Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,794,501 |
A→G |
S103P (TCT→CCT) |
ygaU ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,794,501 | 0 | A | G | 100.0%
| 660.9
/ NA
| 202 | S103P (TCT→CCT) | ygaU | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (111/91); total (111/91) |
Only 100 of 205 total aligned reads displayed.
TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCG > NC_000913/2794411‑2794590
|
ttAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCt < 1:3966647/93‑1 (MQ=255)
gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa < 1:4049461/93‑1 (MQ=255)
gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa < 2:3671359/93‑1 (MQ=255)
gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa < 2:191537/93‑1 (MQ=255)
gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa < 1:6306849/93‑1 (MQ=255)
cATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTATCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAAc < 2:5073753/93‑1 (MQ=255)
aTCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACg > 1:3865095/1‑93 (MQ=255)
aTCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACg < 2:4188296/93‑1 (MQ=255)
aTCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACg > 2:3114239/1‑93 (MQ=255)
tCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACgg > 2:5417466/1‑93 (MQ=255)
tCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACgg > 2:2923141/1‑93 (MQ=255)
ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta > 2:3045933/1‑93 (MQ=255)
ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta > 1:5211248/1‑93 (MQ=255)
ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta > 1:5712813/1‑93 (MQ=255)
tttATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGtata > 1:1910123/1‑93 (MQ=255)
ttATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaa < 2:5956362/93‑1 (MQ=255)
aTTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaaaa > 1:1633346/1‑93 (MQ=255)
tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct < 2:1630515/93‑1 (MQ=255)
tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct < 1:1185621/93‑1 (MQ=255)
tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct < 1:2660477/93‑1 (MQ=255)
gCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActgg > 2:5788474/1‑93 (MQ=255)
gCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActgg < 1:289865/93‑1 (MQ=255)
ttCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggct < 1:4115413/93‑1 (MQ=255)
ttCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGAGTCGCCAGGCTTAACGGTATAAAActggct > 2:6000800/1‑93 (MQ=255)
tCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctg < 2:2182990/93‑1 (MQ=255)
tCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctg > 2:64504/1‑93 (MQ=255)
cGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctgg < 2:5116005/93‑1 (MQ=255)
gAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACtggctggc > 1:1386916/1‑93 (MQ=255)
aGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAg > 1:3108878/1‑93 (MQ=255)
gATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGt < 2:697269/93‑1 (MQ=255)
aTTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTg < 2:3948850/93‑1 (MQ=255)
ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg > 2:3825705/1‑93 (MQ=255)
ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg < 1:5248497/93‑1 (MQ=255)
ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAAAGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg > 1:4437585/1‑93 (MQ=255)
tttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGc > 1:5982632/1‑93 (MQ=255)
ttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCt > 1:3526695/1‑93 (MQ=255)
tATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTg < 2:61821/93‑1 (MQ=255)
aTTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTgg > 1:2428739/1‑93 (MQ=255)
ttGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTggg > 1:4157671/1‑92 (MQ=255)
gTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtgt > 1:2167200/1‑93 (MQ=255)
tACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtgtg > 2:1234849/1‑92 (MQ=255)
aCAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCg > 2:2498699/1‑93 (MQ=255)
cAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGc > 2:5542901/1‑93 (MQ=255)
aGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGcc > 2:4705536/1‑93 (MQ=255)
aGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGcc < 2:5366971/93‑1 (MQ=255)
gATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg > 1:2495450/1‑93 (MQ=255)
gATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg > 2:4418136/1‑93 (MQ=255)
gATTAGCGATACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg > 2:6133723/1‑93 (MQ=255)
aTTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCGGGTGTCGCCGt > 1:1282005/1‑93 (MQ=255)
tAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGttt < 2:3104958/93‑1 (MQ=255)
tAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGttt < 1:4244640/93‑1 (MQ=255)
gTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAc > 1:2963992/1‑93 (MQ=255)
gTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGGCGCCGTTTTCAc > 2:3400444/1‑93 (MQ=255)
ttACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAcc < 2:1107614/93‑1 (MQ=255)
tACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCt < 1:6069192/93‑1 (MQ=255)
aCCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTg < 2:4346395/93‑1 (MQ=255)
aCCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTg < 2:4000431/93‑1 (MQ=255)
aCCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAACTg > 1:964936/1‑93 (MQ=255)
tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatca < 1:3338115/93‑1 (MQ=255)
tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatca < 1:1704665/93‑1 (MQ=255)
tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatca > 1:5793668/1‑93 (MQ=255)
tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGCGTCGCCGTTTTCACCTGattc > 2:1855661/1‑91 (MQ=255)
gACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatcatc > 1:4590253/1‑93 (MQ=255)
aCCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCg > 1:714608/1‑93 (MQ=255)
ccTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGa < 2:3166866/93‑1 (MQ=255)
cTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGGTTTCACCTGATCATCGac > 2:80289/1‑93 (MQ=255)
cTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGTTTTCACCTGATCATCGac > 2:531572/1‑93 (MQ=255)
tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTTGCCGTTTTCACCTGATCATCGaca > 2:2006831/1‑93 (MQ=255)
tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGaca < 1:5267335/93‑1 (MQ=255)
tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGGCGCCGTTTTCAACTGATTATCGaga > 1:4720868/1‑91 (MQ=255)
tttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACt > 2:5876649/1‑93 (MQ=255)
ttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTg < 1:2591227/93‑1 (MQ=255)
aaaTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCaa < 2:2825197/93‑1 (MQ=255)
aaTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAAt < 1:2061888/93‑1 (MQ=255)
aTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATa > 1:496101/1‑93 (MQ=255)
tGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAc < 2:2397658/93‑1 (MQ=255)
tGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAc < 2:1352758/93‑1 (MQ=255)
gctcTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAACg > 2:2422962/4‑93 (MQ=255)
gCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCg < 1:1958046/93‑1 (MQ=255)
cACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCgg < 2:2691319/93‑1 (MQ=255)
cTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaa < 1:2554248/93‑1 (MQ=255)
cTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaa > 2:3470656/1‑93 (MQ=255)
tCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCCTCGACACTGGCAATACCCGaaa > 2:1025159/1‑93 (MQ=255)
agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAata < 2:73687/93‑1 (MQ=255)
agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAata > 2:1127845/1‑93 (MQ=255)
agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAata < 2:2868772/93‑1 (MQ=255)
agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGGTTTCACCTGATCATCGACACTGGCAATACCGGAAata > 2:5706433/1‑93 (MQ=255)
gagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAatat > 1:5162550/1‑93 (MQ=255)
gagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAatat > 1:1025459/1‑93 (MQ=255)
agTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATAtt < 2:4857815/93‑1 (MQ=255)
gtgtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTc < 2:2821803/93‑1 (MQ=255)
tgtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcc < 2:5458524/93‑1 (MQ=255)
gtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTccc < 1:6246463/93‑1 (MQ=255)
gtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTccc < 2:4279267/93‑1 (MQ=255)
tCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcccc < 2:3630727/93‑1 (MQ=255)
gcGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcccc < 2:5564358/92‑1 (MQ=255)
gCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAc > 1:5778320/1‑93 (MQ=255)
ccAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAcc > 2:2627716/1‑93 (MQ=255)
cAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCg > 2:1469862/1‑93 (MQ=255)
cAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTACCCACCg > 1:5908766/1‑93 (MQ=255)
|
TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCG > NC_000913/2794411‑2794590
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTTTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCGCAAC > NC_000913/2794408‑2794594
|
TTTTTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGG < SRR4302533.6083873/94‑1 (MQ=60)
TTTTTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGG > SRR4302533.6058796/1‑94 (MQ=60)
TTTTTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGG > SRR4302533.1646832/1‑94 (MQ=60)
TTTTTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGG > SRR4302533.2692778/1‑94 (MQ=60)
TTTTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGC < SRR4302533.14247/94‑1 (MQ=60)
TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTT < SRR4302533.6137333/94‑1 (MQ=60)
TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTT > SRR4302533.512149/1‑94 (MQ=60)
TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTT < SRR4302533.3990810/94‑1 (MQ=60)
GCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAAC < SRR4302533.6344638/94‑1 (MQ=60)
GCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAAC < SRR4302533.4074125/94‑1 (MQ=60)
CATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACG > SRR4302533.3888690/1‑94 (MQ=60)
ATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGG < SRR4302533.972661/94‑1 (MQ=60)
ATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGG > SRR4302533.5291811/1‑94 (MQ=60)
ATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGG > SRR4302533.2553992/1‑94 (MQ=60)
CGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTA > SRR4302533.5747322/1‑94 (MQ=60)
CGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTA > SRR4302533.5242633/1‑94 (MQ=60)
GGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTAT < SRR4302533.622915/94‑1 (MQ=60)
GGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGGGTCGACAGGCTTAACGGTAA > SRR4302533.6095291/1‑94 (MQ=60)
GTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATA > SRR4302533.1921776/1‑94 (MQ=60)
GTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATA < SRR4302533.1677258/94‑1 (MQ=60)
TATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAA > SRR4302533.1643238/1‑94 (MQ=60)
ATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAC > SRR4302533.4195733/1‑94 (MQ=60)
TCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTG < SRR4302533.1329047/94‑1 (MQ=60)
TCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTG < SRR4302533.1192737/94‑1 (MQ=60)
TCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTG < SRR4302533.2676813/94‑1 (MQ=60)
CGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGG > SRR4302533.3474238/1‑94 (MQ=60)
GCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGC < SRR4302533.291631/94‑1 (MQ=60)
GCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGAACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGC > SRR4302533.2106291/1‑94 (MQ=60)
TTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTG < SRR4302533.4140417/94‑1 (MQ=60)
TTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTG < SRR4302533.4140418/94‑1 (MQ=60)
CGAAGATTTTATTGTACAGATTNGCGTTACCGTAGNCNTGTTTGGAAATGGNACNCAGAGTNTNGCCAGNCTNANCGGTANANNANTNNNNNGC > SRR4302533.750953/1‑94 (MQ=60)
CGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGC > SRR4302533.1395263/1‑94 (MQ=60)
GAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCA > SRR4302533.1473928/1‑94 (MQ=60)
AAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAG > SRR4302533.3127988/1‑94 (MQ=60)
AGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGT < SRR4302533.2073798/94‑1 (MQ=60)
AGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGT < SRR4302533.5764497/94‑1 (MQ=60)
ATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGG > SRR4302533.2349694/1‑94 (MQ=60)
ATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAAAGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGG > SRR4302533.4464410/1‑94 (MQ=60)
TTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGC > SRR4302533.6018864/1‑94 (MQ=60)
TTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGC < SRR4302533.5280046/94‑1 (MQ=60)
TTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCT > SRR4302533.3548431/1‑94 (MQ=60)
TATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGG > SRR4302533.2443753/1‑94 (MQ=60)
ATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGT > SRR4302533.4179892/1‑94 (MQ=60)
ATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGG > SRR4302533.4182863/1‑94 (MQ=60)
TGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGT < SRR4302533.3271878/94‑1 (MQ=60)
TGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGT > SRR4302533.2180528/1‑94 (MQ=60)
AGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCG > SRR4302533.2957664/1‑94 (MQ=60)
AGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCG > SRR4302533.2510843/1‑94 (MQ=60)
GATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGT > SRR4302533.5983888/1‑94 (MQ=60)
GATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCGGGTGTCGCCGT > SRR4302533.1289720/1‑94 (MQ=60)
ATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTT > SRR4302533.4058136/1‑94 (MQ=60)
TTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTT > SRR4302533.6304860/1‑94 (MQ=60)
TAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTT < SRR4302533.4270270/94‑1 (MQ=60)
GCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCA > SRR4302533.525386/1‑94 (MQ=60)
CGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAC > SRR4302533.2982111/1‑94 (MQ=60)
CGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGGTTTCAC > SRR4302533.797876/1‑94 (MQ=60)
GTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACC > SRR4302533.4416251/1‑94 (MQ=60)
TTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCT < SRR4302533.3719680/94‑1 (MQ=60)
TTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCT < SRR4302533.695356/94‑1 (MQ=60)
TACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTG < SRR4302533.6105914/94‑1 (MQ=60)
TACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAACTG > SRR4302533.970599/1‑94 (MQ=60)
ACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGA < SRR4302533.244738/94‑1 (MQ=60)
CGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATC > SRR4302533.5221823/1‑94 (MQ=60)
CGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATC > SRR4302533.4723231/1‑94 (MQ=60)
GTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCA > SRR4302533.3892023/1‑94 (MQ=60)
GTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCA > SRR4302533.5828670/1‑94 (MQ=60)
TAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCAT < SRR4302533.1714990/94‑1 (MQ=60)
TAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCAT < SRR4302533.3358748/94‑1 (MQ=60)
AGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATC > SRR4302533.4618057/1‑94 (MQ=60)
AGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATC > SRR4302533.2575601/1‑94 (MQ=60)
GACCTGTTTGGAAATGGCACTCAGATTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCggtgtttatcttgttgtcg > SRR4302533.2215999/1‑75 (MQ=60)
GACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCG > SRR4302533.718824/1‑94 (MQ=60)
ACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTTATCATCGA > SRR4302533.4527329/1‑94 (MQ=60)
ACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGA > SRR4302533.3126484/1‑94 (MQ=60)
CTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACA > SRR4302533.583759/1‑94 (MQ=60)
CTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACA < SRR4302533.4828721/94‑1 (MQ=60)
CTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGGCGCCGTTTTCAACTGATTATCGAGA > SRR4302533.4749491/1‑94 (MQ=60)
TGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACAC < SRR4302533.5298938/94‑1 (MQ=60)
GTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACT < SRR4302533.1036951/94‑1 (MQ=60)
TTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGG < SRR4302533.2607151/94‑1 (MQ=60)
TTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGG < SRR4302533.3745008/94‑1 (MQ=60)
AAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAAT < SRR4302533.1940605/94‑1 (MQ=60)
AATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATA < SRR4302533.2074604/94‑1 (MQ=60)
AATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATA < SRR4302533.5816063/94‑1 (MQ=60)
AATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATA > SRR4302533.499062/1‑94 (MQ=60)
GCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGG < SRR4302533.1969999/94‑1 (MQ=60)
CACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCCATACCGGA > SRR4302533.2641413/1‑94 (MQ=60)
CTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAA < SRR4302533.2569962/94‑1 (MQ=60)
AGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATAT > SRR4302533.1031485/1‑94 (MQ=60)
AGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATAT > SRR4302533.5193719/1‑94 (MQ=60)
GTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCC < SRR4302533.1873720/94‑1 (MQ=60)
GTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCC < SRR4302533.6283847/94‑1 (MQ=60)
CGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCTTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAC < SRR4302533.2790948/94‑1 (MQ=60)
CGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAC > SRR4302533.5813221/1‑94 (MQ=60)
CGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAC < SRR4302533.5597388/94‑1 (MQ=60)
GCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACC < SRR4302533.1235611/94‑1 (MQ=60)
CCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTACCCACCG > SRR4302533.5944460/1‑94 (MQ=60)
AGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCGCA > SRR4302533.1366663/1‑94 (MQ=60)
GCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCGCAAC > SRR4302533.2645136/1‑94 (MQ=60)
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TTTTTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCGCAAC > NC_000913/2794408‑2794594
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
