Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,521,583 A→T I85F (ATC→TTC)  b1452 → putative receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,521,5830AT99.1% 1122.6 / 0.6 324I85F (ATC→TTC) b1452putative receptor
Reads supporting (aligned to +/- strand):  ref base A (1/2);  new base T (173/148);  total (174/150)
Fisher's exact test for biased strand distribution p-value = 5.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.40e-01

Only 100 of 346 total aligned reads displayed.

CTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACG  >  NC_000913/1521493‑1521672
                                                                                          |                                                                                         
cTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTc                                                                                         >  2:796247/1‑93 (MQ=255)
cTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTc                                                                                         >  2:8120426/1‑93 (MQ=255)
cTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGGTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTc                                                                                         >  1:1787660/1‑93 (MQ=255)
 tgtgGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTcc                                                                                        <  1:1108778/93‑1 (MQ=255)
  gtgGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCa                                                                                       >  2:3210347/1‑93 (MQ=255)
  gtgGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGAAGCAGGCGTTCCa                                                                                       >  2:8697522/1‑93 (MQ=255)
  ggggCTCGCCACTTCGCAAAGCCGCAAACCGGAGAAAGGTGGCGTGGGGTATCGGCTTGTTCCGTGCACTCCGGAAGGGACGCAGGCGGTCCa                                                                                       >  1:7824032/3‑93 (MQ=255)
   tgGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCAt                                                                                      <  2:7759452/93‑1 (MQ=255)
    ggCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATa                                                                                     <  1:7068142/93‑1 (MQ=255)
    ggCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATa                                                                                     >  1:6508595/1‑93 (MQ=255)
     gCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATaa                                                                                    <  1:5265165/93‑1 (MQ=255)
        cGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGa                                                                                 >  1:1366958/1‑93 (MQ=255)
         gCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAt                                                                                <  1:5685268/93‑1 (MQ=255)
          ccACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAtc                                                                               >  1:664144/1‑93 (MQ=255)
          ccACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAtc                                                                               <  1:230548/93‑1 (MQ=255)
           cACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAtct                                                                              >  1:1886831/1‑93 (MQ=255)
           cACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAtct                                                                              >  2:8786418/1‑93 (MQ=255)
            aCTTCGCAAAGCCGCAAACTGGATAAGGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAtctc                                                                             <  2:5382484/93‑1 (MQ=255)
            aCTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAtctc                                                                             <  2:2998664/93‑1 (MQ=255)
            aCTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAtctc                                                                             >  1:6286860/1‑93 (MQ=255)
             cTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTTCATAACAAtccaa                                                                            >  1:2327651/1‑90 (MQ=255)
              ttCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCaa                                                                           <  2:2346773/93‑1 (MQ=255)
               tCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAg                                                                          <  2:6234309/93‑1 (MQ=255)
                cGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGc                                                                         >  2:7211923/1‑93 (MQ=255)
                 gCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGcc                                                                        >  1:8143626/1‑93 (MQ=255)
                  cAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCg                                                                       >  2:289987/1‑93 (MQ=255)
                  cAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCg                                                                       >  1:3707435/1‑93 (MQ=255)
                   aaaGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGt                                                                      >  2:5649287/1‑93 (MQ=255)
                    aaGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGtt                                                                     <  2:3377202/93‑1 (MQ=255)
                    aaGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGtt                                                                     <  1:8011763/93‑1 (MQ=255)
                    aaGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGtt                                                                     >  2:2313956/1‑93 (MQ=255)
                    aaGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGtt                                                                     >  2:6939059/1‑93 (MQ=255)
                     aGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGttt                                                                    <  2:475732/93‑1 (MQ=255)
                      gCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTg                                                                   <  1:4051161/93‑1 (MQ=255)
                      gCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTg                                                                   <  1:8371827/93‑1 (MQ=255)
                      gCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTg                                                                   <  1:3314781/93‑1 (MQ=255)
                       ccGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTgg                                                                  <  1:8612208/93‑1 (MQ=255)
                           aaaCTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGcc                                                              <  2:3796974/93‑1 (MQ=255)
