Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,674,176 |
T→C |
I224V (ATT→GTT) |
yphD ← |
putative transport system permease protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,674,176 | 0 | T | C | 100.0%
| 538.3
/ NA
| 168 | I224V (ATT→GTT) | yphD | putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (87/81); total (87/81) |
Only 100 of 176 total aligned reads displayed.
TTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAATGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGC > NC_000913/2674086‑2674265
|
ttGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACgc < 1:1754706/93‑1 (MQ=255)
ttGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACgc < 1:4512952/93‑1 (MQ=255)
cgccACCTGCGTTACCAGAACCGAGGCGCGCCACCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCa < 2:665137/90‑1 (MQ=255)
gCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAcc > 1:5914459/1‑93 (MQ=255)
cACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAccc < 1:4820943/93‑1 (MQ=255)
cACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAccc < 1:4151966/93‑1 (MQ=255)
ccTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcga < 2:1340787/93‑1 (MQ=255)
ccTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcga > 2:763944/1‑93 (MQ=255)
cTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcgac < 1:5712844/93‑1 (MQ=255)
cTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcgac > 1:4318421/1‑93 (MQ=255)
gCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCcgacga > 1:1376965/1‑93 (MQ=255)
cGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGaa < 2:4295804/93‑1 (MQ=255)
ttACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACg > 1:4818273/1‑93 (MQ=255)
ttACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACg > 2:929768/1‑93 (MQ=255)
ttACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACg > 2:4202125/1‑93 (MQ=255)
cAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGa < 2:3363494/93‑1 (MQ=255)
cAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGa < 1:5129730/93‑1 (MQ=255)
cAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGa < 2:119158/93‑1 (MQ=255)
aGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAACCGACGAACGTTGAt > 1:713335/1‑93 (MQ=255)
gAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATg > 1:3899291/1‑93 (MQ=255)
cGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGc > 2:5865367/1‑93 (MQ=255)
aGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGcac > 2:4573006/1‑93 (MQ=255)
aGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGcaa > 2:373365/1‑92 (MQ=255)
cgcgcCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAAc < 1:6291601/93‑1 (MQ=255)
cgcgcCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAAc < 1:5409945/93‑1 (MQ=255)
cgccgcCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTg > 1:2601316/1‑93 (MQ=255)
gccgccAACAAAATGCCGGTCCCCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTgc < 2:602549/93‑1 (MQ=255)
ccgccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTgcg > 2:2840639/1‑93 (MQ=255)
ccgccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTgcc > 1:5974216/1‑92 (MQ=255)
cgccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTgcgc > 1:1244350/1‑93 (MQ=255)
cgccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGAGCACCCGACGAACGTTGATGCCGCACAACTgcgc > 2:2166677/1‑93 (MQ=255)
gccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGcgcc > 1:67969/1‑93 (MQ=255)
gccAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGcgcc > 1:2513473/1‑93 (MQ=255)
aacaaAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCgccgcc > 1:5496076/1‑93 (MQ=255)
acaaAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGccgccg > 2:6166655/1‑93 (MQ=255)
aaaTGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAg > 2:1122781/1‑93 (MQ=255)
aaTGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGc > 1:5417613/1‑93 (MQ=255)
aTGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCa < 2:2821939/93‑1 (MQ=255)
gCCGGCCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCAtt < 2:3332002/93‑1 (MQ=255)
ccGGTCACCGCCGATAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTa < 2:2553033/93‑1 (MQ=255)
cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc < 1:4757476/93‑1 (MQ=255)
cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc < 2:375199/93‑1 (MQ=255)
cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc < 2:5260859/93‑1 (MQ=255)
cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc < 1:1765211/93‑1 (MQ=255)
cGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc > 1:141348/1‑93 (MQ=255)
cGGTCACCGCCCCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAc < 2:1980999/93‑1 (MQ=255)
ggTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAcc > 1:1437589/1‑93 (MQ=255)
gTCCCCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCg < 2:3567716/93‑1 (MQ=255)
cACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGcc > 2:1433166/1‑93 (MQ=255)
cACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGcc > 2:58975/1‑93 (MQ=255)
aCCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCa > 2:4457129/1‑93 (MQ=255)
aCCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCa > 1:1029659/1‑93 (MQ=255)
ccgccgCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCaa > 2:3468495/1‑93 (MQ=255)
ccgccgCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCaa < 2:3165726/93‑1 (MQ=255)
ccgccgCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCaa > 1:4276717/1‑93 (MQ=255)
gccgcTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACg > 2:2579448/1‑93 (MQ=255)
gcTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCa > 2:5354900/1‑93 (MQ=255)
gcTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCa > 2:4720836/1‑93 (MQ=255)
cTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaa < 1:1021513/93‑1 (MQ=255)
taataaTCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaa > 1:1685468/1‑93 (MQ=255)
aataatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaaa > 1:928466/1‑93 (MQ=255)
aataatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaaa > 1:3126661/1‑93 (MQ=255)
ataatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaaaa < 1:6255623/93‑1 (MQ=255)
ataatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCaaaaa < 1:3021728/93‑1 (MQ=255)
taatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAAc < 2:3642309/93‑1 (MQ=255)
aatCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAAcc > 1:778305/1‑93 (MQ=255)
aatCCCGAAAGGGTAAAAATAAGAACGCGCACCCGACGAACGTTGATCCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAAcc < 2:4031551/93‑1 (MQ=255)
atCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCg > 2:4374776/1‑93 (MQ=255)
tCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGa > 1:760086/1‑93 (MQ=255)
cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg < 1:2132802/93‑1 (MQ=255)
cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg < 2:4903867/93‑1 (MQ=255)
cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg < 2:5128151/93‑1 (MQ=255)
cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg < 1:2343474/93‑1 (MQ=255)
cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg > 1:330037/1‑93 (MQ=255)
cccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAg > 1:1535289/1‑93 (MQ=255)
ccGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAgc > 2:2460182/1‑93 (MQ=255)
ccGAAAGGATAAAGATAAGACCGCGCACCAGACGAACGTTGATTCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAgc < 2:6196105/93‑1 (MQ=255)
aaaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGcc > 1:3829914/1‑93 (MQ=255)
aaaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGcc < 2:5021623/93‑1 (MQ=255)
aaaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGcc > 1:4428520/1‑93 (MQ=255)
aaaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATCCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGcc < 1:3990056/93‑1 (MQ=255)
aaGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGccc < 1:2255662/93‑1 (MQ=255)
gggTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGa > 2:2773930/1‑93 (MQ=255)
gggTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGa > 2:811636/1‑93 (MQ=255)
gggTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGa > 1:3567046/1‑93 (MQ=255)
ggTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGaa > 1:6223630/1‑93 (MQ=255)
tAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAgg < 1:3472695/93‑1 (MQ=255)
aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc < 2:4738411/93‑1 (MQ=255)
aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc < 1:2494026/93‑1 (MQ=255)
aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc > 2:1805875/1‑93 (MQ=255)
aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc < 2:5637386/93‑1 (MQ=255)
aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc < 1:3324837/93‑1 (MQ=255)
aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc < 1:2026716/93‑1 (MQ=255)
aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc < 1:4842999/93‑1 (MQ=255)
aaaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGc > 2:2735743/1‑93 (MQ=255)
aaGATAAGACCGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCg < 1:2350365/93‑1 (MQ=255)
aaGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCg > 2:2897906/1‑93 (MQ=255)
aGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCgg > 2:2360657/1‑93 (MQ=255)
gAACGCGCCCCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGc < 2:1711475/93‑1 (MQ=255)
gAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGc < 1:6194747/93‑1 (MQ=255)
|
TTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAATGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGC > NC_000913/2674086‑2674265
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAATGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGCGGCT > NC_000913/2674083‑2674269
|
CGTTTGCGGCCCCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAAC < SRR4302533.4899077/94‑1 (MQ=60)
CGTTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAAC < SRR4302533.6067211/94‑1 (MQ=60)
CGTTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAAC < SRR4302533.1648385/94‑1 (MQ=60)
GTTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACG > SRR4302533.602021/1‑94 (MQ=60)
GTTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACG < SRR4302533.878804/94‑1 (MQ=60)
GTTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACG > SRR4302533.3158523/1‑94 (MQ=60)
GTTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACG > SRR4302533.5715774/1‑94 (MQ=60)
TTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGC < SRR4302533.2874573/94‑1 (MQ=60)
TTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCG < SRR4302533.4540283/94‑1 (MQ=60)
TTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCG < SRR4302533.1765392/94‑1 (MQ=60)
TGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGC < SRR4302533.4868382/94‑1 (MQ=60)
GCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCA < SRR4302533.5502737/94‑1 (MQ=60)
GGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACC > SRR4302533.5950201/1‑94 (MQ=60)
CACCTGCGTTGCCAGAACCGAGGCGCGCCGCCAGCAAAAGGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCG < SRR4302533.4533063/94‑1 (MQ=60)
CACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCG < SRR4302533.4850155/94‑1 (MQ=60)
CACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCG > SRR4302533.695690/1‑94 (MQ=60)
CACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCG < SRR4302533.4177122/94‑1 (MQ=60)
CCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGAC < SRR4302533.4935070/94‑1 (MQ=60)
CCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGAC > SRR4302533.4344429/1‑94 (MQ=60)
CTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACG < SRR4302533.5747353/94‑1 (MQ=60)
CTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACG > SRR4302533.77879/1‑94 (MQ=60)
CTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACG < SRR4302533.4601025/94‑1 (MQ=60)
TGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGA > SRR4302533.1385249/1‑94 (MQ=60)
GTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACG > SRR4302533.4847477/1‑94 (MQ=60)
CAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGAT < SRR4302533.2153541/94‑1 (MQ=60)
CAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGAT < SRR4302533.5160720/94‑1 (MQ=60)
CAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCAACCGACGAACGTTGAT > SRR4302533.717543/1‑94 (MQ=60)
AGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATG > SRR4302533.3923083/1‑94 (MQ=60)
AGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATG > SRR4302533.2364963/1‑94 (MQ=60)
AGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATG > SRR4302533.3815372/1‑94 (MQ=60)
CGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACT < SRR4302533.5442467/94‑1 (MQ=60)
CGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACT < SRR4302533.6329116/94‑1 (MQ=60)
GCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTG > SRR4302533.2617298/1‑94 (MQ=60)
GCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTG < SRR4302533.733089/94‑1 (MQ=60)
GCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTG < SRR4302533.2053268/94‑1 (MQ=60)
GCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCG < SRR4302533.6258529/94‑1 (MQ=60)
GCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCC > SRR4302533.6010378/1‑94 (MQ=60)
CCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGC > SRR4302533.1251781/1‑94 (MQ=60)
CCGCAAACAAAATGCCGGACACCGCCGTGAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACTAACGTTGATGCCGCACAACTGCGC < SRR4302533.3085616/94‑1 (MQ=60)
CGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCC > SRR4302533.68412/1‑94 (MQ=60)
CGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCC > SRR4302533.1761288/1‑94 (MQ=60)
CGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCC > SRR4302533.1495583/1‑94 (MQ=60)
CGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCC > SRR4302533.2528962/1‑94 (MQ=60)
CCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACccaacacaataacacagagcaacaacac > SRR4302533.3439055/1‑66 (MQ=60)
CAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCC > SRR4302533.5529225/1‑94 (MQ=60)
CAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTA < SRR4302533.5742174/94‑1 (MQ=60)
AAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAG < SRR4302533.2527714/94‑1 (MQ=60)
AAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAG > SRR4302533.1228266/1‑94 (MQ=60)
AAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGC < SRR4302533.3907834/94‑1 (MQ=60)
AAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGC > SRR4302533.5450203/1‑94 (MQ=60)
CCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTAC > SRR4302533.142252/1‑94 (MQ=60)
CGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACC > SRR4302533.1446268/1‑94 (MQ=60)
CGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACC < SRR4302533.4786342/94‑1 (MQ=60)
CGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACC < SRR4302533.1775961/94‑1 (MQ=60)
CACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCA > SRR4302533.3581912/1‑94 (MQ=60)
CACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCA > SRR4302533.1035711/1‑94 (MQ=60)
ACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAA > SRR4302533.6263276/1‑94 (MQ=60)
ACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAA > SRR4302533.4302438/1‑94 (MQ=60)
CCGCGGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGAGGCCGCACACCGGCGCCGCCGTAGCATTACCGCCAAC < SRR4302533.2994107/94‑1 (MQ=60)
CCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAAC < SRR4302533.6120313/94‑1 (MQ=60)
CGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACG < SRR4302533.3489994/94‑1 (MQ=60)
GCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGG < SRR4302533.4148543/94‑1 (MQ=60)
GCCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGG > SRR4302533.4302689/1‑94 (MQ=60)
CCGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGC < SRR4302533.5755712/94‑1 (MQ=60)
CGCTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCA > SRR4302533.1627331/1‑94 (MQ=60)
CTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAA > SRR4302533.1695680/1‑94 (MQ=60)
CTAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAA < SRR4302533.1027515/94‑1 (MQ=60)
TAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAA > SRR4302533.933918/1‑94 (MQ=60)
TAATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAA > SRR4302533.3145881/1‑94 (MQ=60)
ATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAAC < SRR4302533.6293033/94‑1 (MQ=60)
ATAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAAC < SRR4302533.3040217/94‑1 (MQ=60)
TAATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACC > SRR4302533.782885/1‑94 (MQ=60)
AATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCG > SRR4302533.5349621/1‑94 (MQ=60)
ATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGA > SRR4302533.764559/1‑94 (MQ=60)
ATCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGA < SRR4302533.2358943/94‑1 (MQ=60)
TCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAG > SRR4302533.1544515/1‑94 (MQ=60)
TCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAG > SRR4302533.332053/1‑94 (MQ=60)
CCCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAG < SRR4302533.192582/94‑1 (MQ=60)
CCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGC < SRR4302533.1358015/94‑1 (MQ=60)
CCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGC < SRR4302533.2145957/94‑1 (MQ=60)
CCCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGC < SRR4302533.2357979/94‑1 (MQ=60)
CCGAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCG > SRR4302533.4796548/1‑94 (MQ=60)
GAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCC > SRR4302533.4455292/1‑94 (MQ=60)
GAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCC > SRR4302533.1388902/1‑94 (MQ=60)
GAAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCC > SRR4302533.3853327/1‑94 (MQ=60)
AAAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATCCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCC < SRR4302533.4014359/94‑1 (MQ=60)
AAGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCG < SRR4302533.2269615/94‑1 (MQ=60)
AGGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGA > SRR4302533.3589028/1‑94 (MQ=60)
GGGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAA > SRR4302533.6260927/1‑94 (MQ=60)
GGTAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAG < SRR4302533.272958/94‑1 (MQ=60)
TAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGC < SRR4302533.3494125/94‑1 (MQ=60)
TAAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGC > SRR4302533.3209301/1‑94 (MQ=60)
AAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCG < SRR4302533.2509411/94‑1 (MQ=60)
AAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCG < SRR4302533.3345378/94‑1 (MQ=60)
AAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCG < SRR4302533.2039228/94‑1 (MQ=60)
AAAGATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCG < SRR4302533.4872351/94‑1 (MQ=60)
AAGATAAGACCGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGG < SRR4302533.2364906/94‑1 (MQ=60)
ATAAGAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTT < SRR4302533.4226801/94‑1 (MQ=60)
AGAACGCGCACCCGACGAACGTTGAGGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTgtttc > SRR4302533.6344413/1‑89 (MQ=60)
GAACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGCG < SRR4302533.6231916/94‑1 (MQ=60)
AACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGCGG < SRR4302533.3987656/94‑1 (MQ=60)
ACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGCGGC < SRR4302533.5474387/94‑1 (MQ=60)
ACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGCGGC < SRR4302533.571925/94‑1 (MQ=60)
ACGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGACGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTtcggt > SRR4302533.1888966/1‑89 (MQ=60)
CGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGCGGCT < SRR4302533.1624203/94‑1 (MQ=60)
CGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGCGGCT < SRR4302533.2790565/94‑1 (MQ=60)
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CGTTTGCGGCACCTGCGTTACCAGAACCGAGGCGCGCCGCCAACAAAATGCCGGTCACCGCCGCTAATAATCCCGAAAGGGTAAAGATAAGAATGCGCACCCGACGAACGTTGATGCCGCACAACTGCGCCGCCGTAGCATTACCGCCAACGGCAAAAACCGAGCGCCCGAAGGCGGTTTTGCGGCT > NC_000913/2674083‑2674269
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
