Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,689,391 |
G→A |
intergenic (+7/+219) |
ydgA → / ← uidC |
hypothetical protein/membrane‑associated protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,689,391 | 0 | G | A | 100.0%
| 697.1
/ NA
| 187 | intergenic (+7/+219) | ydgA/uidC | hypothetical protein/membrane‑associated protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (89/98); total (89/98) |
Only 100 of 189 total aligned reads displayed.
AAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTT > NC_000913/1689301‑1689480
|
aaaTGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCa < 1:1967346/93‑1 (MQ=255)
aTGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCaaa < 2:1560703/93‑1 (MQ=255)
tGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCaaaa > 2:57868/1‑93 (MQ=255)
gTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAAc < 1:5539738/93‑1 (MQ=255)
gTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAAc < 2:2296985/93‑1 (MQ=255)
cGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGc < 1:901412/93‑1 (MQ=255)
cGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGc > 1:3431682/1‑93 (MQ=255)
tAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCgg > 1:1529016/1‑93 (MQ=255)
tAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCgg > 2:2516278/1‑93 (MQ=255)
agaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGaa < 2:1662303/93‑1 (MQ=255)
gaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAt > 2:100003/1‑93 (MQ=255)
aTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAtt < 1:62912/93‑1 (MQ=255)
aTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAtt > 2:5967428/1‑93 (MQ=255)
ttttGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAttt > 2:5154448/1‑93 (MQ=255)
tttGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAtttt > 2:1406215/1‑93 (MQ=255)
tgttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCa < 2:1391630/93‑1 (MQ=255)
gttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAc < 1:1046407/93‑1 (MQ=255)
gttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAc > 1:530690/1‑93 (MQ=255)
ttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACt > 1:6191554/1‑93 (MQ=255)
tgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTc < 1:5428724/93‑1 (MQ=255)
ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc > 1:3212440/1‑93 (MQ=255)
ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc < 1:5307394/93‑1 (MQ=255)
ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc < 1:4583012/93‑1 (MQ=255)
ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc > 1:4019824/1‑93 (MQ=255)
ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc < 2:3403582/93‑1 (MQ=255)
ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc < 2:373106/93‑1 (MQ=255)
gCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCg > 1:2358054/1‑93 (MQ=255)
gCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCg < 2:1800212/93‑1 (MQ=255)
cATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCgg < 1:5154546/93‑1 (MQ=255)
aTGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGc < 1:4780879/93‑1 (MQ=255)
tGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCg < 2:5393039/93‑1 (MQ=255)
gTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGt > 1:2853788/1‑93 (MQ=255)
tttGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGtt < 2:1900146/93‑1 (MQ=255)
ttGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGttt < 2:722191/93‑1 (MQ=255)
gCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTc < 2:622332/93‑1 (MQ=255)
cGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCa > 1:2340602/1‑93 (MQ=255)
gATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCAt < 2:4232741/93‑1 (MQ=255)
aTGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATc < 2:4693368/93‑1 (MQ=255)
aTGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATc > 2:3498953/1‑93 (MQ=255)
tGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCt > 2:5175848/1‑93 (MQ=255)
tGCCAGCTCTTAACGTTCCGGCTGTACCGGCAAGTCAGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCt > 1:1165795/1‑93 (MQ=255)
gCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTg < 1:3760812/93‑1 (MQ=255)
ccAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGa > 2:4655992/1‑93 (MQ=255)
cAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGaa < 2:1992684/93‑1 (MQ=255)
gCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGaaaa < 2:246260/93‑1 (MQ=255)
gCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGaaaa > 1:6130970/1‑93 (MQ=255)
ctctTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaac > 1:1249280/1‑93 (MQ=255)
ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaa < 1:3877438/93‑1 (MQ=255)
ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaa > 2:2801312/1‑93 (MQ=255)
ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaa > 1:2635816/1‑93 (MQ=255)
tAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaac < 1:3309102/93‑1 (MQ=255)
aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAcc < 1:1761308/93‑1 (MQ=255)
aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAcc < 1:2178997/93‑1 (MQ=255)
aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAcc > 2:3329553/1‑93 (MQ=255)
aCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCa < 1:5860565/93‑1 (MQ=255)
cGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCag < 2:254973/93‑1 (MQ=255)
gTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAGCGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCaga < 2:1539502/93‑1 (MQ=255)
ttCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCagag > 1:3053376/1‑93 (MQ=255)
ttCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCagag < 2:1971008/93‑1 (MQ=255)
tCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAgaga < 1:2468586/93‑1 (MQ=255)
gCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGc < 2:3087127/93‑1 (MQ=255)
gCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGc > 2:4789689/1‑93 (MQ=255)
gTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTg > 1:451439/1‑93 (MQ=255)
ccGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATg < 2:3666526/93‑1 (MQ=255)
gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc < 1:5777203/93‑1 (MQ=255)
gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc > 1:3342771/1‑93 (MQ=255)
gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc < 1:2111152/93‑1 (MQ=255)
cAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCt < 2:5662779/93‑1 (MQ=255)
cAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCt < 1:3796005/93‑1 (MQ=255)
cAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCt > 1:2779175/1‑93 (MQ=255)
aaTTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTa < 1:3668790/93‑1 (MQ=255)
aTTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTAc > 1:3164823/1‑93 (MQ=255)
gcagcaGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTa > 1:1290146/1‑93 (MQ=255)
gcagcaGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTa > 1:607026/1‑93 (MQ=255)
gcagcaGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGACTGCCTGATGCGCTACGCTTa < 2:5491463/93‑1 (MQ=255)
agcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc > 2:118978/1‑93 (MQ=255)
agcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc > 2:4036450/1‑93 (MQ=255)
gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa < 1:1627206/93‑1 (MQ=255)
gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa < 2:708737/93‑1 (MQ=255)
gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa > 1:4044899/1‑93 (MQ=255)
gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa < 1:2757874/93‑1 (MQ=255)
gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa < 1:1401483/93‑1 (MQ=255)
cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg < 1:4948798/93‑1 (MQ=255)
cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg < 2:2185356/93‑1 (MQ=255)
cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg > 1:5326310/1‑93 (MQ=255)
cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg < 1:838999/93‑1 (MQ=255)
agTAATTCACGACCAAAACGTCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAgg < 1:4203991/93‑1 (MQ=255)
gTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGc < 2:4483706/93‑1 (MQ=255)
gTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGc < 1:402752/93‑1 (MQ=255)
gTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTAATGCGCTACGCTTATCAGGc < 1:1327936/93‑1 (MQ=255)
tAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGcc > 1:1909685/1‑93 (MQ=255)
aaTTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCt > 1:257071/1‑93 (MQ=255)
aTTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTa < 1:1573129/93‑1 (MQ=255)
ttCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAc > 2:3989972/1‑93 (MQ=255)
ttCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAc > 2:1687037/1‑93 (MQ=255)
ttCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAc < 1:5810849/93‑1 (MQ=255)
tCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAcc < 1:1622266/93‑1 (MQ=255)
cACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCt < 1:3326709/93‑1 (MQ=255)
aCGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCtt < 1:351961/93‑1 (MQ=255)
aCGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCtt > 1:1039395/1‑93 (MQ=255)
|
AAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTT > NC_000913/1689301‑1689480
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCC > NC_000913/1689298‑1689484
|
CAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGA > SRR4302533.3898520/1‑94 (MQ=60)
CAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGA > SRR4302533.1773310/1‑94 (MQ=60)
AAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAA < SRR4302533.1979368/94‑1 (MQ=60)
AATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAA < SRR4302533.3142899/94‑1 (MQ=60)
ATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAA > SRR4302533.5346663/1‑94 (MQ=60)
ATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAA > SRR4302533.3324140/1‑94 (MQ=60)
GTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACG > SRR4302533.2591616/1‑94 (MQ=60)
GTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACG < SRR4302533.5573192/94‑1 (MQ=60)
TCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGC > SRR4302533.5813721/1‑94 (MQ=60)
TCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGC > SRR4302533.3452882/1‑94 (MQ=60)
CGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCC > SRR4302533.3522716/1‑94 (MQ=60)
CGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCC < SRR4302533.906700/94‑1 (MQ=60)
CGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCC > SRR4302533.130093/1‑94 (MQ=60)
TTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGG > SRR4302533.1538212/1‑94 (MQ=60)
TAGAAGATTTTGTTGGCATGTTTGCGATGCTAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGA < SRR4302533.1600136/94‑1 (MQ=60)
TAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGA < SRR4302533.6122451/94‑1 (MQ=60)
AGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAG > SRR4302533.13529/1‑94 (MQ=60)
AGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAG > SRR4302533.1485328/1‑94 (MQ=60)
GATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATT < SRR4302533.3350482/94‑1 (MQ=60)
ATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTT > SRR4302533.2855227/1‑94 (MQ=60)
ATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTT > SRR4302533.1944053/1‑94 (MQ=60)
ATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTT < SRR4302533.4067289/94‑1 (MQ=60)
ATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTT < SRR4302533.63325/94‑1 (MQ=60)
TTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACCACCAAAACGCCGGAGAATTTTC < SRR4302533.5865844/94‑1 (MQ=60)
TGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAC > SRR4302533.533846/1‑94 (MQ=60)
TGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAC < SRR4302533.1287046/94‑1 (MQ=60)
TGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAC < SRR4302533.1171280/94‑1 (MQ=60)
TGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAC > SRR4302533.2412380/1‑94 (MQ=60)
GTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACT > SRR4302533.6228711/1‑94 (MQ=60)
GTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACT > SRR4302533.5728992/1‑94 (MQ=60)
GTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACT < SRR4302533.1052555/94‑1 (MQ=60)
TTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTC < SRR4302533.1538449/94‑1 (MQ=60)
TGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCC > SRR4302533.3232226/1‑94 (MQ=60)
TGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCC < SRR4302533.5461417/94‑1 (MQ=60)
TGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCC > SRR4302533.4044302/1‑94 (MQ=60)
GGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCG > SRR4302533.2372629/1‑94 (MQ=60)
GGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCG < SRR4302533.5339202/94‑1 (MQ=60)
GGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCG < SRR4302533.4610779/94‑1 (MQ=60)
GCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGG > SRR4302533.3818649/1‑94 (MQ=60)
CATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGC < SRR4302533.5185675/94‑1 (MQ=60)
ATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCG < SRR4302533.4809845/94‑1 (MQ=60)
TGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGT > SRR4302533.2871345/1‑94 (MQ=60)
TGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGT > SRR4302533.3185817/1‑94 (MQ=60)
GTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTT > SRR4302533.3442679/1‑94 (MQ=60)
TTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTT < SRR4302533.2759178/94‑1 (MQ=60)
GCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCA > SRR4302533.2355094/1‑94 (MQ=60)
ATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCT < SRR4302533.6245570/94‑1 (MQ=60)
ATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCT < SRR4302533.4179395/94‑1 (MQ=60)
ATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAAGTCAGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCT > SRR4302533.1172787/1‑94 (MQ=60)
GCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGA < SRR4302533.3783862/94‑1 (MQ=60)
CAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAA > SRR4302533.5086193/1‑94 (MQ=60)
AGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAA > SRR4302533.6167913/1‑94 (MQ=60)
GCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAAC > SRR4302533.1256742/1‑94 (MQ=60)
TCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAA > SRR4302533.887643/1‑94 (MQ=60)
CTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAA > SRR4302533.2652014/1‑94 (MQ=60)
CTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAA < SRR4302533.4466806/94‑1 (MQ=60)
TTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAC < SRR4302533.3901101/94‑1 (MQ=60)
TTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAC < SRR4302533.3901102/94‑1 (MQ=60)
TTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAC > SRR4302533.5333310/1‑94 (MQ=60)
TAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACC < SRR4302533.3329535/94‑1 (MQ=60)
TAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACC < SRR4302533.2982183/94‑1 (MQ=60)
TAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACC < SRR4302533.2356431/94‑1 (MQ=60)
AACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCA < SRR4302533.1772040/94‑1 (MQ=60)
AACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCA < SRR4302533.2192431/94‑1 (MQ=60)
AACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCA > SRR4302533.5533250/1‑94 (MQ=60)
ACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAG < SRR4302533.5895995/94‑1 (MQ=60)
GTTCCGGCTGTACCGTCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAG < SRR4302533.1199284/94‑1 (MQ=60)
GTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAG > SRR4302533.3072080/1‑94 (MQ=60)
GTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAG < SRR4302533.3992306/94‑1 (MQ=60)
TTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGA < SRR4302533.939461/94‑1 (MQ=60)
TCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGAT < SRR4302533.2483812/94‑1 (MQ=60)
CCGGCTGTACCGGCAATTCCGCAGCAGTAGTTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGGTT < SRR4302533.3670808/94‑1 (MQ=60)
CCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATT > SRR4302533.177903/1‑94 (MQ=60)
CGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTG > SRR4302533.2185322/1‑94 (MQ=60)
GGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGC > SRR4302533.5963745/1‑94 (MQ=60)
GGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGC > SRR4302533.1980056/1‑94 (MQ=60)
CTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCT > SRR4302533.5358670/1‑94 (MQ=60)
TGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTG > SRR4302533.454140/1‑94 (MQ=60)
TGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTG < SRR4302533.4563736/94‑1 (MQ=60)
GGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGC > SRR4302533.3363431/1‑94 (MQ=60)
GCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCT > SRR4302533.2796247/1‑94 (MQ=60)
GCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCT < SRR4302533.2124174/94‑1 (MQ=60)
GCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCT < SRR4302533.5812098/94‑1 (MQ=60)
CAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTA < SRR4302533.3819239/94‑1 (MQ=60)
AATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTAC < SRR4302533.3691338/94‑1 (MQ=60)
AATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTAC < SRR4302533.4883297/94‑1 (MQ=60)
AATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTAC > SRR4302533.3184300/1‑94 (MQ=60)
TCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCT > SRR4302533.1696837/1‑94 (MQ=60)
CCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTT < SRR4302533.712734/94‑1 (MQ=60)
CGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTA > SRR4302533.610598/1‑94 (MQ=60)
CGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTA > SRR4302533.4766762/1‑94 (MQ=60)
CGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTA > SRR4302533.1297913/1‑94 (MQ=60)
AGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCA > SRR4302533.4069517/1‑94 (MQ=60)
GCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAG < SRR4302533.2774782/94‑1 (MQ=60)
GCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAG > SRR4302533.5358230/1‑94 (MQ=60)
GCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAG < SRR4302533.1409933/94‑1 (MQ=60)
GCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAG > SRR4302533.2775472/1‑94 (MQ=60)
GCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAG < SRR4302533.1637064/94‑1 (MQ=60)
CAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGG < SRR4302533.4978767/94‑1 (MQ=60)
CAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGG < SRR4302533.843912/94‑1 (MQ=60)
AGTAATTCACGACCAAAACGTCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGC < SRR4302533.4229422/94‑1 (MQ=60)
GTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCC > SRR4302533.1921336/1‑94 (MQ=60)
GTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCC < SRR4302533.405178/94‑1 (MQ=60)
GTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTAATGCGCTACGCTTATCAGGCC < SRR4302533.1335904/94‑1 (MQ=60)
TAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCT > SRR4302533.258637/1‑94 (MQ=60)
AATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTA > SRR4302533.3752970/1‑94 (MQ=60)
AATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTA < SRR4302533.23079/94‑1 (MQ=60)
ATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAC < SRR4302533.1582602/94‑1 (MQ=60)
TTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACC < SRR4302533.5845941/94‑1 (MQ=60)
TCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCT < SRR4302533.1632097/94‑1 (MQ=60)
CACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTT < SRR4302533.3347264/94‑1 (MQ=60)
CACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTT > SRR4302533.1045504/1‑94 (MQ=60)
ACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTT < SRR4302533.354108/94‑1 (MQ=60)
ACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCC < SRR4302533.252015/94‑1 (MQ=60)
ACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCC < SRR4302533.3230976/94‑1 (MQ=60)
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CAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCC > NC_000913/1689298‑1689484
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