                            aaCTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGcca                                                             >  2:3957047/1‑93 (MQ=255)
                             aCTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGccac                                                            <  1:5522242/93‑1 (MQ=255)
                              cTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGccacc                                                           <  1:5926129/93‑1 (MQ=255)
                              cTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGccacc                                                           <  1:4269714/93‑1 (MQ=255)
                               tGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTTGTGccacca                                                          >  1:4621703/1‑93 (MQ=255)
                               tGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGccacca                                                          >  1:262109/1‑93 (MQ=255)
                               tGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGccacca                                                          <  1:443417/93‑1 (MQ=255)
                                 gATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATc                                                        >  2:8296469/1‑93 (MQ=255)
                                 gATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATc                                                        >  2:449785/1‑93 (MQ=255)
                                   tAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCaa                                                      <  2:5033552/93‑1 (MQ=255)
                                   tAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCaa                                                      <  1:3198768/93‑1 (MQ=255)
                                      aGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATaa                                                   >  2:1881801/1‑93 (MQ=255)
                                       ggTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATTAATAac                                                  >  2:6689582/1‑93 (MQ=255)
                                           gCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGa                                              <  1:691278/93‑1 (MQ=255)
                                               ggTTTATCGTCTTGATCCGGTCTCTCTGGAAGTGACGCAGGCGTACCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCa                                          <  2:7860944/93‑1 (MQ=255)
                                               ggTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCa                                          >  1:5800168/1‑93 (MQ=255)
                                                gTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAg                                         >  1:2728106/1‑93 (MQ=255)
                                                 tttATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGa                                        <  1:1588163/93‑1 (MQ=255)
                                                    aTCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGt                                     <  1:3741590/93‑1 (MQ=255)
                                                    aTCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGt                                     >  2:6469634/1‑93 (MQ=255)
                                                     tCGTCTTGATCCGCTCACTCTGGAAGTGACTGAGGCGTGCCATAACGATCTCAAGCCGCTTCGTGCCACCATCAATAACACGACTCAGACGtt                                    >  2:4236508/1‑93 (MQ=255)
                                                        tCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTtgtg                                 >  2:1591668/1‑93 (MQ=255)
                                                        tCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTtgtg                                 >  2:89088/1‑93 (MQ=255)
                                                          ttGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGt                               >  1:2870233/1‑93 (MQ=255)
                                                           tGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGtt                              <  2:5557918/93‑1 (MQ=255)
                                                            gATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGttt                             >  2:2051783/1‑93 (MQ=255)
                                                            gATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGttt                             >  2:7299152/1‑93 (MQ=255)
                                                             aTCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTg                            >  1:3420302/1‑93 (MQ=255)
                                                                 ggTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTaa                        <  2:6115877/93‑1 (MQ=255)
                                                                 ggTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTaa                        >  2:4328239/1‑93 (MQ=255)
                                                                  gTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTaaa                       >  2:408259/1‑92 (MQ=255)
                                                                   tCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAaca                      >  2:3529623/1‑93 (MQ=255)
                                                                   tCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAaca                      >  1:6090931/1‑93 (MQ=255)
                                                                    taCTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAacac                     <  1:7207313/92‑1 (MQ=255)
                                                                     aCTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACAcc                    >  1:3283046/1‑93 (MQ=255)
                                                                      ctctGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCg                   <  2:1437795/93‑1 (MQ=255)
                                                                      ctctGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCg                   >  2:2689087/1‑93 (MQ=255)
                                                                       tctGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGt                  <  2:1176411/93‑1 (MQ=255)
                                                                       tctGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGt                  >  2:3295991/1‑93 (MQ=255)
                                                                         tGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTaa                <  1:4211220/93‑1 (MQ=255)
                                                                         cggAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTaa                >  2:4070864/2‑93 (MQ=255)
                                                                          ggAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAAACGTTGTGGTTTGGTAACACCGTaaa               >  1:7479849/1‑93 (MQ=255)
                                                                           gAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAAc              <  2:26263/93‑1 (MQ=255)
