Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
673,104 |
T→C |
K301K (AAA→AAG) |
leuS ← |
leucine tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 673,104 | 0 | T | C | 100.0%
| 717.1
/ NA
| 225 | K301K (AAA→AAG) | leuS | leucine tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (128/97); total (128/97) |
Only 100 of 239 total aligned reads displayed.
GCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCTTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGC > NC_000913/673014‑673193
|
gCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCctt > 1:2691675/1‑93 (MQ=255)
ccGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCcttt < 2:4665677/93‑1 (MQ=255)
tACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtc > 1:4353943/1‑93 (MQ=255)
aCTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtct < 2:1304699/93‑1 (MQ=255)
aCTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtct < 2:1587261/93‑1 (MQ=255)
cTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtctc > 1:3753649/1‑93 (MQ=255)
cTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtctc > 2:4654523/1‑93 (MQ=255)
tCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTcc < 1:3570318/93‑1 (MQ=255)
ccATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCa < 2:691434/93‑1 (MQ=255)
ccATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCa < 2:3404119/93‑1 (MQ=255)
cATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAt < 1:1106207/93‑1 (MQ=255)
cATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAt < 1:4118151/93‑1 (MQ=255)
aTCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAtc > 2:1885529/1‑93 (MQ=255)
tCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAtcg < 1:2454851/93‑1 (MQ=255)
aaTACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAtcgtc < 2:3498999/93‑1 (MQ=255)
tccGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGc < 1:2552088/91‑1 (MQ=255)
tACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGc > 1:1457608/1‑93 (MQ=255)
aCGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGcc < 1:1090648/93‑1 (MQ=255)
gAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCAt > 2:4477660/1‑93 (MQ=255)
gAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCAt > 1:4091528/1‑93 (MQ=255)
aaGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCAtt > 2:876725/1‑93 (MQ=255)
tttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCa > 1:3156245/1‑93 (MQ=255)
tttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCa < 2:3913402/93‑1 (MQ=255)
tttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCa < 2:1745338/93‑1 (MQ=255)
tttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCa > 1:5623397/1‑93 (MQ=255)
ttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAg > 1:1175791/1‑93 (MQ=255)
ttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAg > 1:273904/1‑93 (MQ=255)
tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc < 1:6231591/93‑1 (MQ=255)
tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc > 2:4008936/1‑93 (MQ=255)
tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc > 1:1734990/1‑93 (MQ=255)
tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc < 2:5197080/93‑1 (MQ=255)
tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc > 1:517088/1‑93 (MQ=255)
gcCCAAACGGTAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCg < 2:2055358/93‑1 (MQ=255)
cccAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCgg > 1:4722202/1‑93 (MQ=255)
ccAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGc > 2:2229701/1‑93 (MQ=255)
cAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCa > 1:2217513/1‑93 (MQ=255)
aaaCGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCac > 1:1884123/1‑92 (MQ=255)
aCGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACt > 1:1485665/1‑93 (MQ=255)
gggAATTTCTTCGCCCGTTTATGGGTGAACCGCTTTAAAGCGAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACttt > 2:6114611/1‑93 (MQ=255)
gggAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACttt > 2:3582440/1‑93 (MQ=255)
gggAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACttt > 2:5626818/1‑93 (MQ=255)
gAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTgg > 1:5643439/1‑93 (MQ=255)
aTTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGgtg > 2:367571/1‑93 (MQ=255)
tttCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGgtgt > 1:1945494/1‑93 (MQ=255)
ttcttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGtt > 2:150591/1‑93 (MQ=255)
ttcttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGtt > 2:4466193/1‑93 (MQ=255)
tcttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTa > 2:3746720/1‑93 (MQ=255)
tcttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTa > 2:1183900/1‑93 (MQ=255)
cttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTAc > 1:1415356/1‑93 (MQ=255)
ttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACg < 2:5829865/93‑1 (MQ=255)
ttcGCCCGGTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACg > 2:6162573/1‑93 (MQ=255)
gCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCa < 1:3846088/93‑1 (MQ=255)
gCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCa > 2:6238452/1‑93 (MQ=255)
gCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCa > 1:3328439/1‑93 (MQ=255)
gCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCa > 1:5045797/1‑93 (MQ=255)
cccGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCAt < 2:2678779/93‑1 (MQ=255)
ccGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCAtt > 1:2623972/1‑93 (MQ=255)
ccGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCAtt > 2:3554387/1‑93 (MQ=255)
gTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCg < 1:3743131/93‑1 (MQ=255)
gTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCg < 1:3554409/93‑1 (MQ=255)
gTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCg > 2:3015951/1‑93 (MQ=255)
gTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCg < 1:4807007/93‑1 (MQ=255)
ttAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGt < 2:273045/93‑1 (MQ=255)
tGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAAt > 2:199711/1‑93 (MQ=255)
gTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATaaa < 1:632071/93‑1 (MQ=255)
taaCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAgg < 2:4937383/92‑1 (MQ=255)
aaCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgc < 1:6218319/93‑1 (MQ=255)
aaCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCAGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgc < 2:6047527/93‑1 (MQ=255)
aCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgcc > 1:2285444/1‑93 (MQ=255)
aCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgcc > 1:3888207/1‑93 (MQ=255)
aCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgcc > 1:782950/1‑93 (MQ=255)
gCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgccgcc > 1:1308351/1‑93 (MQ=255)
tttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAg > 2:5396187/1‑93 (MQ=255)
tttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAg > 1:2904078/1‑93 (MQ=255)
tttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAg > 1:4942156/1‑93 (MQ=255)
tttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAg > 2:1330666/1‑93 (MQ=255)
ttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGt < 1:5376940/93‑1 (MQ=255)
tAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGtt < 1:4612020/93‑1 (MQ=255)
tAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGtt > 1:2156741/1‑93 (MQ=255)
aaaGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTc > 2:3303690/1‑93 (MQ=255)
aaaGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTc < 2:5087658/93‑1 (MQ=255)
aaaGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCCGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTc > 1:3225683/1‑93 (MQ=255)
aaaGCCAGTATCGACGCCCTTTTT‑TCCATCGTCGCCATTTCAGCTTCGGCAACCTTGGTGTTACGGCCTTCGTCAATAAAAGCCGCCCGTTCa > 2:5902182/1‑93 (MQ=255)
aaGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCa < 2:4181573/93‑1 (MQ=255)
cAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGat < 2:1853318/93‑1 (MQ=255)
aGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGatt > 1:4733741/1‑93 (MQ=255)
tATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGattat > 1:3656642/1‑93 (MQ=255)
tATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAAGCCGCCAGTTCAGGattat > 2:2885102/1‑93 (MQ=255)
tCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAttt > 1:4075238/1‑93 (MQ=255)
tCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAttt > 1:5916923/1‑93 (MQ=255)
tCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAttt > 1:4863919/1‑93 (MQ=255)
cGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAtttt < 2:412137/93‑1 (MQ=255)
gACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTc < 1:5567462/93‑1 (MQ=255)
gACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTc < 1:5814437/93‑1 (MQ=255)
aCGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTcc < 2:314697/93‑1 (MQ=255)
cGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTccg > 2:5377407/1‑93 (MQ=255)
cGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTccg < 2:6178840/93‑1 (MQ=255)
gCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTccgc > 1:616234/1‑93 (MQ=255)
gCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTccgc > 1:2835556/1‑93 (MQ=255)
gCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGACCGCCAGTTCAGGATTATTTTccgc < 1:1296302/93‑1 (MQ=255)
|
GCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCTTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGC > NC_000913/673014‑673193
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTGCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCTTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGCCGCT > NC_000913/673011‑673197
|
CGTGCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCC < SRR4302533.3884211/94‑1 (MQ=60)
GTGCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGTACCGCTTTAAAGCCAGTATCGACGCCCT > SRR4302533.5182608/1‑94 (MQ=60)
TGCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTT > SRR4302533.2708172/1‑94 (MQ=60)
CCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTT > SRR4302533.177956/1‑94 (MQ=60)
GTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTC > SRR4302533.4380222/1‑94 (MQ=60)
GTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTC < SRR4302533.3833017/94‑1 (MQ=60)
TACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCT < SRR4302533.3885479/94‑1 (MQ=60)
TACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCT < SRR4302533.2885297/94‑1 (MQ=60)
ACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTC > SRR4302533.3776656/1‑94 (MQ=60)
CTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCC > SRR4302533.6236272/1‑94 (MQ=60)
TCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCA > SRR4302533.4066976/1‑94 (MQ=60)
TCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCA < SRR4302533.3592322/94‑1 (MQ=60)
TCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCA > SRR4302533.1139128/1‑94 (MQ=60)
CATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATC < SRR4302533.4143165/94‑1 (MQ=60)
CATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATC < SRR4302533.1112766/94‑1 (MQ=60)
ATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCACTTTTTCTCCATCG > SRR4302533.4122274/1‑94 (MQ=60)
TCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGT > SRR4302533.914079/1‑94 (MQ=60)
TCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGT < SRR4302533.2470001/94‑1 (MQ=60)
CAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTC > SRR4302533.1441140/1‑94 (MQ=60)
CAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTC > SRR4302533.3948238/1‑94 (MQ=60)
CAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTC < SRR4302533.4666049/94‑1 (MQ=60)
AATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCG > SRR4302533.1902544/1‑94 (MQ=60)
ATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGC > SRR4302533.1466398/1‑94 (MQ=60)
TCCGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCC < SRR4302533.2567793/94‑1 (MQ=60)
ACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCA < SRR4302533.1097091/94‑1 (MQ=60)
CGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCAT > SRR4302533.4116433/1‑94 (MQ=60)
AGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTC < SRR4302533.3478749/94‑1 (MQ=60)
GTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCA < SRR4302533.5606483/94‑1 (MQ=60)
GTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCA > SRR4302533.3175653/1‑94 (MQ=60)
GTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCA > SRR4302533.5657384/1‑94 (MQ=60)
GTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGAAGCCCTTTTTCTCCATCGTCGCCATTTCA > SRR4302533.259599/1‑94 (MQ=60)
GTGTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCA < SRR4302533.3482584/94‑1 (MQ=60)
TTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAG > SRR4302533.1182846/1‑94 (MQ=60)
TTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAG > SRR4302533.275570/1‑94 (MQ=60)
CTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTC < SRR4302533.5134549/94‑1 (MQ=60)
CTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTC > SRR4302533.1745516/1‑94 (MQ=60)
CTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTC > SRR4302533.520158/1‑94 (MQ=60)
CTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTC > SRR4302533.5785015/1‑94 (MQ=60)
TGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCG < SRR4302533.4152794/94‑1 (MQ=60)
TGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCG > SRR4302533.6312467/1‑94 (MQ=60)
TGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCG < SRR4302533.6268911/94‑1 (MQ=60)
TGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCG < SRR4302533.5339892/94‑1 (MQ=60)
GCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGG > SRR4302533.4750833/1‑94 (MQ=60)
GCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGG > SRR4302533.4750834/1‑94 (MQ=60)
GCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGG > SRR4302533.4846683/1‑94 (MQ=60)
CCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCA > SRR4302533.2231202/1‑94 (MQ=60)
CAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAC > SRR4302533.1895631/1‑94 (MQ=60)
AAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAAC > SRR4302533.1306804/1‑94 (MQ=60)
AACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACT > SRR4302533.1494632/1‑94 (MQ=60)
GGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTG > SRR4302533.6132302/1‑94 (MQ=60)
GGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGG > SRR4302533.1590062/1‑94 (MQ=60)
GGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGG > SRR4302533.5677553/1‑94 (MQ=60)
ATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGT > SRR4302533.1957358/1‑94 (MQ=60)
TTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTT < SRR4302533.5577111/94‑1 (MQ=60)
TTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTA > SRR4302533.2737874/1‑94 (MQ=60)
TTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATAGTAGCCATTTCAGCTTCGGCAACTTTGGTGTTA > SRR4302533.2737875/1‑94 (MQ=60)
TCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTAC > SRR4302533.4268739/1‑94 (MQ=60)
TCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTAC < SRR4302533.2402689/94‑1 (MQ=60)
TCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTAC > SRR4302533.1423918/1‑94 (MQ=60)
TCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTAC < SRR4302533.3652304/94‑1 (MQ=60)
CTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACG < SRR4302533.6117622/94‑1 (MQ=60)
CTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACG < SRR4302533.1262396/94‑1 (MQ=60)
CTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACG < SRR4302533.2293772/94‑1 (MQ=60)
CGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCA > SRR4302533.5076324/1‑94 (MQ=60)
CGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCA > SRR4302533.3349008/1‑94 (MQ=60)
GCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCAT > SRR4302533.3709975/1‑94 (MQ=60)
GCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCAT < SRR4302533.3869575/94‑1 (MQ=60)
CCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATT > SRR4302533.2640077/1‑94 (MQ=60)
CCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTC < SRR4302533.5417751/94‑1 (MQ=60)
GTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGT < SRR4302533.3766088/94‑1 (MQ=60)
GTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGT < SRR4302533.2018914/94‑1 (MQ=60)
GTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGT < SRR4302533.4836113/94‑1 (MQ=60)
GTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGT < SRR4302533.3576311/94‑1 (MQ=60)
GTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGT < SRR4302533.3576310/94‑1 (MQ=60)
GTCAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGT > SRR4302533.4109503/1‑94 (MQ=60)
TTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTC > SRR4302533.6258230/1‑94 (MQ=60)
TTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTC > SRR4302533.2571560/1‑94 (MQ=60)
TAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCA > SRR4302533.5076689/1‑94 (MQ=60)
AATGGGTGAACCTGTTGAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAA < SRR4302533.2203925/94‑1 (MQ=60)
AATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAA > SRR4302533.5001672/1‑94 (MQ=60)
GGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAA > SRR4302533.74427/1‑94 (MQ=60)
GGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAA > SRR4302533.2232779/1‑94 (MQ=60)
GGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAA > SRR4302533.3147185/1‑94 (MQ=60)
GGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAA < SRR4302533.5688303/94‑1 (MQ=60)
GGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAA > SRR4302533.4779301/1‑94 (MQ=60)
GGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAA < SRR4302533.1492304/94‑1 (MQ=60)
GTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAG < SRR4302533.635791/94‑1 (MQ=60)
GTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAG < SRR4302533.1521819/94‑1 (MQ=60)
AACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCC > SRR4302533.2299591/1‑94 (MQ=60)
AACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCC > SRR4302533.787555/1‑94 (MQ=60)
AACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCC > SRR4302533.3911931/1‑94 (MQ=60)
AACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCC < SRR4302533.6255604/94‑1 (MQ=60)
CCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGC > SRR4302533.385967/1‑94 (MQ=60)
CGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCGTTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCC > SRR4302533.4465403/1‑94 (MQ=60)
CGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCC < SRR4302533.3769691/94‑1 (MQ=60)
CGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCC > SRR4302533.1316205/1‑94 (MQ=60)
GCTTTAAAGCCAGTATCGACGCTCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCA < SRR4302533.4862495/94‑1 (MQ=60)
GCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCA > SRR4302533.4704375/1‑94 (MQ=60)
CTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAG > SRR4302533.2921915/1‑94 (MQ=60)
CTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAG > SRR4302533.4972073/1‑94 (MQ=60)
CTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAG < SRR4302533.1381231/94‑1 (MQ=60)
CTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAG < SRR4302533.2650437/94‑1 (MQ=60)
TTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGT > SRR4302533.6327583/1‑94 (MQ=60)
TTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGT > SRR4302533.5673759/1‑94 (MQ=60)
TTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGT > SRR4302533.3241005/1‑94 (MQ=60)
TTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTT < SRR4302533.5409255/94‑1 (MQ=60)
TTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTT < SRR4302533.5941341/94‑1 (MQ=60)
TTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTT > SRR4302533.2170019/1‑94 (MQ=60)
TAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTC < SRR4302533.4639963/94‑1 (MQ=60)
TAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCCGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTC > SRR4302533.3245570/1‑94 (MQ=60)
AAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCA > SRR4302533.2769904/1‑94 (MQ=60)
AAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAG > SRR4302533.1456693/1‑94 (MQ=60)
AGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGG < SRR4302533.1110453/94‑1 (MQ=60)
CAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATT > SRR4302533.4762439/1‑94 (MQ=60)
GTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAT > SRR4302533.3679121/1‑94 (MQ=60)
TATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATT > SRR4302533.1263068/1‑94 (MQ=60)
ATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTT > SRR4302533.4100046/1‑94 (MQ=60)
ATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTT < SRR4302533.3610648/94‑1 (MQ=60)
ATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTT > SRR4302533.4893393/1‑94 (MQ=60)
ATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTT > SRR4302533.5952683/1‑94 (MQ=60)
ATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTT > SRR4302533.4936388/1‑94 (MQ=60)
CGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTC > SRR4302533.2097916/1‑94 (MQ=60)
GACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCC < SRR4302533.3303883/94‑1 (MQ=60)
GACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCC < SRR4302533.5849554/94‑1 (MQ=60)
GACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCC < SRR4302533.5601114/94‑1 (MQ=60)
CGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGC > SRR4302533.619853/1‑94 (MQ=60)
CGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGC > SRR4302533.2853004/1‑94 (MQ=60)
CGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGC > SRR4302533.3002051/1‑94 (MQ=60)
GCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGCC < SRR4302533.2554914/94‑1 (MQ=60)
GCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGCC > SRR4302533.5528740/1‑94 (MQ=60)
GCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGACCGCCAGTTCAGGATTATTTTCCGCC < SRR4302533.1304106/94‑1 (MQ=60)
CCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGCCG < SRR4302533.4244782/94‑1 (MQ=60)
CCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGCCGC > SRR4302533.5937293/1‑94 (MQ=60)
CCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGCCGC > SRR4302533.4808494/1‑94 (MQ=60)
CTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGCCGCT > SRR4302533.5173692/1‑94 (MQ=60)
|
CGTGCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCTTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGCCGCT > NC_000913/673011‑673197
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
