Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,335,614 |
T→C |
E609E (GAA→GAG) |
gyrA ← |
DNA gyrase, subunit A, type II topoisomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,335,614 | 0 | T | C | 100.0%
| 705.1
/ NA
| 223 | E609E (GAA→GAG) | gyrA | DNA gyrase, subunit A, type II topoisomerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (97/126); total (97/126) |
Only 100 of 231 total aligned reads displayed.
CTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCTTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTC > NC_000913/2335524‑2335702
|
tCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCCGACGACCGCGCGCGCCACGAGTGGCCTcc > 2:348382/1‑93 (MQ=255)
cGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCg < 2:818622/93‑1 (MQ=255)
cGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCg < 2:4545351/93‑1 (MQ=255)
ggTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCgg > 2:3155450/1‑93 (MQ=255)
ggTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCgg > 2:385258/1‑93 (MQ=255)
gTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGGGCCACGAGTGGGCTCCGGc > 1:445053/1‑93 (MQ=255)
tCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCa > 2:4452286/1‑93 (MQ=255)
cACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCaa > 2:179405/1‑93 (MQ=255)
ccTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAAc < 2:4295831/92‑1 (MQ=255)
aCTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAAc < 1:3719876/93‑1 (MQ=255)
aCTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAAc < 2:2063590/93‑1 (MQ=255)
aCTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGCGGCCTCCGGCAAc > 1:1749085/1‑93 (MQ=255)
cTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACt < 2:1564724/93‑1 (MQ=255)
tGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTg > 2:888222/1‑93 (MQ=255)
tGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTg > 2:3527501/1‑93 (MQ=255)
cAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATa < 1:5247591/93‑1 (MQ=255)
aGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATaa > 1:2492926/1‑93 (MQ=255)
aGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATaa > 1:5737471/1‑93 (MQ=255)
ggATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATaaa > 2:1829428/1‑93 (MQ=255)
ggATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGAACGCGCGCGCCACGAGTGGCCTCCGGCAACTGATaaa > 1:3492985/1‑93 (MQ=255)
gATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGGGGCCTCCGGCCACTGATAAAc > 1:3430426/1‑93 (MQ=255)
aTCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACt > 1:4136795/1‑93 (MQ=255)
tCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACtt > 1:3620749/1‑93 (MQ=255)
tCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACtt < 2:5493077/93‑1 (MQ=255)
gCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTc < 1:6011724/93‑1 (MQ=255)
aGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCAt > 2:59626/1‑93 (MQ=255)
gTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATc > 1:410951/1‑93 (MQ=255)
tGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCg < 1:1515238/93‑1 (MQ=255)
gATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGa > 1:3903833/1‑93 (MQ=255)
aTACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGaa > 2:3918092/1‑93 (MQ=255)
aTACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGaa > 1:2738851/1‑93 (MQ=255)
tgcGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAAt < 2:1143528/91‑1 (MQ=255)
tACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAAt < 1:764947/93‑1 (MQ=255)
aCGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGCCCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATa > 1:4433824/1‑93 (MQ=255)
aCGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATa < 1:4381557/93‑1 (MQ=255)
aCGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATa < 2:4918251/93‑1 (MQ=255)
cGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAg > 1:2647853/1‑93 (MQ=255)
cGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAg < 1:1935994/93‑1 (MQ=255)
gTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGa < 1:2971974/93‑1 (MQ=255)
gTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGa < 2:2848563/93‑1 (MQ=255)
ttCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGAc < 2:2521003/93‑1 (MQ=255)
ttCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGAc < 2:328796/93‑1 (MQ=255)
tCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGAcg < 1:2333243/93‑1 (MQ=255)
tCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGa < 2:742876/93‑1 (MQ=255)
cTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCACGCGCCACGAGTGGCCTACGGCAACTGATAAACTTTCATCGAATAGAAGCGccc > 1:4572781/1‑93 (MQ=255)
tGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCa < 1:1204736/93‑1 (MQ=255)
gCTCAAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGTCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCAc < 1:787471/93‑1 (MQ=255)
cTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACg < 1:869172/93‑1 (MQ=255)
tCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACgg < 1:2710588/93‑1 (MQ=255)
ccAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGc < 1:2878003/93‑1 (MQ=255)
ccAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGc < 2:6280524/93‑1 (MQ=255)
aGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTg > 2:1894321/1‑93 (MQ=255)
gCGGCAGCAGTTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTgg < 2:925677/93‑1 (MQ=255)
gCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAGACTTTCATCGAATAGACGCGACCACGGCTgg < 2:1720780/93‑1 (MQ=255)
cGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGga < 1:3844171/93‑1 (MQ=255)
cGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGga < 1:4597805/93‑1 (MQ=255)
gcagcaGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGgaga > 1:1399643/1‑93 (MQ=255)
gcagcaGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGgaga < 2:2265956/93‑1 (MQ=255)
cagcagGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGaa < 1:3919985/93‑1 (MQ=255)
gcagGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGc < 2:5597423/93‑1 (MQ=255)
ggTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGcaca > 1:5617137/1‑93 (MQ=255)
ggTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGcaca < 2:4249245/93‑1 (MQ=255)
ggTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGcaca < 1:2817780/93‑1 (MQ=255)
ggTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGcaca > 1:423694/1‑93 (MQ=255)
ggTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGcaca > 1:2177483/1‑93 (MQ=255)
ggTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGAACACGGCTGGAGGAGcaca > 2:2196462/1‑93 (MQ=255)
gTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAg < 1:4527134/93‑1 (MQ=255)
ttGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGa < 1:4014807/93‑1 (MQ=255)
gACGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAat < 2:6183727/93‑1 (MQ=255)
aCGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAata < 2:3015948/93‑1 (MQ=255)
cGATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAatat < 1:5391436/93‑1 (MQ=255)
gATCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATg > 1:1550258/1‑93 (MQ=255)
aTCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATgg < 2:5177512/93‑1 (MQ=255)
aTCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATgg < 2:5233489/93‑1 (MQ=255)
aTCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATgg > 1:6036986/1‑93 (MQ=255)
tCGGACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGt < 2:5414446/93‑1 (MQ=255)
ggACGACCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCg > 1:3297154/1‑93 (MQ=255)
gacCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAg < 2:4072834/93‑1 (MQ=255)
acagcgcgcgcCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAgt > 2:537969/4‑93 (MQ=255)
acCGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAgt > 2:5004870/1‑93 (MQ=255)
ccGCGCGCGCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAgtg < 2:5169010/93‑1 (MQ=255)
cgcgcgcgCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAgtgt < 1:102408/93‑1 (MQ=255)
cgcgcgcgCCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAgtgt < 1:4808395/93‑1 (MQ=255)
gcgcgcgcCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGtt < 1:1265330/93‑1 (MQ=255)
gcgcCACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGcc < 2:3294353/93‑1 (MQ=255)
ccACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGccacc > 1:4930600/1‑93 (MQ=255)
ccACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGccacc < 1:187973/93‑1 (MQ=255)
ccACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGccaca > 1:2860917/1‑92 (MQ=255)
cACGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGccacca < 1:5665279/93‑1 (MQ=255)
aCGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACcag > 1:1707499/1‑93 (MQ=255)
cGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACcagc < 2:2089339/93‑1 (MQ=255)
cGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACcagc < 2:5828135/93‑1 (MQ=255)
cGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACcagc > 2:1046253/1‑93 (MQ=255)
cGAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACcagc > 2:4807453/1‑93 (MQ=255)
gAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACcagca > 1:3770165/1‑93 (MQ=255)
gAGTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGGGAGTGTTCGCCACcagca > 2:1275715/1‑93 (MQ=255)
gTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAgt > 1:5087530/1‑93 (MQ=255)
gTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAgt < 2:2727036/93‑1 (MQ=255)
gTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAgt > 2:854018/1‑93 (MQ=255)
gTGGCCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAgt > 2:4644124/1‑93 (MQ=255)
|
CTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCTTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTC > NC_000913/2335524‑2335702
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAACTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CTTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG > NC_000913/2335521‑2335707
|
AAACTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CC > SRR4302533.2963150/1‑94 (MQ=60)
AACTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGGGG‑CCT > SRR4302533.2467540/1‑94 (MQ=60)
ACTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTC < SRR4302533.6063646/94‑1 (MQ=60)
CTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGGCCTTC > SRR4302533.348098/1‑94 (MQ=60)
CTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCC < SRR4302533.1772975/94‑1 (MQ=60)
CTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCC < SRR4302533.3682839/94‑1 (MQ=60)
GGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGGGCCACGAGTGG‑GCTCCGGC > SRR4302533.447715/1‑94 (MQ=60)
GGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGC > SRR4302533.4733545/1‑94 (MQ=60)
GGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGC > SRR4302533.1494011/1‑94 (MQ=60)
GGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGC > SRR4302533.169191/1‑94 (MQ=60)
CACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAAC < SRR4302533.1150520/94‑1 (MQ=60)
CACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGCGG‑CCTCCGGCAAC > SRR4302533.1759735/1‑94 (MQ=60)
ACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑GCTCCGGCAACT > SRR4302533.5929426/1‑94 (MQ=60)
ACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACT < SRR4302533.3742708/94‑1 (MQ=60)
ACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACT > SRR4302533.3832222/1‑94 (MQ=60)
GCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATA < SRR4302533.4651721/94‑1 (MQ=60)
CAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAA > SRR4302533.2508299/1‑94 (MQ=60)
CAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAA < SRR4302533.5279139/94‑1 (MQ=60)
CAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAA > SRR4302533.5772100/1‑94 (MQ=60)
AGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGAACGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAA > SRR4302533.3514526/1‑94 (MQ=60)
GGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAAC > SRR4302533.779944/1‑94 (MQ=60)
GGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGGGG‑CCTCCGGCCACTGATAAAC > SRR4302533.3451619/1‑94 (MQ=60)
GATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACT < SRR4302533.4138384/94‑1 (MQ=60)
GATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACT > SRR4302533.4161899/1‑94 (MQ=60)
ATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTT > SRR4302533.3643027/1‑94 (MQ=60)
TCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTT > SRR4302533.6267090/1‑94 (MQ=60)
GCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCA < SRR4302533.6048145/94‑1 (MQ=60)
CAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCAT < SRR4302533.4481718/94‑1 (MQ=60)
CAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCAT > SRR4302533.4219541/1‑94 (MQ=60)
AGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATC > SRR4302533.3753604/1‑94 (MQ=60)
AGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATC > SRR4302533.3467364/1‑94 (MQ=60)
AGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATC > SRR4302533.413416/1‑94 (MQ=60)
AGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATC > SRR4302533.4390932/1‑94 (MQ=60)
GTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCG > SRR4302533.5260621/1‑94 (MQ=60)
TGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGA > SRR4302533.3927675/1‑94 (MQ=60)
TGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGA < SRR4302533.1524364/94‑1 (MQ=60)
TGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACCAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGA > SRR4302533.2414967/1‑94 (MQ=60)
GATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAA > SRR4302533.2755645/1‑94 (MQ=60)
ATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAAT < SRR4302533.3914566/94‑1 (MQ=60)
TACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGCCCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATA > SRR4302533.4460630/1‑94 (MQ=60)
TACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATA < SRR4302533.769452/94‑1 (MQ=60)
ACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAG > SRR4302533.2664121/1‑94 (MQ=60)
ACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAG < SRR4302533.4408012/94‑1 (MQ=60)
CGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGA < SRR4302533.1947803/94‑1 (MQ=60)
CGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGA < SRR4302533.5760667/94‑1 (MQ=60)
GTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGAC < SRR4302533.2980495/94‑1 (MQ=60)
GTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGAC < SRR4302533.2990158/94‑1 (MQ=60)
TCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGC < SRR4302533.2347688/94‑1 (MQ=60)
CGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCG > SRR4302533.5169709/1‑94 (MQ=60)
CGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCG > SRR4302533.1272678/1‑94 (MQ=60)
CGTCCTGCCCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCG < SRR4302533.643105/94‑1 (MQ=60)
TCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGAC > SRR4302533.4969160/1‑94 (MQ=60)
TCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGAC < SRR4302533.2633749/94‑1 (MQ=60)
TCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGC‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGAC < SRR4302533.3997425/94‑1 (MQ=60)
CCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCACGCGCCACGAGTGG‑CCTACGGCAACTGATAAACTTTCATCGAATAGAAGCGCCC > SRR4302533.4600493/1‑94 (MQ=60)
CTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCA > SRR4302533.3272068/1‑94 (MQ=60)
CTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCA > SRR4302533.5539343/1‑94 (MQ=60)
CTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGACACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCA > SRR4302533.4471255/1‑94 (MQ=60)
TGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCAC > SRR4302533.2856761/1‑94 (MQ=60)
TGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCAC < SRR4302533.1211975/94‑1 (MQ=60)
TGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCAC > SRR4302533.3931595/1‑94 (MQ=60)
GCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACG < SRR4302533.1982091/94‑1 (MQ=60)
GCTCAAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGT‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACG < SRR4302533.792097/94‑1 (MQ=60)
CTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGG < SRR4302533.874274/94‑1 (MQ=60)
TCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGC < SRR4302533.2727227/94‑1 (MQ=60)
TCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGC > SRR4302533.3436412/1‑94 (MQ=60)
CCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCT < SRR4302533.2895712/94‑1 (MQ=60)
CCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCT < SRR4302533.1755331/94‑1 (MQ=60)
AGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGG < SRR4302533.1966510/94‑1 (MQ=60)
AGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGG > SRR4302533.175221/1‑94 (MQ=60)
GCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGA < SRR4302533.3574691/94‑1 (MQ=60)
CGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAG < SRR4302533.4625658/94‑1 (MQ=60)
CGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAG < SRR4302533.3867650/94‑1 (MQ=60)
GGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGA > SRR4302533.1408079/1‑94 (MQ=60)
GGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGACACCACGGCTGGAGA > SRR4302533.4912152/1‑94 (MQ=60)
CAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAG < SRR4302533.3943924/94‑1 (MQ=60)
CAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAG < SRR4302533.311745/94‑1 (MQ=60)
CAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAG > SRR4302533.1488738/1‑94 (MQ=60)
AGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACA > SRR4302533.2190903/1‑94 (MQ=60)
AGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACA > SRR4302533.426229/1‑94 (MQ=60)
AGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACA > SRR4302533.5651092/1‑94 (MQ=60)
AGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACA > SRR4302533.6061418/1‑94 (MQ=60)
GGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAG < SRR4302533.2835122/94‑1 (MQ=60)
GGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAG < SRR4302533.2683492/94‑1 (MQ=60)
GTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGA < SRR4302533.4554546/94‑1 (MQ=60)
GTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGA > SRR4302533.2883856/1‑94 (MQ=60)
TTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAA < SRR4302533.4039256/94‑1 (MQ=60)
GACGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATA < SRR4302533.841986/94‑1 (MQ=60)
CGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATG < SRR4302533.5423830/94‑1 (MQ=60)
CGATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATG > SRR4302533.1559600/1‑94 (MQ=60)
GATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGG > SRR4302533.4946232/1‑94 (MQ=60)
GATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGG > SRR4302533.6073568/1‑94 (MQ=60)
GATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACCGCTGGAGgagcagagacaatgg > SRR4302533.285120/1‑79 (MQ=60)
CATCGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAACCTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGG < SRR4302533.450914/94‑1 (MQ=60)
CGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCG > SRR4302533.3317502/1‑94 (MQ=60)
CGGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCG < SRR4302533.4107388/94‑1 (MQ=60)
GGACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGT < SRR4302533.4423034/94‑1 (MQ=60)
GACGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTG > SRR4302533.4584405/1‑94 (MQ=60)
CGACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAG < SRR4302533.2533302/94‑1 (MQ=60)
GACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGT < SRR4302533.2755522/94‑1 (MQ=60)
GACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGT < SRR4302533.2787458/94‑1 (MQ=60)
ACCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTG > SRR4302533.5376102/1‑94 (MQ=60)
CCGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGT < SRR4302533.4620449/94‑1 (MQ=60)
CGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTT < SRR4302533.4837506/94‑1 (MQ=60)
CGCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTT < SRR4302533.103046/94‑1 (MQ=60)
GCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTC < SRR4302533.1272900/94‑1 (MQ=60)
GCGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTC > SRR4302533.3809317/1‑94 (MQ=60)
CGCGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCG < SRR4302533.1918586/94‑1 (MQ=60)
CGCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCC > SRR4302533.934543/1‑94 (MQ=60)
GCGCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCA < SRR4302533.2274710/94‑1 (MQ=60)
GCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACC > SRR4302533.4960458/1‑94 (MQ=60)
GCCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACA > SRR4302533.2878517/1‑94 (MQ=60)
CCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCA < SRR4302533.1534815/94‑1 (MQ=60)
CCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCA < SRR4302533.189141/94‑1 (MQ=60)
CCACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCA < SRR4302533.881863/94‑1 (MQ=60)
CACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAG < SRR4302533.5699507/94‑1 (MQ=60)
CACGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAG > SRR4302533.1717847/1‑94 (MQ=60)
ACGAGTGC‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGC < SRR4302533.5727145/94‑1 (MQ=60)
CGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCA > SRR4302533.3793278/1‑94 (MQ=60)
CGAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCA < SRR4302533.1385093/94‑1 (MQ=60)
GAGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAG > SRR4302533.362303/1‑94 (MQ=60)
AGTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGT > SRR4302533.5118270/1‑94 (MQ=60)
GTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTC < SRR4302533.5663893/94‑1 (MQ=60)
GTGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTC < SRR4302533.4080623/94‑1 (MQ=60)
TGG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCG < SRR4302533.428125/94‑1 (MQ=60)
GG‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGG > SRR4302533.1184660/1‑94 (MQ=60)
G‑CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGT > SRR4302533.4025802/1‑94 (MQ=60)
CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTC > SRR4302533.3616119/1‑94 (MQ=60)
CCTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTC < SRR4302533.3482333/94‑1 (MQ=60)
CTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG < SRR4302533.6256142/94‑1 (MQ=60)
CTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG > SRR4302533.4419158/1‑94 (MQ=60)
CTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG < SRR4302533.5763552/94‑1 (MQ=60)
CTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG > SRR4302533.865823/1‑94 (MQ=60)
CTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG > SRR4302533.2137878/1‑94 (MQ=60)
CTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG < SRR4302533.5201332/94‑1 (MQ=60)
CTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG > SRR4302533.2237950/1‑94 (MQ=60)
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AAACTCGGTCACTGGCAGGATCGCAGTGATACGTTCGTCCTGCTCCAGCGGCAGCAGGTTGACGATCGGACGACCGCGCGCGCCACGAGTGG‑CTTCCGGCAACTGATAAACTTTCATCGAATAGACGCGACCACGGCTGGAGAAGCACAGAATATGGTCGTGAGTGTTCGCCACCAGCAGTCGGTCG > NC_000913/2335521‑2335707
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
