Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,549,144 |
T→C |
G220G (GGT→GGC) |
fdnH → |
formate dehydrogenase‑N, nitrate‑inducible, iron‑sulfur beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,549,144 | 0 | T | C | 99.5%
| 575.2
/ ‑5.9
| 182 | G220G (GGT→GGC) | fdnH | formate dehydrogenase‑N, nitrate‑inducible, iron‑sulfur beta subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (90/91); total (91/91) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 189 total aligned reads displayed.
GGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGG > NC_000913/1549054‑1549232
|
ggAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTcggcgg > 2:6019690/1‑93 (MQ=255)
ggAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTcggcgg > 1:3317295/1‑93 (MQ=255)
agaTGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTa < 1:1098088/93‑1 (MQ=255)
agaTGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTa > 2:4812559/1‑93 (MQ=255)
gaTGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTAc > 1:4958892/1‑93 (MQ=255)
tGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGGACGc > 1:101218/1‑93 (MQ=255)
gCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCa < 1:3668879/93‑1 (MQ=255)
cTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCAc > 2:2226917/1‑93 (MQ=255)
cTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCAc < 2:2131065/93‑1 (MQ=255)
cTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCAc > 2:3026230/1‑93 (MQ=255)
ggAGATGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGt > 2:521233/1‑93 (MQ=255)
aGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTa > 2:912238/1‑93 (MQ=255)
aGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTa < 1:1137661/93‑1 (MQ=255)
gCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTAt < 2:2423561/93‑1 (MQ=255)
cTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATg < 2:2452805/93‑1 (MQ=255)
tGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGt < 1:5118277/93‑1 (MQ=255)
gCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCGCGTTATGTAc < 1:3540410/93‑1 (MQ=255)
gCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTAc < 2:3485779/93‑1 (MQ=255)
gAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGtg > 1:2966317/1‑93 (MQ=255)
aaCAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGTGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGtgc < 1:5825018/93‑1 (MQ=255)
cAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGtgctg > 2:1536577/1‑93 (MQ=255)
gcgcGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCa > 1:1070560/1‑93 (MQ=255)
gcgTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATc > 1:5558940/1‑93 (MQ=255)
cgTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCa > 1:1933010/1‑93 (MQ=255)
gTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCAc < 2:25463/93‑1 (MQ=255)
ggCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGc < 1:6239995/93‑1 (MQ=255)
ggCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGc < 2:3757549/93‑1 (MQ=255)
gCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGcc > 2:4193927/1‑93 (MQ=255)
gCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGcc > 2:2868053/1‑93 (MQ=255)
gCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGcc < 2:843236/93‑1 (MQ=255)
cGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCg < 2:4032121/93‑1 (MQ=255)
gAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGa < 2:1974418/93‑1 (MQ=255)
gAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGa < 2:832816/93‑1 (MQ=255)
gAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGa < 2:6174568/93‑1 (MQ=255)
aaaCTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGAt < 1:5844809/93‑1 (MQ=255)
aaCTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATc > 1:4589225/1‑93 (MQ=255)
aCTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCa > 1:4324819/1‑93 (MQ=255)
tGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGc < 1:6141112/93‑1 (MQ=255)
gAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGcc > 1:681465/1‑93 (MQ=255)
aaaGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCg > 1:6104473/1‑93 (MQ=255)
aaaGCGCGTGG‑TACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCgg < 1:1457667/93‑1 (MQ=255)
aaGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCgg > 2:4696078/1‑93 (MQ=255)
aGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGa > 2:1641298/1‑93 (MQ=255)
gcgcGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAg < 1:3340833/93‑1 (MQ=255)
gcgTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCt > 1:4009982/1‑93 (MQ=255)
cgTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTg < 1:1375696/93‑1 (MQ=255)
gTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACTTGCTGCATCACGCCGATCAGCCGGAGCTGt > 1:4132991/1‑93 (MQ=255)
tGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTa < 2:1376093/93‑1 (MQ=255)
ggTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTAt > 1:244907/1‑93 (MQ=255)
gTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATc > 2:5729426/1‑93 (MQ=255)
ttACGAACATGCTGGCGTCTACAACCCGGAAGGGGACGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCa > 1:4767797/1‑93 (MQ=255)
tACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCAc < 1:6169952/93‑1 (MQ=255)
aCGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACg < 2:5592341/93‑1 (MQ=255)
aaCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTc > 1:6180066/1‑93 (MQ=255)
aaCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTc < 2:4067691/93‑1 (MQ=255)
aaCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTc < 2:694179/93‑1 (MQ=255)
aaCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTc < 1:1532111/93‑1 (MQ=255)
aCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCt < 2:5637849/93‑1 (MQ=255)
aTGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGc > 2:3899540/1‑93 (MQ=255)
tGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGcc > 2:4096922/1‑93 (MQ=255)
cTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGa > 2:3451401/1‑93 (MQ=255)
tGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGaa > 2:2236056/1‑93 (MQ=255)
tGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGaa > 1:2696798/1‑93 (MQ=255)
ggCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGaaa < 2:3629541/93‑1 (MQ=255)
cGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGa > 2:611849/1‑93 (MQ=255)
cGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGa < 2:5882252/93‑1 (MQ=255)
gTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGAt > 1:1285270/1‑93 (MQ=255)
gTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGAt < 2:4411670/93‑1 (MQ=255)
tCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATc > 2:1081792/1‑93 (MQ=255)
tCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATc > 2:3183988/1‑93 (MQ=255)
tCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATc > 1:2239466/1‑93 (MQ=255)
cTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATcc < 1:1396744/93‑1 (MQ=255)
cTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATcc < 2:5860543/93‑1 (MQ=255)
cTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATcc < 1:454269/93‑1 (MQ=255)
tACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCg > 1:5897013/1‑93 (MQ=255)
tACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCg < 1:5581995/93‑1 (MQ=255)
aCAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGa > 1:4055473/1‑93 (MQ=255)
aCAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGa > 2:1149498/1‑93 (MQ=255)
cAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGaa < 1:5046111/93‑1 (MQ=255)
aaCCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAg > 2:4250884/1‑93 (MQ=255)
aCCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGa > 2:960547/1‑93 (MQ=255)
aCCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGa < 2:1675813/93‑1 (MQ=255)
aCCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATAAAGGTCTGCCGAAAGATCTGAAGa > 2:4256705/1‑93 (MQ=255)
cccGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGAt < 2:4573899/93‑1 (MQ=255)
ccGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATc > 2:1917366/1‑93 (MQ=255)
ccGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATc < 2:5306875/93‑1 (MQ=255)
cGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCTGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCg > 1:3690746/1‑93 (MQ=255)
cGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCg < 2:135568/93‑1 (MQ=255)
ggAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGa > 1:1713161/1‑93 (MQ=255)
gAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGac > 1:4492850/1‑93 (MQ=255)
gAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGac < 1:4179195/93‑1 (MQ=255)
aaGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGaca > 1:1520972/1‑93 (MQ=255)
aGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGacac > 1:5294283/1‑93 (MQ=255)
aGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGacac > 1:4317801/1‑93 (MQ=255)
gggTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCt > 2:3302121/1‑93 (MQ=255)
gggTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCt < 1:3025197/93‑1 (MQ=255)
gggTCGGCGCTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCt < 2:1319459/93‑1 (MQ=255)
ggTCGTCGGTACGCACGTTATGTACGTGCTGCATCGCGCCGATCAGCCGGAGCGGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTc < 1:1445065/93‑1 (MQ=255)
tCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCgg < 1:5598220/93‑1 (MQ=255)
tCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCgg > 1:5296788/1‑93 (MQ=255)
|
GGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGG > NC_000913/1549054‑1549232
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAAGGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAGC > NC_000913/1549051‑1549237
|
GAAGGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGC < SRR4302533.5277017/94‑1 (MQ=60)
AAGGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCG > SRR4302533.6265024/1‑94 (MQ=60)
AGGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGG > SRR4302533.3337780/1‑94 (MQ=60)
GGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGT < SRR4302533.3469165/94‑1 (MQ=60)
AGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTAC > SRR4302533.3997608/1‑94 (MQ=60)
AGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTAC > SRR4302533.4988934/1‑94 (MQ=60)
AGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTAC < SRR4302533.1104591/94‑1 (MQ=60)
GATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACG < SRR4302533.6234262/94‑1 (MQ=60)
ATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGGACGC > SRR4302533.101847/1‑94 (MQ=60)
GCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCAC < SRR4302533.3691429/94‑1 (MQ=60)
CTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACG > SRR4302533.3296355/1‑94 (MQ=60)
CTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACG > SRR4302533.1143718/1‑94 (MQ=60)
CTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACG < SRR4302533.4316126/94‑1 (MQ=60)
CTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACG > SRR4302533.4202294/1‑94 (MQ=60)
CTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACG < SRR4302533.4149468/94‑1 (MQ=60)
TGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGT < SRR4302533.1364239/94‑1 (MQ=60)
AGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTAT < SRR4302533.1144429/94‑1 (MQ=60)
AGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTAT > SRR4302533.1083491/1‑94 (MQ=60)
TGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTA < SRR4302533.5149202/94‑1 (MQ=60)
GGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTAC < SRR4302533.1880786/94‑1 (MQ=60)
GGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTAC < SRR4302533.683662/94‑1 (MQ=60)
GCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCGCGTTATGTACG < SRR4302533.3562225/94‑1 (MQ=60)
GGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTG > SRR4302533.2984447/1‑94 (MQ=60)
AACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGTGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCT < SRR4302533.5860207/94‑1 (MQ=60)
AGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCA > SRR4302533.1076867/1‑94 (MQ=60)
AGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCA > SRR4302533.5369440/1‑94 (MQ=60)
CGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATC > SRR4302533.4524409/1‑94 (MQ=60)
CGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATC > SRR4302533.5592538/1‑94 (MQ=60)
GCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCA > SRR4302533.1944803/1‑94 (MQ=60)
CGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCAC < SRR4302533.562991/94‑1 (MQ=60)
GTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACG > SRR4302533.2347506/1‑94 (MQ=60)
TGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGC > SRR4302533.1395157/1‑94 (MQ=60)
GGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCC > SRR4302533.4457186/1‑94 (MQ=60)
GGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCC < SRR4302533.369596/94‑1 (MQ=60)
GGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCC < SRR4302533.6277360/94‑1 (MQ=60)
GGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCC < SRR4302533.3004698/94‑1 (MQ=60)
AAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATC < SRR4302533.5880144/94‑1 (MQ=60)
AAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATC > SRR4302533.4617023/1‑94 (MQ=60)
AACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCA > SRR4302533.4350867/1‑94 (MQ=60)
AACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCA < SRR4302533.3567299/94‑1 (MQ=60)
ACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAG < SRR4302533.5888339/94‑1 (MQ=60)
ACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAG < SRR4302533.4610163/94‑1 (MQ=60)
TGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCC < SRR4302533.6178098/94‑1 (MQ=60)
TGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCC > SRR4302533.685495/1‑94 (MQ=60)
TGAAAGCGCGTGGTTACGAACATGCCGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCC > SRR4302533.609841/1‑94 (MQ=60)
GAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCG > SRR4302533.6141319/1‑94 (MQ=60)
AAAGCGCGTGG‑TACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGA < SRR4302533.1466458/94‑1 (MQ=60)
GCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGC < SRR4302533.3361481/94‑1 (MQ=60)
CGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCT < SRR4302533.1430750/94‑1 (MQ=60)
CGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCT > SRR4302533.1528511/1‑94 (MQ=60)
CGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCT > SRR4302533.4039188/1‑94 (MQ=60)
CGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCT > SRR4302533.4034393/1‑94 (MQ=60)
CGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACTTGCTGCATCACGCCGATCAGCCGGAGCTGT > SRR4302533.4158081/1‑94 (MQ=60)
CGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGT < SRR4302533.1383975/94‑1 (MQ=60)
TGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTAT > SRR4302533.246423/1‑94 (MQ=60)
GTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGACGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCA > SRR4302533.4796699/1‑94 (MQ=60)
TACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACG < SRR4302533.6207036/94‑1 (MQ=60)
CGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGT > SRR4302533.922964/1‑94 (MQ=60)
GAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTC > SRR4302533.6217181/1‑94 (MQ=60)
AACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCT < SRR4302533.2158879/94‑1 (MQ=60)
AACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCT < SRR4302533.1541316/94‑1 (MQ=60)
CATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGC > SRR4302533.1203858/1‑94 (MQ=60)
CTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAA > SRR4302533.2713323/1‑94 (MQ=60)
CGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGAT > SRR4302533.1293000/1‑94 (MQ=60)
CGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGAT < SRR4302533.5096715/94‑1 (MQ=60)
GTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATC > SRR4302533.6153314/1‑94 (MQ=60)
GTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATC > SRR4302533.2253305/1‑94 (MQ=60)
GTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATC > SRR4302533.2707467/1‑94 (MQ=60)
GTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATC < SRR4302533.6209848/94‑1 (MQ=60)
TCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCC < SRR4302533.5875335/94‑1 (MQ=60)
CTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCG > SRR4302533.507346/1‑94 (MQ=60)
CTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCG > SRR4302533.5932623/1‑94 (MQ=60)
CTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCG < SRR4302533.1405163/94‑1 (MQ=60)
CTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCG < SRR4302533.456984/94‑1 (MQ=60)
TACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGA > SRR4302533.4080164/1‑94 (MQ=60)
TACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGA < SRR4302533.5615723/94‑1 (MQ=60)
TACAACCCGGAAGGGGTCGGCGGCACGCACGTTATGTACGTGCTGCATCACGCCGATCAGTCGGAGCTGTATCACGGTCTGCCGAAAGATCCGA > SRR4302533.517464/1‑94 (MQ=60)
CAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAG < SRR4302533.5076638/94‑1 (MQ=60)
AACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGA > SRR4302533.5607418/1‑94 (MQ=60)
AACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGA > SRR4302533.14623/1‑94 (MQ=60)
AACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGA < SRR4302533.2822847/94‑1 (MQ=60)
ACGCGGAAGGGGTCGGCTGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGAT < SRR4302533.3069466/94‑1 (MQ=60)
ACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGAT < SRR4302533.5736328/94‑1 (MQ=60)
CCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATC < SRR4302533.165671/94‑1 (MQ=60)
CCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCTGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCG > SRR4302533.3713423/1‑94 (MQ=60)
CGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGA > SRR4302533.1723541/1‑94 (MQ=60)
GGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGAC > SRR4302533.4520061/1‑94 (MQ=60)
GGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGAC < SRR4302533.4960214/94‑1 (MQ=60)
GAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACA < SRR4302533.4204510/94‑1 (MQ=60)
GAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACA > SRR4302533.1530129/1‑94 (MQ=60)
GAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACA > SRR4302533.4637481/1‑94 (MQ=60)
AAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACAC > SRR4302533.4343802/1‑94 (MQ=60)
AAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACAC > SRR4302533.5325973/1‑94 (MQ=60)
GGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTC < SRR4302533.3043704/94‑1 (MQ=60)
GGTCGTCGGTACGCACGTTATGTACGTGCTGCATCGCGCCGATCAGCCGGAGCGGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCG < SRR4302533.1453782/94‑1 (MQ=60)
GTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGG > SRR4302533.5328511/1‑94 (MQ=60)
TCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGT < SRR4302533.5632044/94‑1 (MQ=60)
GGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGTAAGATCCGAAGATCGACACCTCGGTAA > SRR4302533.6041153/1‑94 (MQ=60)
GGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAA < SRR4302533.5602130/94‑1 (MQ=60)
GCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAG < SRR4302533.2888218/94‑1 (MQ=60)
GCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAG > SRR4302533.1855930/1‑94 (MQ=60)
GCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAG < SRR4302533.2310206/94‑1 (MQ=60)
CGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAGC > SRR4302533.6117358/1‑94 (MQ=60)
CGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAGC < SRR4302533.528175/94‑1 (MQ=60)
|
GAAGGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAGC > NC_000913/1549051‑1549237
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