                                                                           gAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAAc              <  1:965261/93‑1 (MQ=255)
                                                                           gAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAAc              <  1:2085189/93‑1 (MQ=255)
                                                                            aaGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACa             <  1:825974/93‑1 (MQ=255)
                                                                            aaGTGACGCAGCCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACa             <  1:8824547/93‑1 (MQ=255)
                                                                             aGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAg            <  1:3077875/93‑1 (MQ=255)
                                                                              gTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAgc           <  2:7511305/93‑1 (MQ=255)
                                                                              gTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAgc           >  1:1036218/1‑93 (MQ=255)
                                                                              gTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAgc           <  2:6832254/93‑1 (MQ=255)
                                                                               agACGCAGGCGTTCCATAACGATCTCAAGCCGTTCGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAgcg          <  1:4808794/92‑1 (MQ=255)
                                                                                gACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAgcgc         >  2:715640/1‑93 (MQ=255)
                                                                                    cAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCCCCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTc     <  2:494061/93‑1 (MQ=255)
                                                                                    cAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTc     >  1:7354302/1‑93 (MQ=255)
                                                                                    cAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTc     <  1:1168102/93‑1 (MQ=255)
                                                                                     aGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCa    >  2:1388595/1‑93 (MQ=255)
                                                                                      ggCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCAc   <  1:391452/93‑1 (MQ=255)
                                                                                      ggCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCAc   >  2:6346428/1‑93 (MQ=255)
                                                                                      ggCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCAc   >  1:2131075/1‑93 (MQ=255)
                                                                                      ggCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGCTTGGTAACACCGTAAACAGCGCGGTCAc   >  2:5908414/1‑93 (MQ=255)
                                                                                       gCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACg  <  2:1278098/93‑1 (MQ=255)
                                                                                          |                                                                                         
CTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACG  >  NC_000913/1521493‑1521672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGCGA  >  NC_000913/1521492‑1521676
                                                                                           |                                                                                             
GCTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTC                                                                                             <  SRR4302541.4299824/94‑1 (MQ=60)
GCTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGGTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTC                                                                                             >  SRR4302541.1805026/1‑94 (MQ=60)
 CTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCC                                                                                            <  SRR4302541.1075442/94‑1 (MQ=60)
 CTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCC                                                                                            >  SRR4302541.4834381/1‑94 (MQ=60)
 CTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCC                                                                                            <  SRR4302541.7309142/94‑1 (MQ=60)
  TGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCA                                                                                           <  SRR4302541.1119190/94‑1 (MQ=60)
  TGGGGCTCGCCACTTCGCAAAGCCGCAAACCGGAGAAAGGTGGCGTGGGGTATCGGCTTGTTCCGTGCACTCCGGAAGGGACGCAGGCGGTCCA                                                                                           >  SRR4302541.7908991/1‑94 (MQ=26)
   GTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCAT                                                                                          >  SRR4302541.6896102/1‑94 (MQ=60)
    TGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATA                                                                                         >  SRR4302541.6574991/1‑94 (MQ=60)
    TGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATA                                                                                         <  SRR4302541.3114805/94‑1 (MQ=60)
     GGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAA                                                                                        <  SRR4302541.1289145/94‑1 (MQ=60)
     GGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAA                                                                                        <  SRR4302541.7143309/94‑1 (MQ=60)
      GCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAAC                                                                                       <  SRR4302541.5319422/94‑1 (MQ=60)
        TCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGA                                                                                     >  SRR4302541.1380418/1‑94 (MQ=60)
         CGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAT                                                                                    >  SRR4302541.916486/1‑94 (MQ=60)
         CGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAT                                                                                    >  SRR4302541.5751183/1‑94 (MQ=60)
         CGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAT                                                                                    >  SRR4302541.7510409/1‑94 (MQ=60)
         CGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAT                                                                                    <  SRR4302541.3969590/94‑1 (MQ=60)
         CGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGAT                                                                                    <  SRR4302541.3969591/94‑1 (MQ=60)
          GCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATC                                                                                   >  SRR4302541.670398/1‑94 (MQ=60)
          GCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATC                                                                                   <  SRR4302541.5743275/94‑1 (MQ=60)
           CCACTTCGCAAAGCCGCAAGCTGGATAATGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCT                                                                                  <  SRR4302541.7882540/94‑1 (MQ=60)
           CCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCT                                                                                  <  SRR4302541.232339/94‑1 (MQ=60)
           CCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCT                                                                                  >  SRR4302541.1904953/1‑94 (MQ=60)
           CCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCT                                                                                  >  SRR4302541.7530268/1‑94 (MQ=60)
            CACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTC                                                                                 >  SRR4302541.3285911/1‑94 (MQ=60)
            CACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTC                                                                                 <  SRR4302541.3401624/94‑1 (MQ=60)
            CACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTC                                                                                 >  SRR4302541.6351081/1‑94 (MQ=60)
             ACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCA                                                                                >  SRR4302541.5784519/1‑94 (MQ=60)
             ACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCA                                                                                >  SRR4302541.5917182/1‑94 (MQ=60)
             ACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCA                                                                                <  SRR4302541.1241278/94‑1 (MQ=60)
             ACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGGGACGCAGGCGTTCCATAACGATCTAA                                                                                >  SRR4302541.2350240/1‑94 (MQ=60)
              CTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAA                                                                               <  SRR4302541.2233022/94‑1 (MQ=60)
               TTCGCAAAGCTGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAG                                                                              <  SRR4302541.737965/94‑1 (MQ=60)
               TTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAG                                                                              <  SRR4302541.271700/94‑1 (MQ=60)
               TTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAG                                                                              <  SRR4302541.4355681/94‑1 (MQ=60)
                 CGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCC                                                                            >  SRR4302541.4171162/1‑94 (MQ=60)
                 CGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCC                                                                            >  SRR4302541.8232702/1‑94 (MQ=60)
                 CGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCC                                                                            <  SRR4302541.8391364/94‑1 (MQ=60)
                  GCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCG                                                                           >  SRR4302541.3744862/1‑94 (MQ=60)
                  GCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCG                                                                           >  SRR4302541.1168574/1‑94 (MQ=60)
                   CAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGT                                                                          >  SRR4302541.4842028/1‑94 (MQ=60)
                   CAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCAATAACGATCTCAAGACGT                                                                          >  SRR4302541.4298207/1‑94 (MQ=60)
                   CAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTATTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGT                                                                          >  SRR4302541.2341603/1‑94 (MQ=60)
                     AAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTT                                                                        <  SRR4302541.8099871/94‑1 (MQ=60)
                     AAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTT                                                                        >  SRR4302541.3017754/1‑94 (MQ=60)
                     AAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTT                                                                        <  SRR4302541.8667280/94‑1 (MQ=60)
                     AAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTT                                                                        >  SRR4302541.739149/1‑94 (MQ=60)
                      AGCCGCAAACTGGATAAAGGTGGCGTGGTTTTTCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTG                                                                       <  SRR4302541.6359645/94‑1 (MQ=60)
                      AGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTG                                                                       <  SRR4302541.6359646/94‑1 (MQ=60)
                       GCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGG                                                                      <  SRR4302541.3348048/94‑1 (MQ=60)
                       GCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGG                                                                      <  SRR4302541.1657564/94‑1 (MQ=60)
                       GCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGG                                                                      <  SRR4302541.4091138/94‑1 (MQ=60)
                       GCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGG                                                                      <  SRR4302541.8462560/94‑1 (MQ=60)
                        CCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGT                                                                     >  SRR4302541.7919706/1‑94 (MQ=60)
                        CCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGT                                                                     <  SRR4302541.7053831/94‑1 (MQ=60)
                        CCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGT                                                                     <  SRR4302541.4013471/94‑1 (MQ=60)
                        CCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGT                                                                     <  SRR4302541.8704558/94‑1 (MQ=60)
                         CGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTG                                                                    >  SRR4302541.5335958/1‑94 (MQ=60)
                         CGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTG                                                                    >  SRR4302541.5335959/1‑94 (MQ=60)
