Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,490,510 |
C→T |
S6L (TCA→TTA) |
trg → |
methyl‑accepting chemotaxis protein III |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,490,510 | 0 | C | T | 100.0%
| 814.9
/ NA
| 216 | S6L (TCA→TTA) | trg | methyl‑accepting chemotaxis protein III |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (113/103); total (113/103) |
Only 100 of 225 total aligned reads displayed.
TTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT > NC_000913/1490420‑1490598
|
tttGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTtac < 2:4609163/93‑1 (MQ=255)
ttGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTtaca < 2:1404572/93‑1 (MQ=255)
ttGGTCATAAGTAATTACCGTCAAGCGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTtaca < 1:6089375/93‑1 (MQ=255)
tGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAg < 2:491739/93‑1 (MQ=255)
tgTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGc < 1:2020414/92‑1 (MQ=255)
gTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCg > 2:2163709/1‑93 (MQ=255)
gTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCg > 2:5443871/1‑93 (MQ=255)
tCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGa < 2:3518618/93‑1 (MQ=255)
cATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAt > 2:914450/1‑93 (MQ=255)
cATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAt > 2:5929925/1‑93 (MQ=255)
aTAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAtt > 1:750683/1‑93 (MQ=255)
tAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTa < 1:4456434/93‑1 (MQ=255)
tAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTa > 1:3423121/1‑93 (MQ=255)
tAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTa > 1:2433440/1‑93 (MQ=255)
aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg < 2:5807732/93‑1 (MQ=255)
aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg < 2:1671123/93‑1 (MQ=255)
aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg < 2:4824650/93‑1 (MQ=255)
aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg < 2:3857254/93‑1 (MQ=255)
aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg > 1:4493296/1‑93 (MQ=255)
aGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAgg > 2:3392296/1‑93 (MQ=255)
gTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGt < 1:640806/93‑1 (MQ=255)
gTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGt > 2:6079389/1‑93 (MQ=255)
gTAATCACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGGAACTAAGACAACTCCCTTACAGCGATTAGGt > 1:6307656/1‑93 (MQ=255)
tAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtt < 1:1213823/93‑1 (MQ=255)
tAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtt > 2:5031613/1‑93 (MQ=255)
aTTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttt > 2:5156716/1‑93 (MQ=255)
ttACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAGCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGttttt < 2:2689339/93‑1 (MQ=255)
ttACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGttttt < 1:2523401/93‑1 (MQ=255)
ttACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGttttt > 2:3118064/1‑93 (MQ=255)
ttACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGttttt > 1:3917239/1‑93 (MQ=255)
tACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttttt < 2:1954947/93‑1 (MQ=255)
tACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttttt < 2:778940/93‑1 (MQ=255)
aCCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTg > 1:1178575/1‑93 (MQ=255)
ccGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGc > 1:5677808/1‑93 (MQ=255)
cGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGca < 1:3016261/93‑1 (MQ=255)
gTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcat < 2:3025224/93‑1 (MQ=255)
gTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcat > 1:5862383/1‑93 (MQ=255)
ggCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacatc < 1:1767559/92‑1 (MQ=255)
gCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacatca < 1:1024099/93‑1 (MQ=255)
gCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacatca < 1:4769460/93‑1 (MQ=255)
ccGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAg > 2:2325292/1‑93 (MQ=255)
cGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAgg > 1:5519842/1‑93 (MQ=255)
gATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggt > 2:5239165/1‑93 (MQ=255)
gATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggt < 2:2735468/93‑1 (MQ=255)
aTGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggtt < 1:944928/93‑1 (MQ=255)
aTGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggtt > 1:678079/1‑93 (MQ=255)
aTGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggtt < 1:4625849/93‑1 (MQ=255)
tGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttg > 1:2242556/1‑93 (MQ=255)
tGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttg < 2:1267091/93‑1 (MQ=255)
gACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttgg < 2:1498064/93‑1 (MQ=255)
aCTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttggt < 1:822807/93‑1 (MQ=255)
aCTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttggt < 2:742192/93‑1 (MQ=255)
tttCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTc < 1:12925/93‑1 (MQ=255)
ttCTATCAGGAGTAACCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTcc < 2:4222247/93‑1 (MQ=255)
ttCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTcc < 2:356817/93‑1 (MQ=255)
ttCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGGTcc > 2:1062995/1‑93 (MQ=255)
ttCTATCAGGAGCAAACCTGGACGAGAGACAACGGGAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTcc > 2:3638028/1‑93 (MQ=255)
cTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGt < 1:2581067/93‑1 (MQ=255)
tATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGtt < 2:4782444/93‑1 (MQ=255)
aTCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTa < 1:5115722/93‑1 (MQ=255)
aTCAGGAGTAAACCTGGACGAGAGACAACGGCAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGCTCCGTTa > 2:3804789/1‑93 (MQ=255)
tCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAt > 1:2347133/1‑93 (MQ=255)
cAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAtt > 1:5017809/1‑93 (MQ=255)
aGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAttt < 1:1555392/93‑1 (MQ=255)
gTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTACGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCt < 1:4552879/93‑1 (MQ=255)
gTAAACCTGGACGACAGACAACGGTAATGAATACAACTCCCTTACAGCGATTTGGTTTCTTGCATCACATCAGGTTGGTTCCGTTATTTGTCt > 2:804002/1‑93 (MQ=255)
tAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTg < 1:3714230/93‑1 (MQ=255)
aaCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCa < 2:1302013/93‑1 (MQ=255)
aCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAt > 2:1159071/1‑93 (MQ=255)
aCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAt > 2:55285/1‑93 (MQ=255)
cTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTc > 1:1047249/1‑93 (MQ=255)
cTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTc > 2:2116191/1‑93 (MQ=255)
cTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTc < 2:4015914/93‑1 (MQ=255)
tGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCt > 1:4039867/1‑93 (MQ=255)
tGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCt > 2:155458/1‑93 (MQ=255)
ggACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTa > 1:31798/1‑93 (MQ=255)
gACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAg < 1:1835309/93‑1 (MQ=255)
gACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAg > 1:3371022/1‑93 (MQ=255)
cGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGc > 2:2487103/1‑93 (MQ=255)
cGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGc < 2:5288537/93‑1 (MQ=255)
gagagaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCg < 2:5712842/93‑1 (MQ=255)
agaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTa < 2:4729738/93‑1 (MQ=255)
agaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTa > 1:1602218/1‑93 (MQ=255)
gaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTAt < 2:3709985/93‑1 (MQ=255)
cAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCt < 1:4015788/93‑1 (MQ=255)
cAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCt < 1:5692291/93‑1 (MQ=255)
aaCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCtt > 2:3329415/1‑93 (MQ=255)
aCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTa > 1:3608837/1‑93 (MQ=255)
aCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTa > 2:6170190/1‑93 (MQ=255)
ggTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGt < 1:5991809/93‑1 (MQ=255)
aaTGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCt > 2:4178209/1‑93 (MQ=255)
aaTGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCt > 1:3097905/1‑93 (MQ=255)
tGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTAt > 2:1850122/1‑93 (MQ=255)
aaTACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTc > 1:5160168/1‑93 (MQ=255)
aCAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCa < 1:5460823/93‑1 (MQ=255)
cAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAt < 1:3517059/93‑1 (MQ=255)
aaCTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAtt > 1:1538416/1‑93 (MQ=255)
aaCTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAtt < 1:6151631/93‑1 (MQ=255)
tCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAg > 2:546453/1‑93 (MQ=255)
tCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAg < 1:3299559/93‑1 (MQ=255)
|
TTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT > NC_000913/1490420‑1490598
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTTTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCAGC > NC_000913/1490417‑1490603
|
GTTTTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTT > SRR4302533.1441851/1‑94 (MQ=60)
TTTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTAC < SRR4302533.3304905/94‑1 (MQ=60)
TTTTGTCAGAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACGCCCTTACA < SRR4302533.4505502/94‑1 (MQ=60)
TTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACA < SRR4302533.5283454/94‑1 (MQ=60)
TTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACA < SRR4302533.1630059/94‑1 (MQ=60)
TTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAG < SRR4302533.3383569/94‑1 (MQ=60)
TTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAG < SRR4302533.2531567/94‑1 (MQ=60)
TTGGTCATAAGTAATTACCGTCAAGCGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAG < SRR4302533.6126184/94‑1 (MQ=60)
TGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCG < SRR4302533.2032857/94‑1 (MQ=60)
GGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCG > SRR4302533.2176620/1‑94 (MQ=60)
CATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATT > SRR4302533.755104/1‑94 (MQ=60)
ATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTA > SRR4302533.3444266/1‑94 (MQ=60)
ATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTA < SRR4302533.2264869/94‑1 (MQ=60)
ATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTA > SRR4302533.2448475/1‑94 (MQ=60)
TAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAG > SRR4302533.4520509/1‑94 (MQ=60)
TAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAG < SRR4302533.4483382/94‑1 (MQ=60)
AGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGT < SRR4302533.6054648/94‑1 (MQ=60)
AGTAATCACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGGAACTAAGACAACTCCCTTACAGCGATTAGGT > SRR4302533.6345480/1‑94 (MQ=60)
GTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTT < SRR4302533.803255/94‑1 (MQ=60)
GTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTT < SRR4302533.644573/94‑1 (MQ=60)
TAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTT > SRR4302533.813378/1‑94 (MQ=60)
TAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTT < SRR4302533.1221118/94‑1 (MQ=60)
AATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTT > SRR4302533.3198424/1‑94 (MQ=60)
ATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTT > SRR4302533.122092/1‑94 (MQ=60)
ATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTT > SRR4302533.3941163/1‑94 (MQ=60)
TTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTT < SRR4302533.2538946/94‑1 (MQ=60)
TACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTG > SRR4302533.1185652/1‑94 (MQ=60)
ACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGC > SRR4302533.1817121/1‑94 (MQ=60)
ACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGC > SRR4302533.5712097/1‑94 (MQ=60)
ACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGC < SRR4302533.3683378/94‑1 (MQ=60)
ACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGC > SRR4302533.634878/1‑94 (MQ=60)
CGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCAT < SRR4302533.3034709/94‑1 (MQ=60)
CGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCAT > SRR4302533.5897828/1‑94 (MQ=60)
GGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCA < SRR4302533.1778320/94‑1 (MQ=60)
GCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAG < SRR4302533.4798369/94‑1 (MQ=60)
GCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAG < SRR4302533.1030120/94‑1 (MQ=60)
CCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGG > SRR4302533.5553172/1‑94 (MQ=60)
CGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGT > SRR4302533.4007173/1‑94 (MQ=60)
CGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGT > SRR4302533.6140207/1‑94 (MQ=60)
CGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGT > SRR4302533.6001712/1‑94 (MQ=60)
GATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTT > SRR4302533.682088/1‑94 (MQ=60)
GATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTT < SRR4302533.2421955/94‑1 (MQ=60)
ATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTG > SRR4302533.4228090/1‑94 (MQ=60)
ATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTG < SRR4302533.4653885/94‑1 (MQ=60)
ATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTG > SRR4302533.4785510/1‑94 (MQ=60)
ATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTG < SRR4302533.950485/94‑1 (MQ=60)
ATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTG > SRR4302533.2256418/1‑94 (MQ=60)
GACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGT > SRR4302533.4575345/1‑94 (MQ=60)
ACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTT < SRR4302533.827635/94‑1 (MQ=60)
TTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCC < SRR4302533.13021/94‑1 (MQ=60)
TTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCG > SRR4302533.1163861/1‑94 (MQ=60)
CTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTT < SRR4302533.2596946/94‑1 (MQ=60)
CTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTT > SRR4302533.4758578/1‑94 (MQ=60)
ATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAT > SRR4302533.2361657/1‑94 (MQ=60)
ATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAT < SRR4302533.5146640/94‑1 (MQ=60)
TCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATT > SRR4302533.5048203/1‑94 (MQ=60)
TCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATT < SRR4302533.2012561/94‑1 (MQ=60)
CAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTT > SRR4302533.3361165/1‑94 (MQ=60)
AGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTG < SRR4302533.1564755/94‑1 (MQ=60)
GGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGC < SRR4302533.5810978/94‑1 (MQ=60)
AGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCT > SRR4302533.2927391/1‑94 (MQ=60)
GTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTG < SRR4302533.5528930/94‑1 (MQ=60)
GTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTG < SRR4302533.270998/94‑1 (MQ=60)
GTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTACGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTG < SRR4302533.4580490/94‑1 (MQ=60)
GTAAACCTGGACGAGAGACAACGGTAATGAATAAAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTG < SRR4302533.1770162/94‑1 (MQ=60)
TAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGC < SRR4302533.3737034/94‑1 (MQ=60)
TAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGC < SRR4302533.2340299/94‑1 (MQ=60)
AAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCA > SRR4302533.5724877/1‑94 (MQ=60)
AACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAT > SRR4302533.1335990/1‑94 (MQ=60)
CCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTC > SRR4302533.1053403/1‑94 (MQ=60)
CTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCT > SRR4302533.4064452/1‑94 (MQ=60)
TGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTA > SRR4302533.32018/1‑94 (MQ=60)
GGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAG > SRR4302533.3391840/1‑94 (MQ=60)
GGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAG < SRR4302533.3835366/94‑1 (MQ=60)
GGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAG > SRR4302533.3448491/1‑94 (MQ=60)
GACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGG < SRR4302533.1846506/94‑1 (MQ=60)
CGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGATTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCG > SRR4302533.3406285/1‑94 (MQ=60)
GAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGG > SRR4302533.5307273/1‑94 (MQ=60)
GAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGG > SRR4302533.5143680/1‑94 (MQ=60)
GAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTA > SRR4302533.1611921/1‑94 (MQ=60)
AGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTAT < SRR4302533.6246955/94‑1 (MQ=60)
ACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCT > SRR4302533.1293307/1‑94 (MQ=60)
ACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCT < SRR4302533.723526/94‑1 (MQ=60)
ACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCT < SRR4302533.1577067/94‑1 (MQ=60)
CAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTT < SRR4302533.3091765/94‑1 (MQ=60)
CAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTT < SRR4302533.4040239/94‑1 (MQ=60)
CAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTT < SRR4302533.5726669/94‑1 (MQ=60)
AACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTA < SRR4302533.1559746/94‑1 (MQ=60)
AACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTA > SRR4302533.3631053/1‑94 (MQ=60)
CGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGT > SRR4302533.3611919/1‑94 (MQ=60)
GGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTT < SRR4302533.6028103/94‑1 (MQ=60)
GGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTT > SRR4302533.5577920/1‑94 (MQ=60)
TAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCT > SRR4302533.5188319/1‑94 (MQ=60)
TAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCT > SRR4302533.3116950/1‑94 (MQ=60)
TAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCT < SRR4302533.884669/94‑1 (MQ=60)
AATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCTTGCATTCTAGGCGGTATCTTAGTTCTA > SRR4302533.3713728/1‑94 (MQ=60)
AATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTTGGCGGTATCTTAGTTCTA > SRR4302533.2591884/1‑94 (MQ=60)
ATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTAT > SRR4302533.1223332/1‑94 (MQ=60)
GAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTC > SRR4302533.5191310/1‑94 (MQ=60)
AATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCG < SRR4302533.5770149/94‑1 (MQ=60)
AATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCG > SRR4302533.4269148/1‑94 (MQ=60)
ATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGC < SRR4302533.4828325/94‑1 (MQ=60)
TACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCA > SRR4302533.6240456/1‑94 (MQ=60)
ACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAT > SRR4302533.4042225/1‑94 (MQ=60)
ACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAT < SRR4302533.5493723/94‑1 (MQ=60)
CAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATT > SRR4302533.1547681/1‑94 (MQ=60)
CAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATT < SRR4302533.3538741/94‑1 (MQ=60)
AACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTA > SRR4302533.4633484/1‑94 (MQ=60)
AACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTA < SRR4302533.6188653/94‑1 (MQ=60)
TCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT > SRR4302533.3256763/1‑94 (MQ=60)
TCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT > SRR4302533.656259/1‑94 (MQ=60)
TCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT < SRR4302533.3319921/94‑1 (MQ=60)
CCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTT < SRR4302533.1043804/94‑1 (MQ=60)
CCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTC > SRR4302533.1568027/1‑94 (MQ=60)
CTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCA < SRR4302533.1133479/94‑1 (MQ=60)
CTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCA < SRR4302533.2879056/94‑1 (MQ=60)
TTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCAG < SRR4302533.3022183/94‑1 (MQ=60)
TACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCAGC < SRR4302533.239853/94‑1 (MQ=60)
TACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCAGC > SRR4302533.4004586/1‑94 (MQ=60)
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GTTTTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCAGC > NC_000913/1490417‑1490603
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
