Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
981,066 |
A→T |
D266V (GAC→GTC) |
ycbB → |
putative amidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 981,066 | 0 | A | T | 99.6%
| 821.9
/ NA
| 236 | D266V (GAC→GTC) | ycbB | putative amidase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base T (117/117); minor base G (1/0); total (118/118) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 242 total aligned reads displayed.
AACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGACGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAA > NC_000913/980976‑981155
|
aaCTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCg < 1:3380883/93‑1 (MQ=255)
aCTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCgg < 2:6791388/93‑1 (MQ=255)
aCTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCgg > 2:441893/1‑93 (MQ=255)
tGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCgggg < 1:7683176/93‑1 (MQ=255)
tGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCgggg < 2:2030199/93‑1 (MQ=255)
gACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCggggg > 1:2354217/1‑93 (MQ=255)
aCCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCgggggg > 2:6315384/1‑93 (MQ=255)
ccGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGc < 2:827021/93‑1 (MQ=255)
gCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTAGGGGGGCCGa > 2:4941864/1‑93 (MQ=255)
cAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGaa < 1:4240467/93‑1 (MQ=255)
gCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAAtt < 2:3443128/93‑1 (MQ=255)
aaCGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTAc > 1:6129141/1‑93 (MQ=255)
aCGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTAcc > 2:6392666/1‑92 (MQ=255)
gTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTActct > 2:1586872/1‑93 (MQ=255)
gTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTActct > 1:8083685/1‑93 (MQ=255)
ttGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTa > 1:355432/1‑93 (MQ=255)
ttGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTa > 2:3913549/1‑93 (MQ=255)
tGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTAc > 2:5075784/1‑93 (MQ=255)
gcgcCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGGCGAAAATTACTCTAcc > 2:7520243/1‑93 (MQ=255)
cgcCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCt < 1:5863153/93‑1 (MQ=255)
cgcCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCt < 2:4230006/93‑1 (MQ=255)
cgcCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCt < 2:6034765/93‑1 (MQ=255)
gcCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTg > 1:3901233/1‑93 (MQ=255)
cAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCg < 1:2570873/93‑1 (MQ=255)
aGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGa < 1:7564529/93‑1 (MQ=255)
aGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGa < 2:8106958/93‑1 (MQ=255)
aGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGa < 2:573874/93‑1 (MQ=255)
aGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGa < 1:1139239/93‑1 (MQ=255)
aGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGa > 1:1194335/1‑93 (MQ=255)
aGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAACTACTCTACCTCGCGa > 2:3825831/1‑93 (MQ=255)
gggCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGAt > 2:3246849/1‑93 (MQ=255)
gggCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGAt < 2:8687127/93‑1 (MQ=255)
ggCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATg < 1:7776107/93‑1 (MQ=255)
ggCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATg < 2:6893463/93‑1 (MQ=255)
gCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGACGGGGGGCCGAAAATTACTCTACCTGGCGATGa < 2:7190742/93‑1 (MQ=255)
cAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCgacgac < 2:257137/93‑1 (MQ=255)
cAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGac < 1:6856649/93‑1 (MQ=255)
cAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGac > 2:1431364/1‑93 (MQ=255)
cAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGac < 2:6542108/93‑1 (MQ=255)
aGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGaca > 2:2899545/1‑93 (MQ=255)
aGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACATGGCGATGaca > 1:2911276/1‑93 (MQ=255)
gtagAGTAACGACGTACCGGCGTTGCGCGAAATATTACAACGCACAGACATGTTGATCGGGGGGCCGAAAAATACTCTACATGGCGATGacac < 2:7815137/90‑1 (MQ=255)
gTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGacac > 1:5481917/1‑93 (MQ=255)
gTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGacac < 2:1156580/93‑1 (MQ=255)
tGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACg > 1:1827650/1‑93 (MQ=255)
cggAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACg < 2:5110080/92‑1 (MQ=255)
gAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGcc > 2:5859117/1‑93 (MQ=255)
tAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAAc < 1:4883547/93‑1 (MQ=255)
cgacgTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGa < 1:7117833/93‑1 (MQ=255)
cgacgTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGa < 1:633806/93‑1 (MQ=255)
acgTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGAcg < 2:6218310/93‑1 (MQ=255)
ccGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTa > 1:70386/1‑93 (MQ=255)
cGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAg < 2:4611559/93‑1 (MQ=255)
cGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAg < 1:8641338/93‑1 (MQ=255)
gCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTc < 2:2175382/93‑1 (MQ=255)
gCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTc < 2:5338037/93‑1 (MQ=255)
gCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTc > 1:8339640/1‑93 (MQ=255)
gCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTc < 2:7673023/93‑1 (MQ=255)
gCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTc < 1:1550531/93‑1 (MQ=255)
cGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCa < 2:3992760/93‑1 (MQ=255)
gTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCac > 2:2539868/1‑92 (MQ=255)
gTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAg > 2:8477406/1‑93 (MQ=255)
gTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAg > 2:5539605/1‑93 (MQ=255)
gTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAg > 2:1023466/1‑93 (MQ=255)
gTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCACACTGACGCGGTAGTCAg > 2:1062153/1‑93 (MQ=255)
cgAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATc < 2:2797550/93‑1 (MQ=255)
cgAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATc < 1:5191752/93‑1 (MQ=255)
gAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTAAGCCCATcc > 2:5669795/1‑93 (MQ=255)
gAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGCCAGCCCATcc > 2:1833394/1‑93 (MQ=255)
aaaTATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCg > 1:7278839/1‑93 (MQ=255)
aaTATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGc < 1:5063502/93‑1 (MQ=255)
aaTATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGc < 2:4691897/93‑1 (MQ=255)
aaTATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGc < 1:2179737/93‑1 (MQ=255)
aaTATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGc > 1:8106393/1‑93 (MQ=255)
aaTATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGc < 1:2526387/93‑1 (MQ=255)
atatTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCt < 2:191666/93‑1 (MQ=255)
atTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGt < 2:7632986/93‑1 (MQ=255)
ttGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGtt < 2:597171/93‑1 (MQ=255)
ttGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGtt > 1:330053/1‑93 (MQ=255)
ttGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGtt < 1:5808990/93‑1 (MQ=255)
gCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGCCGCGGTAGTCAGCCCATCCGCTGTTag > 2:5275901/1‑92 (MQ=255)
gCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTAc < 1:4042256/93‑1 (MQ=255)
gCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTAc > 2:4924473/1‑93 (MQ=255)
cAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACt < 1:6948526/93‑1 (MQ=255)
aaCGCACAGGCATGTTGGTCGGGGGGCCGAAAATTCCTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTg < 2:5411690/93‑1 (MQ=255)
aCGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGt < 2:3592396/93‑1 (MQ=255)
cGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGtt < 2:314742/93‑1 (MQ=255)
cGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGtt < 1:493425/93‑1 (MQ=255)
gCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTg > 2:8745191/1‑93 (MQ=255)
cacaGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGa < 2:7073311/93‑1 (MQ=255)
acaGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGaa > 1:3067019/1‑93 (MQ=255)
aGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAc > 1:5296036/1‑93 (MQ=255)
aGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAc > 2:560311/1‑93 (MQ=255)
ggCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAca > 2:8172467/1‑93 (MQ=255)
cATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAcagc < 2:4812897/93‑1 (MQ=255)
aTGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAcagca > 1:411110/1‑93 (MQ=255)
aTGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAcagca < 1:6484685/93‑1 (MQ=255)
aTGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAcagca > 2:2321496/1‑93 (MQ=255)
aTGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGCAGTCAGCCCATCCGCTGTTACTGTTGAAAcagca > 2:8062360/1‑93 (MQ=255)
tGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAcagcag < 2:7256927/93‑1 (MQ=255)
|
AACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGACGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAA > NC_000913/980976‑981155
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGACGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAACTAA > NC_000913/980973‑981159
|
CCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGT < SRR4302541.141748/94‑1 (MQ=60)
CCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGT < SRR4302541.877346/94‑1 (MQ=60)
CCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGT < SRR4302541.2258136/94‑1 (MQ=60)
CCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGT < SRR4302541.6957350/94‑1 (MQ=60)
CCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGT > SRR4302541.1891622/1‑94 (MQ=60)
CCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGGGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTC > SRR4302541.7899101/1‑94 (MQ=60)
CCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTC > SRR4302541.3755978/1‑94 (MQ=60)
CCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTC < SRR4302541.5353309/94‑1 (MQ=60)
CCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTC < SRR4302541.2230567/94‑1 (MQ=60)
AACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGG > SRR4302541.723628/1‑94 (MQ=60)
AACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGG < SRR4302541.3414586/94‑1 (MQ=60)
CTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGG > SRR4302541.7662250/1‑94 (MQ=60)
CTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGG > SRR4302541.8725030/1‑94 (MQ=60)
TGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGG < SRR4302541.7764858/94‑1 (MQ=60)
TGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGG > SRR4302541.2377135/1‑94 (MQ=60)
GACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGG < SRR4302541.2290046/94‑1 (MQ=60)
CGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCG < SRR4302541.3337305/94‑1 (MQ=60)
GGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGA > SRR4302541.6175087/1‑94 (MQ=60)
CAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAA > SRR4302541.3291168/1‑94 (MQ=60)
CAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAA < SRR4302541.4282772/94‑1 (MQ=60)
CAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAA > SRR4302541.5516354/1‑94 (MQ=60)
CAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTAC > SRR4302541.6191726/1‑94 (MQ=60)
CAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTAC > SRR4302541.2166463/1‑94 (MQ=60)
AACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACT > SRR4302541.5587582/1‑94 (MQ=60)
ACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTC > SRR4302541.2591301/1‑94 (MQ=60)
CGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCT > SRR4302541.7774216/1‑94 (MQ=60)
CGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCT > SRR4302541.8172331/1‑94 (MQ=60)
GTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTA > SRR4302541.4126464/1‑94 (MQ=60)
GTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTA > SRR4302541.358643/1‑94 (MQ=60)
TTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTAC > SRR4302541.1605420/1‑94 (MQ=60)
CGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTG > SRR4302541.3940266/1‑94 (MQ=60)
CGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTG < SRR4302541.5922796/94‑1 (MQ=60)
GCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGG > SRR4302541.952097/1‑94 (MQ=60)
GCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGG < SRR4302541.7680955/94‑1 (MQ=60)
CAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGA < SRR4302541.2596648/94‑1 (MQ=60)
CAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGA > SRR4302541.1205918/1‑94 (MQ=60)
AGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGAT < SRR4302541.7645372/94‑1 (MQ=60)
AGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGAT < SRR4302541.7645371/94‑1 (MQ=60)
AGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGAT < SRR4302541.1150061/94‑1 (MQ=60)
AGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGAT > SRR4302541.3781886/1‑94 (MQ=60)
GGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGA < SRR4302541.7858834/94‑1 (MQ=60)
GCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGAC > SRR4302541.8159747/1‑94 (MQ=60)
CAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACC > SRR4302541.2655250/1‑94 (MQ=60)
CAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACA < SRR4302541.447617/94‑1 (MQ=60)
CAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACA < SRR4302541.547162/94‑1 (MQ=60)
CAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACA < SRR4302541.6929924/94‑1 (MQ=60)
CAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACATGGCGATGACA > SRR4302541.2940542/1‑94 (MQ=60)
AGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACAC > SRR4302541.5898271/1‑94 (MQ=60)
AGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACAC < SRR4302541.1743754/94‑1 (MQ=60)
AGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACAC > SRR4302541.5538118/1‑94 (MQ=60)
GTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACG > SRR4302541.1845375/1‑94 (MQ=60)
GGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCC < SRR4302541.298051/94‑1 (MQ=60)
GAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCA < SRR4302541.8176787/94‑1 (MQ=60)
TAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACT < SRR4302541.4933382/94‑1 (MQ=60)
AACGACGTTCCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTG < SRR4302541.6452798/94‑1 (MQ=60)
AACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTG > SRR4302541.6503399/1‑94 (MQ=60)
CGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGAC < SRR4302541.7193644/94‑1 (MQ=60)
CGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGAC < SRR4302541.639767/94‑1 (MQ=60)
CGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGAC < SRR4302541.7193645/94‑1 (MQ=60)
GACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACG < SRR4302541.7010218/94‑1 (MQ=60)
GACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACG > SRR4302541.2845488/1‑94 (MQ=60)
CGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCG > SRR4302541.4253692/1‑94 (MQ=60)
GTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGG > SRR4302541.2392878/1‑94 (MQ=60)
ACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTA > SRR4302541.70973/1‑94 (MQ=60)
CGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGT < SRR4302541.8733900/94‑1 (MQ=60)
GGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTC > SRR4302541.8430188/1‑94 (MQ=60)
GCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCA < SRR4302541.1566083/94‑1 (MQ=60)
GCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCA < SRR4302541.6718456/94‑1 (MQ=60)
GCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCA < SRR4302541.4004345/94‑1 (MQ=60)
CGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACCGACGCGGAAGTCAG > SRR4302541.1326481/1‑94 (MQ=60)
CGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTCCCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCC < SRR4302541.5225362/94‑1 (MQ=60)
CGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCC < SRR4302541.5245172/94‑1 (MQ=60)
CGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCC > SRR4302541.3585035/1‑94 (MQ=60)
CGAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGACCATCC > SRR4302541.8153448/1‑94 (MQ=60)
GAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCG > SRR4302541.7356497/1‑94 (MQ=60)
GAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCG < SRR4302541.1159952/94‑1 (MQ=60)
GAAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCG > SRR4302541.2284623/1‑94 (MQ=60)
AAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGC > SRR4302541.5891934/1‑94 (MQ=60)
AAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGC > SRR4302541.8195235/1‑94 (MQ=60)
AAATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGC > SRR4302541.449046/1‑94 (MQ=60)
AATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCT < SRR4302541.2200801/94‑1 (MQ=60)
AATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCT < SRR4302541.2551791/94‑1 (MQ=60)
AATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCT < SRR4302541.5115567/94‑1 (MQ=60)
AATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCT > SRR4302541.7014060/1‑94 (MQ=60)
ATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTG > SRR4302541.3248359/1‑94 (MQ=60)
ATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTG > SRR4302541.8558294/1‑94 (MQ=60)
ATATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTG > SRR4302541.6197650/1‑94 (MQ=60)
ATTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTT > SRR4302541.333013/1‑94 (MQ=60)
TTGCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTA < SRR4302541.5868012/94‑1 (MQ=60)
GCAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACT < SRR4302541.4082167/94‑1 (MQ=60)
CAACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTG < SRR4302541.7022638/94‑1 (MQ=60)
AACGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGT > SRR4302541.5226404/1‑94 (MQ=60)
CGCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTG < SRR4302541.498082/94‑1 (MQ=60)
GCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGA < SRR4302541.5089849/94‑1 (MQ=60)
GCACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGA < SRR4302541.839655/94‑1 (MQ=60)
CACAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAA > SRR4302541.3098116/1‑94 (MQ=60)
CAGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAAC > SRR4302541.5350553/1‑94 (MQ=60)
AGGCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACA < SRR4302541.4937500/94‑1 (MQ=60)
GCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGC < SRR4302541.4114966/94‑1 (MQ=60)
GCATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGC < SRR4302541.7101797/94‑1 (MQ=60)
CATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCA > SRR4302541.414921/1‑94 (MQ=60)
ATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAG < SRR4302541.5308110/94‑1 (MQ=60)
ATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAG < SRR4302541.6550784/94‑1 (MQ=60)
ATGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAG > SRR4302541.711794/1‑94 (MQ=60)
TGTTGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGA > SRR4302541.3452623/1‑94 (MQ=60)
TGGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAAC > SRR4302541.3876118/1‑94 (MQ=60)
GGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAACT > SRR4302541.3899929/1‑94 (MQ=60)
GGTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAACT < SRR4302541.7387659/94‑1 (MQ=60)
GTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAACTA < SRR4302541.3864385/94‑1 (MQ=60)
GTCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACCCCAACTGACGCGGTAGTCAGCCCCTCCGCTGTTACTGTTcacacgcccacaagta > SRR4302541.5038338/1‑78 (MQ=60)
TCGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAACTAA < SRR4302541.2931782/94‑1 (MQ=60)
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CCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGACGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAACTAA > NC_000913/980973‑981159
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
