Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,520,926 |
A→G |
M55T (ATG→ACG) |
b1451 ← |
putative outer membrane receptor for iron transport |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,520,926 | 0 | A | G | 99.7%
| 1009.1
/ ‑4.8
| 296 | M55T (ATG→ACG) | b1451 | putative outer membrane receptor for iron transport |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (160/134); total (162/134) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 |
Only 100 of 311 total aligned reads displayed.
TCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCACGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCATCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCA > NC_000913/1520836‑1521015
|
tCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGtc < 1:1002578/93‑1 (MQ=255)
tCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGtc < 2:3718995/93‑1 (MQ=255)
tCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGtc > 2:1487416/1‑93 (MQ=255)
tCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGtc < 2:745668/93‑1 (MQ=255)
ttGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGtctc < 2:8685764/93‑1 (MQ=255)
ttGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGtctc < 1:6337537/93‑1 (MQ=255)
ttGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGtctc > 1:3787617/1‑93 (MQ=255)
tGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGGTTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTctcc > 1:3318695/1‑93 (MQ=255)
tGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTgtcc > 2:1110645/1‑93 (MQ=255)
tGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTctcc > 2:3926249/1‑93 (MQ=255)
gcgcATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTctcct < 1:2995002/93‑1 (MQ=255)
gcATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCg > 2:2135607/1‑93 (MQ=255)
gcATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCg > 1:4084552/1‑93 (MQ=255)
tAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCa < 2:5240072/93‑1 (MQ=255)
tAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCa > 1:2362324/1‑93 (MQ=255)
aGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCAt < 2:3295466/93‑1 (MQ=255)
gTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATc > 2:8007045/1‑93 (MQ=255)
gTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATc > 2:2294017/1‑93 (MQ=255)
ttCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATcc > 1:6419397/1‑93 (MQ=255)
tCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATcca > 2:7763114/1‑93 (MQ=255)
tCTGCCGGTTTTGTACCTGCAAACCAGGCACGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCATCTCCTCGCCATcca > 1:1487945/1‑93 (MQ=255)
cTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATccac > 2:6520279/1‑93 (MQ=255)
tGCTGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATccacc < 1:526659/93‑1 (MQ=255)
ccGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCcaccac > 1:5941496/1‑93 (MQ=255)
cGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACg > 1:1583329/1‑93 (MQ=255)
ggTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGc > 2:4949366/1‑93 (MQ=255)
ggTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGc > 1:6901007/1‑93 (MQ=255)
ggTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGc < 2:5614046/93‑1 (MQ=255)
ttttGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCtt < 2:3140409/93‑1 (MQ=255)
tttGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTa > 2:4502987/1‑93 (MQ=255)
ttGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTAc > 1:4796634/1‑93 (MQ=255)
ttGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTAc > 1:7962707/1‑93 (MQ=255)
tGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTAct < 1:8213365/93‑1 (MQ=255)
tGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTAct < 2:5001940/93‑1 (MQ=255)
gTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTActg < 2:7173897/93‑1 (MQ=255)
tACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTActgc < 2:5788309/93‑1 (MQ=255)
ccTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTActgctg > 1:5776335/1‑93 (MQ=255)
ccTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTActgctg < 2:7586287/93‑1 (MQ=255)
ccTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTActgctg > 1:2016338/1‑93 (MQ=255)
cTGCAAACCAGGCGCGCCGGTCAGTGAGTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTActgctgc > 2:4539430/1‑93 (MQ=255)
tGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTActgctgct < 1:4668824/93‑1 (MQ=255)
cAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTgg < 1:4502014/93‑1 (MQ=255)
cAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTgg < 2:7277479/93‑1 (MQ=255)
aaCCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTgggg < 1:363632/93‑1 (MQ=255)
aaCCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTgggg > 1:853965/1‑93 (MQ=255)
aaCCAGGCGCGCCGGTCAGTGATTCGGACAAGCTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTggag > 2:4892335/1‑91 (MQ=255)
aaCCAGGCGCGCCGGTCAGTGATTAGGACAAGTTAATGCGCGGTGTTGCCAGGTGCGTCTCCTCGCCATATCCCACGCTTACTGCTGCTgggg > 2:4311646/1‑93 (MQ=255)
aCCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGt > 2:4854474/1‑93 (MQ=255)
aCCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGt < 1:1058060/93‑1 (MQ=255)
cAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTAt < 2:5438543/93‑1 (MQ=255)
cAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTAt > 1:3201141/1‑93 (MQ=255)
aGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATc > 2:1251698/1‑93 (MQ=255)
ggCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATcc < 2:1753156/93‑1 (MQ=255)
ggCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATcc > 1:1814486/1‑93 (MQ=255)
gcgcGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCa < 1:568679/90‑1 (MQ=255)
gcgcGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCa > 2:4444338/4‑93 (MQ=255)
gcgcGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTCGGGTATCCa > 2:8791557/4‑93 (MQ=255)
cgcGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAg < 2:2605446/91‑1 (MQ=255)
cgcGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAg > 1:7168809/3‑93 (MQ=255)
gcGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGt > 1:3405061/2‑93 (MQ=255)
gCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTc > 2:7877176/1‑93 (MQ=255)
gTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGaa > 2:2228982/1‑93 (MQ=255)
tCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGaaa > 2:5154494/1‑93 (MQ=255)
gTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAacca > 1:8409999/1‑93 (MQ=255)
gATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAaccacc < 2:3623364/93‑1 (MQ=255)
gATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAaccacc < 2:340837/93‑1 (MQ=255)
aTTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCt > 1:8103264/1‑93 (MQ=255)
aTTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCt > 2:6959437/1‑93 (MQ=255)
ggACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCtgcgg > 1:6510327/1‑93 (MQ=255)
ggACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCtgcgg < 2:3532655/93‑1 (MQ=255)
gACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCtgcggt > 2:6849636/1‑93 (MQ=255)
aCAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCtgcggtg > 1:8660719/1‑93 (MQ=255)
cAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCtgcggtgc > 1:7654694/1‑93 (MQ=255)
cAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCtgcggtgc < 1:4052405/93‑1 (MQ=255)
aaGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCtgcggtgcg > 2:1890588/1‑93 (MQ=255)
aaGTTAATGCGCGGGGTTGCCATGAGCGTGTCCTAGCCATCCATCACGCTTACTGCTGCTGGGGTATACCGATCTGAAACCACCtgcggggcg > 2:4065474/1‑93 (MQ=255)
aGTTAATGCGCGGTGTTGCCAGGCACGTCTCCTGGCCATCCACCACGCTTACTGCTGCTGGGGTAGCCAGTTCTGAAACCACCtgcggtgcgg < 1:4259065/93‑1 (MQ=255)
gTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGc > 2:8545426/1‑93 (MQ=255)
ttAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCa > 1:7471528/1‑93 (MQ=255)
tAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCAc < 1:6609222/93‑1 (MQ=255)
aTGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTg < 2:890230/93‑1 (MQ=255)
gcgcGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGTTATCCAGTTCTGAAACCACCTGCGGTGCGGCCCTGAc < 2:4684386/93‑1 (MQ=255)
gcgGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACaa < 2:1619469/93‑1 (MQ=255)
cgGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAAt < 2:6035609/93‑1 (MQ=255)
ggTGTTGCCAGTCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATc < 1:4142613/93‑1 (MQ=255)
gtgtTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACAACCTGCGGTGCGGCACTGACAATCa > 1:1166979/1‑93 (MQ=255)
ggtTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCAt < 1:4445722/92‑1 (MQ=255)
gtTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATa < 2:64098/93‑1 (MQ=255)
gtTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATa < 1:5405041/93‑1 (MQ=255)
ttGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAg > 1:387069/1‑93 (MQ=255)
ttGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAg > 1:4606425/1‑93 (MQ=255)
gCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTc > 1:351377/1‑93 (MQ=255)
ccAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCt > 1:5061928/1‑93 (MQ=255)
aGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGt < 1:1266736/93‑1 (MQ=255)
aGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGt > 2:2782624/1‑93 (MQ=255)
ggCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGGATCCAGTTCTGAAACCACCTGCGGTGCGTCACTGACAATCATAGTCTGtt > 1:2756223/1‑93 (MQ=255)
gcgcGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTtc > 2:7330849/1‑93 (MQ=255)
gcgcGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTtc < 1:2235928/93‑1 (MQ=255)
gcgcGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTtc < 1:6965874/93‑1 (MQ=255)
cgcgTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTtca < 1:5984634/93‑1 (MQ=255)
|
TCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCACGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCATCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCA > NC_000913/1520836‑1521015
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCACGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCATCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCAG > NC_000913/1520833‑1521019
|
AAATCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCG < SRR4302541.2038683/94‑1 (MQ=60)
AATCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGT < SRR4302541.4623066/94‑1 (MQ=60)
AATCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGT > SRR4302541.6823074/1‑94 (MQ=60)
ATCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTC > SRR4302541.4805123/1‑94 (MQ=60)
ATCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTC < SRR4302541.7598499/94‑1 (MQ=60)
TCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCT < SRR4302541.3248632/94‑1 (MQ=60)
TCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCT < SRR4302541.1011890/94‑1 (MQ=60)
CTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTC > SRR4302541.2280238/1‑94 (MQ=60)
CTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTC > SRR4302541.3825675/1‑94 (MQ=60)
CTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTC > SRR4302541.307633/1‑94 (MQ=60)
TTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGGTTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCC > SRR4302541.3351988/1‑94 (MQ=60)
TTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCC < SRR4302541.6402327/94‑1 (MQ=60)
TTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCC < SRR4302541.1856237/94‑1 (MQ=60)
TGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCT < SRR4302541.5353707/94‑1 (MQ=60)
GCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTC < SRR4302541.1122570/94‑1 (MQ=60)
GCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTC < SRR4302541.3025229/94‑1 (MQ=60)
GCGCATAGTCGTGCCTGTTTTGTACCTGCAACCCAGGCGCGACGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTC < SRR4302541.8204111/94‑1 (MQ=60)
CGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCG > SRR4302541.415408/1‑94 (MQ=60)
CGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCG > SRR4302541.4124865/1‑94 (MQ=60)
CGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCG > SRR4302541.594020/1‑94 (MQ=60)
CGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCG > SRR4302541.6410639/1‑94 (MQ=60)
ATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCA > SRR4302541.627846/1‑94 (MQ=60)
ATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCA > SRR4302541.4513565/1‑94 (MQ=60)
ATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCA > SRR4302541.2385350/1‑94 (MQ=60)
TAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCAT > SRR4302541.4240895/1‑94 (MQ=60)
GTTCTGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCC > SRR4302541.6484844/1‑94 (MQ=60)
TTCTGCCGGTTTTGTACCTGCAAACCAGGCACGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCATCTCCTCGCCATCCA > SRR4302541.1502597/1‑94 (MQ=60)
TGCTGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCA < SRR4302541.531589/94‑1 (MQ=60)
TGCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCA > SRR4302541.574142/1‑94 (MQ=60)
GCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCAC > SRR4302541.6003294/1‑94 (MQ=60)
GCCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCAC > SRR4302541.6002034/1‑94 (MQ=60)
CCGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACG > SRR4302541.1599129/1‑94 (MQ=60)
CGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGC > SRR4302541.6503803/1‑94 (MQ=60)
CGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGC > SRR4302541.5620423/1‑94 (MQ=60)
CGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGC > SRR4302541.1221475/1‑94 (MQ=60)
CGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGC > SRR4302541.6974649/1‑94 (MQ=60)
CGGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGC > SRR4302541.5439364/1‑94 (MQ=60)
GGTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCT > SRR4302541.1015400/1‑94 (MQ=60)
GTTTTGTGCCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCGCGCTT < SRR4302541.6538767/94‑1 (MQ=60)
GTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGGTT > SRR4302541.3236496/1‑94 (MQ=60)
GTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTT < SRR4302541.7338645/94‑1 (MQ=60)
GTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTT < SRR4302541.6538768/94‑1 (MQ=60)
GTTTTGTACCTGCAAACCAGGCGCGCCGGTCAGAGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTA > SRR4302541.4070913/1‑94 (MQ=60)
TTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTAC > SRR4302541.8653562/1‑94 (MQ=60)
TTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTAC > SRR4302541.4845562/1‑94 (MQ=60)
TTTGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTAC > SRR4302541.8050453/1‑94 (MQ=60)
TTGTGCCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACT < SRR4302541.4616572/94‑1 (MQ=60)
TGTCCCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTG < SRR4302541.8171325/94‑1 (MQ=60)
TGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTG < SRR4302541.8302968/94‑1 (MQ=60)
TGTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTG > SRR4302541.5104006/1‑94 (MQ=60)
GTACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGC > SRR4302541.4181943/1‑94 (MQ=60)
TACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCT > SRR4302541.7039802/1‑94 (MQ=60)
ACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTG > SRR4302541.5835080/1‑94 (MQ=60)
ACCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTG > SRR4302541.2035855/1‑94 (MQ=60)
CCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGC > SRR4302541.1013700/1‑94 (MQ=60)
CCTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGC > SRR4302541.2221301/1‑94 (MQ=60)
CTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCT < SRR4302541.8652012/94‑1 (MQ=60)
CTGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCT > SRR4302541.1566805/1‑94 (MQ=60)
TGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTG < SRR4302541.4716374/94‑1 (MQ=60)
TGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTG > SRR4302541.7026385/1‑94 (MQ=60)
TGCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTG < SRR4302541.4103970/94‑1 (MQ=60)
GCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGG > SRR4302541.3745348/1‑94 (MQ=60)
GCAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGG > SRR4302541.5712094/1‑94 (MQ=60)
CAAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGG < SRR4302541.4547426/94‑1 (MQ=60)
AAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGG > SRR4302541.861729/1‑94 (MQ=60)
AAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGG > SRR4302541.861728/1‑94 (MQ=60)
AAACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGG > SRR4302541.1450458/1‑94 (MQ=60)
AACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGT < SRR4302541.366930/94‑1 (MQ=60)
AACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGT > SRR4302541.4515015/1‑94 (MQ=60)
ACTAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTA > SRR4302541.2047917/1‑94 (MQ=60)
ACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTT > SRR4302541.2033468/1‑94 (MQ=60)
ACCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTA < SRR4302541.1067888/94‑1 (MQ=60)
CCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTAT < SRR4302541.664481/94‑1 (MQ=60)
CCAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTAT > SRR4302541.3233481/1‑94 (MQ=60)
CAGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATC < SRR4302541.7905529/94‑1 (MQ=60)
AGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCC > SRR4302541.1832126/1‑94 (MQ=60)
AGGCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCC > SRR4302541.8607472/1‑94 (MQ=60)
GCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAG < SRR4302541.574026/94‑1 (MQ=60)
GCGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAG > SRR4302541.7245230/1‑94 (MQ=60)
CGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGT < SRR4302541.2288036/94‑1 (MQ=60)
CGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGT < SRR4302541.3375336/94‑1 (MQ=60)
CGCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGT > SRR4302541.3439036/1‑94 (MQ=60)
GCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTT > SRR4302541.2845375/1‑94 (MQ=60)
GCGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTT < SRR4302541.3983450/94‑1 (MQ=60)
CGCCGGTCAGTGATTCGGACAAGTTAATGCTCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTC > SRR4302541.5092632/1‑94 (MQ=60)
CGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTC < SRR4302541.8483615/94‑1 (MQ=60)
CCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTG > SRR4302541.3829567/1‑94 (MQ=60)
CCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTG > SRR4302541.3498977/1‑94 (MQ=60)
CGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGA > SRR4302541.1123313/1‑94 (MQ=60)
CGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGA > SRR4302541.1626887/1‑94 (MQ=60)
GGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAA < SRR4302541.456267/94‑1 (MQ=60)
TCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAAC > SRR4302541.8066296/1‑94 (MQ=60)
AGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCA < SRR4302541.6590255/94‑1 (MQ=60)
AGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCA > SRR4302541.8500949/1‑94 (MQ=60)
GATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCT > SRR4302541.8192083/1‑94 (MQ=60)
ATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTG > SRR4302541.3968846/1‑94 (MQ=60)
TTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGC < SRR4302541.8233139/94‑1 (MQ=60)
CGGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGG > SRR4302541.6576746/1‑94 (MQ=60)
GGACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGT < SRR4302541.3526669/94‑1 (MQ=60)
GACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTG > SRR4302541.8753417/1‑94 (MQ=60)
ACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGC < SRR4302541.4442943/94‑1 (MQ=60)
ACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGC > SRR4302541.7736213/1‑94 (MQ=60)
ACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGC < SRR4302541.2510268/94‑1 (MQ=60)
ACAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGC < SRR4302541.7074905/94‑1 (MQ=60)
CAAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCG < SRR4302541.4092391/94‑1 (MQ=60)
CAAGTTAATGCGCGGTGATGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCG < SRR4302541.7922685/94‑1 (MQ=60)
AAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGG < SRR4302541.4439051/94‑1 (MQ=60)
AAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGG < SRR4302541.837661/94‑1 (MQ=60)
AAGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGG < SRR4302541.5041284/94‑1 (MQ=60)
AGTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGC < SRR4302541.245632/94‑1 (MQ=60)
AGTTAATGCGCGGTGTTGCCAGGCACGTCTCCTGGCCATCCACCACGCTTACTGCTGCTGGGGTAGCCAGTTCTGAAACCACCTGCGGTGCGGC < SRR4302541.4301634/94‑1 (MQ=60)
GTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCA < SRR4302541.3638792/94‑1 (MQ=60)
GTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCA < SRR4302541.6918213/94‑1 (MQ=60)
GTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCA > SRR4302541.7551424/1‑94 (MQ=60)
GTTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCA < SRR4302541.5243522/94‑1 (MQ=60)
TTAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCAC < SRR4302541.311102/94‑1 (MQ=60)
TAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACT < SRR4302541.6676950/94‑1 (MQ=60)
TAATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACT < SRR4302541.7616156/94‑1 (MQ=60)
ATGCGCGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGA < SRR4302541.4696552/94‑1 (MQ=60)
CGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATC > SRR4302541.5288007/1‑94 (MQ=60)
CGGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATC > SRR4302541.3887998/1‑94 (MQ=60)
GGTGTTGCCAGTCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCA < SRR4302541.4183554/94‑1 (MQ=60)
GGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCA > SRR4302541.1178198/1‑94 (MQ=60)
GGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCA > SRR4302541.4299850/1‑94 (MQ=60)
GGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCA < SRR4302541.7554547/94‑1 (MQ=60)
GGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCA > SRR4302541.5942405/1‑94 (MQ=60)
GGTGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACAACCTGCGGTGCGGCACTGACAATCA > SRR4302541.1178197/1‑94 (MQ=60)
GTGTTGCCAGGCGCGTCGCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCAT < SRR4302541.4748848/94‑1 (MQ=60)
GGTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATA < SRR4302541.4490431/94‑1 (MQ=60)
GTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAG > SRR4302541.390643/1‑94 (MQ=60)
GTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAG > SRR4302541.468076/1‑94 (MQ=60)
GTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAG > SRR4302541.1398942/1‑94 (MQ=60)
GTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAG > SRR4302541.4653193/1‑94 (MQ=60)
GTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAG < SRR4302541.1704031/94‑1 (MQ=60)
GTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAG < SRR4302541.5460503/94‑1 (MQ=60)
GTTGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAG < SRR4302541.5823870/94‑1 (MQ=60)
TGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTC < SRR4302541.6446475/94‑1 (MQ=60)
TGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTC < SRR4302541.365351/94‑1 (MQ=60)
TGCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTC > SRR4302541.354537/1‑94 (MQ=60)
GCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCT < SRR4302541.824773/94‑1 (MQ=60)
GCCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCT > SRR4302541.5113982/1‑94 (MQ=60)
CCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTG < SRR4302541.132679/94‑1 (MQ=60)
CCAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTG < SRR4302541.1527343/94‑1 (MQ=60)
CAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGT > SRR4302541.6783923/1‑94 (MQ=60)
CAGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGT > SRR4302541.3426082/1‑94 (MQ=60)
CAGGCGCGTCTCCTAGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGT > SRR4302541.7481198/1‑94 (MQ=60)
AGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTT > SRR4302541.4102318/1‑94 (MQ=60)
AGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTT < SRR4302541.1279335/94‑1 (MQ=60)
AGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTT > SRR4302541.2783914/1‑94 (MQ=60)
AGGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGGATCCAGTTCTGAAACCACCTGCGGTGCGTCACTGACAATCATAGTCTGTT > SRR4302541.2783913/1‑94 (MQ=60)
GGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTC > SRR4302541.2687230/1‑94 (MQ=60)
GGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTC > SRR4302541.6087186/1‑94 (MQ=60)
GGCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTC > SRR4302541.7227063/1‑94 (MQ=60)
GCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCA < SRR4302541.7040121/94‑1 (MQ=60)
GCGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCA < SRR4302541.2257579/94‑1 (MQ=60)
CGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCAT < SRR4302541.368330/94‑1 (MQ=60)
CGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCAT < SRR4302541.6045893/94‑1 (MQ=60)
CGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCAT > SRR4302541.4117424/1‑94 (MQ=60)
CGCGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCAT < SRR4302541.6045892/94‑1 (MQ=60)
CGTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCA < SRR4302541.7972458/94‑1 (MQ=60)
GTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCAG > SRR4302541.1924036/1‑94 (MQ=60)
GTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCAG > SRR4302541.3314744/1‑94 (MQ=60)
GTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCAG > SRR4302541.205886/1‑94 (MQ=60)
GTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCAG > SRR4302541.7331561/1‑94 (MQ=60)
GTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCAG > SRR4302541.2862628/1‑94 (MQ=60)
GTCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCAG < SRR4302541.107495/94‑1 (MQ=60)
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AAATCTTGCGCATAGTTCTGCCGGTTTTGTACCTGCAAACCAGGCACGCCGGTCAGTGATTCGGACAAGTTAATGCGCGGTGTTGCCAGGCGCATCTCCTCGCCATCCACCACGCTTACTGCTGCTGGGGTATCCAGTTCTGAAACCACCTGCGGTGCGGCACTGACAATCATAGTCTGTTCATCAG > NC_000913/1520833‑1521019
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
