Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,603,543 |
T→C |
F157L (TTT→CTT) |
b1516 → |
putative LACI‑type transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,603,543 | 0 | T | C | 99.4%
| 599.5
/ NA
| 176 | F157L (TTT→CTT) | b1516 | putative LACI‑type transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (91/84); total (91/85) |
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 187 total aligned reads displayed.
TACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAA > NC_000913/1603453‑1603632
|
tacATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGctt < 2:2312957/93‑1 (MQ=255)
acATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGcttt < 1:4695314/93‑1 (MQ=255)
cATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGctttt < 2:6384967/93‑1 (MQ=255)
cATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGctttt > 2:6329704/1‑93 (MQ=255)
cATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGctttt < 2:4786634/93‑1 (MQ=255)
aTTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTc < 2:1663409/93‑1 (MQ=255)
ttAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCt < 2:5622001/93‑1 (MQ=255)
ttAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCt < 1:2472167/93‑1 (MQ=255)
cAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCa > 2:1598137/1‑93 (MQ=255)
aGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCaa > 2:2357972/1‑93 (MQ=255)
aGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCaa > 2:1085484/1‑93 (MQ=255)
gggAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAg > 2:6354925/1‑93 (MQ=255)
gAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGcc < 1:2642144/93‑1 (MQ=255)
cgcccgccCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCa < 2:5597471/93‑1 (MQ=255)
cgcccgccCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCa > 1:3170835/1‑93 (MQ=255)
cccgcccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCAcc > 2:3708546/1‑93 (MQ=255)
ccgcccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCg > 2:1865812/1‑93 (MQ=255)
ccgcccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCg > 1:528889/1‑93 (MQ=255)
ccgcccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCg > 1:2720214/1‑93 (MQ=255)
ccgcccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCg > 2:5776967/1‑93 (MQ=255)
cgcccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGt < 1:583616/93‑1 (MQ=255)
cgcccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGt > 1:2806579/1‑93 (MQ=255)
cgcccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGt < 1:4408/93‑1 (MQ=255)
cccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTa > 2:5387636/1‑93 (MQ=255)
cccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTa > 1:6082312/1‑93 (MQ=255)
ccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTAc < 2:4605047/93‑1 (MQ=255)
ccAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTAc > 1:2610929/1‑93 (MQ=255)
cAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACg > 2:2965022/1‑93 (MQ=255)
cAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACg < 2:385316/93‑1 (MQ=255)
aGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACgg > 2:2773890/1‑93 (MQ=255)
aGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACgg > 2:5942295/1‑93 (MQ=255)
aGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACgg > 2:827897/1‑93 (MQ=255)
attAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGa < 2:2174734/92‑1 (MQ=255)
ttAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGAc < 1:4201248/93‑1 (MQ=255)
ttAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGAc < 2:5763531/93‑1 (MQ=255)
tAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGAcc > 1:6363332/1‑93 (MQ=255)
tAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGAcc < 2:4241196/93‑1 (MQ=255)
gaggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCaaa < 2:4017263/93‑1 (MQ=255)
gaggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCaaa > 1:1058832/1‑93 (MQ=255)
aggTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCaaaa < 2:4969585/93‑1 (MQ=255)
tATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCa < 1:717690/93‑1 (MQ=255)
aTGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAg < 1:5354043/93‑1 (MQ=255)
tGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGt > 2:2602356/1‑93 (MQ=255)
tttGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTg < 1:1177960/92‑1 (MQ=255)
gTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTg < 2:107223/93‑1 (MQ=255)
gTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTg < 1:3653151/93‑1 (MQ=255)
ttGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTgg < 1:1309350/93‑1 (MQ=255)
ttGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTgg < 2:1436753/93‑1 (MQ=255)
tggtggATATGGCGGCGCTTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTTCTCAAGCCCCACCGTTACGGACCAAAACCAGTggg < 1:100393/93‑1 (MQ=255)
ggtggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGt < 2:1558514/93‑1 (MQ=255)
gtggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTg < 2:1236644/93‑1 (MQ=255)
tggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGa > 1:3598734/1‑93 (MQ=255)
ggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGaa > 2:1649209/1‑93 (MQ=255)
ggATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGaa < 2:1890696/93‑1 (MQ=255)
gATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGaaa > 2:4880671/1‑93 (MQ=255)
gATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGaaa < 1:5866471/93‑1 (MQ=255)
gATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGaaa < 1:3022243/93‑1 (MQ=255)
atGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAaagaa < 1:4883781/93‑1 (MQ=255)
tGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAaagaag > 1:1246917/1‑93 (MQ=255)
ggcggcGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagc < 1:659901/93‑1 (MQ=255)
ggcggcGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagc < 2:1168184/93‑1 (MQ=255)
gcggcgCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcg > 2:554553/1‑93 (MQ=255)
cggcgCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcga > 1:512423/1‑93 (MQ=255)
gcgcGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaa < 1:6229252/93‑1 (MQ=255)
gcgTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagc < 2:2427587/93‑1 (MQ=255)
cgTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagcg < 1:5566694/93‑1 (MQ=255)
cgTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagcg < 2:4764302/93‑1 (MQ=255)
cgTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagcg > 1:3435798/1‑93 (MQ=255)
gTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagcga > 2:5495018/1‑93 (MQ=255)
gTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagcga < 2:3797220/93‑1 (MQ=255)
gTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGaagcgaaagcga > 2:3849760/1‑93 (MQ=255)
cAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAgcgaaagcgaaa > 1:2871201/1‑93 (MQ=255)
ggTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAAt < 1:1866989/93‑1 (MQ=255)
ggTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAAt > 1:795934/1‑93 (MQ=255)
ggTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAAt < 2:2352896/93‑1 (MQ=255)
aaTAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGcc < 1:4768787/93‑1 (MQ=255)
aaaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCaaa > 1:4411364/1‑93 (MQ=255)
aaGACAAAGCCAAAGTGGCGCTTTTCTGCTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAag < 1:2105411/93‑1 (MQ=255)
aaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAag > 1:869982/1‑93 (MQ=255)
aaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAag < 1:6376459/93‑1 (MQ=255)
aaGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGAGAAAGAAGCGAAAGCGAAAATCGCCAAag > 2:2026233/1‑93 (MQ=255)
gACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAagag > 1:382610/1‑93 (MQ=255)
gACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAagag > 2:2988731/1‑93 (MQ=255)
aCAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGc > 2:2380520/1‑93 (MQ=255)
aCAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGc > 2:1670344/1‑93 (MQ=255)
cAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCa < 2:5270547/93‑1 (MQ=255)
cAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCa < 2:3205656/93‑1 (MQ=255)
aaaGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCAt < 2:2495421/93‑1 (MQ=255)
aaGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATc > 2:3325100/1‑93 (MQ=255)
aGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATcc < 1:3272826/93‑1 (MQ=255)
gCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCa > 1:2307596/1‑93 (MQ=255)
ccAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAg > 1:5436760/1‑93 (MQ=255)
ccAAAGTCGCGCATTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAg > 2:3466409/1‑93 (MQ=255)
aaaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGc < 2:1279601/93‑1 (MQ=255)
aaaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGc > 2:740563/1‑93 (MQ=255)
aaaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGc < 2:1000714/93‑1 (MQ=255)
aaaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGc > 2:2694994/1‑93 (MQ=255)
aaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCt > 2:3944390/1‑93 (MQ=255)
aaGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCt > 1:3995294/1‑93 (MQ=255)
aGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTg < 1:545415/93‑1 (MQ=255)
|
TACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAA > NC_000913/1603453‑1603632
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG > NC_000913/1603451‑1603636
|
ACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCT > SRR4302534.1407332/1‑94 (MQ=60)
CTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTT < SRR4302534.6007439/94‑1 (MQ=60)
ACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTT < SRR4302534.4822760/94‑1 (MQ=60)
ACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTT > SRR4302534.2708848/1‑94 (MQ=60)
ATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCACGCTTTTCT < SRR4302534.6473493/94‑1 (MQ=60)
TTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTA > SRR4302534.6579640/1‑94 (MQ=60)
TTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTA < SRR4302534.2537866/94‑1 (MQ=60)
TAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTTTAC > SRR4302534.557192/1‑94 (MQ=60)
AATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACT < SRR4302534.3031223/94‑1 (MQ=60)
GGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGGC > SRR4302534.5701154/1‑94 (MQ=60)
GAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCC < SRR4302534.2712020/94‑1 (MQ=60)
ACGCCGGCACAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCAAAAGTCGCGCTTTTCTACTCAAGCCCCA < SRR4302534.773351/94‑1 (MQ=60)
ACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCA > SRR4302534.3254486/1‑94 (MQ=60)
CCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCG > SRR4302534.542021/1‑94 (MQ=60)
CCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCG > SRR4302534.2791997/1‑94 (MQ=60)
CCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGT > SRR4302534.2880390/1‑94 (MQ=60)
CGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTT < SRR4302534.597889/94‑1 (MQ=60)
CGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTT < SRR4302534.4530/94‑1 (MQ=60)
GCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTA > SRR4302534.6247721/1‑94 (MQ=60)
GCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTA > SRR4302534.5308779/1‑94 (MQ=60)
CCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTAC > SRR4302534.2680013/1‑94 (MQ=60)
CCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTAC > SRR4302534.3946992/1‑94 (MQ=60)
TTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACC > SRR4302534.6535153/1‑94 (MQ=60)
TTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACC < SRR4302534.4314697/94‑1 (MQ=60)
TAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCA > SRR4302534.1475482/1‑94 (MQ=60)
GGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAA < SRR4302534.5039965/94‑1 (MQ=60)
GGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAA > SRR4302534.1086266/1‑94 (MQ=60)
GGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAA < SRR4302534.1155831/94‑1 (MQ=60)
GGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACC < SRR4302534.704277/94‑1 (MQ=60)
GGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACC > SRR4302534.801013/1‑94 (MQ=60)
GTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCA < SRR4302534.888438/94‑1 (MQ=60)
TATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAG < SRR4302534.735386/94‑1 (MQ=60)
ATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGT < SRR4302534.5498387/94‑1 (MQ=60)
ATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGT < SRR4302534.321309/94‑1 (MQ=60)
TTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGG < SRR4302534.1208922/94‑1 (MQ=60)
GTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGG < SRR4302534.3751318/94‑1 (MQ=60)
TTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGG < SRR4302534.965883/94‑1 (MQ=60)
TTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGG < SRR4302534.1343884/94‑1 (MQ=60)
TGGTGGATATGGCGGCGCTTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTTCTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGT < SRR4302534.103078/94‑1 (MQ=60)
GTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGA > SRR4302534.3695515/1‑94 (MQ=60)
GGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAA > SRR4302534.1279139/1‑94 (MQ=60)
GATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAG < SRR4302534.6025760/94‑1 (MQ=60)
GATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAG < SRR4302534.4957777/94‑1 (MQ=60)
GATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAG < SRR4302534.3101413/94‑1 (MQ=60)
ATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAG < SRR4302534.5016234/94‑1 (MQ=60)
ATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAG > SRR4302534.1279775/1‑94 (MQ=60)
ATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAG < SRR4302534.4794633/94‑1 (MQ=60)
GGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCG < SRR4302534.675944/94‑1 (MQ=60)
GCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGA > SRR4302534.525181/1‑94 (MQ=60)
GCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGA < SRR4302534.572619/94‑1 (MQ=60)
GCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAG < SRR4302534.6398348/94‑1 (MQ=60)
CGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGC < SRR4302534.4103797/94‑1 (MQ=60)
GCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCG > SRR4302534.6231365/1‑94 (MQ=60)
GCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCG < SRR4302534.3669996/94‑1 (MQ=60)
GCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCG > SRR4302534.3528130/1‑94 (MQ=60)
CGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGA < SRR4302534.5717026/94‑1 (MQ=60)
GTCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAA < SRR4302534.2935470/94‑1 (MQ=60)
TCAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAA > SRR4302534.2946592/1‑94 (MQ=60)
CAGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAA > SRR4302534.1309630/1‑94 (MQ=60)
AGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAAT > SRR4302534.815908/1‑94 (MQ=60)
AGGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAAT > SRR4302534.2824396/1‑94 (MQ=60)
GGTGAATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATC < SRR4302534.1915575/94‑1 (MQ=60)
GAATAAGGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCC < SRR4302534.2584120/94‑1 (MQ=60)
AATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCA < SRR4302534.4898260/94‑1 (MQ=60)
AATAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCA > SRR4302534.276012/1‑94 (MQ=60)
TAAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAA > SRR4302534.4530432/1‑94 (MQ=60)
AAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAG > SRR4302534.891951/1‑94 (MQ=60)
AAAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAG > SRR4302534.4452433/1‑94 (MQ=60)
AAGACAAAGCCAAAGTGGCGCTTTTCTGCTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGA < SRR4302534.2160712/94‑1 (MQ=60)
AAGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGA < SRR4302534.6548681/94‑1 (MQ=60)
AGACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAG > SRR4302534.392396/1‑94 (MQ=60)
GACAAAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGC > SRR4302534.2166451/1‑94 (MQ=60)
AACAAAGCCAAAGTCTCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGC < SRR4302534.3838981/94‑1 (MQ=60)
AAGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCC > SRR4302534.6001507/1‑94 (MQ=60)
AGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCA < SRR4302534.2146224/94‑1 (MQ=60)
AGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCA > SRR4302534.2368847/1‑94 (MQ=60)
AGCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCA < SRR4302534.3360037/94‑1 (MQ=60)
GCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAG > SRR4302534.5583180/1‑94 (MQ=60)
GCCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAG < SRR4302534.3365688/94‑1 (MQ=60)
CCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGG > SRR4302534.5479250/1‑94 (MQ=60)
CCAAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGG < SRR4302534.4897232/94‑1 (MQ=60)
AAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCT > SRR4302534.6261057/1‑94 (MQ=60)
AAAGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCT > SRR4302534.4102252/1‑94 (MQ=60)
AGTCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGG < SRR4302534.558884/94‑1 (MQ=60)
TCGCGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGA < SRR4302534.3726633/94‑1 (MQ=60)
CGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAAT > SRR4302534.5476857/1‑94 (MQ=60)
CGCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATAGCCAAAGAGCATCCAGGCTGGGAAAT > SRR4302534.1317861/1‑94 (MQ=60)
GCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATT < SRR4302534.2485094/94‑1 (MQ=60)
GCTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATT > SRR4302534.3996800/1‑94 (MQ=60)
CTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG < SRR4302534.6607556/94‑1 (MQ=60)
CTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG < SRR4302534.1087913/94‑1 (MQ=60)
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ACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTG > NC_000913/1603451‑1603636
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
