg                          >  2:9597393/1‑96 (MQ=255)
                                                                    ggCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                        >  1:9774981/1‑96 (MQ=255)
                                                                     gCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcat                       >  2:14215837/1‑96 (MQ=255)
                                                                      cACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTGGcatc                      >  1:4106128/1‑96 (MQ=255)
                                                                        cGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCGCTGCCGCGTTTGTTTTGcatcca                    >  1:10120083/1‑96 (MQ=255)
                                                                        cGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcca                    <  2:2865231/96‑1 (MQ=255)
                                                                         gtagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                   <  1:1208278/96‑1 (MQ=255)
                                                                          tagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATATGCCCTGCCGCGTTTGTTTTGcatccatc                  <  2:11438894/96‑1 (MQ=255)
                                                                          tagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccatc                  >  1:11513039/1‑96 (MQ=255)
                                                                           agtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCg                 <  2:5813399/96‑1 (MQ=255)
                                                                           agtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCg                 >  2:1877270/1‑96 (MQ=255)
                                                                           agtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCg                 <  2:7949950/96‑1 (MQ=255)
                                                                            gtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGTGGCAAGAGCGAGTAATACGCCCTGCCGCTTTTGTTTTGCATCCATCgg                <  2:12765324/96‑1 (MQ=255)
                                                                            gtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCgg                >  1:913647/1‑96 (MQ=255)
                                                                            gtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCgg                >  2:10179024/1‑96 (MQ=255)
                                                                             taAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCggg               <  2:758711/96‑1 (MQ=255)
                                                                              aaaTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGa              <  2:14409087/96‑1 (MQ=255)
                                                                                aTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGaag            <  1:13761735/96‑2 (MQ=255)
                                                                                aTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAt            <  2:4583666/96‑1 (MQ=255)
                                                                                     cTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCa       >  1:5468600/1‑96 (MQ=255)
                                                                                      ttGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAt      <  2:327475/96‑1 (MQ=255)
                                                                                         aaGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAtttt   >  1:173180/1‑96 (MQ=255)
                                                                                          aGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAttttt  <  1:13562366/96‑1 (MQ=255)
                                                                                                  |                                                                                         
AAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT  >  NC_000913/4001622‑4001806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 250 total aligned reads displayed.
GCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACA  >  NC_000913/4001617‑4001817
                                                                                                      |                                                                                                      
GCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG                                                                                                        <  SRR4302518.4350157/101‑1 (MQ=60)
  nnncAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                                      <  SRR4302518.11166654/97‑3 (MQ=60)
  NNNAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                                      <  SRR4302518.14121370/101‑3 (MQ=60)
  GGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                                      <  SRR4302518.3306831/101‑3 (MQ=60)
  GGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATAAACTTGAAGTACGct                                                                                                      >  SRR4302518.179388/1‑99 (MQ=60)
   NNNAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                                     <  SRR4302518.7473981/101‑4 (MQ=60)
   GCACATGCTCATCAGCCCCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                                     <  SRR4302518.2647130/101‑4 (MQ=60)
    CAACTTCTCATCCGCACCGCCATAAAGAAAAACTACCAGATCCCGCGATTCCTCAAGATTTCAGCCGCCTGCACCTAGTAAATCAACTTGAAGTACGCTGG                                                                                                   <  SRR4302518.3407572/101‑1 (MQ=17)
    CAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGG                                                                                                   >  SRR4302518.1473834/1‑101 (MQ=60)
    CAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGG                                                                                                   <  SRR4302518.408198/101‑1 (MQ=60)
     nnntgaTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                                  <  SRR4302518.12867258/95‑1 (MQ=60)
     AAATGCTCATCAGGACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATTAACTTGAAGTACGctnnn                                                                                                   >  SRR4302518.11486649/1‑96 (MQ=60)
     AAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                                  <  SRR4302518.6991021/101‑1 (MQ=60)
     AAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                                  <  SRR4302518.527356/101‑1 (MQ=60)
     AAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                                  >  SRR4302518.788403/1‑101 (MQ=60)
     AAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAAATTGAAGTACGctggg                                                                                                   >  SRR4302518.983619/1‑96 (MQ=60)
       ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATTAACTTGAAGTACGCTGGCGC                                                                                                >  SRR4302518.5296830/1‑101 (MQ=60)
        TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCACCTTGAAGTACGCTGGCGCT                                                                                               <  SRR4302518.5265112/101‑1 (MQ=60)
        TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCT                                                                                               <  SRR4302518.1754533/101‑1 (MQ=60)
        TACTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGGCAGGATTTCATCGGCGCGCACGGAGTAAATCAACTTGAAGTACAG‑‑TGGCGCT                                                                                               >  SRR4302518.3110363/1‑101 (MQ=60)
         NNNCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTA                                                                                              <  SRR4302518.13516568/101‑1 (MQ=60)
         NNNCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTA                                                                                              <  SRR4302518.9676919/101‑1 (MQ=60)
         GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCTCGCGTTGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTA                                                                                              <  SRR4302518.5826950/101‑1 (MQ=60)
         GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTA                                                                                              >  SRR4302518.1234181/1‑101 (MQ=60)
         GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTA                                                                                              <  SRR4302518.5538325/101‑1 (MQ=60)
         GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTA                                                                                              <  SRR4302518.1168060/101‑1 (MQ=60)
          NNNATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATAGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTAT                                                                                             <  SRR4302518.13003399/101‑1 (MQ=60)
          CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTAT                                                                                             <  SRR4302518.1159324/101‑1 (MQ=60)
           TCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTNNN                                                                                            >  SRR4302518.8555223/1‑101 (MQ=60)
           NNNTCAACACCACCATAAAGAAAAACGCCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATA                                                                                            <  SRR4302518.10259253/101‑1 (MQ=60)
           CCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATA                                                                                            <  SRR4302518.3379817/101‑1 (MQ=60)
            NNNCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAC                                                                                           <  SRR4302518.7708000/101‑1 (MQ=60)
            CATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGGACGCAGGAAATAAACTTGAAGTACGctggggcgtaac                                                                                            >  SRR4302518.92077/1‑89 (MQ=60)
            CATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAC                                                                                           <  SRR4302518.5976657/101‑1 (MQ=60)
             ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTATTAAATCAACTTGAAGTATGCTGGCGCTATNNN                                                                                          >  SRR4302518.8290513/1‑101 (MQ=60)
             ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATTAACTTGAAGTACGccggcgccatacc                                                                                           >  SRR4302518.1223428/1‑88 (MQ=60)
              TCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATANNN                                                                                         >  SRR4302518.13787069/1‑101 (MQ=60)
               NNNCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCC                                                                                        <  SRR4302518.12399410/101‑1 (MQ=60)
               CAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTACGCTGGCGCCATATCCC                                                                                        >  SRR4302518.5562635/1‑101 (MQ=60)
               CAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCC                                                                                        >  SRR4302518.1798074/1‑101 (MQ=60)
                AGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACAC‑‑CGGCGCTATACCCCA                                                                                       >  SRR4302518.2852790/1‑101 (MQ=60)
                AGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCNNN                                                                                       >  SRR4302518.12476116/1‑101 (MQ=60)
                 GCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAA                                                                                      <  SRR4302518.5061915/101‑1 (MQ=60)
                  CACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAA                                                                                     <  SRR4302518.4128580/101‑1 (MQ=60)
                   NNNACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAAT                                                                                    <  SRR4302518.10122853/101‑1 (MQ=60)
                   AGCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTAAACCCCANNN                                                                                    >  SRR4302518.10777981/1‑101 (MQ=60)
                   ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACTG‑‑TGGCGCTCTACCCCAAAA                                                                                    >  SRR4302518.4824859/1‑101 (MQ=60)
                   ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGGGCTATACCCCANNN                                                                                    >  SRR4302518.12077615/1‑101 (MQ=60)
                   ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAAA                                                                                    >  SRR4302518.2386714/1‑101 (MQ=60)
                     CACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTGGTAAATCAACTTGAAGTATGG‑‑TGGCGCTATACCCCAAATCA                                                                                  >  SRR4302518.3671971/1‑101 (MQ=60)
                     CACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAA                                                                                  <  SRR4302518.605230/101‑1 (MQ=60)
                      ACCATAAAGAAAAACCACCAGATCCCGCGATGCGTCAGGATTTCATCGGGGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATCCCCCAAATAAA                                                                                 <  SRR4302518.4245195/101‑1 (MQ=60)
                       CAATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATAGGCGGGCACGTAGTAAATCAACTTGAAGGACGCTGGCGCTGTACCCCCAATANNN                                                                                >  SRR4302518.12383462/1‑101 (MQ=60)
                        CATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAT                                                                               <  SRR4302518.4874317/101‑1 (MQ=60)
