Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,567,922 |
A→G |
F198L (TTC→CTC) |
xasA ← |
acid sensitivity protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,567,922 | 0 | A | G | 100.0%
| 662.6
/ NA
| 203 | F198L (TTC→CTC) | xasA | acid sensitivity protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (90/113); total (90/113) |
Only 100 of 211 total aligned reads displayed.
CATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAAGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATG > NC_000913/1567833‑1568011
|
catttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTc > 1:5878007/1‑93 (MQ=255)
atttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGACGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCa < 2:5134869/93‑1 (MQ=255)
tttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAg > 2:3380163/1‑93 (MQ=255)
tcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAggg > 1:2848817/1‑93 (MQ=255)
tattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGga < 1:4531700/92‑1 (MQ=255)
attGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGgaa > 1:6059813/1‑93 (MQ=255)
tGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGgaaga < 1:2918488/93‑1 (MQ=255)
cGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAgg > 2:5051831/1‑93 (MQ=255)
gTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGt < 1:2610051/93‑1 (MQ=255)
tGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTc < 2:4521078/93‑1 (MQ=255)
tGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTc > 2:1732408/1‑93 (MQ=255)
gggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCt > 1:5526740/1‑93 (MQ=255)
gggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCt > 2:3037330/1‑93 (MQ=255)
gggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCt > 2:2542221/1‑93 (MQ=255)
ggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCtt < 1:3135306/93‑1 (MQ=255)
gTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTc < 2:5892929/93‑1 (MQ=255)
ttGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTGGAGAGGTCAGGGAAGAAGGTCTTCg < 2:1380225/93‑1 (MQ=255)
gCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGaa > 2:5597261/1‑93 (MQ=255)
cGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAAt > 1:5812414/1‑93 (MQ=255)
gATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATcc > 1:4082277/1‑93 (MQ=255)
aTGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCa > 2:3267323/1‑93 (MQ=255)
gCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCAtt > 1:6105562/1‑93 (MQ=255)
ttCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTc > 1:2775368/1‑93 (MQ=255)
tCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCg > 2:4077204/1‑93 (MQ=255)
tCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCg > 2:124196/1‑93 (MQ=255)
tCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCg > 1:2537255/1‑93 (MQ=255)
aCGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTCGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATa < 2:2926641/93‑1 (MQ=255)
aCGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATa < 1:2158834/93‑1 (MQ=255)
aCGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATa < 2:4979570/93‑1 (MQ=255)
aCGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATa < 2:5830454/93‑1 (MQ=255)
cGCCCATATAACTCAAAATGAAGGCAACAAATACTGCCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAg < 1:1206090/93‑1 (MQ=255)
gCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGc < 1:1443010/93‑1 (MQ=255)
cccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCa < 1:923565/93‑1 (MQ=255)
ccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCaa > 1:6271790/1‑93 (MQ=255)
ccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCaa > 2:4866946/1‑93 (MQ=255)
ccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCaa < 2:5717700/93‑1 (MQ=255)
cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCCAc > 2:4638309/1‑93 (MQ=255)
cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAc < 2:2758805/93‑1 (MQ=255)
cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAc > 1:3965886/1‑93 (MQ=255)
cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAc > 1:1007664/1‑93 (MQ=255)
atatAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACg < 1:3335945/93‑1 (MQ=255)
tataTCACAAAATGAAGGCCACAATAACTACCAGGGTTCCCCCTTTGGGGAGCTCAGGGAAGAAGGTCTTCGAAGACATTTCGAAAGCATCgg < 2:1939998/93‑1 (MQ=255)
tataACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACgg > 2:760840/1‑93 (MQ=255)
ataACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACggg < 1:3738078/93‑1 (MQ=255)
aCTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGc < 1:3573546/93‑1 (MQ=255)
aCTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGc < 1:401087/93‑1 (MQ=255)
tCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCAc < 2:4043208/93‑1 (MQ=255)
aaaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCgg > 1:5155541/1‑93 (MQ=255)
aaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGa < 2:6253057/93‑1 (MQ=255)
aTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAg < 1:864196/93‑1 (MQ=255)
tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt > 1:1750150/1‑93 (MQ=255)
tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt < 1:4029615/93‑1 (MQ=255)
tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt > 1:3270094/1‑93 (MQ=255)
tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt < 1:5188256/93‑1 (MQ=255)
aaGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGc < 1:4660410/93‑1 (MQ=255)
ggCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAg > 2:390806/1‑93 (MQ=255)
caacaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGAt > 1:2395069/1‑93 (MQ=255)
caacaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGAt < 1:5638117/93‑1 (MQ=255)
caacaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGAt < 1:4192166/93‑1 (MQ=255)
acaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGGAGAAGGTCTTCGAATCCATTTCGATAGCCACGGGGGGACCGGAGTGCGGATaa > 2:5219624/1‑93 (MQ=255)
acaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTGCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATaa < 1:5402735/93‑1 (MQ=255)
aaaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAAt < 2:4317429/93‑1 (MQ=255)
aaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATa < 1:3514292/93‑1 (MQ=255)
aaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATa > 2:5420419/1‑93 (MQ=255)
aaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATa > 2:1810996/1‑93 (MQ=255)
aTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAg > 1:4354053/1‑93 (MQ=255)
aTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAg > 2:5912594/1‑93 (MQ=255)
tactacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGc < 2:2436266/93‑1 (MQ=255)
tactacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGc > 1:5519831/1‑93 (MQ=255)
tactacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGc < 1:1839401/93‑1 (MQ=255)
ctacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCg > 1:1332384/1‑93 (MQ=255)
tacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGc > 2:4172155/1‑93 (MQ=255)
tacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGc < 2:5919174/93‑1 (MQ=255)
ccAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTa < 1:2452013/93‑1 (MQ=255)
cAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTaa > 2:5864048/1‑93 (MQ=255)
cAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTaa < 1:1908370/93‑1 (MQ=255)
cAGGGTGCAAACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTaa < 1:1936339/93‑1 (MQ=255)
aGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAt > 2:3337742/1‑93 (MQ=255)
aGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAt > 2:6038320/1‑93 (MQ=255)
gggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATg > 1:1454912/1‑93 (MQ=255)
gggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATg > 2:1569091/1‑93 (MQ=255)
ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc < 1:814446/93‑1 (MQ=255)
ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc < 1:667309/93‑1 (MQ=255)
ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc > 2:5017475/1‑93 (MQ=255)
ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc < 1:5973774/93‑1 (MQ=255)
cccACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATc < 1:3114090/93‑1 (MQ=255)
cccACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATc < 2:5448635/93‑1 (MQ=255)
ccACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCa > 2:2024740/1‑93 (MQ=255)
cACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaa < 1:4804681/93‑1 (MQ=255)
cACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaa < 2:1139561/93‑1 (MQ=255)
aCTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaa < 1:3884209/93‑1 (MQ=255)
aCTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaa > 1:3683502/1‑93 (MQ=255)
cTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaaa > 1:4429910/1‑93 (MQ=255)
cTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaaa > 1:1600182/1‑93 (MQ=255)
cTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaaa > 1:3002377/1‑93 (MQ=255)
cTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaaa > 2:1693784/1‑93 (MQ=255)
tttAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaat < 2:4770718/93‑1 (MQ=255)
tttAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaat < 2:285772/93‑1 (MQ=255)
ttAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaata > 2:3778901/1‑93 (MQ=255)
agagGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATg < 1:6166227/93‑1 (MQ=255)
|
CATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAAGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATG > NC_000913/1567833‑1568011
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCTCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAAGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATGCAGG > NC_000913/1567829‑1568015
|
TGCTCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAG > SRR4302533.5344434/1‑94 (MQ=60)
TGCTCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAG > SRR4302533.2799633/1‑94 (MQ=60)
GCTCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGG < SRR4302533.6051592/94‑1 (MQ=60)
CTCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGT < SRR4302533.4155942/94‑1 (MQ=60)
TCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTC > SRR4302533.5913537/1‑94 (MQ=60)
TTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGG < SRR4302533.3966743/94‑1 (MQ=60)
TTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGG > SRR4302533.2866344/1‑94 (MQ=60)
TCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGA > SRR4302533.55596/1‑94 (MQ=60)
TATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAA < SRR4302533.4559140/94‑1 (MQ=60)
CATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAA > SRR4302533.6096495/1‑94 (MQ=60)
ATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAG < SRR4302533.2586792/94‑1 (MQ=60)
ATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAG < SRR4302533.2799395/94‑1 (MQ=60)
TTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGA < SRR4302533.3573814/94‑1 (MQ=60)
TGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAA < SRR4302533.2936374/94‑1 (MQ=60)
TGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAA < SRR4302533.4328544/94‑1 (MQ=60)
GACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAG > SRR4302533.4507794/1‑94 (MQ=60)
GTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTC < SRR4302533.2422203/94‑1 (MQ=60)
GTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTC < SRR4302533.2626074/94‑1 (MQ=60)
TGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCT < SRR4302533.1349440/94‑1 (MQ=60)
TGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCT > SRR4302533.5560105/1‑94 (MQ=60)
TGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCT < SRR4302533.5002656/94‑1 (MQ=60)
GGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTT < SRR4302533.5965951/94‑1 (MQ=60)
GGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTC < SRR4302533.3154587/94‑1 (MQ=60)
GCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAAT > SRR4302533.5847519/1‑94 (MQ=60)
GCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAAT < SRR4302533.772276/94‑1 (MQ=60)
GGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCC > SRR4302533.4107129/1‑94 (MQ=60)
TGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATT < SRR4302533.1891467/94‑1 (MQ=60)
TGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATT < SRR4302533.5956880/94‑1 (MQ=60)
TGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATT > SRR4302533.6142431/1‑94 (MQ=60)
GCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTT < SRR4302533.3715747/94‑1 (MQ=60)
CTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTC > SRR4302533.1454893/1‑94 (MQ=60)
CTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTC > SRR4302533.2792412/1‑94 (MQ=60)
TTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCG > SRR4302533.2552876/1‑94 (MQ=60)
TTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCG < SRR4302533.3348996/94‑1 (MQ=60)
CTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGAT < SRR4302533.1929967/94‑1 (MQ=60)
CTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGAT > SRR4302533.2915551/1‑94 (MQ=60)
TACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATA < SRR4302533.1171439/94‑1 (MQ=60)
ACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAG < SRR4302533.2172126/94‑1 (MQ=60)
ACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGAGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAG < SRR4302533.3633730/94‑1 (MQ=60)
CGCCCATATAACTCAAAATGAAGGCAACAAATACTGCCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGC < SRR4302533.1213334/94‑1 (MQ=60)
GCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCA > SRR4302533.2756844/1‑94 (MQ=60)
GCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCA < SRR4302533.1451716/94‑1 (MQ=60)
CCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAA > SRR4302533.6309253/1‑94 (MQ=60)
CCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAA < SRR4302533.928990/94‑1 (MQ=60)
CCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAC > SRR4302533.400394/1‑94 (MQ=60)
CCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAC > SRR4302533.3990046/1‑94 (MQ=60)
CCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAC > SRR4302533.1013558/1‑94 (MQ=60)
ATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGG < SRR4302533.3356560/94‑1 (MQ=60)
TATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGG < SRR4302533.5416969/94‑1 (MQ=60)
ATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGG < SRR4302533.3761005/94‑1 (MQ=60)
AACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGC < SRR4302533.4690579/94‑1 (MQ=60)
ACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCA < SRR4302533.3595564/94‑1 (MQ=60)
ACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCA < SRR4302533.2477155/94‑1 (MQ=60)
ACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCA < SRR4302533.403506/94‑1 (MQ=60)
TCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACC < SRR4302533.5657671/94‑1 (MQ=60)
AAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGG > SRR4302533.5186674/1‑94 (MQ=60)
AAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGA > SRR4302533.6059145/1‑94 (MQ=60)
ATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGT > SRR4302533.3290271/1‑94 (MQ=60)
ATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGT > SRR4302533.1760806/1‑94 (MQ=60)
ATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGT < SRR4302533.869258/94‑1 (MQ=60)
TGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTG < SRR4302533.5219568/94‑1 (MQ=60)
TGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTG < SRR4302533.4054144/94‑1 (MQ=60)
AAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCA < SRR4302533.4688653/94‑1 (MQ=60)
AGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAG < SRR4302533.2125937/94‑1 (MQ=60)
GCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGAT < SRR4302533.4045729/94‑1 (MQ=60)
GCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGAT > SRR4302533.2409854/1‑94 (MQ=60)
CAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATA < SRR4302533.5672206/94‑1 (MQ=60)
CAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATA < SRR4302533.4217538/94‑1 (MQ=60)
AACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAA > SRR4302533.902704/1‑94 (MQ=60)
AACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAA > SRR4302533.3921006/1‑94 (MQ=60)
ACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTGCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAA < SRR4302533.5435200/94‑1 (MQ=60)
CAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAAT > SRR4302533.124128/1‑94 (MQ=60)
AAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATA > SRR4302533.5450219/1‑94 (MQ=60)
AAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATA < SRR4302533.3055932/94‑1 (MQ=60)
AATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAG < SRR4302533.3535954/94‑1 (MQ=60)
AATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAG > SRR4302533.3268160/1‑94 (MQ=60)
AATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAG > SRR4302533.4380332/1‑94 (MQ=60)
ATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGC > SRR4302533.6115781/1‑94 (MQ=60)
ATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGC > SRR4302533.5553159/1‑94 (MQ=60)
ATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGC > SRR4302533.5856850/1‑94 (MQ=60)
ATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGC > SRR4302533.4137723/1‑94 (MQ=60)
TACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCC < SRR4302533.1850621/94‑1 (MQ=60)
TACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCC < SRR4302533.5194996/94‑1 (MQ=60)
ACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCG > SRR4302533.1340380/1‑94 (MQ=60)
CTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGC > SRR4302533.3431094/1‑94 (MQ=60)
CCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAA < SRR4302533.2467147/94‑1 (MQ=60)
CAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAT < SRR4302533.4667513/94‑1 (MQ=60)
CAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAT < SRR4302533.1920010/94‑1 (MQ=60)
CAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAT < SRR4302533.4063919/94‑1 (MQ=60)
CAGGGTGCAAACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAT < SRR4302533.1948149/94‑1 (MQ=60)
AGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATG < SRR4302533.3854561/94‑1 (MQ=60)
AGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATG > SRR4302533.1463684/1‑94 (MQ=60)
AGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATG < SRR4302533.2387505/94‑1 (MQ=60)
AGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATG < SRR4302533.6314337/94‑1 (MQ=60)
GGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGC < SRR4302533.3117902/94‑1 (MQ=60)
GGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCG < SRR4302533.671252/94‑1 (MQ=60)
GGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCG < SRR4302533.5747395/94‑1 (MQ=60)
GGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCG < SRR4302533.819213/94‑1 (MQ=60)
GGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCG < SRR4302533.6009934/94‑1 (MQ=60)
GCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATC > SRR4302533.6205658/1‑94 (MQ=60)
CCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCA < SRR4302533.1005389/94‑1 (MQ=60)
CCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCA < SRR4302533.83448/94‑1 (MQ=60)
CCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCA < SRR4302533.3133241/94‑1 (MQ=60)
CCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCA > SRR4302533.4810891/1‑94 (MQ=60)
CCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAA > SRR4302533.1720860/1‑94 (MQ=60)
CCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAA > SRR4302533.1952834/1‑94 (MQ=60)
CACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAA < SRR4302533.3141718/94‑1 (MQ=60)
CACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAA > SRR4302533.3706141/1‑94 (MQ=60)
CACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAA < SRR4302533.4833777/94‑1 (MQ=60)
ACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAA > SRR4302533.4456689/1‑94 (MQ=60)
ACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAA > SRR4302533.2966972/1‑94 (MQ=60)
ACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAA > SRR4302533.3020737/1‑94 (MQ=60)
ACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAA < SRR4302533.3907909/94‑1 (MQ=60)
ACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAA > SRR4302533.1609869/1‑94 (MQ=60)
CTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAAT < SRR4302533.1529368/94‑1 (MQ=60)
CTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAAT < SRR4302533.4404661/94‑1 (MQ=60)
AGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATGC < SRR4302533.615316/94‑1 (MQ=60)
AGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATGC < SRR4302533.6203288/94‑1 (MQ=60)
AGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATGC < SRR4302533.1806015/94‑1 (MQ=60)
GAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATGCA > SRR4302533.2531533/1‑94 (MQ=60)
GAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATGCA < SRR4302533.5991788/94‑1 (MQ=60)
GGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATGCAGG < SRR4302533.183766/94‑1 (MQ=60)
|
TGCTCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAAGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATGCAGG > NC_000913/1567829‑1568015
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
