Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,232,157 |
T→C |
S35S (AGT→AGC) |
b2146 → |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,232,157 | 0 | T | C | 99.5%
| 611.7
/ NA
| 190 | S35S (AGT→AGC) | b2146 | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (91/98); minor base A (1/0); total (92/98) |
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 194 total aligned reads displayed.
TTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGTCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCG > NC_000913/2232067‑2232245
|
ttATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCa < 2:560799/93‑1 (MQ=255)
aTCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAgg > 2:1112536/1‑93 (MQ=255)
tCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGc > 1:988546/1‑93 (MQ=255)
tGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCTATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCtt < 1:2776165/93‑1 (MQ=255)
ggATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGACAGGCTTg > 1:2570757/1‑93 (MQ=255)
gATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGc < 1:4934197/93‑1 (MQ=255)
aTGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGcc < 1:854435/93‑1 (MQ=255)
tGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGccc > 1:5016251/1‑93 (MQ=255)
actcactcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGc > 2:4297324/1‑93 (MQ=255)
actcactcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGc < 1:812831/93‑1 (MQ=255)
actcaatcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTAACGACGCTCCCTGTAGCCAGGCTTGTGCGGc > 2:4409549/1‑93 (MQ=255)
tcactcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGcac < 2:3669764/93‑1 (MQ=255)
actcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAg > 2:4442408/1‑93 (MQ=255)
ctcGGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGa < 1:4192105/93‑1 (MQ=255)
ctcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGa > 2:1365468/1‑93 (MQ=255)
ctcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGa > 1:1280141/1‑93 (MQ=255)
ctcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGa > 2:655973/1‑93 (MQ=255)
tcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGAc < 2:1732388/93‑1 (MQ=255)
tcCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGAc > 1:1249984/1‑93 (MQ=255)
ccGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGAcc > 1:730298/1‑93 (MQ=255)
cGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCg > 1:2565137/1‑93 (MQ=255)
gCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGAt > 1:2098700/1‑93 (MQ=255)
cTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATTTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATc < 1:1944672/93‑1 (MQ=255)
cTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATc > 2:2289548/1‑93 (MQ=255)
ttttACGTCTTTACTGGCGATTAAATAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATcc < 2:4018982/93‑1 (MQ=255)
ttttACGTCTTTACTGGCGATTAAAGAATCCTCTCGCTTTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATcc < 1:3501408/93‑1 (MQ=255)
ttttACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATcc > 1:3953294/1‑93 (MQ=255)
tttACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCg < 2:3604/93‑1 (MQ=255)
ttACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCgg < 1:2431399/93‑1 (MQ=255)
ttACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCgg < 2:297054/93‑1 (MQ=255)
tACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCggg > 1:5654676/1‑93 (MQ=255)
tACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCggg < 2:2165384/93‑1 (MQ=255)
tACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCggg < 1:4126116/93‑1 (MQ=255)
aCGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCgggg < 2:1597817/93‑1 (MQ=255)
cGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGa > 1:4802113/1‑93 (MQ=255)
gTCTTTACTGGCGATTAAAGTAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGaa < 2:1343797/93‑1 (MQ=255)
tCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGCTCCGGGGaaa > 2:5123173/1‑93 (MQ=255)
tttACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAAtt > 1:5976429/1‑93 (MQ=255)
tACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTa > 1:4582360/1‑93 (MQ=255)
cTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTAtt < 2:2387956/93‑1 (MQ=255)
cTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTAtt < 1:2753965/93‑1 (MQ=255)
cTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTAtt < 2:4777751/93‑1 (MQ=255)
tGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTc < 1:395522/93‑1 (MQ=255)
tGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTc > 2:2315790/1‑93 (MQ=255)
tGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTc < 2:5167924/93‑1 (MQ=255)
tGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTc > 1:4857100/1‑93 (MQ=255)
tGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTc < 2:5373373/93‑1 (MQ=255)
gCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGc < 1:3843466/93‑1 (MQ=255)
gATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTc > 1:2549095/1‑93 (MQ=255)
ttAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCaa < 2:4203089/93‑1 (MQ=255)
ttAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCaa < 1:2078637/93‑1 (MQ=255)
tAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAAt < 2:4506840/93‑1 (MQ=255)
tAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAAt > 2:1753461/1‑93 (MQ=255)
aaaGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATc < 2:3736334/93‑1 (MQ=255)
aagaagCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCt > 2:1780905/1‑93 (MQ=255)
agaagCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTa > 1:2115168/1‑93 (MQ=255)
agaagCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTa > 2:2928285/1‑93 (MQ=255)
agCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACtt < 1:284492/93‑1 (MQ=255)
agCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACtt < 1:3622482/93‑1 (MQ=255)
agCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACtt < 1:5059624/93‑1 (MQ=255)
agCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACtt > 1:1097044/1‑93 (MQ=255)
ccTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTc < 2:3264362/93‑1 (MQ=255)
ccTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTc < 1:1437412/93‑1 (MQ=255)
ctctCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCg < 1:1745822/93‑1 (MQ=255)
tctcGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGt > 1:974264/1‑93 (MQ=255)
tctcGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGt > 2:1865512/1‑93 (MQ=255)
tctcGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGt > 1:1850344/1‑93 (MQ=255)
tctcGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGt > 1:4801896/1‑93 (MQ=255)
cGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAt < 2:3169554/93‑1 (MQ=255)
cGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAt > 2:4111228/1‑93 (MQ=255)
gCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAtt > 2:4258964/1‑93 (MQ=255)
gCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAtt > 1:531092/1‑93 (MQ=255)
gCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAtt > 2:5665169/1‑93 (MQ=255)
cTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAttt < 1:4257977/93‑1 (MQ=255)
tGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAtttt > 2:2094176/1‑93 (MQ=255)
tGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAtttt > 1:5474312/1‑93 (MQ=255)
ttattaGGTCACGACGCTCACTGTAGCTAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTaaa < 2:1480188/93‑1 (MQ=255)
attatGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAgg < 1:238315/93‑1 (MQ=255)
attatGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAgg < 1:4697693/93‑1 (MQ=255)
gTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTg > 1:5262559/1‑93 (MQ=255)
tCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGc < 1:642300/93‑1 (MQ=255)
tCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGc < 2:2606851/93‑1 (MQ=255)
cACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACCGACCGATCCGGGGAAATTTATTCGCTCCATCTACTTTCGTTATTTTCACGGCGCTGcc > 1:5920906/1‑93 (MQ=255)
cgacgCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCga < 2:3532944/93‑1 (MQ=255)
gacgCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCgag < 2:5557503/93‑1 (MQ=255)
gacgCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCgag > 2:6094525/1‑93 (MQ=255)
acgCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCgaga > 2:1199888/1‑93 (MQ=255)
cgCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGAc < 2:5857626/93‑1 (MQ=255)
cgCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGAc < 1:4457527/93‑1 (MQ=255)
cTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACaa > 1:157959/1‑93 (MQ=255)
cTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACaa < 2:2734950/93‑1 (MQ=255)
tCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAAt > 2:5884254/1‑93 (MQ=255)
cccTGTAGCCAGGCTTGCCCGGCTCAGGCCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAAtt < 2:1962055/93‑1 (MQ=255)
cccTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAAtt < 1:3897056/93‑1 (MQ=255)
cccTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAAtt < 1:5363703/93‑1 (MQ=255)
ccTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTc < 1:1032272/93‑1 (MQ=255)
ccTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTc > 2:808334/1‑93 (MQ=255)
cTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTcg > 2:3803644/1‑93 (MQ=255)
gTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTcgcg > 2:3289409/1‑93 (MQ=255)
gTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTcgcg > 1:1109817/1‑93 (MQ=255)
|
TTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGTCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCG > NC_000913/2232067‑2232245
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGTCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCGAAAAT > NC_000913/2232064‑2232250
|
AAATTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGC < SRR4302533.3270964/94‑1 (MQ=60)
AATTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCC > SRR4302533.5739933/1‑94 (MQ=60)
ATTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCA < SRR4302533.4777851/94‑1 (MQ=60)
TATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGG < SRR4302533.1284107/94‑1 (MQ=60)
ATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGC > SRR4302533.994330/1‑94 (MQ=60)
ATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGC > SRR4302533.418491/1‑94 (MQ=60)
TGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCTATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTG < SRR4302533.2793216/94‑1 (MQ=60)
TGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGACAGGCTTG > SRR4302533.2586576/1‑94 (MQ=60)
GATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCC < SRR4302533.4964075/94‑1 (MQ=60)
ATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCC > SRR4302533.5046640/1‑94 (MQ=60)
ATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCC < SRR4302533.859442/94‑1 (MQ=60)
TGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCG > SRR4302533.535983/1‑94 (MQ=60)
GAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGG > SRR4302533.5046697/1‑94 (MQ=60)
ACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCA > SRR4302533.5525452/1‑94 (MQ=60)
ACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCA < SRR4302533.817590/94‑1 (MQ=60)
CTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCAC > SRR4302533.839258/1‑94 (MQ=60)
CCCTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAG < SRR4302533.4713617/94‑1 (MQ=60)
CCTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGA < SRR4302533.5741854/94‑1 (MQ=60)
ACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGA > SRR4302533.1287836/1‑94 (MQ=60)
CTCGGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGAC < SRR4302533.4217477/94‑1 (MQ=60)
CTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGAC > SRR4302533.1257450/1‑94 (MQ=60)
TCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACC > SRR4302533.734603/1‑94 (MQ=60)
CCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCG < SRR4302533.691364/94‑1 (MQ=60)
CCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCG > SRR4302533.2580922/1‑94 (MQ=60)
CGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGA > SRR4302533.1986709/1‑94 (MQ=60)
CGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGA < SRR4302533.282027/94‑1 (MQ=60)
GGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGAT < SRR4302533.4907030/94‑1 (MQ=60)
GGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGAT > SRR4302533.2111648/1‑94 (MQ=60)
GGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGAT > SRR4302533.4970105/1‑94 (MQ=60)
GCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATC < SRR4302533.8636/94‑1 (MQ=60)
CTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATTTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCC < SRR4302533.1956531/94‑1 (MQ=60)
CTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCC > SRR4302533.3977399/1‑94 (MQ=60)
CTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCC < SRR4302533.1110616/94‑1 (MQ=60)
CTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCC > SRR4302533.4871932/1‑94 (MQ=60)
CTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCC < SRR4302533.5145716/94‑1 (MQ=60)
TTTTACGTCTTTACTGGCGATTAAAGAATCCTCTCGCTTTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCG < SRR4302533.3523000/94‑1 (MQ=60)
tctCGTCTTTCCTGGCGATTAAAGAATCCTCTCGCTGTTTATTATGTCACGCCGCGCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGG < SRR4302533.603210/91‑1 (MQ=60)
TTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGG < SRR4302533.2446427/94‑1 (MQ=60)
TTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGG < SRR4302533.1139364/94‑1 (MQ=60)
TTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGG > SRR4302533.5688850/1‑94 (MQ=60)
TACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGG < SRR4302533.4151162/94‑1 (MQ=60)
TACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGG > SRR4302533.479030/1‑94 (MQ=60)
ACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGA > SRR4302533.4831200/1‑94 (MQ=60)
CGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAA > SRR4302533.2309440/1‑94 (MQ=60)
GTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAA > SRR4302533.1702887/1‑94 (MQ=60)
GTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAA > SRR4302533.2410336/1‑94 (MQ=60)
GTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAA < SRR4302533.5991017/94‑1 (MQ=60)
TCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACAGATCCGGGGAAAT > SRR4302533.3624993/1‑94 (MQ=60)
CTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATT > SRR4302533.6012626/1‑94 (MQ=60)
TTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTA > SRR4302533.4610126/1‑94 (MQ=60)
CTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTC < SRR4302533.3942218/94‑1 (MQ=60)
CTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTC > SRR4302533.4886535/1‑94 (MQ=60)
CTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTC < SRR4302533.2770855/94‑1 (MQ=60)
CTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTC < SRR4302533.2770854/94‑1 (MQ=60)
TGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCG < SRR4302533.397918/94‑1 (MQ=60)
GCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCT < SRR4302533.3866944/94‑1 (MQ=60)
CGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTC > SRR4302533.2564787/1‑94 (MQ=60)
CGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTC > SRR4302533.2110008/1‑94 (MQ=60)
ATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAA > SRR4302533.4129327/1‑94 (MQ=60)
TTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAAT < SRR4302533.2091429/94‑1 (MQ=60)
AAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCT > SRR4302533.1555866/1‑94 (MQ=60)
AAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTA > SRR4302533.2128213/1‑94 (MQ=60)
AAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTT > SRR4302533.1103541/1‑94 (MQ=60)
AAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTT < SRR4302533.2120676/94‑1 (MQ=60)
AGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTT < SRR4302533.5090199/94‑1 (MQ=60)
AGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTT < SRR4302533.286232/94‑1 (MQ=60)
AGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTT < SRR4302533.3644774/94‑1 (MQ=60)
CCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCG < SRR4302533.5324637/94‑1 (MQ=60)
CCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCG < SRR4302533.1446090/94‑1 (MQ=60)
CTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGT < SRR4302533.1756441/94‑1 (MQ=60)
CTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGT > SRR4302533.1861629/1‑94 (MQ=60)
CTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGT > SRR4302533.4830982/1‑94 (MQ=60)
CTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGT > SRR4302533.979984/1‑94 (MQ=60)
CTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGT > SRR4302533.447040/1‑94 (MQ=60)
CTCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAA < SRR4302533.3978984/94‑1 (MQ=60)
TCGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAAT < SRR4302533.4273432/94‑1 (MQ=60)
CGCTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATT > SRR4302533.534250/1‑94 (MQ=60)
CTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTT < SRR4302533.4283644/94‑1 (MQ=60)
CTGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTT > SRR4302533.5507310/1‑94 (MQ=60)
TGTTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTA < SRR4302533.4585906/94‑1 (MQ=60)
TTTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAA < SRR4302533.2575829/94‑1 (MQ=60)
TTATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAG < SRR4302533.5440833/94‑1 (MQ=60)
TATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGG < SRR4302533.762670/94‑1 (MQ=60)
TATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGG < SRR4302533.3902608/94‑1 (MQ=60)
ATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGC < SRR4302533.4726170/94‑1 (MQ=60)
ATTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGC < SRR4302533.239790/94‑1 (MQ=60)
TTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCG < SRR4302533.6091447/94‑1 (MQ=60)
TTATGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCG < SRR4302533.385191/94‑1 (MQ=60)
TGTCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTG > SRR4302533.5294148/1‑94 (MQ=60)
TCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACCGACCGATCCGGGGAAATTTATTCGCTCCATCTACTTTCGTTATTTTCACGGCGCTGCC > SRR4302533.5956695/1‑94 (MQ=60)
TCACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCC < SRR4302533.646077/94‑1 (MQ=60)
ACGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGA > SRR4302533.1405251/1‑94 (MQ=60)
CGACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAG > SRR4302533.3207539/1‑94 (MQ=60)
GACGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGA < SRR4302533.2695862/94‑1 (MQ=60)
CGCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACA < SRR4302533.4484482/94‑1 (MQ=60)
GCTCCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAA > SRR4302533.158966/1‑94 (MQ=60)
CCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTC < SRR4302533.5395923/94‑1 (MQ=60)
CCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTC < SRR4302533.3920836/94‑1 (MQ=60)
CCCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTC < SRR4302533.187925/94‑1 (MQ=60)
CCTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCG < SRR4302533.1038343/94‑1 (MQ=60)
CTGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGC > SRR4302533.1846976/1‑94 (MQ=60)
TGTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCG > SRR4302533.1116401/1‑94 (MQ=60)
GTAGCCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCGA < SRR4302533.2557753/94‑1 (MQ=60)
CCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCGAAAAT > SRR4302533.5484598/1‑94 (MQ=60)
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AAATTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGTCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCGAAAAT > NC_000913/2232064‑2232250
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