                           CAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCC                                                                  >  SRR4302541.3301927/1‑94 (MQ=60)
                           CAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCC                                                                  <  SRR4302541.8337056/94‑1 (MQ=60)
                             AACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCAC                                                                <  SRR4302541.6801331/94‑1 (MQ=60)
                              ACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACC                                                               <  SRR4302541.5578765/94‑1 (MQ=60)
                               CTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTTGTGCCACCA                                                              >  SRR4302541.4668689/1‑94 (MQ=60)
                               CTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCG                                                              >  SRR4302541.5398240/1‑94 (MQ=60)
                               CTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCA                                                              <  SRR4302541.5986480/94‑1 (MQ=60)
                               CTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCA                                                              >  SRR4302541.264246/1‑94 (MQ=60)
                               CTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCA                                                              <  SRR4302541.4312380/94‑1 (MQ=60)
                                TGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCAT                                                             <  SRR4302541.447590/94‑1 (MQ=60)
                                TGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCAT                                                             <  SRR4302541.830626/94‑1 (MQ=60)
                                TGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCAT                                                             >  SRR4302541.3937990/1‑94 (MQ=60)
                                TGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCAT                                                             <  SRR4302541.933032/94‑1 (MQ=60)
                                 GGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATC                                                            >  SRR4302541.1152038/1‑94 (MQ=60)
                                 GGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGAGTTCCATAACGATCTCAAGCCGTTTGGGGCCACCATA                                                            >  SRR4302541.2136968/1‑94 (MQ=60)
                                  GATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCA                                                           <  SRR4302541.3763503/94‑1 (MQ=60)
                                    TAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAAT                                                         <  SRR4302541.234679/94‑1 (MQ=60)
                                    TAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAAT                                                         >  SRR4302541.6602258/1‑94 (MQ=60)
                                    TAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAAT                                                         <  SRR4302541.3231087/94‑1 (MQ=60)
                                     AAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATA                                                        <  SRR4302541.6232641/94‑1 (MQ=60)
                                     AAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATA                                                        >  SRR4302541.709742/1‑94 (MQ=60)
                                       AGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAAC                                                      >  SRR4302541.5651545/1‑94 (MQ=60)
                                       AGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAAC                                                      <  SRR4302541.6592508/94‑1 (MQ=60)
                                        agtgtCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACA                                                     <  SRR4302541.4260223/89‑1 (MQ=60)
                                         GTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAAacc                                                    >  SRR4302541.1882354/1‑91 (MQ=60)
                                          TGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACG                                                   <  SRR4302541.3466312/94‑1 (MQ=60)
                                          TGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACG                                                   <  SRR4302541.686421/94‑1 (MQ=60)
                                            GCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGAC                                                 <  SRR4302541.697789/94‑1 (MQ=60)
                                            GCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGAC                                                 <  SRR4302541.1304335/94‑1 (MQ=60)
                                             CGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACT                                                >  SRR4302541.8128472/1‑94 (MQ=60)
                                             CGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACT                                                <  SRR4302541.1690512/94‑1 (MQ=60)
                                             CGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACT                                                >  SRR4302541.1492229/1‑94 (MQ=60)
                                               TGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCA                                              >  SRR4302541.5859080/1‑94 (MQ=60)
                                               TGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCA                                              <  SRR4302541.3325396/94‑1 (MQ=60)
                                               TGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCA                                              <  SRR4302541.3319357/94‑1 (MQ=60)
                                                GGTTTATCGTCTTGTTCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAG                                             >  SRR4302541.7269866/1‑94 (MQ=60)
                                                GGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAG                                             >  SRR4302541.3781348/1‑94 (MQ=60)
                                                GGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAG                                             >  SRR4302541.2755394/1‑94 (MQ=60)
                                                GGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAG                                             >  SRR4302541.2048527/1‑94 (MQ=60)
                                                GGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAG                                             >  SRR4302541.8670218/1‑94 (MQ=60)
