Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,493,567 |
T→C |
F86L (TTT→CTT) |
b1423 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,493,567 | 0 | T | C | 100.0%
| 583.7
/ NA
| 184 | F86L (TTT→CTT) | b1423 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/88); total (96/88) |
Only 100 of 192 total aligned reads displayed.
AATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGAT > NC_000913/1493477‑1493656
|
aaTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGctt < 2:1760999/93‑1 (MQ=255)
aTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTg < 2:1710573/93‑1 (MQ=255)
aTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTg > 2:2462576/1‑93 (MQ=255)
tGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGc < 1:4807868/93‑1 (MQ=255)
tGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGc < 2:1869340/93‑1 (MQ=255)
gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt > 1:2898946/1‑93 (MQ=255)
gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt > 2:1377398/1‑93 (MQ=255)
aCGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTa < 1:201731/93‑1 (MQ=255)
cGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTAt > 2:217796/1‑93 (MQ=255)
gAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATg < 2:5838671/93‑1 (MQ=255)
gCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATggg > 2:472138/1‑93 (MQ=255)
gCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATggg < 1:4284100/93‑1 (MQ=255)
tGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGa > 1:1880867/1‑93 (MQ=255)
tGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGa < 1:574420/93‑1 (MQ=255)
gcgACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTa > 1:2338745/1‑93 (MQ=255)
gACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTAcc < 2:630824/93‑1 (MQ=255)
aCTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTAccc > 2:1007124/1‑93 (MQ=255)
cTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCg < 2:6070395/93‑1 (MQ=255)
cTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCg < 2:908341/93‑1 (MQ=255)
tGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCgg > 2:2429897/1‑93 (MQ=255)
tGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCgg > 2:5471695/1‑93 (MQ=255)
gAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGt < 1:697311/93‑1 (MQ=255)
aaTGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTg > 2:3534612/1‑93 (MQ=255)
gTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGc < 1:5175653/93‑1 (MQ=255)
aCGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTa > 1:1017765/1‑93 (MQ=255)
aCGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTa < 2:6036045/93‑1 (MQ=255)
cGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTAc < 1:4705127/93‑1 (MQ=255)
cGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTAc < 2:5649556/93‑1 (MQ=255)
gTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACg > 2:3388482/1‑93 (MQ=255)
tCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACgt < 1:1727272/93‑2 (MQ=255)
tCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGa < 2:1493831/93‑1 (MQ=255)
tCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGa < 2:2873341/93‑1 (MQ=255)
tCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGa > 2:4576280/1‑93 (MQ=255)
cATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAt < 1:2584719/93‑1 (MQ=255)
cATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAt > 2:5173057/1‑93 (MQ=255)
aTGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtc > 1:3081525/1‑93 (MQ=255)
aTGGGGCGATGCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtc < 2:5465893/93‑1 (MQ=255)
ggggCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctc > 1:1398876/1‑93 (MQ=255)
gggCGATTCGCGTTGGGACTGCACAAGAGCTTGCAACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctct < 1:1917656/93‑1 (MQ=255)
ggCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctctc < 2:4653894/93‑1 (MQ=255)
gATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgca < 1:4339057/93‑1 (MQ=255)
gATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgca < 2:16076/93‑1 (MQ=255)
aTTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcag > 1:6202634/1‑93 (MQ=255)
aTTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcag > 1:2151688/1‑93 (MQ=255)
ttCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcagg > 2:4107401/1‑93 (MQ=255)
cgcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggca < 1:455427/93‑1 (MQ=255)
cgcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggca < 1:1624827/93‑1 (MQ=255)
gcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggcag > 2:5504672/1‑93 (MQ=255)
gcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggcag < 1:531840/93‑1 (MQ=255)
cgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGcaggcagg < 2:2997254/93‑1 (MQ=255)
cgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGcaggcagg < 2:5689750/93‑1 (MQ=255)
gTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAggg < 1:2226705/93‑1 (MQ=255)
gTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAggg < 2:3068022/93‑1 (MQ=255)
ttGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAgggg > 1:3914273/1‑93 (MQ=255)
ttGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAgggg > 1:1182840/1‑93 (MQ=255)
gggACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTg > 1:3198426/1‑93 (MQ=255)
gACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGcc > 1:102382/1‑93 (MQ=255)
aCTGCACAAGAGCTTGCTGCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCg < 1:1251518/93‑1 (MQ=255)
aCTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCg > 1:4627944/1‑93 (MQ=255)
cTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCgg > 2:2620234/1‑93 (MQ=255)
cTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCgg < 2:6008044/93‑1 (MQ=255)
cTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCgg < 1:4307529/93‑1 (MQ=255)
tGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCggc > 2:3647639/1‑92 (MQ=255)
tGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGt > 1:5505374/1‑93 (MQ=255)
gCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGCGTGCCGGTa > 2:3402100/1‑93 (MQ=255)
acaAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACa > 2:5065896/1‑93 (MQ=255)
acaAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACa < 1:4867980/93‑1 (MQ=255)
acaAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACa > 2:3759868/1‑93 (MQ=255)
caAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAt > 2:4754010/1‑93 (MQ=255)
aaGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAtt < 2:140440/93‑1 (MQ=255)
aaGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAtt < 2:3265473/93‑1 (MQ=255)
agagCTTGCTACTCTTCGGCGGATTCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc < 2:4929571/93‑1 (MQ=255)
agagCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc < 1:3772279/93‑1 (MQ=255)
agagCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc > 1:3329958/1‑93 (MQ=255)
gagCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCg < 1:2391400/93‑1 (MQ=255)
gCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGAc < 2:4259258/93‑1 (MQ=255)
gCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGAc < 2:272308/93‑1 (MQ=255)
gCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGAc < 1:2663909/93‑1 (MQ=255)
cTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACa < 2:3091187/93‑1 (MQ=255)
gCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCa > 2:4505264/1‑93 (MQ=255)
gCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCa > 1:5372077/1‑93 (MQ=255)
cTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAt > 2:2817036/1‑93 (MQ=255)
tACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAtt > 1:3971233/1‑93 (MQ=255)
aCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt > 1:3495740/1‑93 (MQ=255)
aCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt > 2:1328413/1‑93 (MQ=255)
ctctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTc < 2:2023848/93‑1 (MQ=255)
tctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCg > 2:2213578/1‑93 (MQ=255)
tctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCg < 2:3477886/93‑1 (MQ=255)
ttCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGc > 2:5396848/1‑93 (MQ=255)
ttCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGc > 2:1262902/1‑93 (MQ=255)
cggcggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGccc > 2:4437394/1‑93 (MQ=255)
gcggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCAt > 2:5432805/1‑93 (MQ=255)
cggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCAtt < 2:5768422/93‑1 (MQ=255)
ggATGCTTGCCATTATGGGGATGTACCCTGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtg < 2:2078575/93‑1 (MQ=255)
ggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtg > 2:4429215/1‑93 (MQ=255)
gATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtga > 1:1814476/1‑93 (MQ=255)
gATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtga > 1:2847410/1‑93 (MQ=255)
gATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtga < 1:3791737/93‑1 (MQ=255)
gATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGAGGTGCCGGTACATTCGACAGCATTTCGGCCCATtga > 2:5735031/1‑93 (MQ=255)
aTGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtgat < 1:5847091/93‑1 (MQ=255)
|
AATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGAT > NC_000913/1493477‑1493656
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTAAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGATG > NC_000913/1493474‑1493660
|
GTAAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGC > SRR4302533.5735192/1‑94 (MQ=60)
GTAAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGC > SRR4302533.2905948/1‑94 (MQ=60)
AAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTT > SRR4302533.254757/1‑94 (MQ=60)
ATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGC > SRR4302533.2872332/1‑94 (MQ=60)
TGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCC < SRR4302533.4836976/94‑1 (MQ=60)
AGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATT > SRR4302533.2916760/1‑94 (MQ=60)
AGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATT > SRR4302533.238770/1‑94 (MQ=60)
AGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATT > SRR4302533.4623578/1‑94 (MQ=60)
ACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTAT < SRR4302533.203011/94‑1 (MQ=60)
ACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTAT < SRR4302533.173383/94‑1 (MQ=60)
GCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGG < SRR4302533.4309846/94‑1 (MQ=60)
CTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGA < SRR4302533.4432553/94‑1 (MQ=60)
CTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGA > SRR4302533.1892323/1‑94 (MQ=60)
TGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGAT < SRR4302533.3025498/94‑1 (MQ=60)
TGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGAT < SRR4302533.577811/94‑1 (MQ=60)
TGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGAT < SRR4302533.1071759/94‑1 (MQ=60)
GGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATG > SRR4302533.1380398/1‑94 (MQ=60)
CGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTA > SRR4302533.2353227/1‑94 (MQ=60)
GCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGCTGGAC > SRR4302533.3785831/1‑94 (MQ=60)
CGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGCTGTACC > SRR4302533.1232628/1‑94 (MQ=60)
CGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACC > SRR4302533.1419650/1‑94 (MQ=60)
GACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCC > SRR4302533.1994317/1‑94 (MQ=60)
GACTGAATGTTGAACGCCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCC > SRR4302533.5385947/1‑94 (MQ=60)
ACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCG < SRR4302533.3808098/94‑1 (MQ=60)
CTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGG > SRR4302533.1914866/1‑94 (MQ=60)
TGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGT > SRR4302533.5210492/1‑94 (MQ=60)
GAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTG < SRR4302533.701436/94‑1 (MQ=60)
AATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGA < SRR4302533.3381540/94‑1 (MQ=60)
ATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAG > SRR4302533.86254/1‑94 (MQ=60)
ATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAG < SRR4302533.2659660/94‑1 (MQ=60)
GTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCT < SRR4302533.5206914/94‑1 (MQ=60)
GTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCT < SRR4302533.4213504/94‑1 (MQ=60)
AACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTA > SRR4302533.1023748/1‑94 (MQ=60)
CGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACG < SRR4302533.4740584/94‑1 (MQ=60)
CGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACG < SRR4302533.4733645/94‑1 (MQ=60)
TCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGTT < SRR4302533.1737754/94‑1 (MQ=60)
CATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATC < SRR4302533.2600611/94‑1 (MQ=60)
CATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATC > SRR4302533.3100432/1‑94 (MQ=60)
TGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTC > SRR4302533.1407307/1‑94 (MQ=60)
GGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTC < SRR4302533.3214164/94‑1 (MQ=60)
GGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCAACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTC < SRR4302533.1929364/94‑1 (MQ=60)
GGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCG > SRR4302533.3275359/1‑94 (MQ=60)
GATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAG < SRR4302533.4365208/94‑1 (MQ=60)
GATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAG > SRR4302533.2164941/1‑94 (MQ=60)
GATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAG > SRR4302533.6239834/1‑94 (MQ=60)
CGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAG < SRR4302533.458150/94‑1 (MQ=60)
CGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAG < SRR4302533.1634667/94‑1 (MQ=60)
GCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGG < SRR4302533.535003/94‑1 (MQ=60)
GTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGG < SRR4302533.2240451/94‑1 (MQ=60)
GTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGG > SRR4302533.3938183/1‑94 (MQ=60)
GTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGG > SRR4302533.1189945/1‑94 (MQ=60)
TGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTG > SRR4302533.3218110/1‑94 (MQ=60)
GGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCC > SRR4302533.103020/1‑94 (MQ=60)
GACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCG > SRR4302533.5627580/1‑94 (MQ=60)
GACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCG < SRR4302533.5124551/94‑1 (MQ=60)
GACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCG > SRR4302533.4655991/1‑94 (MQ=60)
ACTGCACAAGAGCTTGCTGCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGG < SRR4302533.1258996/94‑1 (MQ=60)
CTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGT < SRR4302533.4333455/94‑1 (MQ=60)
CTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGT > SRR4302533.5538594/1‑94 (MQ=60)
CTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGGGCCGGT > SRR4302533.2693770/1‑94 (MQ=60)
CACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACA < SRR4302533.1857195/94‑1 (MQ=60)
ACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAT < SRR4302533.4897479/94‑1 (MQ=60)
AAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTC > SRR4302533.3350540/1‑94 (MQ=60)
AGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCG < SRR4302533.3795402/94‑1 (MQ=60)
GAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGA < SRR4302533.2406165/94‑1 (MQ=60)
GCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACA < SRR4302533.4310426/94‑1 (MQ=60)
GCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACA < SRR4302533.2680262/94‑1 (MQ=60)
CTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAG > SRR4302533.2036609/1‑94 (MQ=60)
TGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCA > SRR4302533.4348405/1‑94 (MQ=60)
TGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCA > SRR4302533.5404352/1‑94 (MQ=60)
GCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTGTTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAT > SRR4302533.5806923/1‑94 (MQ=60)
CTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATT > SRR4302533.3995420/1‑94 (MQ=60)
TACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTT > SRR4302533.3517299/1‑94 (MQ=60)
ACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTC < SRR4302533.1783333/94‑1 (MQ=60)
CCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTGCGACCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGG < SRR4302533.64038/94‑1 (MQ=60)
CTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGC > SRR4302533.4700801/1‑94 (MQ=60)
CTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGGGCCGGTACATTCGACAGCATTTCGGC > SRR4302533.218421/1‑94 (MQ=60)
GCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATT > SRR4302533.387122/1‑94 (MQ=60)
GCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATT < SRR4302533.6165023/94‑1 (MQ=60)
CGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTG > SRR4302533.48864/1‑94 (MQ=60)
GGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGA > SRR4302533.2864932/1‑94 (MQ=60)
GGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGA > SRR4302533.1825553/1‑94 (MQ=60)
GATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGAT < SRR4302533.3814950/94‑1 (MQ=60)
ATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATG < SRR4302533.5882439/94‑1 (MQ=60)
TGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGA < SRR4302533.5465307/94‑1 (MQ=60)
TGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGA > SRR4302533.6346802/1‑94 (MQ=60)
GCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGAT < SRR4302533.5167244/94‑1 (MQ=60)
CTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGATG > SRR4302533.3202838/1‑94 (MQ=60)
CTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGATG > SRR4302533.461861/1‑94 (MQ=60)
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GTAAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGATG > NC_000913/1493474‑1493660
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
