Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,019,358 |
T→C |
intergenic (‑82/+275) |
ompA ← / ← sulA |
outer membrane protein 3a/suppressor of lon |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,019,358 | 0 | T | C | 99.5%
| 647.7
/ ‑4.5
| 190 | intergenic (‑82/+275) | ompA/sulA | outer membrane protein 3a/suppressor of lon |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (86/103); total (87/103) |
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01 |
Only 100 of 194 total aligned reads displayed.
CTTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCTGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTG > NC_000913/1019268‑1019447
|
cTTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGc < 2:2221876/93‑1 (MQ=255)
tttttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCt > 1:679330/1‑93 (MQ=255)
tttttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCt < 1:6507721/93‑1 (MQ=255)
ttttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTTACCGGGGGATCCGCTc < 2:8363208/93‑1 (MQ=255)
ttttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTc > 1:7388132/1‑93 (MQ=255)
ttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCaa < 2:842809/93‑1 (MQ=255)
tCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAat < 2:1611029/93‑1 (MQ=255)
cATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAata < 1:5420159/93‑1 (MQ=255)
cATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAata < 1:4408756/93‑1 (MQ=255)
aTTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAatat < 2:1401136/93‑1 (MQ=255)
ttttGCGACTCGTTATCATCCAAAATACGCCATGAATATCCCCAACGAGATAACACTGTTAAATCCTTCACCGGGGGATCCGCTCAATAttta < 2:7203895/93‑3 (MQ=255)
tGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAActc < 2:7721333/93‑1 (MQ=255)
tGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAActc < 2:750165/93‑1 (MQ=255)
tGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAActc < 1:772856/93‑1 (MQ=255)
gcgcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCTGGGGATCCGCTCAATATTAActct > 2:8055636/1‑93 (MQ=255)
gcgcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAActct > 2:4474676/1‑93 (MQ=255)
gcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTAc > 2:3678998/1‑93 (MQ=255)
gcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTAc > 2:4874666/1‑93 (MQ=255)
ccTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTAcc > 2:7159797/1‑93 (MQ=255)
tCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGa > 1:1814574/1‑93 (MQ=255)
tCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGa > 1:5083258/1‑93 (MQ=255)
tCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGa > 2:5558579/1‑93 (MQ=255)
cGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGat < 2:8478535/93‑1 (MQ=255)
ttATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGatat > 1:8028331/1‑93 (MQ=255)
ttATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGatat > 1:2935042/1‑93 (MQ=255)
ttATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGatat > 1:692401/1‑93 (MQ=255)
tATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGatatt > 2:1331534/1‑92 (MQ=255)
atcatcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCt > 2:8282373/1‑93 (MQ=255)
atcatcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCt < 2:2820329/93‑1 (MQ=255)
atcatcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACACTACCGATATCt < 2:632797/93‑1 (MQ=255)
catcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTc < 2:6794134/93‑1 (MQ=255)
atcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCg < 1:2232251/93‑1 (MQ=255)
tcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCgg > 2:3190864/1‑93 (MQ=255)
ccAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGc < 1:1085207/93‑1 (MQ=255)
cAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCt < 1:3654848/93‑1 (MQ=255)
cAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCt < 2:5978111/93‑1 (MQ=255)
aaaaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCtt > 2:3437578/1‑93 (MQ=255)
aaaaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCtt < 1:937751/93‑1 (MQ=255)
aaaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTa < 2:3273144/93‑1 (MQ=255)
aaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTAt < 1:5276822/93‑1 (MQ=255)
aaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTAt < 1:2175653/93‑1 (MQ=255)
aaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTAt < 2:1164420/93‑1 (MQ=255)
aTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATg < 2:1088274/93‑1 (MQ=255)
tACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGc < 2:5129698/93‑1 (MQ=255)
aaCGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGc < 1:688039/92‑1 (MQ=255)
aCGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGcc < 1:5426911/93‑1 (MQ=255)
aCGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGcc < 1:3136399/93‑1 (MQ=255)
gCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGa > 1:7148439/1‑93 (MQ=255)
tGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAc > 1:4593823/1‑93 (MQ=255)
tGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAc < 2:2502752/93‑1 (MQ=255)
gAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcc < 2:8153239/93‑1 (MQ=255)
gAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcc < 1:4174541/93‑1 (MQ=255)
aaTATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAccc > 2:3976877/1‑93 (MQ=255)
aaTATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAccc < 1:6482881/93‑1 (MQ=255)
aaTATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAccc < 1:6931526/93‑1 (MQ=255)
aaTATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAccc > 1:3662371/1‑93 (MQ=255)
atatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCTGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcccc > 2:5453385/1‑93 (MQ=255)
atatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcccc < 2:2008381/93‑1 (MQ=255)
atatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcccc < 1:2712471/93‑1 (MQ=255)
atatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcccc < 2:2917352/93‑1 (MQ=255)
tatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCt < 2:1227000/93‑1 (MQ=255)
tatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCt < 1:8252465/93‑1 (MQ=255)
cAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGAt > 2:1935030/1‑93 (MQ=255)
cGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGTGATGTa > 1:489791/1‑93 (MQ=255)
cGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTa < 2:6068950/93‑1 (MQ=255)
gagaTAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTaa < 2:3339216/93‑1 (MQ=255)
agaTAACACGGTTAAATCCTTCACCTGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTaaa > 1:7020069/1‑93 (MQ=255)
agaTAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTaaa < 2:8716230/93‑1 (MQ=255)
tAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTc > 1:1473068/1‑93 (MQ=255)
aaCACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCt < 1:3519411/93‑1 (MQ=255)
acacGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTa < 1:2695207/93‑1 (MQ=255)
cacGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTAc < 1:386215/93‑1 (MQ=255)
cacGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTAc < 2:3695459/93‑1 (MQ=255)
acGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACa > 1:157005/1‑93 (MQ=255)
ggTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAAc < 1:7914601/93‑1 (MQ=255)
ggTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAAc > 2:6755817/1‑93 (MQ=255)
ggTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAAc > 2:567517/1‑93 (MQ=255)
tAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTa < 2:6286755/93‑1 (MQ=255)
aaTCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGt < 1:1161459/93‑1 (MQ=255)
aaTCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGt < 1:8702565/93‑1 (MQ=255)
ccTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGa > 1:3941419/1‑93 (MQ=255)
ccTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGa > 1:4780341/1‑93 (MQ=255)
ccTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGa > 1:5700513/1‑93 (MQ=255)
ccTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGACGTAAAGTCTACAACGTAGTTGa > 2:4367070/1‑93 (MQ=255)
cTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGaa > 2:2462680/1‑93 (MQ=255)
ttCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGaaa > 2:790242/1‑93 (MQ=255)
ttCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGaaa > 1:749335/1‑93 (MQ=255)
cACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAAc > 2:884607/1‑93 (MQ=255)
cACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAAc < 2:6452486/93‑1 (MQ=255)
aCCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACt > 1:5857692/1‑93 (MQ=255)
cGGGGTATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCCCCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTa < 2:7926189/93‑1 (MQ=255)
gggggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTAc > 2:7461383/1‑93 (MQ=255)
ggggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACa > 1:2838896/1‑93 (MQ=255)
ggggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCCAGCACCCCTGGCGATTTAAAGTCTACAACGTAGTTGAAAACTTACa < 2:4313149/93‑1 (MQ=255)
gggATCCGCTCATTATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACaa < 2:5053768/93‑1 (MQ=255)
gggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACaa > 1:592195/1‑93 (MQ=255)
ggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAg < 1:2602882/93‑1 (MQ=255)
aTCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAgtg < 1:8364278/93‑1 (MQ=255)
aTCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAgtg < 1:847846/93‑1 (MQ=255)
aTCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACACCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAgtg > 1:6080241/1‑93 (MQ=255)
|
CTTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCTGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTG > NC_000913/1019268‑1019447
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCTTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCTGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGTGAA > NC_000913/1019266‑1019451
|
GTCTTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCG > SRR4302541.4015875/1‑94 (MQ=60)
GTCTTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCG > SRR4302541.1377946/1‑94 (MQ=60)
CTTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCT > SRR4302541.685742/1‑94 (MQ=60)
TTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTC > SRR4302541.7467131/1‑94 (MQ=60)
TTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTC < SRR4302541.6574109/94‑1 (MQ=60)
TTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAA > SRR4302541.7037686/1‑94 (MQ=60)
TTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAAT > SRR4302541.4533371/1‑94 (MQ=60)
CATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACTAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATAT < SRR4302541.6568460/94‑1 (MQ=60)
CATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATAT < SRR4302541.4452911/94‑1 (MQ=60)
CATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATAT < SRR4302541.5475756/94‑1 (MQ=60)
TTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAAC < SRR4302541.5978742/94‑1 (MQ=60)
TTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAAC > SRR4302541.6443839/1‑94 (MQ=60)
TGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCT < SRR4302541.6836566/94‑1 (MQ=60)
TGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCT < SRR4302541.780081/94‑1 (MQ=60)
CTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGA > SRR4302541.1832216/1‑94 (MQ=60)
CTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGA > SRR4302541.7181495/1‑94 (MQ=60)
CTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGA < SRR4302541.2900308/94‑1 (MQ=60)
CTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGA > SRR4302541.5135479/1‑94 (MQ=60)
CGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATA > SRR4302541.4299423/1‑94 (MQ=60)
CGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATA > SRR4302541.8161129/1‑94 (MQ=60)
GTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATAT > SRR4302541.698920/1‑94 (MQ=60)
GTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATAT > SRR4302541.699152/1‑94 (MQ=60)
GTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATAT > SRR4302541.2964555/1‑94 (MQ=60)
GTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATAT > SRR4302541.8116593/1‑94 (MQ=60)
CATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCG > SRR4302541.604581/1‑94 (MQ=60)
ATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGG > SRR4302541.6971464/1‑94 (MQ=60)
ATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGG < SRR4302541.2253872/94‑1 (MQ=60)
CCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCT > SRR4302541.7685764/1‑94 (MQ=60)
CCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCT < SRR4302541.1095343/94‑1 (MQ=60)
CAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTT < SRR4302541.3691924/94‑1 (MQ=60)
CAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTT < SRR4302541.3691925/94‑1 (MQ=60)
AAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTA < SRR4302541.946662/94‑1 (MQ=60)
AATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATG < SRR4302541.5331160/94‑1 (MQ=60)
AATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATG < SRR4302541.2196675/94‑1 (MQ=60)
TACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCC < SRR4302541.5353254/94‑1 (MQ=60)
AACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCC < SRR4302541.694515/94‑1 (MQ=60)
AACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCC < SRR4302541.725899/94‑1 (MQ=60)
ACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCG < SRR4302541.5482591/94‑1 (MQ=60)
ACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCG < SRR4302541.3168093/94‑1 (MQ=60)
CGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGA > SRR4302541.7224634/1‑94 (MQ=60)
CCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGC < SRR4302541.7824539/94‑1 (MQ=60)
CCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGC < SRR4302541.5479940/94‑1 (MQ=60)
CCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGC < SRR4302541.8363298/94‑1 (MQ=60)
CATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCA > SRR4302541.8770281/1‑94 (MQ=60)
ATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTGAATCTTAACTCTACCGATATCTCCAGCTTAGACCGAGCAC > SRR4302541.4640416/1‑94 (MQ=60)
ATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAC > SRR4302541.4640415/1‑94 (MQ=60)
GAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCC > SRR4302541.3699531/1‑94 (MQ=60)
GAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCC < SRR4302541.4215940/94‑1 (MQ=60)
AATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCC < SRR4302541.7005488/94‑1 (MQ=60)
AATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCC < SRR4302541.6548958/94‑1 (MQ=60)
ATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCT < SRR4302541.2739496/94‑1 (MQ=60)
ATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCT > SRR4302541.3291795/1‑94 (MQ=60)
TATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCTTG > SRR4302541.7538656/1‑94 (MQ=60)
TATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTG < SRR4302541.8342343/94‑1 (MQ=60)
TCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGC < SRR4302541.4032174/94‑1 (MQ=60)
CAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATG > SRR4302541.2769555/1‑94 (MQ=60)
AACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGT < SRR4302541.8105535/94‑1 (MQ=60)
AACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGT > SRR4302541.2715356/1‑94 (MQ=60)
ACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGTGATGTA > SRR4302541.494425/1‑94 (MQ=60)
ACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTA > SRR4302541.198456/1‑94 (MQ=60)
GAGATAACACGGTTAAATCCTTCACCTGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAA > SRR4302541.7094707/1‑94 (MQ=60)
AGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAG < SRR4302541.5740075/94‑1 (MQ=60)
ATAACGCGTTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTC < SRR4302541.2395249/94‑1 (MQ=60)
ATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTC > SRR4302541.1487520/1‑94 (MQ=60)
TAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCT > SRR4302541.1278069/1‑94 (MQ=60)
AACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTA < SRR4302541.3554816/94‑1 (MQ=60)
ACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTAC < SRR4302541.2721985/94‑1 (MQ=60)
CACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACA > SRR4302541.158180/1‑94 (MQ=60)
CACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACA < SRR4302541.389780/94‑1 (MQ=60)
CGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAAC < SRR4302541.3065171/94‑1 (MQ=60)
CGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTGCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAAC < SRR4302541.1530431/94‑1 (MQ=60)
GGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACG > SRR4302541.2233835/1‑94 (MQ=60)
GGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACG > SRR4302541.8553760/1‑94 (MQ=60)
GGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACG < SRR4302541.8001698/94‑1 (MQ=60)
TAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAG < SRR4302541.2733221/94‑1 (MQ=60)
AATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTT < SRR4302541.505254/94‑1 (MQ=60)
AATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTT < SRR4302541.1172607/94‑1 (MQ=60)
AATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTT < SRR4302541.8795690/94‑1 (MQ=60)
ATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTTGCGATGTAAAGTCTACAACGTAGTTG > SRR4302541.578321/1‑94 (MQ=60)
TCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGA > SRR4302541.5758642/1‑94 (MQ=60)
TCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGA < SRR4302541.886021/94‑1 (MQ=60)
TCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGA > SRR4302541.3980633/1‑94 (MQ=60)
TCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGA > SRR4302541.4829136/1‑94 (MQ=60)
CTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAA > SRR4302541.3739672/1‑94 (MQ=60)
CTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAA > SRR4302541.756421/1‑94 (MQ=60)
TTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAA < SRR4302541.5146386/94‑1 (MQ=60)
CACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACT > SRR4302541.5917260/1‑94 (MQ=60)
ACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTT > SRR4302541.1692841/1‑94 (MQ=60)
CCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTA > SRR4302541.3604360/1‑94 (MQ=60)
GGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACA > SRR4302541.2867454/1‑94 (MQ=60)
GGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAA > SRR4302541.597772/1‑94 (MQ=60)
GGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGT < SRR4302541.4917219/94‑1 (MQ=60)
GGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGT < SRR4302541.2628934/94‑1 (MQ=60)
GATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACACCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTG > SRR4302541.6142307/1‑94 (MQ=60)
ATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGT > SRR4302541.823131/1‑94 (MQ=60)
ATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGT < SRR4302541.8454981/94‑1 (MQ=60)
ATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGT < SRR4302541.855552/94‑1 (MQ=60)
TCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGTG > SRR4302541.8001624/1‑94 (MQ=60)
TCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGTG < SRR4302541.1676959/94‑1 (MQ=60)
CGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGTGAA > SRR4302541.7374031/1‑94 (MQ=60)
CGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGTGAA > SRR4302541.529267/1‑94 (MQ=60)
CGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGAACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGTGAA < SRR4302541.7101078/94‑1 (MQ=60)
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GTCTTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCTGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTGTGAA > NC_000913/1019266‑1019451
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