                         NNNAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATA                                                                              <  SRR4302518.8972675/101‑1 (MQ=60)
                         NNNAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCCGGCGATATAACCCAAATAAAATA                                                                              <  SRR4302518.14750413/101‑1 (MQ=60)
                          NNNAGAAAAACGACCCGATCCCGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATCA                                                                             <  SRR4302518.12007795/101‑1 (MQ=60)
                           AAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATNNN                                                                            >  SRR4302518.12169036/1‑101 (MQ=60)
                           AAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTACGCTGGCGCTATAACCCAAATAAAATAAG                                                                            >  SRR4302518.7288670/1‑101 (MQ=60)
                            NNNAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGC                                                                           <  SRR4302518.7613945/101‑1 (MQ=60)
                            NNNAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGC                                                                           <  SRR4302518.7483689/101‑1 (MQ=60)
                             NNNAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTCCGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                          <  SRR4302518.9403244/101‑1 (MQ=60)
                             NNNAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                          <  SRR4302518.8636221/101‑1 (MQ=60)
                             NNNAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                          <  SRR4302518.13759909/101‑1 (MQ=60)
                             AGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                          <  SRR4302518.6048598/101‑1 (MQ=60)
                              NNNAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGG                                                                         <  SRR4302518.9165271/101‑1 (MQ=60)
                               AAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGC                                                                        <  SRR4302518.2331664/101‑1 (MQ=60)
                               AAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACTTGAAGGAAGCCGGCGCTATACCCCAAATAAAATAAGCNNN                                                                        >  SRR4302518.14941137/1‑101 (MQ=60)
                                NNNACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCA                                                                       <  SRR4302518.10708890/101‑1 (MQ=60)
                                AAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATTAACTTGAAGTACGCTGGCGCTTTACCCCAAATAAAATAAGggnnn                                                                       >  SRR4302518.12012195/1‑96 (MQ=60)
                                 AAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTTAAGTACGCTGGCGCTATACCCCAAATAAAATAAGgggnnn                                                                      >  SRR4302518.7519298/1‑95 (MQ=60)
                                 AAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGGAAATCAACTTTAAGTACGCTGGCGCCATACCCCCAATAAAATAAGCGGNNN                                                                      >  SRR4302518.15078222/1‑101 (MQ=60)
                                  NNNGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCATG                                                                     <  SRR4302518.11172513/101‑1 (MQ=60)
                                  AACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAG                                                                     <  SRR4302518.2495147/101‑1 (MQ=60)
                                  AACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAG                                                                     >  SRR4302518.4721642/1‑101 (MQ=60)
                                   nnnnnnnnnnnnnGCGATGCGNCNNGNTNTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTTTACCCCAAATAAAATAAGCGGCAATA                                                                    <  SRR4302518.11164247/88‑1 (MQ=60)
                                   NNNACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                                    <  SRR4302518.8388079/101‑1 (MQ=60)
                                   ACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCCAGTAGGAAATCAACTTGAAGTACGCTGGGGCTATACCCCAAAataaataaaggggaaag                                                                    >  SRR4302518.4619705/1‑84 (MQ=60)
                                   ACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGGGGCAAGA                                                                    >  SRR4302518.1833062/1‑101 (MQ=60)
                                   ACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                                    <  SRR4302518.7335172/101‑1 (MQ=60)
                                    CGACCAGATCGCGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAG                                                                   <  SRR4302518.120902/101‑1 (MQ=60)
                                    CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAG                                                                   <  SRR4302518.6424292/101‑1 (MQ=60)
                                     NNNCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGC                                                                  <  SRR4302518.8028227/101‑1 (MQ=60)
                                     GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGC                                                                  >  SRR4302518.4318612/1‑101 (MQ=60)
                                     GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGC                                                                  >  SRR4302518.2050908/1‑101 (MQ=60)
                                     CACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGC                                                                  <  SRR4302518.3583430/101‑1 (MQ=60)
                                       CCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGA                                                                <  SRR4302518.6274411/101‑1 (MQ=60)
                                       CCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGA                                                                <  SRR4302518.5668571/101‑1 (MQ=60)
                                        CAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCNNN                                                               >  SRR4302518.12259940/1‑101 (MQ=60)
                                        CAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAG                                                               >  SRR4302518.6189401/1‑101 (MQ=60)
                                         NNNTCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGT                                                              <  SRR4302518.14247716/101‑1 (MQ=60)
                                         AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGA                                                              >  SRR4302518.7024903/1‑101 (MQ=60)
