Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,401,497 |
T→C |
I365V (ATT→GTT) |
ydaJ ← |
putative aminohydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,401,497 | 0 | T | C | 99.5%
| 658.5
/ NA
| 205 | I365V (ATT→GTT) | ydaJ | putative aminohydrolase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (100/104); minor base A (1/0); total (101/104) |
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 209 total aligned reads displayed.
CCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAATGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGCACC > NC_000913/1401407‑1401584
|
ccacGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACgg > 1:5099811/1‑93 (MQ=255)
ccacGTAGGAGGCTTGCCCTTGACGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACgg > 2:5070659/1‑93 (MQ=255)
ccacGTAGGAGGCGTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACgg < 2:2237271/93‑1 (MQ=255)
cGTAGGAGGCTTGCCCTTGATATTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCt < 2:4705586/93‑1 (MQ=255)
gTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTg > 2:4483540/1‑93 (MQ=255)
tAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGa > 1:3199696/1‑93 (MQ=255)
tAGGAGGCTTGCCCTTGATGTTGCTGCACGCGCGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGa > 1:2784453/1‑93 (MQ=255)
ggaggCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGAtt < 2:2714622/93‑1 (MQ=255)
ggaggCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGAtt > 2:842162/1‑93 (MQ=255)
ggaggCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGAtt < 1:37953/93‑1 (MQ=255)
ggaggCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGACTGAtt > 1:2940436/1‑93 (MQ=255)
gaggCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCTGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTg > 2:3502939/1‑93 (MQ=255)
ttGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGAcccc > 2:2570009/1‑93 (MQ=255)
ttGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGAcccc < 1:4681898/93‑1 (MQ=255)
tGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGAccccc < 2:750605/93‑1 (MQ=255)
ttGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGAc > 2:1491725/1‑93 (MQ=255)
tGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGAcc > 1:4819104/1‑93 (MQ=255)
tGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCTTGATTGACCCCCGCGACCTGa < 1:424487/93‑1 (MQ=255)
tGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGa > 1:3494292/1‑93 (MQ=255)
gTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAg < 1:6107397/93‑1 (MQ=255)
ttGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAgc > 1:3394800/1‑93 (MQ=255)
ttGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAgc > 2:3518202/1‑93 (MQ=255)
ctgcACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAgccgc > 2:5620577/1‑93 (MQ=255)
ctgcACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAgccgc < 2:2916422/93‑1 (MQ=255)
tgcACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAgccgcc < 1:182567/93‑1 (MQ=255)
tgcACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAgccgcc > 1:2524422/1‑93 (MQ=255)
tgcACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAgccgcc < 1:83345/93‑1 (MQ=255)
tgcACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAgccgcc < 1:4795314/93‑1 (MQ=255)
tgcACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAAAGGCCTGATTGAACCCCGCGACCTGAgccgcc > 2:5531243/1‑93 (MQ=255)
gcACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCt < 2:4148422/93‑1 (MQ=255)
cACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTg > 1:1106630/1‑93 (MQ=255)
aCGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGa < 2:1977450/93‑1 (MQ=255)
cgcgGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGAc < 2:2497623/93‑1 (MQ=255)
ccgGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACt < 1:2171462/92‑1 (MQ=255)
gggCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACttt < 1:1471804/93‑1 (MQ=255)
gggCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACttt < 2:1034947/93‑1 (MQ=255)
ccATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCa < 1:184812/93‑1 (MQ=255)
ccATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCa > 2:3187659/1‑93 (MQ=255)
atcatTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAAc > 2:2635178/1‑93 (MQ=255)
catTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCa > 2:5301709/1‑93 (MQ=255)
catTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCa < 1:4055326/93‑1 (MQ=255)
catTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCa < 2:4791479/93‑1 (MQ=255)
atTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACTGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAt > 2:6203726/1‑93 (MQ=255)
atTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAt < 1:3977290/93‑1 (MQ=255)
atTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAt > 1:5528372/1‑93 (MQ=255)
atTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAt < 2:1328385/93‑1 (MQ=255)
atTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAt > 2:4207704/1‑93 (MQ=255)
ttAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATg > 1:1929167/1‑93 (MQ=255)
ttAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATg > 1:2663126/1‑93 (MQ=255)
tAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGc < 2:418671/93‑1 (MQ=255)
aaTGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCg > 1:1822950/1‑93 (MQ=255)
aTGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGa > 2:4445327/1‑93 (MQ=255)
aTGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGa > 2:3062526/1‑93 (MQ=255)
tgtgGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGAc > 1:1840114/1‑93 (MQ=255)
tgtgGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGAc < 2:1546604/93‑1 (MQ=255)
tgGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGAccc > 2:116091/1‑93 (MQ=255)
ggCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCa < 1:86508/93‑1 (MQ=255)
ggCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCa > 1:2505156/1‑93 (MQ=255)
ggCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCa > 1:2693476/1‑93 (MQ=255)
gCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGCCCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCAt < 2:534416/93‑1 (MQ=255)
gCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCAt < 1:446141/93‑1 (MQ=255)
gCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCAt > 2:202767/1‑93 (MQ=255)
cATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACAGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCAtt < 2:5850757/93‑1 (MQ=255)
tCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTgc < 1:1502158/93‑1 (MQ=255)
tCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTgc < 1:5058176/93‑1 (MQ=255)
tCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTCAGCCGCCTGACTTTGCAACCATGCGACCACTTgc > 2:1893831/1‑93 (MQ=255)
cTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTgcg > 1:3658796/1‑93 (MQ=255)
ttCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTgcgg > 1:4940840/1‑93 (MQ=255)
ttCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTgcgg > 2:5203003/1‑93 (MQ=255)
tCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTgcggc < 1:6294012/93‑1 (MQ=255)
ggAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGa < 2:1105509/93‑1 (MQ=255)
gAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGaa > 2:3088382/1‑93 (MQ=255)
aCCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGGCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAgg > 1:1347364/1‑93 (MQ=255)
aCCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAgg < 1:2734940/93‑1 (MQ=255)
aCCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAgg > 2:5155971/1‑93 (MQ=255)
ccGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGgag < 2:3711770/93‑1 (MQ=255)
cGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGNNANCNTGCGACCCATTGCGGNGAAGgaga > 2:4892525/1‑93 (MQ=255)
cGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGgaga < 1:1255791/93‑1 (MQ=255)
gCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGaa < 2:6260283/93‑1 (MQ=255)
gCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGaa < 1:3859746/93‑1 (MQ=255)
cAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAAc < 1:6195299/93‑1 (MQ=255)
aGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACt > 1:5318426/1‑93 (MQ=255)
aGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACt > 2:1250230/1‑93 (MQ=255)
aGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACt < 1:4130130/93‑1 (MQ=255)
gcgcTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTgg < 2:1798443/93‑1 (MQ=255)
gcgcTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTgg > 2:3531357/1‑93 (MQ=255)
cgcTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGc > 2:380538/1‑93 (MQ=255)
gcTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCg < 2:4260889/93‑1 (MQ=255)
gcTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCg > 1:2062025/1‑93 (MQ=255)
gcTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCg > 2:524780/1‑93 (MQ=255)
cTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCgg > 1:4395665/1‑93 (MQ=255)
ttCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGt < 1:2399015/93‑1 (MQ=255)
tCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTa > 2:770930/1‑93 (MQ=255)
tCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTa < 2:5235476/93‑1 (MQ=255)
acacGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCt > 1:2933688/1‑93 (MQ=255)
acacGTACAGCGGCCAGAATGACCGCCGCGGCCTGAACCACCTGACTTTGCAACCATGCGACCCATTGCGACATAGGAGAACTGGCGGTAGCt < 2:6304002/93‑1 (MQ=255)
acGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGc > 2:5451191/1‑93 (MQ=255)
cGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGCa > 1:6046936/1‑93 (MQ=255)
cGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGGAGCTGCa > 1:3065487/1‑93 (MQ=255)
ttCAACGGCCTGATTGACCCCCGCGACCTCAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGGAcc > 1:5891184/1‑93 (MQ=255)
|
CCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAATGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGCACC > NC_000913/1401407‑1401584
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACACCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAATGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGCACCCATCA > NC_000913/1401404‑1401589
|
ACACCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAAC < SRR4302533.4796199/94‑1 (MQ=60)
ACACCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAAC < SRR4302533.5030619/94‑1 (MQ=60)
ACACCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAAC > SRR4302533.805024/1‑94 (MQ=60)
CACCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACG > SRR4302533.1064523/1‑94 (MQ=60)
CACCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACG < SRR4302533.1394666/94‑1 (MQ=60)
ACCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGG > SRR4302533.5130619/1‑94 (MQ=60)
CGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTG > SRR4302533.4348868/1‑94 (MQ=60)
GTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGA > SRR4302533.3219386/1‑94 (MQ=60)
GTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGCGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGA > SRR4302533.2801561/1‑94 (MQ=60)
TAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGAT > SRR4302533.5856528/1‑94 (MQ=60)
AGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATT > SRR4302533.2958395/1‑94 (MQ=60)
AGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATT < SRR4302533.3338051/94‑1 (MQ=60)
AGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGACTGATT > SRR4302533.2958396/1‑94 (MQ=60)
GGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTG < SRR4302533.38203/94‑1 (MQ=60)
GGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACC < SRR4302533.648418/94‑1 (MQ=60)
GGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACC < SRR4302533.3860698/94‑1 (MQ=60)
GCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCC > SRR4302533.6260364/1‑94 (MQ=60)
TTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCC < SRR4302533.2259515/94‑1 (MQ=60)
TTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCC < SRR4302533.4710267/94‑1 (MQ=60)
CCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCG > SRR4302533.2251512/1‑94 (MQ=60)
CCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCG > SRR4302533.1253694/1‑94 (MQ=60)
CCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGA > SRR4302533.3264672/1‑94 (MQ=60)
CCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCAGCGA > SRR4302533.4433914/1‑94 (MQ=60)
CTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTGCAACGGCCTGATTGACCCCCGCGAC > SRR4302533.6124040/1‑94 (MQ=60)
TTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACC > SRR4302533.4848310/1‑94 (MQ=60)
TGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCT > SRR4302533.378145/1‑94 (MQ=60)
TGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCT > SRR4302533.3510501/1‑94 (MQ=60)
GATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTG > SRR4302533.2805119/1‑94 (MQ=60)
GATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTG > SRR4302533.5468458/1‑94 (MQ=60)
ATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGA > SRR4302533.3515846/1‑94 (MQ=60)
ATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGA < SRR4302533.1266320/94‑1 (MQ=60)
TGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCTTGATTGACCCCCGCGACCTGAG < SRR4302533.427023/94‑1 (MQ=60)
GTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGC > SRR4302533.3415767/1‑94 (MQ=60)
GTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGC < SRR4302533.6144271/94‑1 (MQ=60)
TTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCC < SRR4302533.268771/94‑1 (MQ=60)
GCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGC < SRR4302533.2514926/94‑1 (MQ=60)
GCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGC < SRR4302533.2747043/94‑1 (MQ=60)
CTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCC > SRR4302533.4131724/1‑94 (MQ=60)
CTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCC > SRR4302533.2539970/1‑94 (MQ=60)
CTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCC > SRR4302533.1508266/1‑94 (MQ=60)
TGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCT < SRR4302533.83874/94‑1 (MQ=60)
TGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCT < SRR4302533.183702/94‑1 (MQ=60)
TGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCT < SRR4302533.4824363/94‑1 (MQ=60)
GCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTG < SRR4302533.362416/94‑1 (MQ=60)
GCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTG > SRR4302533.1113192/1‑94 (MQ=60)
GCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTG < SRR4302533.1539030/94‑1 (MQ=60)
CACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCTGCCTGA > SRR4302533.4641109/1‑94 (MQ=60)
GCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTT < SRR4302533.2759270/94‑1 (MQ=60)
CCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTT < SRR4302533.2184816/94‑1 (MQ=60)
GGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTG < SRR4302533.1480701/94‑1 (MQ=60)
GGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTG > SRR4302533.5055889/1‑94 (MQ=60)
CCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAA < SRR4302533.5985276/94‑1 (MQ=60)
CCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAA < SRR4302533.185961/94‑1 (MQ=60)
CATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAT > SRR4302533.5088946/1‑94 (MQ=60)
CATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAT > SRR4302533.5561751/1‑94 (MQ=60)
CATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAT < SRR4302533.4080017/94‑1 (MQ=60)
CATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCAT < SRR4302533.1872433/94‑1 (MQ=60)
ATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATG < SRR4302533.4001507/94‑1 (MQ=60)
ATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATG < SRR4302533.4843900/94‑1 (MQ=60)
ATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATG > SRR4302533.1940938/1‑94 (MQ=60)
ATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATG > SRR4302533.2679476/1‑94 (MQ=60)
TTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGC < SRR4302533.1389161/94‑1 (MQ=60)
TAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCG > SRR4302533.1834085/1‑94 (MQ=60)
ATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGAC > SRR4302533.1851334/1‑94 (MQ=60)
TGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCA > SRR4302533.2520600/1‑94 (MQ=60)
TGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCA > SRR4302533.2709978/1‑94 (MQ=60)
GGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCAT < SRR4302533.6183824/94‑1 (MQ=60)
GGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCAT < SRR4302533.87063/94‑1 (MQ=60)
GCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATT < SRR4302533.1838691/94‑1 (MQ=60)
GCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATT < SRR4302533.448812/94‑1 (MQ=60)
GCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATT < SRR4302533.4815169/94‑1 (MQ=60)
CATCTTCGGACCCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTG < SRR4302533.2999103/94‑1 (MQ=60)
ATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGC < SRR4302533.2128210/94‑1 (MQ=60)
TCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCG < SRR4302533.5088743/94‑1 (MQ=60)
TCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCG > SRR4302533.3681292/1‑94 (MQ=60)
TCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCG > SRR4302533.3179127/1‑94 (MQ=60)
TCTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCG < SRR4302533.1511213/94‑1 (MQ=60)
CTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGG > SRR4302533.264768/1‑94 (MQ=60)
CTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGG > SRR4302533.4970751/1‑94 (MQ=60)
CTTCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGG > SRR4302533.4047493/1‑94 (MQ=60)
TCGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCG < SRR4302533.6331533/94‑1 (MQ=60)
CGGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGA > SRR4302533.863789/1‑94 (MQ=60)
GGAACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAA > SRR4302533.3939397/1‑94 (MQ=60)
AACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGGCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGG > SRR4302533.1355471/1‑94 (MQ=60)
AACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGG < SRR4302533.1945144/94‑1 (MQ=60)
ACCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGA < SRR4302533.2751716/94‑1 (MQ=60)
CCCGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAG < SRR4302533.1834962/94‑1 (MQ=60)
CGCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAA < SRR4302533.1263300/94‑1 (MQ=60)
GCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAAC < SRR4302533.3883310/94‑1 (MQ=60)
GCAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAAC > SRR4302533.489990/1‑94 (MQ=60)
CAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACT > SRR4302533.5350298/1‑94 (MQ=60)
CAGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACT < SRR4302533.6232470/94‑1 (MQ=60)
AGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTG < SRR4302533.5338748/94‑1 (MQ=60)
AGGCGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTG < SRR4302533.4155200/94‑1 (MQ=60)
CGCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCG > SRR4302533.2074742/1‑94 (MQ=60)
GCTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGG > SRR4302533.4422203/1‑94 (MQ=60)
CTTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGT > SRR4302533.6157988/1‑94 (MQ=60)
TTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTA < SRR4302533.2413827/94‑1 (MQ=60)
TTCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTA < SRR4302533.4665452/94‑1 (MQ=60)
TCAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAG > SRR4302533.1858924/1‑94 (MQ=60)
CAACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGC > SRR4302533.4202520/1‑94 (MQ=60)
AACACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCT > SRR4302533.2951626/1‑94 (MQ=60)
ACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGCA > SRR4302533.6083578/1‑94 (MQ=60)
ACGTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGGAGCTGCA > SRR4302533.3084316/1‑94 (MQ=60)
GTTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGACGGAGAACTCGCGGTAGCTGCACC > SRR4302533.89513/1‑94 (MQ=60)
GTTCAACGGCCTGATTGACCCCCGCGACCTCAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGGACC > SRR4302533.5926771/1‑94 (MQ=60)
TTCAACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGCACCC < SRR4302533.2532034/94‑1 (MQ=60)
ACGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGCACCCATCA < SRR4302533.4850858/94‑1 (MQ=60)
|
ACACCACGTAGGAGGCTTGCCCTTGATGTTGCTGCACGCGGGCCATCATTAATGTGGCATCTTCGGAACCCGCAGGCGCTTCAACACGTTCAATGGCCTGATTGACCCCCGCGACCTGAGCCGCCTGACTTTGCAACCATGCGACCCATTGCGGCGAAGGAGAACTGGCGGTAGCTGCACCCATCA > NC_000913/1401404‑1401589
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
