Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,154,920 |
C→T |
P192S (CCG→TCG) |
tmk → |
thymidylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,154,920 | 0 | C | T | 100.0%
| 743.7
/ NA
| 193 | P192S (CCG→TCG) | tmk | thymidylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (99/94); total (99/94) |
Only 100 of 200 total aligned reads displayed.
GAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGCCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGAC > NC_000913/1154830‑1155009
|
gAATCTTTCGATTTCTTTAATCGCACGCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCg > 1:1157445/1‑93 (MQ=255)
tCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTg > 2:5948983/1‑93 (MQ=255)
tttCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGa < 1:5820180/93‑1 (MQ=255)
tttCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGa > 2:3987748/1‑93 (MQ=255)
ttCGATTTCTTTAATCGCGCCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAg < 2:421680/93‑1 (MQ=255)
ttCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAg < 2:2148414/93‑1 (MQ=255)
ttCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAg < 1:4442134/93‑1 (MQ=255)
tCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAgg > 1:949022/1‑93 (MQ=255)
gATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGcc > 1:3295324/1‑93 (MQ=255)
aTTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCg < 2:4497701/93‑1 (MQ=255)
aTTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCg > 1:674953/1‑93 (MQ=255)
aTTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCg > 1:2439737/1‑93 (MQ=255)
aTTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCg > 1:354314/1‑93 (MQ=255)
tttCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGt < 1:2111420/93‑1 (MQ=255)
tttCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGt > 1:1139270/1‑93 (MQ=255)
tCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTga < 2:752850/93‑1 (MQ=255)
tAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTgatgga < 2:15189/93‑1 (MQ=255)
tCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGc < 2:1150170/93‑1 (MQ=255)
gCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCaa > 1:2252395/1‑93 (MQ=255)
cACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAAt < 2:620749/93‑1 (MQ=255)
cACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAAt > 2:5243581/1‑93 (MQ=255)
aCCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATc > 2:4977346/1‑93 (MQ=255)
cccGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATcc < 1:5233214/93‑1 (MQ=255)
cgcgCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGc > 2:4886150/1‑93 (MQ=255)
cgcCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCAc < 1:3960864/93‑1 (MQ=255)
gcCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACt < 2:5132285/93‑1 (MQ=255)
cccGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTa < 2:4244696/93‑1 (MQ=255)
ccGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTAc < 2:5999749/93‑1 (MQ=255)
ccGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTAc > 2:6389249/1‑93 (MQ=255)
cGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTAcc > 2:1394345/1‑93 (MQ=255)
gCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCg > 1:1579833/1‑93 (MQ=255)
tATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTg < 2:3249756/93‑1 (MQ=255)
aTCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGa > 2:5001934/1‑93 (MQ=255)
ggAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCa > 1:6138515/1‑93 (MQ=255)
gAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGAccccc < 1:2095919/93‑3 (MQ=255)
gAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCAc > 1:704133/1‑93 (MQ=255)
gAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCAc < 1:4791207/93‑1 (MQ=255)
gAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCAc < 2:5319607/93‑1 (MQ=255)
aaCTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACt < 2:1548826/93‑1 (MQ=255)
aaCTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACt > 2:2851455/1‑93 (MQ=255)
aaCTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACt > 2:1962968/1‑93 (MQ=255)
aCTGGCAGCTCAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTg < 1:879789/93‑1 (MQ=255)
aCTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTg < 2:3140090/93‑1 (MQ=255)
cTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTgg > 1:4206755/1‑93 (MQ=255)
ggCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGt < 1:5206938/93‑1 (MQ=255)
gcagcaCAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTg < 1:5420862/93‑1 (MQ=255)
cagcaCAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGa < 2:5019918/93‑1 (MQ=255)
agcaCAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGaa < 1:2851455/93‑1 (MQ=255)
agcaCAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGaa < 2:2340175/93‑1 (MQ=255)
agcaCAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGaa < 1:4432721/93‑1 (MQ=255)
gcaCAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAg > 1:4784714/1‑93 (MQ=255)
acaAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGa > 2:2386194/1‑93 (MQ=255)
acaAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGa > 2:4775075/1‑93 (MQ=255)
acaAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGa < 1:5374938/93‑1 (MQ=255)
acaAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGa > 2:5688618/1‑93 (MQ=255)
acaAGATAAAAGCATTCATACCATGGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGa < 1:1385161/93‑1 (MQ=255)
aaGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGt < 1:6458375/93‑1 (MQ=255)
aaGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCCCACTACCGTGACCCACTGGGTGAAGGAGt < 2:725480/93‑1 (MQ=255)
aGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGtt < 1:781997/93‑1 (MQ=255)
aGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGtt < 1:3490657/93‑1 (MQ=255)
aGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGtt > 2:5565151/1‑93 (MQ=255)
gATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTg < 1:391539/93‑1 (MQ=255)
gATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTg > 2:5781382/1‑93 (MQ=255)
tAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGa < 1:2277046/93‑1 (MQ=255)
aaaaGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGAc > 2:3628021/1‑93 (MQ=255)
aaaaGCATTCATACCATTGATGACACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGAc > 1:1824406/1‑93 (MQ=255)
aaGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGc < 2:1026714/93‑1 (MQ=255)
gCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCAt < 2:3828311/93‑1 (MQ=255)
gCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCAt < 2:5162717/93‑1 (MQ=255)
cATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATg < 1:4679698/93‑1 (MQ=255)
cATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACGACCGTGACCCACTGGGTGAAGGAGTTGGACGCATg < 1:5833346/93‑1 (MQ=255)
aTTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATga > 2:3578903/1‑93 (MQ=255)
tCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATgaca < 1:4052413/93‑3 (MQ=255)
cATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGAt < 1:5868249/93‑1 (MQ=255)
ccATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTa < 2:1764353/93‑1 (MQ=255)
ccATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTa < 1:3649683/93‑1 (MQ=255)
ccATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTa > 1:6122035/1‑93 (MQ=255)
cATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTAt < 2:4357117/93‑1 (MQ=255)
aTTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATc > 1:4295615/1‑93 (MQ=255)
ttGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATcc > 2:544262/1‑93 (MQ=255)
tGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCa > 2:6037774/1‑93 (MQ=255)
gATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCAt < 2:2526849/93‑1 (MQ=255)
gCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGt < 1:1689013/93‑1 (MQ=255)
gCCACCAAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGt < 1:5519818/93‑1 (MQ=255)
cACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTa < 1:1109531/93‑1 (MQ=255)
cACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTa < 2:1822159/93‑1 (MQ=255)
cACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTa < 1:3218682/93‑1 (MQ=255)
aCCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAc > 2:4422095/1‑93 (MQ=255)
aCCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAc > 2:3430259/1‑93 (MQ=255)
aCCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAc > 1:5479643/1‑93 (MQ=255)
aCCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAc < 1:4357227/93‑1 (MQ=255)
aCCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAc > 2:973843/1‑93 (MQ=255)
cccAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACg > 2:4323649/1‑93 (MQ=255)
cccAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACg > 2:3551196/1‑93 (MQ=255)
cccAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACg < 1:5699851/93‑1 (MQ=255)
ccAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGa > 2:2287979/1‑93 (MQ=255)
ccAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGa > 2:1129251/1‑93 (MQ=255)
cAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGAc > 1:970240/1‑93 (MQ=255)
cAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGAc > 1:4919592/1‑93 (MQ=255)
cAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGAc > 1:1027136/1‑93 (MQ=255)
|
GAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGCCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGAC > NC_000913/1154830‑1155009
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAGAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGCCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCTGA > NC_000913/1154827‑1155013
|
CAAGAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGT > SRR4302534.5233793/1‑94 (MQ=60)
AAGAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTC < SRR4302534.5986858/94‑1 (MQ=60)
AAGAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTC < SRR4302534.5992274/94‑1 (MQ=60)
AGAATCTTTCGATTTCTTTAATCGCACGCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCG > SRR4302534.1187806/1‑94 (MQ=60)
AGAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCG < SRR4302534.1840089/94‑1 (MQ=60)
ATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTG > SRR4302534.4560964/1‑94 (MQ=60)
TCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGG < SRR4302534.1416355/94‑1 (MQ=60)
TTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAG < SRR4302534.5978156/94‑1 (MQ=60)
TTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGG > SRR4302534.973177/1‑94 (MQ=60)
TTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGG < SRR4302534.4562135/94‑1 (MQ=60)
CGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCC > SRR4302534.3383235/1‑94 (MQ=60)
CGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCC < SRR4302534.877845/94‑1 (MQ=60)
GATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCG > SRR4302534.2504582/1‑94 (MQ=60)
GATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCG < SRR4302534.596207/94‑1 (MQ=60)
GATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCG > SRR4302534.363379/1‑94 (MQ=60)
GATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCG > SRR4302534.691413/1‑94 (MQ=60)
GATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCG > SRR4302534.4831514/1‑94 (MQ=60)
ATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGT > SRR4302534.1169071/1‑94 (MQ=60)
TTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTG < SRR4302534.2166940/94‑1 (MQ=60)
CTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATG > SRR4302534.1171797/1‑94 (MQ=60)
CTTTAATCGCACCCGCGCACGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGGCGCTCGAGGCCGTGAGG > SRR4302534.3563567/1‑94 (MQ=60)
TTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGG > SRR4302534.2155430/1‑94 (MQ=60)
TTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGA > SRR4302534.4487487/1‑94 (MQ=60)
TTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGA < SRR4302534.5782700/94‑1 (MQ=60)
TCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCA > SRR4302534.3886377/1‑94 (MQ=60)
CGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAA > SRR4302534.2312105/1‑94 (MQ=60)
GCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAAT > SRR4302534.6294926/1‑94 (MQ=60)
GCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCAATCATACCAATGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAAT > SRR4302534.6638714/1‑94 (MQ=60)
CCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCG < SRR4302534.5374502/94‑1 (MQ=60)
CGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCA > SRR4302534.5385210/1‑94 (MQ=60)
CGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCA > SRR4302534.5666111/1‑94 (MQ=60)
GCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCAC < SRR4302534.1812801/94‑1 (MQ=60)
CGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACT < SRR4302534.4066916/94‑1 (MQ=60)
GCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTA > SRR4302534.1115884/1‑94 (MQ=60)
CCCGCTATCTGGAACTGGCAGCACTAGATAAAAGCATTCATACCATTGCTGCCACCCAGTCGCTGGCGGCCGTCACGCATGCACTCCGCACTAC > SRR4302534.4353294/1‑94 (MQ=60)
CGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCG > SRR4302534.1621161/1‑94 (MQ=60)
TATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGA > SRR4302534.984996/1‑94 (MQ=60)
TATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGA < SRR4302534.3691194/94‑1 (MQ=60)
CTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCC > SRR4302534.798831/1‑94 (MQ=60)
CTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCC > SRR4302534.3073201/1‑94 (MQ=60)
TGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCA > SRR4302534.2787449/1‑94 (MQ=60)
TGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCA > SRR4302534.6305478/1‑94 (MQ=60)
GGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCAC > SRR4302534.4435853/1‑94 (MQ=60)
GGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCAC > SRR4302534.721404/1‑94 (MQ=60)
GAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCCCT < SRR4302534.2150904/94‑1 (MQ=60)
GAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACT < SRR4302534.4921302/94‑1 (MQ=60)
ACTGGCAGCTCAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGG < SRR4302534.902041/94‑1 (MQ=60)
ACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGG > SRR4302534.4320296/1‑94 (MQ=60)
GGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTG < SRR4302534.1573767/94‑1 (MQ=60)
GGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTG < SRR4302534.5347442/94‑1 (MQ=60)
GCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGA < SRR4302534.5566736/94‑1 (MQ=60)
AGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAG > SRR4302534.4914648/1‑94 (MQ=60)
AGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAG < SRR4302534.4552418/94‑1 (MQ=60)
AGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAG < SRR4302534.2926367/94‑1 (MQ=60)
CACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGA < SRR4302534.4675688/94‑1 (MQ=60)
CACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGA < SRR4302534.1992112/94‑1 (MQ=60)
ACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAG > SRR4302534.2190912/1‑94 (MQ=60)
ACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAG < SRR4302534.5519773/94‑1 (MQ=60)
ACAAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAG > SRR4302534.5571113/1‑94 (MQ=60)
ACAAGATAAAAGCATTCATACCATGGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAG < SRR4302534.1421627/94‑1 (MQ=60)
CACGATAAAAGCATTAATACGATTGATGCCCCCCAGACGCTGGAGGCCGTGATGGATGCAATCCCCACTACCGTGACCCACTGGGTGAAGGAGT < SRR4302534.4928303/94‑1 (MQ=60)
CAAAAAAAAACCATTCATACCATTGATGCCGCCAAGTCGCTGGAGGCCGTGATGATTGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGT < SRR4302534.3385900/94‑1 (MQ=60)
AAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTT < SRR4302534.6632357/94‑1 (MQ=60)
AAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTT > SRR4302534.5367036/1‑94 (MQ=60)
AAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTT > SRR4302534.5978993/1‑94 (MQ=60)
AAGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTT > SRR4302534.4148340/1‑94 (MQ=60)
AGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTG < SRR4302534.801501/94‑1 (MQ=60)
AGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTG < SRR4302534.3584480/94‑1 (MQ=60)
AGATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTG < SRR4302534.6163669/94‑1 (MQ=60)
GATAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGG < SRR4302534.401550/94‑1 (MQ=60)
TAAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGAC < SRR4302534.2337468/94‑1 (MQ=60)
TAAAAGCATTCATACCATTGATGACACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGAC > SRR4302534.1871851/1‑94 (MQ=60)
AAAAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACG > SRR4302534.170217/1‑94 (MQ=60)
AAGCATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCA > SRR4302534.92577/1‑94 (MQ=60)
CATTCATTCCATTGCTGCCACCCAGTCGCTGGAGGCCGTGATGGATCCAATCCTCTCTACCGTGCCCCACTGGGTGAAGGAGTTGGACGCATGA < SRR4302534.5659044/94‑1 (MQ=60)
CATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGA < SRR4302534.4806746/94‑1 (MQ=60)
CATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGA < SRR4302534.599248/94‑1 (MQ=60)
CATTCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACGACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGA < SRR4302534.5991697/94‑1 (MQ=60)
TCATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGACAT < SRR4302534.4161110/94‑1 (MQ=60)
CATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATG < SRR4302534.6027582/94‑1 (MQ=60)
CATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATG > SRR4302534.1156512/1‑94 (MQ=60)
ATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGG < SRR4302534.6505581/94‑1 (MQ=60)
ATACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACACATGAGATGG > SRR4302534.5530410/1‑94 (MQ=60)
TCCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTA < SRR4302534.3621561/94‑1 (MQ=60)
ACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTA < SRR4302534.2822664/94‑1 (MQ=60)
ACCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTA > SRR4302534.6288558/1‑94 (MQ=60)
CCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTAT > SRR4302534.2329226/1‑94 (MQ=60)
CCATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTAT < SRR4302534.3747767/94‑1 (MQ=60)
CATTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATC > SRR4302534.4412013/1‑94 (MQ=60)
TTGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCA < SRR4302534.713272/94‑1 (MQ=60)
TGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCAT > SRR4302534.4188509/1‑94 (MQ=60)
TGATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCAT > SRR4302534.3326683/1‑94 (MQ=60)
GATGCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATG > SRR4302534.5213068/1‑94 (MQ=60)
GCCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTT < SRR4302534.1732924/94‑1 (MQ=60)
GCCACCAAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTT < SRR4302534.5668759/94‑1 (MQ=60)
CCACCCAGTCGCTGGAGGCCGTTATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTA < SRR4302534.4965742/94‑1 (MQ=60)
CCACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTA < SRR4302534.4984863/94‑1 (MQ=60)
CACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAC < SRR4302534.1138466/94‑1 (MQ=60)
CACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAC < SRR4302534.3304124/94‑1 (MQ=60)
CACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAC > SRR4302534.4054445/1‑94 (MQ=60)
CACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAC > SRR4302534.5627411/1‑94 (MQ=60)
CACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTAC < SRR4302534.2486367/94‑1 (MQ=60)
ACCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACG < SRR4302534.4474806/94‑1 (MQ=60)
CCCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGA < SRR4302534.5854258/94‑1 (MQ=60)
CCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGAC > SRR4302534.5052928/1‑94 (MQ=60)
CCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGAC > SRR4302534.994960/1‑94 (MQ=60)
CCAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGAC > SRR4302534.1053591/1‑94 (MQ=60)
CAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACT > SRR4302534.547337/1‑94 (MQ=60)
CAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACC > SRR4302534.4668844/1‑94 (MQ=60)
CAGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACC > SRR4302534.5654250/1‑94 (MQ=60)
AGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCT < SRR4302534.5222330/94‑1 (MQ=60)
AGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCT > SRR4302534.1449336/1‑94 (MQ=60)
AGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCT > SRR4302534.2525179/1‑94 (MQ=60)
AGTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCT > SRR4302534.1387814/1‑94 (MQ=60)
GTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCTG < SRR4302534.4117579/94‑1 (MQ=60)
GTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCTG < SRR4302534.5874042/94‑1 (MQ=60)
GTCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGCGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCTG > SRR4302534.5243171/1‑94 (MQ=60)
TCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCTGA > SRR4302534.796499/1‑94 (MQ=60)
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CAAGAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGCCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGAGATGGTATCCATGGTTACGACCTGA > NC_000913/1154827‑1155013
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