                                         AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGA                                                              >  SRR4302518.2631478/1‑101 (MQ=60)
                                          GATCACGCGATGCGTCAGGATTTCATCGGCGGGGACGTAGTAAAACAACTTGAAGTACGCTGGCGCTATACCCCCAATAAAATCAGCGGCAAGAGCGAGGA                                                             >  SRR4302518.822257/1‑101 (MQ=60)
                                          GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGGA                                                             >  SRR4302518.2488351/1‑101 (MQ=60)
                                          GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGANNN                                                             >  SRR4302518.10339184/1‑101 (MQ=60)
                                           ATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGAAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGAGGCAAAAGCGGGTAA                                                            >  SRR4302518.2196582/1‑101 (MQ=60)
                                            TTACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAACCCAAATAAAATAAGCGGCAAGAGCGAGgnnn                                                           >  SRR4302518.7948915/1‑97 (MQ=60)
                                            TCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTNNN                                                           >  SRR4302518.10015338/1‑101 (MQ=60)
                                            TCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTNNN                                                           >  SRR4302518.10979179/1‑101 (MQ=60)
                                            TCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTCGCGCTATACCCCAAATAAAATAAACGGCGAGAGCGAGannn                                                           >  SRR4302518.11719037/1‑97 (MQ=60)
                                            ACACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctggctatatccggcgctgtaatgcaggcgttgtttgaaaatcc                                                            <  SRR4302518.3673641/101‑45 (MQ=60)
                                            ACACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAT                                                           <  SRR4302518.5447906/101‑1 (MQ=60)
                                              AAGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAANNN                                                         >  SRR4302518.11666578/1‑101 (MQ=60)
                                                GCGATGCGTCAGGATTTCATCGGCGGGCACGGAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGAGCGAGTAATACGC                                                       >  SRR4302518.2403900/1‑101 (MQ=60)
                                                 NNNTGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCC                                                      <  SRR4302518.14893796/101‑1 (MQ=60)
                                                 CGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAAATTGAAGTACGCTGGCGCTATACCCCAAATAAAAAAAACGGCAAGAACGAGTAAAACGCC                                                      >  SRR4302518.697677/1‑101 (MQ=60)
                                                  GATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCC                                                     >  SRR4302518.2951701/1‑101 (MQ=60)
                                                   ATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCT                                                    <  SRR4302518.5250505/101‑1 (MQ=60)
                                                    TGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTA                                                   >  SRR4302518.1214852/1‑101 (MQ=60)
                                                    TGCGTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGAGCGAGTAATACGCCCTG                                                   >  SRR4302518.5028657/1‑101 (MQ=60)
                                                     GCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGC                                                  <  SRR4302518.6109998/101‑1 (MQ=60)
                                                      CGTCAGGATTTCATCGGCGGGCACGGAGGAAATCAACTTGGAGTACGCCTGCGCTGAAGCCCCAATAAAATAAGCGGCCAGAGCGAGTAATATGCCCTGCC                                                 >  SRR4302518.1643011/1‑101 (MQ=30)
                                                       GTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCCAATAAAATAAGCGGCAAGAGCGAGTAAAACGCCCTGNNN                                                >  SRR4302518.9962475/1‑101 (MQ=60)
                                                       GTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGGACGCTGGCGCCATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCG                                                >  SRR4302518.1052945/1‑101 (MQ=60)
                                                        TCAGGATTTCATCGGCGGGCCCGTAGTAAATCAACTTGACGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGC                                               <  SRR4302518.5900316/101‑1 (MQ=60)
                                                        TCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAATAAGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGAGCGAGTAATAGGCCCTGgnnn                                               >  SRR4302518.9457137/1‑97 (MQ=60)
                                                         CAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTTCGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCG                                              <  SRR4302518.398321/101‑1 (MQ=60)
                                                          NNNATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGT                                             <  SRR4302518.14755158/101‑1 (MQ=60)
                                                           NNNTTTCATCGGCGGGCACGTAGTAAGTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                            <  SRR4302518.8932905/101‑1 (MQ=60)
                                                           NNNTTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATCCCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                            <  SRR4302518.9881521/101‑1 (MQ=60)
                                                           GGATTTCATCGGCGGGCACGTAGTAAATCACCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                            <  SRR4302518.1799957/101‑1 (MQ=60)
                                                           GGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                            <  SRR4302518.3000431/101‑1 (MQ=60)
                                                            NNNTTCATGGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATTCCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                           <  SRR4302518.10242361/101‑1 (MQ=60)
                                                            NNNTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                           <  SRR4302518.7884752/101‑1 (MQ=60)
                                                            NNNTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTCT                                           <  SRR4302518.9870007/101‑1 (MQ=60)
                                                            GATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                           <  SRR4302518.5044143/101‑1 (MQ=60)
                                                            GATGTCATCGGCGGGCACGTAGTAAATCAGCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                           <  SRR4302518.5333272/101‑1 (MQ=60)
