Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,568,197 |
A→G |
M106T (ATG→ACG) |
xasA ← |
acid sensitivity protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,568,197 | 0 | A | G | 100.0%
| 609.3
/ NA
| 189 | M106T (ATG→ACG) | xasA | acid sensitivity protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (87/102); total (87/102) |
Only 100 of 189 total aligned reads displayed.
ATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGC > NC_000913/1568107‑1568285
|
tgaGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCg < 1:562376/93‑1 (MQ=255)
agaGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGACCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCg < 1:985693/92‑1 (MQ=255)
gTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGaa > 2:5265997/1‑93 (MQ=255)
tgctgcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAAt < 1:5017475/93‑1 (MQ=255)
gctgcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATa < 2:1385724/93‑1 (MQ=255)
ctgcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATaa > 2:5524160/1‑93 (MQ=255)
gcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATaaaa > 2:5149524/1‑93 (MQ=255)
gcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATaaaa < 1:3859430/93‑1 (MQ=255)
gcAATAGTTTTGGTAATGGGGTCTTCATGCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATaaaa < 1:5219624/93‑1 (MQ=255)
aaTAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAAcc < 2:4805571/93‑1 (MQ=255)
aaTAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAAcc > 1:6279367/1‑93 (MQ=255)
tAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTGGGAATAAAACCaa > 1:1289701/1‑93 (MQ=255)
tAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCaa < 1:5398978/93‑1 (MQ=255)
tAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCaa < 2:6012892/93‑1 (MQ=255)
tAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGGCGGAATAAAACCaa < 2:5434127/93‑1 (MQ=255)
aGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAAt < 2:1471180/93‑1 (MQ=255)
aGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAAt < 1:4077204/93‑1 (MQ=255)
gTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATg > 1:5151686/1‑93 (MQ=255)
ttttGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATgg < 1:124196/93‑1 (MQ=255)
tttGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGc < 1:2079448/93‑1 (MQ=255)
tGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGa < 2:934058/93‑1 (MQ=255)
tAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGAttt < 1:2834266/93‑1 (MQ=255)
tAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGAttt < 1:5555010/93‑1 (MQ=255)
aaTGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTg > 1:4157894/1‑93 (MQ=255)
aaTGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTg > 1:1192259/1‑93 (MQ=255)
tGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCa > 2:1139515/1‑93 (MQ=255)
tGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCa > 1:5163434/1‑93 (MQ=255)
gggTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGa > 1:3622643/1‑93 (MQ=255)
gTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATa < 2:3002377/93‑1 (MQ=255)
gTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATa > 2:2095892/1‑93 (MQ=255)
tCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGGGCACCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGAATTGCAGATAg > 2:3397135/1‑93 (MQ=255)
cTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGc > 2:5055657/1‑93 (MQ=255)
cTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGc > 1:4500420/1‑93 (MQ=255)
ttcattcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGTTATTTGCAGATAGcc > 2:6309644/1‑93 (MQ=255)
tcattcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCa > 2:6072466/1‑93 (MQ=255)
ttcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAAt > 2:2565600/1‑93 (MQ=255)
ttcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAAt > 1:1673054/1‑93 (MQ=255)
ttcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAAt > 2:4284227/1‑93 (MQ=255)
tcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATg < 2:2511432/93‑1 (MQ=255)
caGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATga < 2:5346130/93‑1 (MQ=255)
aGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATgag < 2:3002012/93‑1 (MQ=255)
gcgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATgaga > 1:2013931/1‑93 (MQ=255)
gcgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATgaga > 2:6206562/1‑93 (MQ=255)
gcgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATgaga > 1:1802635/1‑93 (MQ=255)
cgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGAt < 2:4231077/93‑1 (MQ=255)
cgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGAt < 1:76502/93‑1 (MQ=255)
gcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATc > 2:4706526/1‑93 (MQ=255)
gcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATc > 2:695266/1‑93 (MQ=255)
gcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATc < 2:1332384/93‑1 (MQ=255)
gcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATc > 1:4446511/1‑93 (MQ=255)
tGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGc < 2:5417629/93‑1 (MQ=255)
tGGCCATTTAAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGc > 1:6300927/1‑93 (MQ=255)
ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt < 1:6038320/93‑1 (MQ=255)
ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt < 1:4305053/93‑1 (MQ=255)
ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt < 2:3640339/93‑1 (MQ=255)
ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt < 2:4922471/93‑1 (MQ=255)
ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt > 1:3190703/1‑93 (MQ=255)
ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt < 1:5000239/93‑1 (MQ=255)
gCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTg < 2:2775368/93‑1 (MQ=255)
gCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTg < 1:5351612/93‑1 (MQ=255)
aTTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCaa > 1:4185452/1‑93 (MQ=255)
tttCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCaaa < 1:2346889/93‑1 (MQ=255)
tttCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCaaa < 2:1713178/93‑1 (MQ=255)
ttCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAAt < 2:3244637/93‑1 (MQ=255)
aGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATccc > 2:5882519/1‑93 (MQ=255)
aGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATccc < 1:2481242/93‑1 (MQ=255)
aGGATGTAGGAGAGTGCCCCGAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATccc > 2:6163294/1‑93 (MQ=255)
ggATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATcccc > 1:4369307/1‑93 (MQ=255)
ggATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGAGATTTGCAGATAGCCAAATGAGATCGCTGCAAATcccc > 2:4488250/1‑93 (MQ=255)
gATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCa < 1:4706408/93‑1 (MQ=255)
gATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCa > 2:4345969/1‑93 (MQ=255)
aTGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAt < 1:4388875/93‑1 (MQ=255)
gTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAtct < 1:1049578/93‑1 (MQ=255)
gTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAtct < 2:3894183/93‑1 (MQ=255)
tAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAtctc < 2:1940998/93‑1 (MQ=255)
gTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCa > 2:4163427/1‑93 (MQ=255)
gTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCa < 2:4853205/93‑1 (MQ=255)
gTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCa < 2:3761391/93‑1 (MQ=255)
tGCCCCTAACACGAAATAGAGCGTCGGGATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCag > 1:3912340/1‑93 (MQ=255)
gCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCaga < 1:1918226/93‑1 (MQ=255)
ccccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCagag > 1:3557568/1‑93 (MQ=255)
ccccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCagag < 2:5713734/93‑1 (MQ=255)
cgtAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTa < 1:560547/91‑1 (MQ=255)
ccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTa < 2:4429910/93‑1 (MQ=255)
ccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTa < 1:3775508/93‑1 (MQ=255)
ccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTa < 2:1853420/93‑1 (MQ=255)
tAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAtt > 2:4725028/1‑93 (MQ=255)
tAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAtt < 2:3467548/93‑1 (MQ=255)
tAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAtt > 1:1564835/1‑93 (MQ=255)
aaCACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAttt > 2:2686618/1‑93 (MQ=255)
acacGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTg < 2:4354053/93‑1 (MQ=255)
acGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGAt < 1:3363970/93‑1 (MQ=255)
aaTAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATAccc > 1:4365262/1‑93 (MQ=255)
aaTAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATAccc < 1:1083023/93‑1 (MQ=255)
tAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAg < 1:4866946/93‑1 (MQ=255)
tAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAg < 2:2810748/93‑1 (MQ=255)
agagCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAgg > 2:5907041/1‑93 (MQ=255)
agagCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAgg < 1:1103899/93‑1 (MQ=255)
gagCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGc > 2:2286062/1‑93 (MQ=255)
gagCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGc < 1:3249240/93‑1 (MQ=255)
|
ATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGC > NC_000913/1568107‑1568285
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAG > NC_000913/1568104‑1568289
|
ATGATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCG < SRR4302533.5605638/94‑1 (MQ=60)
ATGATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCG > SRR4302533.4363318/1‑94 (MQ=60)
TGATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGT > SRR4302533.4519288/1‑94 (MQ=60)
GATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTC < SRR4302533.3287487/94‑1 (MQ=60)
GATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTC < SRR4302533.5453037/94‑1 (MQ=60)
GATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTC < SRR4302533.5328309/94‑1 (MQ=60)
ATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCG > SRR4302533.3793932/1‑94 (MQ=60)
ATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCG < SRR4302533.3844068/94‑1 (MQ=60)
TGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGG < SRR4302533.565711/94‑1 (MQ=60)
AGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGACCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGG < SRR4302533.991463/94‑1 (MQ=60)
GTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAAT > SRR4302533.5126285/1‑94 (MQ=60)
TGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATA < SRR4302533.5047869/94‑1 (MQ=60)
GCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAAC < SRR4302533.3882994/94‑1 (MQ=60)
GCAATAGTTTTGGTAATGGGGTCTTCATGCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAAC < SRR4302533.5251039/94‑1 (MQ=60)
CAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACC > SRR4302533.6316853/1‑94 (MQ=60)
AATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCA < SRR4302533.52132/94‑1 (MQ=60)
ATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTGGGAATAAAACCAA > SRR4302533.1297463/1‑94 (MQ=60)
ATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAA > SRR4302533.3335209/1‑94 (MQ=60)
TAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAAT < SRR4302533.5431422/94‑1 (MQ=60)
TAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAAT < SRR4302533.1344190/94‑1 (MQ=60)
AGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATG > SRR4302533.5182804/1‑94 (MQ=60)
AGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATG < SRR4302533.4102023/94‑1 (MQ=60)
TTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGC < SRR4302533.124977/94‑1 (MQ=60)
TTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCG < SRR4302533.2092243/94‑1 (MQ=60)
TTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCG < SRR4302533.4573786/94‑1 (MQ=60)
TGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGAT < SRR4302533.4745845/94‑1 (MQ=60)
TGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTCCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGAT < SRR4302533.3396167/94‑1 (MQ=60)
GTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTT < SRR4302533.1648935/94‑1 (MQ=60)
TAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTG < SRR4302533.2851713/94‑1 (MQ=60)
TAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTG > SRR4302533.1199423/1‑94 (MQ=60)
TAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTG > SRR4302533.4183088/1‑94 (MQ=60)
TAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTG < SRR4302533.5588557/94‑1 (MQ=60)
ATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCA > SRR4302533.5194611/1‑94 (MQ=60)
ATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCA > SRR4302533.5628111/1‑94 (MQ=60)
GGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGA > SRR4302533.3644936/1‑94 (MQ=60)
GGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGAT < SRR4302533.5948322/94‑1 (MQ=60)
GGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATA < SRR4302533.1704045/94‑1 (MQ=60)
TCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGC > SRR4302533.4527679/1‑94 (MQ=60)
TCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGC < SRR4302533.6127710/94‑1 (MQ=60)
TCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAA > SRR4302533.3885103/1‑94 (MQ=60)
ATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAAT > SRR4302533.1683166/1‑94 (MQ=60)
TTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATG < SRR4302533.5641802/94‑1 (MQ=60)
AGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGA > SRR4302533.1813607/1‑94 (MQ=60)
AGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGA > SRR4302533.2026339/1‑94 (MQ=60)
AGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGA < SRR4302533.4197437/94‑1 (MQ=60)
CGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATC > SRR4302533.4473405/1‑94 (MQ=60)
CGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATC < SRR4302533.4418309/94‑1 (MQ=60)
CGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATC < SRR4302533.76995/94‑1 (MQ=60)
GCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCG > SRR4302533.2078761/1‑94 (MQ=60)
CTGGCCATTTAAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGC > SRR4302533.6338560/1‑94 (MQ=60)
TGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCT > SRR4302533.3210332/1‑94 (MQ=60)
TGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCT > SRR4302533.2811055/1‑94 (MQ=60)
GGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTG < SRR4302533.5030548/94‑1 (MQ=60)
GGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTG < SRR4302533.4330955/94‑1 (MQ=60)
GGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTG < SRR4302533.6074911/94‑1 (MQ=60)
GCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGC < SRR4302533.5383724/94‑1 (MQ=60)
CATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAA > SRR4302533.4210795/1‑94 (MQ=60)
ATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAA > SRR4302533.4408350/1‑94 (MQ=60)
TTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAAT < SRR4302533.1103737/94‑1 (MQ=60)
TTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAAT < SRR4302533.2361412/94‑1 (MQ=60)
CAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCC > SRR4302533.2376873/1‑94 (MQ=60)
AGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCC > SRR4302533.4395681/1‑94 (MQ=60)
AGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCC < SRR4302533.2496545/94‑1 (MQ=60)
GGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCA > SRR4302533.3267746/1‑94 (MQ=60)
GATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAT < SRR4302533.1923228/94‑1 (MQ=60)
GATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAT < SRR4302533.4734932/94‑1 (MQ=60)
GATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAT < SRR4302533.5034780/94‑1 (MQ=60)
ATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATC < SRR4302533.4415373/94‑1 (MQ=60)
ATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATC > SRR4302533.1206247/1‑94 (MQ=60)
TGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCT < SRR4302533.4257159/94‑1 (MQ=60)
GTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTC < SRR4302533.1055748/94‑1 (MQ=60)
TAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCG > SRR4302533.668607/1‑94 (MQ=60)
AGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGG > SRR4302533.4174269/1‑94 (MQ=60)
AGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGG > SRR4302533.5406343/1‑94 (MQ=60)
GGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGC < SRR4302533.4095316/94‑1 (MQ=60)
GAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCC < SRR4302533.1269407/94‑1 (MQ=60)
GAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCC < SRR4302533.1146297/94‑1 (MQ=60)
GTGCCCCTAACACGAAATAGAGCGTCGGGATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAG > SRR4302533.3936232/1‑94 (MQ=60)
GCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAG < SRR4302533.5368102/94‑1 (MQ=60)
GCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAG > SRR4302533.3579490/1‑94 (MQ=60)
GCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAG < SRR4302533.1929935/94‑1 (MQ=60)
CGTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAT < SRR4302533.563874/94‑1 (MQ=60)
CCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAT < SRR4302533.5451569/94‑1 (MQ=60)
CCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAT < SRR4302533.3798651/94‑1 (MQ=60)
CTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATT > SRR4302533.1574253/1‑94 (MQ=60)
CACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGAT > SRR4302533.772114/1‑94 (MQ=60)
ACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATA < SRR4302533.3384753/94‑1 (MQ=60)
CGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATAC > SRR4302533.3197534/1‑94 (MQ=60)
CGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATAC > SRR4302533.2230767/1‑94 (MQ=60)
AAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCC > SRR4302533.4391616/1‑94 (MQ=60)
AATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCA > SRR4302533.4910009/1‑94 (MQ=60)
AATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCA < SRR4302533.1089410/94‑1 (MQ=60)
TAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGG < SRR4302533.4896438/94‑1 (MQ=60)
TAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGG < SRR4302533.4370976/94‑1 (MQ=60)
AGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGC < SRR4302533.1110437/94‑1 (MQ=60)
GAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCG < SRR4302533.3269275/94‑1 (MQ=60)
GAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCG < SRR4302533.4490997/94‑1 (MQ=60)
AGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGA > SRR4302533.1946811/1‑94 (MQ=60)
GCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAA < SRR4302533.5941297/94‑1 (MQ=60)
GCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAA < SRR4302533.4172720/94‑1 (MQ=60)
CGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAG < SRR4302533.64746/94‑1 (MQ=60)
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ATGATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGCGAAG > NC_000913/1568104‑1568289
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
