Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,535,627 |
A→G |
R417R (CGT→CGC) |
narY ← |
cryptic nitrate reductase 2 beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,535,627 | 0 | A | G | 100.0%
| 676.2
/ NA
| 209 | R417R (CGT→CGC) | narY | cryptic nitrate reductase 2 beta subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/105); total (104/105) |
Only 100 of 222 total aligned reads displayed.
AGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTG > NC_000913/1535538‑1535716
|
gaTAGCGATACATCTCTTCGACCTTGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCa < 1:2910334/93‑1 (MQ=255)
gaTAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCa > 2:3778297/1‑93 (MQ=255)
aTAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCat < 1:3081382/93‑1 (MQ=255)
tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata < 1:1199870/93‑1 (MQ=255)
tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata > 1:5361857/1‑93 (MQ=255)
tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata > 1:3261980/1‑93 (MQ=255)
tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata < 2:5304253/93‑1 (MQ=255)
gCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCAtata < 1:5463231/93‑1 (MQ=255)
gATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAgg > 1:1908244/1‑92 (MQ=255)
aTACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTg > 2:776413/1‑93 (MQ=255)
aTACATCTCTTCGACCTGGGCGACGCTCAGCCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTg < 1:6214748/93‑1 (MQ=255)
tACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTgg < 2:1458243/93‑1 (MQ=255)
aCATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGgc < 2:1187400/93‑1 (MQ=255)
tctcTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCa > 2:4737860/1‑93 (MQ=255)
tctcTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCa > 2:2732187/1‑93 (MQ=255)
tctTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATc < 1:4432558/93‑1 (MQ=255)
tctTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATc < 2:1218574/93‑1 (MQ=255)
ttCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGGGTATCAGTAAGGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGc > 2:1420254/1‑93 (MQ=255)
gACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcat > 2:1790026/1‑93 (MQ=255)
gACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcat > 1:5558024/1‑93 (MQ=255)
gACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcat > 1:5134512/1‑93 (MQ=255)
aCCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatc > 1:3581325/1‑93 (MQ=255)
aCCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatc > 1:3162751/1‑93 (MQ=255)
ccTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatca > 2:4380863/1‑93 (MQ=255)
ccTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatca < 1:2130029/93‑1 (MQ=255)
ccTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatca > 2:5981502/1‑93 (MQ=255)
cTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatcat < 1:3362034/93‑1 (MQ=255)
cTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTACACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatcat > 2:3323772/1‑93 (MQ=255)
tGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCatcatc < 2:2659476/93‑1 (MQ=255)
gggCGACGCTCAGGCCTACTTCGTCGATGGCACTAGCATCAGTAACGCCTTTCTCGGTTTGTCAGCGCAGATAGGTGCGCATCGCCATCAccc > 2:4681139/1‑93 (MQ=255)
gggCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATcc > 1:1754936/1‑93 (MQ=255)
gCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGt > 1:2676400/1‑93 (MQ=255)
gACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGttt > 2:1494555/1‑93 (MQ=255)
aCGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTc > 2:656406/1‑93 (MQ=255)
cGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCa < 1:2432012/93‑1 (MQ=255)
gCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAg > 2:5606339/1‑93 (MQ=255)
cTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCatc > 2:3328977/1‑91 (MQ=255)
cTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgc < 2:4868302/93‑1 (MQ=255)
cAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcgc < 1:5278669/93‑1 (MQ=255)
cAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcgc > 1:5075248/1‑93 (MQ=255)
cAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcgc > 2:4498555/1‑93 (MQ=255)
aGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGcc < 2:6115168/93‑1 (MQ=255)
ggCTTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGccc < 2:2985810/93‑1 (MQ=255)
ggCCTACTTCGTCGATGGCATGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGccc > 1:4930594/1‑93 (MQ=255)
ggCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGccc < 2:1333776/93‑1 (MQ=255)
gCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCg < 2:92634/93‑1 (MQ=255)
cTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCa < 2:6300142/93‑1 (MQ=255)
cTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCa > 2:1948118/1‑93 (MQ=255)
tACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCGACGGTTTTTAAGCGCATATAGTGGAGCCTAGCCATCATCCGTTTCAGCGCCCGCAg > 2:4260482/1‑93 (MQ=255)
aCTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGt > 1:1060712/1‑93 (MQ=255)
cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTa < 1:970403/93‑1 (MQ=255)
cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTa > 1:3672/1‑93 (MQ=255)
cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTa > 1:4468015/1‑93 (MQ=255)
cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTa < 2:1581326/93‑1 (MQ=255)
ttCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTac < 2:4187110/93‑1 (MQ=255)
tcgtcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTacc > 1:4788714/1‑93 (MQ=255)
tcgtcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTacc > 1:852211/1‑93 (MQ=255)
tcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccgga > 2:1711701/1‑93 (MQ=255)
tcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccgga < 1:1531055/93‑1 (MQ=255)
tcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccgga > 1:4312207/1‑93 (MQ=255)
gATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggacc > 1:5326983/1‑93 (MQ=255)
aTGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggaccg < 1:5903673/93‑1 (MQ=255)
aTGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggaccg < 2:4991691/93‑1 (MQ=255)
ggCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGt > 2:6057191/1‑93 (MQ=255)
cACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTAt > 2:88256/1‑93 (MQ=255)
cACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTAt < 2:408936/93‑1 (MQ=255)
cGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCg > 1:2279879/1‑93 (MQ=255)
gAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc < 1:1788586/93‑1 (MQ=255)
gAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc < 2:3847133/93‑1 (MQ=255)
gAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc < 1:25735/93‑1 (MQ=255)
aGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGcc > 2:1848072/1‑93 (MQ=255)
gTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCg < 2:3093752/93‑1 (MQ=255)
gTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCg > 1:3642881/1‑93 (MQ=255)
tCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCa < 1:4573719/93‑1 (MQ=255)
tCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCa > 2:581959/1‑93 (MQ=255)
gTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTc < 1:1246402/93‑1 (MQ=255)
gTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTc < 2:3609148/93‑1 (MQ=255)
gTAACCCCTTCCACGGTTTGGGAGCGCAGATAGTGGCCCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTc < 2:5209535/93‑1 (MQ=255)
tAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCa < 2:2242496/93‑1 (MQ=255)
aaCGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCaa < 1:1690094/93‑1 (MQ=255)
cGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCAGACCGGTATCGCCGGCACTCAACa < 1:3745236/93‑1 (MQ=255)
gcattCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACat < 2:1066003/90‑1 (MQ=255)
gCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACat > 2:4572473/1‑93 (MQ=255)
cccTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACat < 2:3505829/92‑1 (MQ=255)
ccTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACata < 1:4051159/93‑1 (MQ=255)
cTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACatat < 1:5958714/93‑1 (MQ=255)
cTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACatat < 1:199719/93‑1 (MQ=255)
ttCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt < 2:3970407/93‑1 (MQ=255)
ttCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt < 2:1886504/93‑1 (MQ=255)
ttCCACGGTTTGTGAGCGCATATAGTGGAGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt > 2:494716/1‑93 (MQ=255)
tgtcACGGGTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt < 2:5222661/90‑1 (MQ=255)
ccACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTgg > 2:846727/1‑93 (MQ=255)
ccACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTgg > 2:442561/1‑93 (MQ=255)
cACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGc > 1:727202/1‑93 (MQ=255)
cACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGc > 1:4132616/1‑93 (MQ=255)
ggTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCgag > 2:5538080/1‑93 (MQ=255)
tttGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGat < 1:301354/93‑1 (MQ=255)
ttGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGata < 1:3376379/93‑1 (MQ=255)
tgtgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGatat < 2:3299808/93‑1 (MQ=255)
tgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTg < 1:349187/93‑1 (MQ=255)
|
AGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTG > NC_000913/1535538‑1535716
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGCACC > NC_000913/1535534‑1535720
|
GGCGAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAG < SRR4302533.679309/94‑1 (MQ=60)
GGCGAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAG < SRR4302533.2579476/94‑1 (MQ=60)
GGCGAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGCATAAGTAACGCCTTCCACGGTTTGTGAG > SRR4302533.3115137/1‑94 (MQ=60)
CGAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCG < SRR4302533.887270/94‑1 (MQ=60)
GAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGC > SRR4302533.360535/1‑94 (MQ=60)
AGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCA > SRR4302533.1782225/1‑94 (MQ=60)
GATAGCGATACATCTCTTCGACCTTGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCAT < SRR4302533.2928200/94‑1 (MQ=60)
GATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCAT < SRR4302533.2657230/94‑1 (MQ=60)
GATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCAT < SRR4302533.2928199/94‑1 (MQ=60)
ATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATA < SRR4302533.3100288/94‑1 (MQ=60)
ATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATA > SRR4302533.3282104/1‑94 (MQ=60)
ATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATA > SRR4302533.5394061/1‑94 (MQ=60)
TAGCGATACATCTCTTCGGCCTGGGCGACGATCAGGCCTACTTCGTCGATCGCACGAGTATCAGTAACGCCTTCCGCGGTTTGTGAGCGCATAT < SRR4302533.339057/94‑1 (MQ=60)
TAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATAT < SRR4302533.1580483/94‑1 (MQ=60)
TAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATAT < SRR4302533.1207076/94‑1 (MQ=60)
AGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATA > SRR4302533.5384744/1‑94 (MQ=60)
AGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGACGGCACGAGAATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATA > SRR4302533.5328669/1‑94 (MQ=60)
GCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAG < SRR4302533.5496148/94‑1 (MQ=60)
CGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGT > SRR4302533.4266881/1‑94 (MQ=60)
CGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGG > SRR4302533.1919883/1‑94 (MQ=60)
GATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATACTG < SRR4302533.6126889/94‑1 (MQ=60)
ATACATCTCTTCGACCTGGGCGACGCTCAGCCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGG < SRR4302533.6252014/94‑1 (MQ=60)
ACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCG > SRR4302533.4787448/1‑94 (MQ=60)
ACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCG < SRR4302533.2286414/94‑1 (MQ=60)
ACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCG < SRR4302533.555345/94‑1 (MQ=60)
ACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCG > SRR4302533.3622765/1‑94 (MQ=60)
CTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATC < SRR4302533.3122117/94‑1 (MQ=60)
CTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATC > SRR4302533.1748406/1‑94 (MQ=60)
TCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCG < SRR4302533.4706803/94‑1 (MQ=60)
TCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCG < SRR4302533.4459353/94‑1 (MQ=60)
TTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCC > SRR4302533.756132/1‑94 (MQ=60)
CGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCAT > SRR4302533.5591613/1‑94 (MQ=60)
CGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCAT > SRR4302533.5165534/1‑94 (MQ=60)
GACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATC > SRR4302533.3182220/1‑94 (MQ=60)
GACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATC > SRR4302533.3603387/1‑94 (MQ=60)
GACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATC > SRR4302533.1450334/1‑94 (MQ=60)
CCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCAT < SRR4302533.2143163/94‑1 (MQ=60)
CTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATC > SRR4302533.2163636/1‑94 (MQ=60)
CTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATC < SRR4302533.3382804/94‑1 (MQ=60)
TGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCC < SRR4302533.409830/94‑1 (MQ=60)
TGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCC > SRR4302533.1765626/1‑94 (MQ=60)
GGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCG > SRR4302533.5109047/1‑94 (MQ=60)
GGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGT > SRR4302533.2692812/1‑94 (MQ=60)
CGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAG < SRR4302533.2447042/94‑1 (MQ=60)
GCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGTCATCATCCGTTTCAGC > SRR4302533.526872/1‑94 (MQ=60)
GCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGC < SRR4302533.3379974/94‑1 (MQ=60)
CTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCG < SRR4302533.371880/94‑1 (MQ=60)
TCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGC > SRR4302533.5105927/1‑94 (MQ=60)
CAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCC < SRR4302533.5310310/94‑1 (MQ=60)
AGGCCTACTTCGTCGATGGCATGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCC > SRR4302533.4960452/1‑94 (MQ=60)
AGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGGTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCC > SRR4302533.3249586/1‑94 (MQ=60)
GCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGC > SRR4302533.1880471/1‑94 (MQ=60)
CCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCA > SRR4302533.4292610/1‑94 (MQ=60)
CTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAG > SRR4302533.3299616/1‑94 (MQ=60)
TACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGT > SRR4302533.1066947/1‑94 (MQ=60)
ACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTA > SRR4302533.4495038/1‑94 (MQ=60)
ACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTA > SRR4302533.3704/1‑94 (MQ=60)
CTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTAC < SRR4302533.976095/94‑1 (MQ=60)
TTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACC > SRR4302533.857200/1‑94 (MQ=60)
TTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACC > SRR4302533.4817720/1‑94 (MQ=60)
TCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCG < SRR4302533.724204/94‑1 (MQ=60)
GTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGA > SRR4302533.4338166/1‑94 (MQ=60)
TCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGAC < SRR4302533.1540258/94‑1 (MQ=60)
CGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACC > SRR4302533.906047/1‑94 (MQ=60)
CGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACC > SRR4302533.5358906/1‑94 (MQ=60)
CGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACC > SRR4302533.3507923/1‑94 (MQ=60)
CGATGGCACGAGGATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGGCATCATCCGTTTCAGAGCCCGCAGTACCGGACC > SRR4302533.3352812/1‑94 (MQ=60)
GATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCG < SRR4302533.5327457/94‑1 (MQ=60)
ATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGG < SRR4302533.5939328/94‑1 (MQ=60)
GGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTA < SRR4302533.2082947/94‑1 (MQ=60)
ACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCG > SRR4302533.2293997/1‑94 (MQ=60)
GAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCC < SRR4302533.25907/94‑1 (MQ=60)
GAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCC < SRR4302533.1799462/94‑1 (MQ=60)
AGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCG > SRR4302533.3665280/1‑94 (MQ=60)
ATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCA > SRR4302533.281759/1‑94 (MQ=60)
TCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCAC < SRR4302533.4601437/94‑1 (MQ=60)
AGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTC > SRR4302533.5992248/1‑94 (MQ=60)
GTAGCGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCA < SRR4302533.456925/94‑1 (MQ=60)
GTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCA < SRR4302533.1253842/94‑1 (MQ=60)
TAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAA < SRR4302533.1923249/94‑1 (MQ=60)
TAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAA > SRR4302533.97024/1‑94 (MQ=60)
TAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAA > SRR4302533.1133775/1‑94 (MQ=60)
AACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAAC < SRR4302533.1700332/94‑1 (MQ=60)
AACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAAC > SRR4302533.4415999/1‑94 (MQ=60)
ACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACA < SRR4302533.4995493/94‑1 (MQ=60)
CGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCAGACCGGTATCGCCGGCACTCAACAT < SRR4302533.3768204/94‑1 (MQ=60)
GCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCTGCACTCCACATA > SRR4302533.5874140/1‑94 (MQ=60)
GCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATA < SRR4302533.3832926/94‑1 (MQ=60)
CCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAT < SRR4302533.4075835/94‑1 (MQ=60)
CTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATT < SRR4302533.200984/94‑1 (MQ=60)
CTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATT < SRR4302533.5994757/94‑1 (MQ=60)
TTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCACCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTG < SRR4302533.1708791/94‑1 (MQ=60)
TCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGG > SRR4302533.2532923/1‑94 (MQ=60)
CCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGC > SRR4302533.731496/1‑94 (MQ=60)
CCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGC > SRR4302533.4157704/1‑94 (MQ=60)
ACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGA > SRR4302533.4818461/1‑94 (MQ=60)
TTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATA < SRR4302533.303196/94‑1 (MQ=60)
TTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATA < SRR4302533.1229343/94‑1 (MQ=60)
TTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATA > SRR4302533.3004495/1‑94 (MQ=60)
TTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATAT < SRR4302533.3397228/94‑1 (MQ=60)
TTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATAT > SRR4302533.4492575/1‑94 (MQ=60)
TTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATAT > SRR4302533.5456902/1‑94 (MQ=60)
TGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATT > SRR4302533.5933165/1‑94 (MQ=60)
TGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATT < SRR4302533.2378913/94‑1 (MQ=60)
TGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATT > SRR4302533.3539009/1‑94 (MQ=60)
GTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTG > SRR4302533.3065084/1‑94 (MQ=60)
GTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTG < SRR4302533.3682691/94‑1 (MQ=60)
TGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGC < SRR4302533.351318/94‑1 (MQ=60)
GAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGCA < SRR4302533.3448776/94‑1 (MQ=60)
AGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGCAC < SRR4302533.888901/94‑1 (MQ=60)
GCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGCACC < SRR4302533.33158/94‑1 (MQ=60)
GCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGCACC < SRR4302533.3065455/94‑1 (MQ=60)
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GGCGAGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTGCACC > NC_000913/1535534‑1535720
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