                                                GGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAG                                             <  SRR4302541.6516648/94‑1 (MQ=60)
                                                  TTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGAC                                           <  SRR4302541.1603988/94‑1 (MQ=60)
                                                  TTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGAC                                           <  SRR4302541.8820667/94‑1 (MQ=60)
                                                   TTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACG                                          <  SRR4302541.2853693/94‑1 (MQ=60)
                                                   TTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACG                                          >  SRR4302541.8154686/1‑94 (MQ=60)
                                                    TATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGT                                         >  SRR4302541.2942595/1‑94 (MQ=60)
                                                    TATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGT                                         >  SRR4302541.8435533/1‑94 (MQ=60)
                                                     ATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTT                                        <  SRR4302541.3779245/94‑1 (MQ=60)
                                                       CGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGT                                      >  SRR4302541.375292/1‑94 (MQ=60)
                                                         TCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGG                                    <  SRR4302541.8904050/94‑1 (MQ=60)
                                                         TCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGG                                    >  SRR4302541.1059090/1‑94 (MQ=60)
                                                         TCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGG                                    <  SRR4302541.4875972/94‑1 (MQ=60)
                                                          CTTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGT                                   >  SRR4302541.2899055/1‑94 (MQ=60)
                                                           TTGATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTT                                  >  SRR4302541.5593311/1‑94 (MQ=60)
                                                            TGATCCGGTCCCTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTT                                 <  SRR4302541.2811023/94‑1 (MQ=60)
                                                             GATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTG                                >  SRR4302541.8462465/1‑94 (MQ=60)
                                                             GATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTG                                <  SRR4302541.1424738/94‑1 (MQ=60)
                                                             GATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTG                                >  SRR4302541.3454448/1‑94 (MQ=60)
                                                              ATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGG                               >  SRR4302541.1818965/1‑94 (MQ=60)
                                                              ATCCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGG                               >  SRR4302541.5304070/1‑94 (MQ=60)
                                                                CCGGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTA                             <  SRR4302541.2940970/94‑1 (MQ=60)
                                                                 CGGTCACTCTGGAAGTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAA                            <  SRR4302541.983818/94‑1 (MQ=60)
                                                                  GGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAAC                           >  SRR4302541.8841980/1‑94 (MQ=60)
                                                                  GGTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAAC                           >  SRR4302541.2024278/1‑94 (MQ=60)
                                                                   GTCACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACA                          >  SRR4302541.6153103/1‑94 (MQ=60)
                                                                    TCCCTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACAC                         <  SRR4302541.4813594/94‑1 (MQ=60)
                                                                     TACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACC                        <  SRR4302541.7284193/94‑1 (MQ=60)
                                                                     CACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACC                        >  SRR4302541.3316133/1‑94 (MQ=60)
                                                                      ACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCG                       >  SRR4302541.458068/1‑94 (MQ=60)
                                                                      ACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCG                       >  SRR4302541.448568/1‑94 (MQ=60)
                                                                      ACTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCG                       <  SRR4302541.7180409/94‑1 (MQ=60)
                                                                       CTCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGT                      >  SRR4302541.5856382/1‑94 (MQ=60)
                                                                        TCTGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTA                     >  SRR4302541.4287005/1‑94 (MQ=60)
                                                                          TGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAA                   >  SRR4302541.1667898/1‑94 (MQ=60)
                                                                          TGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAA                   <  SRR4302541.3164376/94‑1 (MQ=60)
                                                                          TGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAA                   <  SRR4302541.4253109/94‑1 (MQ=60)
                                                                          TGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAA                   <  SRR4302541.2648730/94‑1 (MQ=60)
                                                                          TGGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAAACGTTGTGGTTTGGTAACACCGTAAA                   >  SRR4302541.7559863/1‑94 (MQ=60)
                                                                           GGAAGTGCCGCAGGCGTTCCATAACGAGCTCCAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAAC                  <  SRR4302541.2477768/94‑1 (MQ=60)
                                                                           GGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAAC                  <  SRR4302541.210824/94‑1 (MQ=60)
                                                                           GGAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAAC                  <  SRR4302541.1934539/94‑1 (MQ=60)
                                                                            GAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACA                 <  SRR4302541.974335/94‑1 (MQ=60)
                                                                            GAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACA                 <  SRR4302541.5925417/94‑1 (MQ=60)
                                                                            GAAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACA                 <  SRR4302541.2105380/94‑1 (MQ=60)
                                                                             AAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAG                <  SRR4302541.833491/94‑1 (MQ=60)
                                                                             AAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAG                <  SRR4302541.8083143/94‑1 (MQ=60)
                                                                             AAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAG                <  SRR4302541.330680/94‑1 (MQ=60)
                                                                             AAGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAG                <  SRR4302541.3749614/94‑1 (MQ=60)
                                                                             AAGTGACGCAGCCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAG                <  SRR4302541.8918711/94‑1 (MQ=60)
                                                                              AGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGC               >  SRR4302541.1045815/1‑94 (MQ=60)
                                                                              AGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGC               <  SRR4302541.2566692/94‑1 (MQ=60)
                                                                              AGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGC               >  SRR4302541.3398956/1‑94 (MQ=60)
                                                                              AGTGACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGC               <  SRR4302541.3109108/94‑1 (MQ=60)
                                                                                AGACGCAGGCGTTCCATAACGATCTCAAGCCGTTCGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGC             <  SRR4302541.4857837/94‑1 (MQ=60)
                                                                                 GACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCG            >  SRR4302541.4416036/1‑94 (MQ=60)
                                                                                  ACGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGG           >  SRR4302541.7663851/1‑94 (MQ=60)
                                                                                   CGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGT          <  SRR4302541.6027247/94‑1 (MQ=60)
                                                                                   CGCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGC          >  SRR4302541.3474502/1‑94 (MQ=60)
                                                                                    cgAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTC         <  SRR4302541.6201547/92‑1 (MQ=60)
                                                                                    GCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTC         >  SRR4302541.7432868/1‑94 (MQ=60)
                                                                                    GCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTC         >  SRR4302541.8223849/1‑94 (MQ=60)
                                                                                    GCAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTC         <  SRR4302541.7745193/94‑1 (MQ=60)
                                                                                     CAGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCA        <  SRR4302541.1179340/94‑1 (MQ=60)
                                                                                      AGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTaag       >  SRR4302541.2192186/1‑91 (MQ=60)
                                                                                      AGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCAG       >  SRR4302541.2192187/1‑94 (MQ=60)
                                                                                      AGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCAC       >  SRR4302541.3385628/1‑94 (MQ=60)
                                                                                      AGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCAC       <  SRR4302541.6066535/94‑1 (MQ=60)
                                                                                      AGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCAC       >  SRR4302541.4161095/1‑94 (MQ=60)
                                                                                      AGGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCAC       >  SRR4302541.2151682/1‑94 (MQ=60)
                                                                                       GGCGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACG      <  SRR4302541.395074/94‑1 (MQ=60)
                                                                                       GGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACG      <  SRR4302541.611210/94‑1 (MQ=60)
                                                                                         CGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGG    >  SRR4302541.2393116/1‑94 (MQ=60)
                                                                                         CGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGC    <  SRR4302541.8618478/94‑1 (MQ=60)
                                                                                         CGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGC    <  SRR4302541.1636359/94‑1 (MQ=60)
                                                                                         CGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGC    <  SRR4302541.1310793/94‑1 (MQ=60)
                                                                                         CGTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGC    <  SRR4302541.3288805/94‑1 (MQ=60)
                                                                                          GTTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGCG   >  SRR4302541.7878071/1‑94 (MQ=60)
                                                                                           TTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGCGA  >  SRR4302541.8411494/1‑94 (MQ=60)
                                                                                           TTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGCGA  >  SRR4302541.6452994/1‑94 (MQ=60)
                                                                                           TTCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGGCACGGCGA  >  SRR4302541.1957221/1‑94 (MQ=60)
                                                                                           |                                                                                             
GCTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGCGA  >  NC_000913/1521492‑1521676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