                                                              TTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGAAATACGCCCTGCCGCGCTTGT                                         >  SRR4302518.2324987/1‑101 (MQ=60)
                                                               TTCATCGGCGGGCACGTAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGGTTGCT                                        >  SRR4302518.7318509/1‑101 (MQ=60)
                                                                nnntccggGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTT                                       <  SRR4302518.14186527/93‑1 (MQ=60)
                                                                NNNTCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTT                                       <  SRR4302518.10803875/101‑1 (MQ=60)
                                                                NNNTCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTAT                                       <  SRR4302518.14927313/101‑1 (MQ=60)
                                                                 NNNCGGTGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                                      <  SRR4302518.13491526/101‑1 (MQ=60)
                                                                 CATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGGGCTATACCCCAAATAAAATAAGAGGCAAAAGCGAGTAATACGCCCTGCCGCGTTTGTTTG                                      >  SRR4302518.2135487/1‑101 (MQ=60)
                                                                 CATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                                      >  SRR4302518.345053/1‑101 (MQ=60)
                                                                 CATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                                      <  SRR4302518.5610787/101‑1 (MQ=60)
                                                                 CATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTNNN                                      >  SRR4302518.10445926/1‑101 (MQ=60)
                                                                  ATCGGCGGGCACGTAGTAAAACAACTTGAAGGACGCCGGCGCTGTACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCCGCCGCGTTTGGTTTG                                     >  SRR4302518.1444456/1‑101 (MQ=60)
                                                                    CGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTNNN                                   >  SRR4302518.12206386/1‑101 (MQ=60)
                                                                    CGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCA                                   <  SRR4302518.5084096/101‑1 (MQ=60)
                                                                     GGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCAT                                  <  SRR4302518.5650198/101‑1 (MQ=60)
                                                                     GGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCAT                                  <  SRR4302518.5788210/101‑1 (MQ=60)
                                                                      NNNGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATC                                 <  SRR4302518.14848414/101‑1 (MQ=60)
                                                                      NNNGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCACC                                 <  SRR4302518.12317835/101‑1 (MQ=60)
                                                                       CGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTTCCGCGTTTGTTTTGCANNN                                >  SRR4302518.11124335/1‑101 (MQ=60)
                                                                       CGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                                <  SRR4302518.1428037/101‑1 (MQ=60)
                                                                       CGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                                >  SRR4302518.272918/1‑101 (MQ=60)
                                                                        GGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCATATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTACCGCGTTTGTTGTGCATNNN                               >  SRR4302518.11451493/1‑101 (MQ=60)
                                                                        GGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAAAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGGTTGTTTTGCATCCA                               >  SRR4302518.4218247/1‑101 (MQ=60)
                                                                         NNNACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                              <  SRR4302518.7403153/101‑1 (MQ=60)
                                                                         NNNACGTAGTAAATCAACTTGAAGTACGCTGCCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTCATACGCCCTGCCGCGTTTGTTTTGCATCCAT                              <  SRR4302518.12757270/101‑1 (MQ=60)
                                                                         GGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCNNN                              >  SRR4302518.10243809/1‑101 (MQ=60)
                                                                         GGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                              <  SRR4302518.1257155/101‑1 (MQ=60)
                                                                         GGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                              <  SRR4302518.6734517/101‑1 (MQ=60)
                                                                          NNNCGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATC                             <  SRR4302518.14881702/101‑1 (MQ=60)
                                                                           CACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACTCCCTGCCGCGTTTGTTTTGCATCCANNN                            >  SRR4302518.12987562/1‑101 (MQ=60)
                                                                           CACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTGGCATCCATCG                            >  SRR4302518.4305065/1‑101 (MQ=60)
                                                                            CCGTAGTAAATCACCTTGAAGTACGCTGGCTCTATACCCCAAATAAAAGAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGG                           <  SRR4302518.5626857/101‑1 (MQ=60)
                                                                            ACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATNNN                           >  SRR4302518.10011475/1‑101 (MQ=60)
                                                                             CGTAGTAAATCAGCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGG                          <  SRR4302518.1340768/101‑1 (MQ=60)
                                                                             CGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCGCTGCCGCGTTTGTTTTGCATCCATCNNN                          >  SRR4302518.10598638/1‑101 (MQ=60)
                                                                              NNNGTAGATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGA                         <  SRR4302518.13488516/101‑1 (MQ=60)
                                                                              GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGNNN                         >  SRR4302518.13806165/1‑101 (MQ=60)
                                                                              GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAACAAGCGGAAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGA                         <  SRR4302518.549135/101‑1 (MQ=60)
                                                                              GTAGTAAATCAACTTGAAGGACGCTGGCGCTATACCCCATATAAAATAAGCGGCAAGAGCGAGTAACACGCCCTGCCGCGTTTGTTTTGCATCCATCGNNN                         >  SRR4302518.14804472/1‑101 (MQ=60)
                                                                               TAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAA                        >  SRR4302518.525218/1‑101 (MQ=60)
                                                                                NNNAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAT                       <  SRR4302518.14979947/101‑1 (MQ=60)
                                                                                NNNAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAG                       <  SRR4302518.14391745/101‑1 (MQ=60)
                                                                                 NNNAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAACA                      <  SRR4302518.11301181/101‑1 (MQ=60)
                                                                                 GTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATA                      >  SRR4302518.949000/1‑101 (MQ=60)
                                                                                  TAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAANNN                     >  SRR4302518.10673838/1‑101 (MQ=60)
                                                                                  NNNATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC                     <  SRR4302518.14132255/101‑1 (MQ=60)
                                                                                    AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATANNN                   >  SRR4302518.9306114/1‑101 (MQ=60)
                                                                                     ATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCA                  <  SRR4302518.180860/101‑1 (MQ=60)
                                                                                      TCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAT                 <  SRR4302518.1962029/101‑1 (MQ=60)
                                                                                      ACAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTNNN                 >  SRR4302518.9337525/1‑101 (MQ=60)
                                                                                       CAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCNNN                >  SRR4302518.8936169/1‑101 (MQ=60)
                                                                                       CAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCNNN                >  SRR4302518.8552957/1‑101 (MQ=60)
                                                                                       CAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATT                >  SRR4302518.1004980/1‑101 (MQ=60)
                                                                                        NNNTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTT               <  SRR4302518.10253588/101‑1 (MQ=60)
                                                                                        AACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTT               >  SRR4302518.456275/1‑101 (MQ=60)
                                                                                         NNNTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCCTCCATCGGGAATACTCATTTT              <  SRR4302518.10872142/101‑1 (MQ=60)
                                                                                         ACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTT              >  SRR4302518.874572/1‑101 (MQ=60)
                                                                                          NNNGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAGTCATTTTT             <  SRR4302518.10981891/101‑1 (MQ=60)
                                                                                          NNNGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT             <  SRR4302518.14184742/101‑1 (MQ=60)
                                                                                          NNNGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTCT             <  SRR4302518.11341323/101‑1 (MQ=60)
                                                                                           TTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTNNN            >  SRR4302518.13107104/1‑101 (MQ=60)
                                                                                             GAAGTACGG‑‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTNNN          >  SRR4302518.10976769/1‑101 (MQ=60)
                                                                                             GAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTNNN          >  SRR4302518.14540074/1‑101 (MQ=60)
                                                                                             AAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTNNN          >  SRR4302518.11894374/1‑101 (MQ=60)
                                                                                              AAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCCAGAGCTAGGAATACGCCCTGCCGCGTGTGTTTTGCATCTATCGGGAATACTCAGTTTTAATT         >  SRR4302518.4466021/1‑101 (MQ=60)
                                                                                               AGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTG        >  SRR4302518.6216669/1‑101 (MQ=60)
                                                                                               AGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTG        >  SRR4302518.3723917/1‑101 (MQ=60)
                                                                                                GTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGG       <  SRR4302518.6594621/101‑1 (MQ=60)
                                                                                                    NN‑‑NGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAAC   <  SRR4302518.9329517/101‑1 (MQ=60)
                                                                                                      N‑‑NNGCGCTATTCCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACC  <  SRR4302518.11791083/101‑1 (MQ=60)
                                                                                                      N‑‑NNGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACA  <  SRR4302518.12820333/101‑1 (MQ=60)
                                                                                                      N‑‑NNGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACA  <  SRR4302518.12545878/101‑1 (MQ=60)
                                                                                                      C‑‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACA  <  SRR4302518.3078170/101‑1 (MQ=60)
                                                                                                      |                                                                                                      
GCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACA  >  NC_000913/4001617‑4001817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: