Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,515,312 |
T→C |
M181V (ATG→GTG) |
b2395 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,515,312 | 0 | T | C | 100.0%
| 658.8
/ NA
| 202 | M181V (ATG→GTG) | b2395 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/95); total (107/95) |
Only 100 of 217 total aligned reads displayed.
CTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCATGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTA > NC_000913/2515222‑2515401
|
ctTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAcgt > 1:3715130/1‑93 (MQ=255)
ctTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAcgt > 2:1344238/1‑93 (MQ=255)
tttGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAcgtt > 2:1458828/1‑93 (MQ=255)
tttGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAcgtt > 1:1463367/1‑93 (MQ=255)
gCCCCACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTa < 2:6304377/93‑1 (MQ=255)
gCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTa > 1:6165315/1‑93 (MQ=255)
ccAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTaaa > 1:1972652/1‑93 (MQ=255)
cAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAAt > 2:4561688/1‑93 (MQ=255)
aaCGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATc < 2:1757810/93‑1 (MQ=255)
aaCGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATc < 2:296277/93‑1 (MQ=255)
aaCGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATc < 1:2595172/93‑1 (MQ=255)
aaCGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATc > 2:1046019/1‑93 (MQ=255)
acgacgGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGGGAGATAGTAGAAAAGCACGTTGTAAATCa > 2:3175823/1‑93 (MQ=255)
ggAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGcaca < 2:4776215/93‑1 (MQ=255)
ggAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGcaca < 1:4084847/93‑1 (MQ=255)
gAGCGATATCCCTGCGCCATAATATATGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCACCACAg > 1:1859585/1‑93 (MQ=255)
gAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAg < 1:5892856/93‑1 (MQ=255)
aGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGc < 1:6001696/93‑1 (MQ=255)
aGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGc < 1:5402656/93‑1 (MQ=255)
aGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGc < 2:3305522/93‑1 (MQ=255)
aGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGc < 2:758880/93‑1 (MQ=255)
gCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCg < 1:3100574/93‑1 (MQ=255)
cGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCgg > 1:4391225/1‑93 (MQ=255)
cGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCgg < 1:681584/93‑1 (MQ=255)
gATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGt > 2:2395807/1‑93 (MQ=255)
gATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGt < 1:2308223/93‑1 (MQ=255)
atatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTg > 1:5227918/1‑93 (MQ=255)
atatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTg > 2:3822781/1‑93 (MQ=255)
atatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTg > 1:6287941/1‑93 (MQ=255)
tatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGa > 2:497203/1‑93 (MQ=255)
tatCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGa > 1:4637416/1‑93 (MQ=255)
tCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaa < 1:741178/93‑1 (MQ=255)
tCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaa > 2:846708/1‑93 (MQ=255)
tCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaa < 1:5162045/93‑1 (MQ=255)
cccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaaa < 1:5675553/93‑1 (MQ=255)
cccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaaa < 2:6228286/93‑1 (MQ=255)
cccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaaa < 1:1372605/93‑1 (MQ=255)
ccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAg > 2:151813/1‑93 (MQ=255)
ccTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAg > 1:2540077/1‑93 (MQ=255)
cTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGaaaatg > 2:5383140/1‑91 (MQ=255)
cTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAgg > 2:1313504/1‑93 (MQ=255)
cTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAgg > 2:3243007/1‑93 (MQ=255)
gcgcCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCt < 1:3651423/93‑1 (MQ=255)
cgcCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCtt < 2:1211835/93‑1 (MQ=255)
cgcCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCtt < 2:206648/93‑1 (MQ=255)
cgcCACAATATCGGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGGAGAAAATCACGTTGTAAATCAGCACAGCGGTGAAAAGGCtt < 2:2156300/93‑1 (MQ=255)
gcCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTa < 1:349886/93‑1 (MQ=255)
ccACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAg < 1:5657164/93‑1 (MQ=255)
cacaATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGc > 2:4127820/1‑93 (MQ=255)
acaATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCa > 1:1099279/1‑93 (MQ=255)
acaATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCa > 1:3345132/1‑93 (MQ=255)
caATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCaa > 2:4303658/1‑93 (MQ=255)
aaTATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCaaa > 1:1262098/1‑93 (MQ=255)
atatCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAAt > 1:3908147/1‑93 (MQ=255)
tatCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATc < 2:336432/93‑1 (MQ=255)
tCTGCTCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCaa > 2:5693073/1‑93 (MQ=255)
cTGGGCGAAGGGGGGAGTTACAATCATGCGGGTGAAATATTAGAAAAGCACGTTTAAAATCAGAACAGCGGTGAAAAGCCTTAGCAAATCAAc < 2:4029296/93‑1 (MQ=255)
gcgcAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGa > 1:414169/1‑93 (MQ=255)
cgcAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGAc < 2:1547571/93‑1 (MQ=255)
gcAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGAcc > 2:5258309/1‑93 (MQ=255)
aaaGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGt > 1:6038230/1‑93 (MQ=255)
aaGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTg > 2:2552747/1‑93 (MQ=255)
ggggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGaaaa < 2:1248411/93‑1 (MQ=255)
ggggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGaaaa < 1:2533408/93‑1 (MQ=255)
gggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAAt > 1:4327344/1‑93 (MQ=255)
ggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATg < 2:925405/93‑1 (MQ=255)
ggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATg < 1:2273214/93‑1 (MQ=255)
ggACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATg < 1:4957075/93‑1 (MQ=255)
gACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATgg > 2:595029/1‑93 (MQ=255)
gACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATgg < 1:57100/93‑1 (MQ=255)
gACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATgg > 1:2031049/1‑93 (MQ=255)
aCTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGc < 2:1471454/93‑1 (MQ=255)
cTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCa > 2:3933439/1‑93 (MQ=255)
tACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATc < 1:2442405/93‑1 (MQ=255)
aCAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATcc > 1:866731/1‑93 (MQ=255)
aCAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATcc < 2:4860333/93‑1 (MQ=255)
aCAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATcc > 1:3746986/1‑93 (MQ=255)
cAATCATGCGAGTGAGATAGCAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCg > 1:924097/1‑93 (MQ=255)
aaTCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGc > 2:1587634/1‑93 (MQ=255)
aaTCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGc < 1:1756204/93‑1 (MQ=255)
aTCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCa < 1:1547085/93‑1 (MQ=255)
aTCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCa < 2:4696181/93‑1 (MQ=255)
tCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCAt < 2:1981614/93‑1 (MQ=255)
aTGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCg > 2:1107158/1‑93 (MQ=255)
tGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGc > 1:2089774/1‑93 (MQ=255)
tGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGc > 2:606059/1‑93 (MQ=255)
tGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGaaaa < 2:5605671/93‑1 (MQ=255)
gagaTAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGaaaaa < 1:5859310/93‑1 (MQ=255)
agaTAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAg < 1:2969359/93‑1 (MQ=255)
tagtagAAAAGCACGTTGTAAATTAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTg < 2:2490270/93‑1 (MQ=255)
tagtagAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTg > 1:4212641/1‑93 (MQ=255)
tagtagAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTg > 1:5524523/1‑93 (MQ=255)
gtagAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGa < 2:3707311/93‑1 (MQ=255)
tagAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGat < 1:3280162/93‑1 (MQ=255)
aaaaGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATc < 1:3162762/93‑1 (MQ=255)
aaaaGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATc > 2:864244/1‑93 (MQ=255)
aaaaGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATc > 1:1247182/1‑93 (MQ=255)
aGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCttt < 1:4503676/93‑1 (MQ=255)
gCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTa < 1:1839195/93‑1 (MQ=255)
gCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGGGGATATCtttg > 2:3479687/1‑92 (MQ=255)
|
CTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCATGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTA > NC_000913/2515222‑2515401
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTCTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCATGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTAGCGG > NC_000913/2515219‑2515405
|
TCTCTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCAC < SRR4302533.4257134/94‑1 (MQ=60)
CTCTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACG > SRR4302533.3659527/1‑94 (MQ=60)
CTCTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACG < SRR4302533.4176932/94‑1 (MQ=60)
CTCTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACG > SRR4302533.2028583/1‑94 (MQ=60)
CTCTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACG > SRR4302533.2594423/1‑94 (MQ=60)
TCTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGT > SRR4302533.3737936/1‑94 (MQ=60)
CTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTT < SRR4302533.4819784/94‑1 (MQ=60)
CTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTT < SRR4302533.6091334/94‑1 (MQ=60)
CTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTT > SRR4302533.1472188/1‑94 (MQ=60)
TTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTG < SRR4302533.5209083/94‑1 (MQ=60)
TTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGT > SRR4302533.1330055/1‑94 (MQ=60)
TGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTA > SRR4302533.6202376/1‑94 (MQ=60)
GCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAA < SRR4302533.251183/94‑1 (MQ=60)
CCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAA > SRR4302533.1984726/1‑94 (MQ=60)
CCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAAT > SRR4302533.3520038/1‑94 (MQ=60)
CCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAAT < SRR4302533.5086661/94‑1 (MQ=60)
CAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATC < SRR4302533.3126399/94‑1 (MQ=60)
AACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCA < SRR4302533.2611122/94‑1 (MQ=60)
GACGGAGCGATATCCCTGCGCCACAATAGCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCA < SRR4302533.2549946/94‑1 (MQ=60)
CGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACA > SRR4302533.3918001/1‑94 (MQ=60)
CGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACA > SRR4302533.2305529/1‑94 (MQ=60)
CGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACA > SRR4302533.5734380/1‑94 (MQ=60)
GGAGCGATATCCCTGCGCCATAATATATGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCACCACAG > SRR4302533.1870928/1‑94 (MQ=60)
GGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAG < SRR4302533.4109714/94‑1 (MQ=60)
GAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGC < SRR4302533.4142327/94‑1 (MQ=60)
GAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGC < SRR4302533.5928450/94‑1 (MQ=60)
AGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCG < SRR4302533.6038054/94‑1 (MQ=60)
AGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCG < SRR4302533.5435120/94‑1 (MQ=60)
GCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGG < SRR4302533.3119634/94‑1 (MQ=60)
GCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGG > SRR4302533.4417734/1‑94 (MQ=60)
CGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTCAATCAGCACAGCGGG > SRR4302533.2777570/1‑94 (MQ=60)
CGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGT < SRR4302533.685614/94‑1 (MQ=60)
GATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTG < SRR4302533.2322520/94‑1 (MQ=60)
GATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTG > SRR4302533.6325452/1‑94 (MQ=60)
GATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTG < SRR4302533.4053319/94‑1 (MQ=60)
GATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTG > SRR4302533.5259371/1‑94 (MQ=60)
ATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGA > SRR4302533.4665516/1‑94 (MQ=60)
ATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGA < SRR4302533.1263920/94‑1 (MQ=60)
TCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAA < SRR4302533.5193208/94‑1 (MQ=60)
TCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAA < SRR4302533.745540/94‑1 (MQ=60)
TCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCAGGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAA > SRR4302533.4470300/1‑94 (MQ=60)
CCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAG < SRR4302533.5709831/94‑1 (MQ=60)
CCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAG < SRR4302533.1380862/94‑1 (MQ=60)
CCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAG > SRR4302533.2555714/1‑94 (MQ=60)
CCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAG < SRR4302533.1853909/94‑1 (MQ=60)
CCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAG < SRR4302533.6066921/94‑1 (MQ=60)
CCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAG > SRR4302533.637417/1‑94 (MQ=60)
CTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGC > SRR4302533.3764225/1‑94 (MQ=60)
TGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCT > SRR4302533.5706567/1‑94 (MQ=60)
GCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTT < SRR4302533.3673872/94‑1 (MQ=60)
GCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTT < SRR4302533.1934652/94‑1 (MQ=60)
GCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAG < SRR4302533.352018/94‑1 (MQ=60)
GCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAG < SRR4302533.2393967/94‑1 (MQ=60)
CCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGC < SRR4302533.5691349/94‑1 (MQ=60)
CCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGC > SRR4302533.2211989/1‑94 (MQ=60)
CCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGC < SRR4302533.420320/94‑1 (MQ=60)
CACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCA > SRR4302533.3365800/1‑94 (MQ=60)
CACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCA > SRR4302533.1105794/1‑94 (MQ=60)
CAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAA > SRR4302533.1269646/1‑94 (MQ=60)
CAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAA > SRR4302533.6278614/1‑94 (MQ=60)
AATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAAT < SRR4302533.852813/94‑1 (MQ=60)
AATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAAT > SRR4302533.3932016/1‑94 (MQ=60)
AATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAAT < SRR4302533.3573474/94‑1 (MQ=60)
TCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAAC < SRR4302533.2148392/94‑1 (MQ=60)
CTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACG < SRR4302533.1573511/94‑1 (MQ=60)
TGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGA > SRR4302533.416655/1‑94 (MQ=60)
TGCGCAAAGTGGGGACTTACAATCATGCGAGAGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGA > SRR4302533.5373227/1‑94 (MQ=60)
CAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGT > SRR4302533.6074820/1‑94 (MQ=60)
AAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTG > SRR4302533.4283923/1‑94 (MQ=60)
GTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAA > SRR4302533.1473755/1‑94 (MQ=60)
GTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAA > SRR4302533.17542/1‑94 (MQ=60)
GGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAAT > SRR4302533.4353411/1‑94 (MQ=60)
GGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAAT < SRR4302533.2549003/94‑1 (MQ=60)
GGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGG < SRR4302533.2287284/94‑1 (MQ=60)
GGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGG > SRR4302533.2043582/1‑94 (MQ=60)
GGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGG < SRR4302533.4987102/94‑1 (MQ=60)
GACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGC < SRR4302533.57481/94‑1 (MQ=60)
GACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGC > SRR4302533.5834284/1‑94 (MQ=60)
ACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCA > SRR4302533.4416104/1‑94 (MQ=60)
ACTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCA < SRR4302533.3337156/94‑1 (MQ=60)
CTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCAT < SRR4302533.418680/94‑1 (MQ=60)
CTTACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCAT > SRR4302533.4550487/1‑94 (MQ=60)
TACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCC > SRR4302533.3769958/1‑94 (MQ=60)
TACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCC < SRR4302533.2457483/94‑1 (MQ=60)
TACAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCC > SRR4302533.871810/1‑94 (MQ=60)
ACAATCATGCGAGTGAGATAGCAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCG > SRR4302533.929524/1‑94 (MQ=60)
CAATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGC > SRR4302533.876912/1‑94 (MQ=60)
AATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCA < SRR4302533.1766903/94‑1 (MQ=60)
AATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCA > SRR4302533.2024471/1‑94 (MQ=60)
AATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCA > SRR4302533.2892526/1‑94 (MQ=60)
AATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCA > SRR4302533.5895987/1‑94 (MQ=60)
AATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCA > SRR4302533.5670108/1‑94 (MQ=60)
ATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCAT < SRR4302533.1556408/94‑1 (MQ=60)
ATCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCAT < SRR4302533.3009520/94‑1 (MQ=60)
TCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATC > SRR4302533.3683214/1‑94 (MQ=60)
TCATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATC < SRR4302533.5449886/94‑1 (MQ=60)
CATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCG > SRR4302533.1163701/1‑94 (MQ=60)
ATGCGAGTGAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGC > SRR4302533.2102641/1‑94 (MQ=60)
GAGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAG < SRR4302533.5894732/94‑1 (MQ=60)
AGATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGG < SRR4302533.2987514/94‑1 (MQ=60)
ATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTG > SRR4302533.4238124/1‑94 (MQ=60)
ATAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTG > SRR4302533.5557875/1‑94 (MQ=60)
TAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGG > SRR4302533.1441816/1‑94 (MQ=60)
TAGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGG < SRR4302533.3250779/94‑1 (MQ=60)
AGTAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGA > SRR4302533.981240/1‑94 (MQ=60)
TAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATA < SRR4302533.3300413/94‑1 (MQ=60)
TAGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATA > SRR4302533.694440/1‑94 (MQ=60)
AGAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATAT > SRR4302533.5976211/1‑94 (MQ=60)
GAAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATC > SRR4302533.1254630/1‑94 (MQ=60)
AAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCT > SRR4302533.572138/1‑94 (MQ=60)
AAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCT > SRR4302533.5099303/1‑94 (MQ=60)
AAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCT > SRR4302533.3526127/1‑94 (MQ=60)
AAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCT < SRR4302533.3182231/94‑1 (MQ=60)
AAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCT < SRR4302533.2054041/94‑1 (MQ=60)
AAAAGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCCTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCT > SRR4302533.1847794/1‑94 (MQ=60)
AGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTA < SRR4302533.4530959/94‑1 (MQ=60)
AGCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTA < SRR4302533.6232076/94‑1 (MQ=60)
GCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTAG < SRR4302533.2564399/94‑1 (MQ=60)
GCACGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTAG < SRR4302533.1850411/94‑1 (MQ=60)
CGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTAGCGG < SRR4302533.3769199/94‑1 (MQ=60)
CGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTAGCGG < SRR4302533.141788/94‑1 (MQ=60)
|
TCTCTTTGCCCAACGACGGAGCGATATCCCTGCGCCACAATATCTGCGCAAAGTGGGGACTTACAATCATGCGAGTGAGATAGTAGAAAAGCATGTTGTAAATCAGCACAGCGGTGAAAAGGCTTAGCAAATCAACGACCGTGAAAATGGCATCCGCATCGCCGAAAAAGGTGGATATCTTTAGCGG > NC_000913/2515219‑2515405
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
