Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,603,543 |
T→C |
F157L (TTT→CTT) |
b1516 → |
putative LACI‑type transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,603,543 | 0 | T | C | 99.2%
| 817.6
/ ‑5.2
| 248 | F157L (TTT→CTT) | b1516 | putative LACI‑type transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (127/119); total (128/120) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 272 total aligned reads displayed.
ACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAA > NC_000913/1603451‑1603632
|
actacATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGt > 2:4607330/1‑93 (MQ=255)
tacATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGctt < 2:5178516/93‑1 (MQ=255)
acATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGtttt > 2:6987550/1‑93 (MQ=255)
acATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGcttt > 2:8215672/1‑93 (MQ=255)
aTTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTc > 1:6340042/1‑93 (MQ=255)
tAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTa < 1:5658352/93‑1 (MQ=255)
aTCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACt < 1:6637125/93‑1 (MQ=255)
aTCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGAGCTTTTCTACt > 2:2506451/1‑93 (MQ=255)
tCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTc < 1:1159366/93‑1 (MQ=255)
aGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCaa > 2:6833921/1‑93 (MQ=255)
gggAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAg > 1:8640683/1‑93 (MQ=255)
gggAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAg > 1:7634948/1‑93 (MQ=255)
ggAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGc > 1:2354127/1‑93 (MQ=255)
ggAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGc < 2:1827706/93‑1 (MQ=255)
aaCGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGccc < 2:8805101/93‑1 (MQ=255)
aaCGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGccc > 2:7458234/1‑93 (MQ=255)
aCGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGcccc > 2:3526075/1‑93 (MQ=255)
aCGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGcccc < 2:4940625/93‑1 (MQ=255)
aCGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGcccc < 1:1564374/93‑1 (MQ=255)
aCGCCCGCCCAGTTAGGAGGAATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGcctc > 2:7749166/1‑91 (MQ=255)
cgcccgccCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCa < 2:3751734/93‑1 (MQ=255)
cccgcctAGTTAGGAGGTATGTTGGTGGATATGGCGCCGCTTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCAcc < 2:59813/93‑1 (MQ=255)
cgcccAGTTAGGAGGTATGTTGGTGGATGTGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTCCTCAAGCCCCACCGt < 1:1611436/93‑1 (MQ=255)
ccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTAc < 1:5151856/93‑1 (MQ=255)
ccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTAc < 2:1120242/93‑1 (MQ=255)
tAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGAcc > 1:4951842/1‑93 (MQ=255)
tAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGAcc < 1:3904250/93‑1 (MQ=255)
ggaggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCaa > 2:321999/1‑93 (MQ=255)
ggaggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCaa < 1:2649830/93‑1 (MQ=255)
ggaggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCaa > 2:8393645/1‑93 (MQ=255)
gaggTATGTTGGTGGATATGGCGGCGCGTCAGGTGGATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGACCCACCGTTACGGACCaaa > 2:3708146/1‑93 (MQ=255)
gaggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCaaa > 2:5621430/1‑93 (MQ=255)
gaggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCaaa > 1:5632981/1‑93 (MQ=255)
ggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAAc > 1:8539620/1‑93 (MQ=255)
ggTATGTTGGTGGATAGGGAGGGGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTCCTCAAGCCCCACCGTTACGGACCAAAAc < 1:1526655/93‑1 (MQ=255)
gTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAAcc > 1:3763523/1‑93 (MQ=255)
tATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCa < 2:4698547/93‑1 (MQ=255)
tGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGt < 2:4162312/93‑1 (MQ=255)
ttGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTgg > 2:7213399/1‑93 (MQ=255)
ggtggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGt < 1:7980398/93‑1 (MQ=255)
ggtggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGt < 1:2424985/93‑1 (MQ=255)
ggtggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGt < 1:6144945/93‑1 (MQ=255)
ggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGaa > 1:7510016/1‑93 (MQ=255)
gATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGaaa > 1:6735562/1‑93 (MQ=255)
gATAGGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGaaa < 2:777288/93‑1 (MQ=255)
atatGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAaag < 1:6874660/93‑1 (MQ=255)
atGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCTCTTTTCTCCTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAaagaa < 1:4722653/93‑1 (MQ=255)
atGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAaagaa < 2:1201669/93‑1 (MQ=255)
atGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAaagaa > 2:202372/1‑93 (MQ=255)
cggcgCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcga < 1:4413406/93‑1 (MQ=255)
gcgcGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaa > 2:6271604/1‑93 (MQ=255)
gcgcGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaa > 1:5466436/1‑93 (MQ=255)
cgggTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaag < 1:1097871/90‑1 (MQ=255)
cgcgTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaag < 2:5312621/93‑1 (MQ=255)
gcgTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAATaagcgaaagc < 1:7763325/93‑1 (MQ=255)
gcgTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagc > 1:2784205/1‑93 (MQ=255)
cgTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagcg > 1:3303074/1‑93 (MQ=255)
gTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagcga > 2:2816083/1‑93 (MQ=255)
cAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCACAACCAGTGGGTGAAAGAAgcgaaagagaaa > 1:3603579/1‑93 (MQ=255)
ggTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAAt > 2:3370799/1‑93 (MQ=255)
ggTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAAt < 2:6052551/93‑1 (MQ=255)
gTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATc > 1:2159564/1‑93 (MQ=255)
gTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATc > 1:5097722/1‑93 (MQ=255)
tGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCg < 2:4075347/93‑1 (MQ=255)
gAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGc > 1:3013197/1‑93 (MQ=255)
gAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGc < 1:5966626/93‑1 (MQ=255)
gAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGc > 1:6506140/1‑93 (MQ=255)
aaTAAAGATAAAGCCATAGTCGTGCTTTTTTATTCATGCCCCTTTGTTACGTACCAAAACCAGTGGGTGAAAGAAGTGAATGCTAAAATCGct > 2:8061381/1‑92 (MQ=255)
aaTAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGcc > 1:8443395/1‑93 (MQ=255)
aaTAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGcc > 2:1349217/1‑93 (MQ=255)
aaTAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGAGGGTGAAGGAAGCGAAAGCGAAAATCGcc > 2:7630053/1‑93 (MQ=255)
aTAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAGACCAGTGGGTGAAAGAAGCGAAAGCGAGAATCGCCa > 2:2945544/1‑93 (MQ=255)
tAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCaa > 1:143524/1‑93 (MQ=255)
aaaaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCaa < 1:5835364/92‑1 (MQ=255)
aaaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCaaa < 2:1165034/93‑1 (MQ=255)
aaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAag > 1:6948760/1‑93 (MQ=255)
aaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAag > 1:8358921/1‑93 (MQ=255)
aaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAag > 1:4517247/1‑93 (MQ=255)
aaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCCCCAAag > 2:6190164/1‑93 (MQ=255)
aGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAaga < 2:6080219/93‑1 (MQ=255)
aGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAaga > 1:7286325/1‑93 (MQ=255)
aGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAaga < 2:4317703/93‑1 (MQ=255)
aGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAaga > 2:4375883/1‑93 (MQ=255)
gACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAagag > 2:6651986/1‑93 (MQ=255)
aCAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGc < 1:651804/93‑1 (MQ=255)
aCAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGc < 1:196777/93‑1 (MQ=255)
cAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCa > 1:2507621/1‑93 (MQ=255)
aaaGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCAt > 1:3687350/1‑93 (MQ=255)
aGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATcc > 2:8654089/1‑93 (MQ=255)
aGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATcc > 1:8223401/1‑93 (MQ=255)
gCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCa < 2:128285/93‑1 (MQ=255)
cAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAgg > 1:6084029/1‑93 (MQ=255)
aaaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGc > 2:6382528/1‑93 (MQ=255)
aaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCt > 1:8797746/1‑93 (MQ=255)
aaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCt > 2:5113241/1‑93 (MQ=255)
aGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTg > 2:4859332/1‑93 (MQ=255)
aGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTg < 1:2197806/93‑1 (MQ=255)
gTCGCGCTTTTCTCCTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTgg < 1:819635/93‑1 (MQ=255)
gTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTgg > 2:1402906/1‑93 (MQ=255)
gcgcTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGaa < 1:3436634/93‑1 (MQ=255)
|
ACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAA > NC_000913/1603451‑1603632
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG > NC_000913/1603450‑1603636
|
TACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGC > SRR4302541.7207419/1‑94 (MQ=60)
TACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGC < SRR4302541.4655443/94‑1 (MQ=60)
ACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCT < SRR4302541.1439932/94‑1 (MQ=60)
CTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGCATAAAGACAAAGCCAAAGTCGCGCTT > SRR4302541.8451172/1‑94 (MQ=60)
CTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTT > SRR4302541.5445381/1‑94 (MQ=60)
CTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGATT > SRR4302541.4705002/1‑94 (MQ=60)
TACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTT > SRR4302541.3654812/1‑94 (MQ=60)
CATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTC > SRR4302541.6404864/1‑94 (MQ=60)
CATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTC < SRR4302541.3360626/94‑1 (MQ=60)
TAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGGGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTAC > SRR4302541.3190724/1‑94 (MQ=60)
TAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTAC < SRR4302541.5716139/94‑1 (MQ=60)
AATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACT > SRR4302541.6270299/1‑94 (MQ=60)
AATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACT < SRR4302541.6635815/94‑1 (MQ=60)
ATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTC < SRR4302541.6705177/94‑1 (MQ=60)
TCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCA < SRR4302541.1170486/94‑1 (MQ=60)
TCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCA < SRR4302541.1170485/94‑1 (MQ=60)
CAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAA < SRR4302541.2399966/94‑1 (MQ=60)
CAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAA > SRR4302541.7537287/1‑94 (MQ=60)
AGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAG > SRR4302541.1573891/1‑94 (MQ=60)
AGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAG < SRR4302541.6822356/94‑1 (MQ=60)
AGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAG > SRR4302541.7716389/1‑94 (MQ=60)
AGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAG > SRR4302541.3935795/1‑94 (MQ=60)
AGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAG > SRR4302541.8733239/1‑94 (MQ=60)
GGGATCGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGC < SRR4302541.6582371/94‑1 (MQ=60)
GGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGC > SRR4302541.2377043/1‑94 (MQ=60)
GGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCC > SRR4302541.4800109/1‑94 (MQ=60)
AACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCC > SRR4302541.4713291/1‑94 (MQ=60)
AACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCC > SRR4302541.777167/1‑94 (MQ=60)
AACGCCCGACCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCC < SRR4302541.6436050/94‑1 (MQ=60)
ACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCA < SRR4302541.1580042/94‑1 (MQ=60)
GCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAATCCACAGTCGCGCTTTTCTACTCAAGCCCCACC > SRR4302541.2358920/1‑94 (MQ=60)
GCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACC > SRR4302541.1125088/1‑94 (MQ=60)
GCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACC < SRR4302541.2709624/94‑1 (MQ=60)
CGCCCAGTTAGGAGGTATGTTGGTGGATGTGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTCCTCAAGCCCCACCGTT < SRR4302541.1627451/94‑1 (MQ=60)
CGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGCCAACACCCAAGTTCCGTTTTTCTACGCAAGCGCAACCGTT > SRR4302541.5319408/1‑94 (MQ=60)
CGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTT < SRR4302541.810061/94‑1 (MQ=60)
CGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTT < SRR4302541.2079520/94‑1 (MQ=60)
CCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACG > SRR4302541.8054495/1‑94 (MQ=60)
CCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACG > SRR4302541.8724407/1‑94 (MQ=60)
CCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACG < SRR4302541.5204855/94‑1 (MQ=60)
CCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGACAAAGTCGAGCTATTCTACTCAAGCCCCACCCTTACG > SRR4302541.3942988/1‑94 (MQ=60)
TTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACC > SRR4302541.5002460/1‑94 (MQ=60)
TAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCA < SRR4302541.3943292/94‑1 (MQ=60)
AGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAA > SRR4302541.6797631/1‑94 (MQ=60)
GGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAA < SRR4302541.2676206/94‑1 (MQ=60)
GGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAA > SRR4302541.5690589/1‑94 (MQ=60)
AGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAAC > SRR4302541.7764146/1‑94 (MQ=60)
AGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAAC > SRR4302541.8631429/1‑94 (MQ=60)
AGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAAC > SRR4302541.8631431/1‑94 (MQ=60)
GGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACC < SRR4302541.5533573/94‑1 (MQ=60)
GGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACC < SRR4302541.1541920/94‑1 (MQ=60)
GGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACC > SRR4302541.3801323/1‑94 (MQ=60)
GGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACC < SRR4302541.3824906/94‑1 (MQ=60)
GGTATGTTGGTGGATATGGCGGCGCGTAAGGTTAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCTAAACC < SRR4302541.7064082/94‑1 (MQ=60)
GGTATGTTGGTGGATAGGGAGGGGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTCCTCAAGCCCCACCGTTACGGACCAAAACC < SRR4302541.1541921/94‑1 (MQ=60)
TATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAG < SRR4302541.6081943/94‑1 (MQ=60)
TATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAG < SRR4302541.6081942/94‑1 (MQ=60)
ATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAGAGCCAAAGTCGCGCGTTTCTCCTCAAGCCCCACCGTTACGGACCAAAACCAGT < SRR4302541.3475824/94‑1 (MQ=60)
ATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGT < SRR4302541.3636025/94‑1 (MQ=60)
GTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGG < SRR4302541.1322131/94‑1 (MQ=60)
TTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGG < SRR4302541.5960087/94‑1 (MQ=60)
GGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCCCCGTTACGGACCAAAACCAGTGGGTG < SRR4302541.2611456/94‑1 (MQ=60)
GGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTG < SRR4302541.8068312/94‑1 (MQ=60)
GGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTG < SRR4302541.2448943/94‑1 (MQ=60)
GGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTG < SRR4302541.6207720/94‑1 (MQ=60)
GTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGA < SRR4302541.6373072/94‑1 (MQ=60)
TGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAA > SRR4302541.8310669/1‑94 (MQ=60)
TGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAA > SRR4302541.7590289/1‑94 (MQ=60)
GGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAA > SRR4302541.6807460/1‑94 (MQ=60)
GGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGGGAAA > SRR4302541.7075404/1‑94 (MQ=60)
GGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGGGAAA > SRR4302541.4803755/1‑94 (MQ=60)
ATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGA < SRR4302541.6948072/94‑1 (MQ=60)
ATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGA > SRR4302541.5316257/1‑94 (MQ=60)
ATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCTCTTTTCTCCTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAG < SRR4302541.4770822/94‑1 (MQ=60)
ATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAG < SRR4302541.7392701/94‑1 (MQ=60)
TGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGC < SRR4302541.3446887/94‑1 (MQ=60)
GGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCG > SRR4302541.2236977/1‑94 (MQ=60)
GCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGGTACGGACCAAAACCAGTGGGTGAAAGAAGCGA < SRR4302541.2510866/94‑1 (MQ=60)
CGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAA < SRR4302541.4457637/94‑1 (MQ=60)
GGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAA > SRR4302541.5522509/1‑94 (MQ=60)
GCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAG > SRR4302541.7874533/1‑94 (MQ=60)
CGGGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGC < SRR4302541.1108135/94‑1 (MQ=60)
CGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCGCCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGC < SRR4302541.5154385/94‑1 (MQ=60)
CGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGC < SRR4302541.5612966/94‑1 (MQ=60)
CGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGC < SRR4302541.4483946/94‑1 (MQ=60)
CGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGC < SRR4302541.3737882/94‑1 (MQ=60)
CGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGC > SRR4302541.2812287/1‑94 (MQ=60)
CGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGC < SRR4302541.8431572/94‑1 (MQ=60)
GCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAATAAGCGAAAGCG < SRR4302541.7845916/94‑1 (MQ=60)
GCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCG < SRR4302541.5779608/94‑1 (MQ=60)
GCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCG > SRR4302541.3336274/1‑94 (MQ=60)
TCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCCCCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAA > SRR4302541.2435931/1‑94 (MQ=60)
TCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCACAACCAGTGGGTGAAAGAAGCGAAAGAGAAA > SRR4302541.3640112/1‑94 (MQ=60)
TCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAA > SRR4302541.1583421/1‑94 (MQ=60)
CAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAA < SRR4302541.7102397/94‑1 (MQ=60)
CAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAA > SRR4302541.881924/1‑94 (MQ=60)
AGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAAT > SRR4302541.1998092/1‑94 (MQ=60)
GGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGCAAATC > SRR4302541.5150093/1‑94 (MQ=60)
GGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATC > SRR4302541.5150094/1‑94 (MQ=60)
GGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATC > SRR4302541.2180451/1‑94 (MQ=60)
GTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCG < SRR4302541.8499878/94‑1 (MQ=60)
TGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGC > SRR4302541.3043610/1‑94 (MQ=60)
TGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGC > SRR4302541.6572506/1‑94 (MQ=60)
TGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGC > SRR4302541.6621499/1‑94 (MQ=60)
GAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCC < SRR4302541.6027454/94‑1 (MQ=60)
GAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCC > SRR4302541.8534574/1‑94 (MQ=60)
GAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCC > SRR4302541.6957300/1‑94 (MQ=60)
AATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCA < SRR4302541.6193783/94‑1 (MQ=60)
AATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCA < SRR4302541.8339250/94‑1 (MQ=60)
AATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCA > SRR4302541.7688165/1‑94 (MQ=60)
ATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAA > SRR4302541.144628/1‑94 (MQ=60)
ATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCAAAAATCGCCAA > SRR4302541.4116272/1‑94 (MQ=60)
AAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAA < SRR4302541.5894701/94‑1 (MQ=60)
AAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAG > SRR4302541.4562833/1‑94 (MQ=60)
AAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAG > SRR4302541.7022872/1‑94 (MQ=60)
AAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAG > SRR4302541.8449595/1‑94 (MQ=60)
AAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGA > SRR4302541.7364080/1‑94 (MQ=60)
AGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAG > SRR4302541.5839511/1‑94 (MQ=60)
AGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAG < SRR4302541.2773486/94‑1 (MQ=60)
GACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTCAAAGAAGCGAAAGCGAAAATCGCCAAAGAGC < SRR4302541.1884909/94‑1 (MQ=60)
AGAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCA > SRR4302541.1492590/1‑94 (MQ=60)
ACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCA > SRR4302541.6714439/1‑94 (MQ=60)
ACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCA > SRR4302541.2532902/1‑94 (MQ=60)
ACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCA < SRR4302541.198266/94‑1 (MQ=60)
ACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCA < SRR4302541.657955/94‑1 (MQ=60)
ACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGAA > SRR4302541.1613213/1‑94 (MQ=60)
CAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCAT < SRR4302541.4293619/94‑1 (MQ=60)
CAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCAT > SRR4302541.3724669/1‑94 (MQ=60)
CAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCAT > SRR4302541.8197981/1‑94 (MQ=60)
AAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATC < SRR4302541.3798025/94‑1 (MQ=60)
AAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCC > SRR4302541.2555968/1‑94 (MQ=60)
AAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCC > SRR4302541.8313076/1‑94 (MQ=60)
AGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCA < SRR4302541.2945937/94‑1 (MQ=60)
AGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCA < SRR4302541.5691559/94‑1 (MQ=60)
AGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCA < SRR4302541.1938897/94‑1 (MQ=60)
GCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAG < SRR4302541.5078011/94‑1 (MQ=60)
GCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAG < SRR4302541.3037600/94‑1 (MQ=60)
CCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGG > SRR4302541.6146129/1‑94 (MQ=60)
CCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGG < SRR4302541.6512078/94‑1 (MQ=60)
CAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGC < SRR4302541.8883276/94‑1 (MQ=60)
CAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGC < SRR4302541.8556313/94‑1 (MQ=60)
AAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCT > SRR4302541.8891707/1‑94 (MQ=60)
AAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCT > SRR4302541.8891708/1‑94 (MQ=60)
AGTGGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGG < SRR4302541.2219072/94‑1 (MQ=60)
AGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGG < SRR4302541.2219073/94‑1 (MQ=60)
GTCGCGCTTTTCTCCTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGG < SRR4302541.827103/94‑1 (MQ=60)
GTCGCGCTTTTCTCCTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGG < SRR4302541.6850331/94‑1 (MQ=60)
CGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAA < SRR4302541.5901656/94‑1 (MQ=60)
GCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAA < SRR4302541.3470969/94‑1 (MQ=60)
CGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAAT > SRR4302541.2156091/1‑94 (MQ=60)
GCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATT > SRR4302541.1261126/1‑94 (MQ=60)
GCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATT < SRR4302541.8814898/94‑1 (MQ=60)
GCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATT > SRR4302541.7269510/1‑94 (MQ=60)
CTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG < SRR4302541.8739717/94‑1 (MQ=60)
CTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG > SRR4302541.7849021/1‑94 (MQ=60)
CTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG < SRR4302541.6131669/94‑1 (MQ=60)
CTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG > SRR4302541.6640381/1‑94 (MQ=60)
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TACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG > NC_000913/1603450‑1603636
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
