Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,212,474 |
A→G |
intergenic (‑144/+77) |
ycgX ← / ← ycgE |
hypothetical protein/putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,212,474 | 0 | A | G | 99.5%
| 710.2
/ ‑4.5
| 203 | intergenic (‑144/+77) | ycgX/ycgE | hypothetical protein/putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (83/119); total (83/120) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.25e-01 |
Only 100 of 208 total aligned reads displayed.
TACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATG > NC_000913/1212385‑1212562
|
aCCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGa > 1:6428494/1‑93 (MQ=255)
aCCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGa > 1:4613180/1‑93 (MQ=255)
aCCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGa > 2:1093059/1‑93 (MQ=255)
ccACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGAc < 2:3158628/93‑1 (MQ=255)
cACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGTAGCGGAcc < 1:6309531/93‑1 (MQ=255)
aCTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCa < 1:2348469/93‑1 (MQ=255)
ttCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGc > 2:4399762/1‑93 (MQ=255)
ttCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGc > 1:3733929/1‑93 (MQ=255)
tCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCt < 2:1238236/93‑1 (MQ=255)
taaTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCtt < 2:6089665/92‑2 (MQ=255)
aaTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTcc < 1:1234176/93‑1 (MQ=255)
aaTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTcc < 2:1184104/93‑1 (MQ=255)
aTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCg > 2:3547858/1‑93 (MQ=255)
aTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCg > 2:698704/1‑93 (MQ=255)
tCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCgg < 1:4925496/93‑1 (MQ=255)
cTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGt < 1:3986889/93‑1 (MQ=255)
ggTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTAc < 2:4819393/93‑1 (MQ=255)
tCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGCGAGCATTTTGCAGCGGACCAGCTCCGGTACaa > 1:1312921/1‑93 (MQ=255)
cTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACaaa > 1:3647333/1‑93 (MQ=255)
cTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACaaa > 2:614761/1‑93 (MQ=255)
gTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACg > 2:4512750/1‑93 (MQ=255)
tCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGc > 2:1125422/1‑93 (MQ=255)
cTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtg < 2:3805887/93‑1 (MQ=255)
tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt < 2:2054776/93‑1 (MQ=255)
tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt > 2:4142140/1‑93 (MQ=255)
tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt < 2:5644336/93‑1 (MQ=255)
tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt < 1:1828496/93‑1 (MQ=255)
ttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgtt < 2:768714/93‑1 (MQ=255)
ggCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgttgt > 1:3762500/1‑93 (MQ=255)
gCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTtgtg < 2:3297118/93‑1 (MQ=255)
cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg < 1:6473641/93‑1 (MQ=255)
tgtgATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTggg > 2:4788287/1‑93 (MQ=255)
tgtgATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTggg > 2:5022618/1‑93 (MQ=255)
tgtgATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTggg > 1:1361083/1‑93 (MQ=255)
gtgATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGt > 2:2652801/1‑93 (MQ=255)
gtgATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGt < 2:6234639/93‑1 (MQ=255)
gtgATATGTACAGAGTGCGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGt < 2:5247763/93‑1 (MQ=255)
tgATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGtt < 1:4989384/93‑1 (MQ=255)
gATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTc < 1:1148097/93‑1 (MQ=255)
atatGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCa > 1:2762391/1‑93 (MQ=255)
tatGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAg < 2:4941035/93‑1 (MQ=255)
atGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGa < 2:935150/93‑1 (MQ=255)
aCAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATtat > 2:5755948/1‑93 (MQ=255)
cAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATtata > 2:5908413/1‑93 (MQ=255)
cAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATtata > 2:4203332/1‑93 (MQ=255)
agagTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATaa > 1:1500296/1‑93 (MQ=255)
gagTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAAc < 1:1877163/93‑1 (MQ=255)
agTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACa > 2:2288192/1‑93 (MQ=255)
gtgtGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAt > 1:2671548/1‑93 (MQ=255)
gtgATAGAGGGAATATCTGAATTCTCTCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTc < 1:3455470/93‑1 (MQ=255)
gtgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTc < 2:2156062/93‑1 (MQ=255)
tgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCt < 1:5957309/93‑1 (MQ=255)
tgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCt < 2:2997416/93‑1 (MQ=255)
gATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTg > 2:6325334/1‑93 (MQ=255)
gATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCCGTTGTGGGTTCAGATTATAACATTCTg > 1:165721/1‑93 (MQ=255)
aTAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGt < 2:2604485/93‑1 (MQ=255)
agagGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCt < 1:2920537/93‑1 (MQ=255)
gagGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTa > 1:6204211/1‑93 (MQ=255)
gagGGAATATCTGAATTCTCCCGGGGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTa > 2:5155771/1‑93 (MQ=255)
agGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTaa < 2:5130173/93‑1 (MQ=255)
agGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTaa < 1:727265/93‑1 (MQ=255)
agGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTaa < 2:2202478/93‑1 (MQ=255)
agGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTaa < 1:4290962/93‑1 (MQ=255)
agGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCCCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATGCTGTCTaa < 2:2272752/93‑1 (MQ=255)
ggAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAgg > 1:3141920/1‑93 (MQ=255)
gAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAggg < 2:4607771/93‑1 (MQ=255)
gAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAggg > 1:4528899/1‑93 (MQ=255)
gAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAggg < 1:3472925/93‑1 (MQ=255)
atatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGc < 1:5413048/93‑1 (MQ=255)
atatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGc > 1:5775615/1‑93 (MQ=255)
tatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCg > 2:6004099/1‑93 (MQ=255)
atCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCgg < 1:706543/93‑1 (MQ=255)
atCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCgg < 1:6355854/93‑1 (MQ=255)
atCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGCGCgg > 2:3065645/1‑93 (MQ=255)
cTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGa < 1:1986038/93‑1 (MQ=255)
tGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGAt > 2:2751147/1‑93 (MQ=255)
gAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATa < 1:4240458/93‑1 (MQ=255)
aaTTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATaa > 2:1367922/1‑93 (MQ=255)
aaTTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGATGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATaa < 1:5627671/93‑1 (MQ=255)
tctcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAgg < 2:3625542/93‑1 (MQ=255)
tctcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAgg < 1:5115355/93‑1 (MQ=255)
tctcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAgg > 2:5137561/1‑93 (MQ=255)
tctcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAgg < 2:2334422/93‑1 (MQ=255)
ctcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGt < 2:4908615/93‑1 (MQ=255)
cccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGa < 2:2670343/93‑1 (MQ=255)
cccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGa < 2:1639090/93‑1 (MQ=255)
ccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGaa > 1:1005867/1‑93 (MQ=255)
tGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTa > 1:4566503/1‑93 (MQ=255)
gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg < 2:5050152/93‑1 (MQ=255)
gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg > 1:304411/1‑93 (MQ=255)
gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTGCAGATTATACCATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg < 2:5525295/93‑1 (MQ=255)
aGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgg < 1:2175179/93‑1 (MQ=255)
gCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAggg < 2:2926793/93‑1 (MQ=255)
gCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAggg > 1:991433/1‑93 (MQ=255)
aTTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAggggg < 2:3877518/93‑1 (MQ=255)
aTTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAggggg > 2:3059680/1‑93 (MQ=255)
ttttGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGc < 1:3060304/93‑1 (MQ=255)
ttttGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGc > 1:4778123/1‑93 (MQ=255)
ttttGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGc > 2:840489/1‑93 (MQ=255)
tGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATg > 2:1480039/1‑93 (MQ=255)
|
TACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATG > NC_000913/1212385‑1212562
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAG > NC_000913/1212383‑1212566
|
TTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCG < SRR4302534.3037947/94‑1 (MQ=60)
TACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGA > SRR4302534.6601837/1‑94 (MQ=60)
TACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGA > SRR4302534.4738380/1‑94 (MQ=60)
CACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGTAGCGGACCA < SRR4302534.6480117/94‑1 (MQ=60)
CACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCA < SRR4302534.2783033/94‑1 (MQ=60)
CACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCA < SRR4302534.1278679/94‑1 (MQ=60)
CACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCA < SRR4302534.3615132/94‑1 (MQ=60)
ACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAG < SRR4302534.2410792/94‑1 (MQ=60)
CTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGC > SRR4302534.3834241/1‑94 (MQ=60)
CTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGC < SRR4302534.4888013/94‑1 (MQ=60)
TCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTC > SRR4302534.1363326/1‑94 (MQ=60)
TCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTC < SRR4302534.4356218/94‑1 (MQ=60)
TCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTC < SRR4302534.2300511/94‑1 (MQ=60)
CAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCC < SRR4302534.123403/94‑1 (MQ=60)
AATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCG < SRR4302534.1266700/94‑1 (MQ=60)
ATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGG < SRR4302534.6440106/94‑1 (MQ=60)
TCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGT < SRR4302534.5058981/94‑1 (MQ=60)
CTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTA < SRR4302534.4093567/94‑1 (MQ=60)
CTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTA > SRR4302534.4063908/1‑94 (MQ=60)
GGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACA < SRR4302534.2805756/94‑1 (MQ=60)
GGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACA > SRR4302534.4734265/1‑94 (MQ=60)
GTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGCGAGCATTTTGCAGCGGACCAGCTCCGGTACAA > SRR4302534.1347541/1‑94 (MQ=60)
TCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAA > SRR4302534.3745338/1‑94 (MQ=60)
CTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAAC < SRR4302534.4663566/94‑1 (MQ=60)
GTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGC > SRR4302534.4614133/1‑94 (MQ=60)
CCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTG < SRR4302534.5112690/94‑1 (MQ=60)
CTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGT > SRR4302534.3125745/1‑94 (MQ=60)
TTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTT < SRR4302534.1876056/94‑1 (MQ=60)
TGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGT > SRR4302534.3863519/1‑94 (MQ=60)
TGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGG > SRR4302534.4999812/1‑94 (MQ=60)
GCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATGCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGG < SRR4302534.1695532/94‑1 (MQ=60)
GCTGTGATATCTACAGAGTGTGATCGAGGTAATATCTGAATTCTCCCGGTGAGCTTTTTGCAGCGGACCAGCTCCCGTACACACGCTTTTGTGG < SRR4302534.1021376/94‑1 (MQ=60)
CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG < SRR4302534.6648029/94‑1 (MQ=60)
CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG > SRR4302534.1767717/1‑94 (MQ=60)
CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG > SRR4302534.1396957/1‑94 (MQ=60)
GTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTT < SRR4302534.678454/94‑1 (MQ=60)
GTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTT < SRR4302534.6636868/94‑1 (MQ=60)
GTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTT < SRR4302534.1942024/94‑1 (MQ=60)
TGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTC < SRR4302534.5124372/94‑1 (MQ=60)
GATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCA > SRR4302534.2835137/1‑94 (MQ=60)
GATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCA < SRR4302534.1178186/94‑1 (MQ=60)
TATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGA > SRR4302534.5460534/1‑94 (MQ=60)
TATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGA > SRR4302534.3840211/1‑94 (MQ=60)
ATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGAT < SRR4302534.3550413/94‑1 (MQ=60)
TGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATT > SRR4302534.1882794/1‑94 (MQ=60)
CAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAA > SRR4302534.1539778/1‑94 (MQ=60)
AGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAAC < SRR4302534.4376418/94‑1 (MQ=60)
GAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACA < SRR4302534.1926039/94‑1 (MQ=60)
AGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAT > SRR4302534.2742155/1‑94 (MQ=60)
TGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTC > SRR4302534.5225054/1‑94 (MQ=60)
GTGATAGAGGGAATATCTGAATTCTCTCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCT < SRR4302534.3548351/94‑1 (MQ=60)
TGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTG < SRR4302534.1507671/94‑1 (MQ=60)
TGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTG < SRR4302534.6119066/94‑1 (MQ=60)
TGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCCGTTGTGGGTTCAGATTATAACATTCTG > SRR4302534.170067/1‑94 (MQ=60)
GATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGT < SRR4302534.6553928/94‑1 (MQ=60)
ATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTC < SRR4302534.6452361/94‑1 (MQ=60)
AGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTA > SRR4302534.6372914/1‑94 (MQ=60)
AGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTA < SRR4302534.2997177/94‑1 (MQ=60)
AGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTA > SRR4302534.3156677/1‑94 (MQ=60)
AGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAG < SRR4302534.4407223/94‑1 (MQ=60)
AGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAG < SRR4302534.745219/94‑1 (MQ=60)
AGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAG < SRR4302534.218200/94‑1 (MQ=60)
AGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAG > SRR4302534.382822/1‑94 (MQ=60)
GGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGG > SRR4302534.3224555/1‑94 (MQ=60)
GGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGG > SRR4302534.4651597/1‑94 (MQ=60)
GGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGG > SRR4302534.4236713/1‑94 (MQ=60)
GAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGG < SRR4302534.3566271/94‑1 (MQ=60)
GAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGG < SRR4302534.6014240/94‑1 (MQ=60)
AATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGC > SRR4302534.5932288/1‑94 (MQ=60)
ATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCG > SRR4302534.5726746/1‑94 (MQ=60)
ATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCG < SRR4302534.5558655/94‑1 (MQ=60)
ATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGG < SRR4302534.648600/94‑1 (MQ=60)
ATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGG < SRR4302534.6527506/94‑1 (MQ=60)
ATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGG < SRR4302534.723887/94‑1 (MQ=60)
ATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGG < SRR4302534.752407/94‑1 (MQ=60)
TCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGA > SRR4302534.2700123/1‑94 (MQ=60)
CTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGAT < SRR4302534.2038043/94‑1 (MQ=60)
TGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATA < SRR4302534.73717/94‑1 (MQ=60)
GAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAA < SRR4302534.4354788/94‑1 (MQ=60)
AATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGATGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAA < SRR4302534.5779968/94‑1 (MQ=60)
ATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAG < SRR4302534.3000988/94‑1 (MQ=60)
TCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGT < SRR4302534.5253402/94‑1 (MQ=60)
TCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGA > SRR4302534.3490141/1‑94 (MQ=60)
CCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAA > SRR4302534.1031668/1‑94 (MQ=60)
GTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTA < SRR4302534.1174380/94‑1 (MQ=60)
GTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTA > SRR4302534.4690298/1‑94 (MQ=60)
TGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAG > SRR4302534.312260/1‑94 (MQ=60)
GAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGG > SRR4302534.6147918/1‑94 (MQ=60)
AGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGG < SRR4302534.2232645/94‑1 (MQ=60)
AGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGG > SRR4302534.1016799/1‑94 (MQ=60)
ATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGC > SRR4302534.4907875/1‑94 (MQ=60)
TTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCA < SRR4302534.3140607/94‑1 (MQ=60)
TTGCAGCGGACCAGCTCCGGTTCAAACCCTGTTGTGGGTTCAGATTATAACATTCTGGCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATG < SRR4302534.2945967/94‑1 (MQ=60)
TTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATG < SRR4302534.5924320/94‑1 (MQ=60)
CAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGTGGCGGGATAAAGGTGAAATTAGGTGGCATGAAA > SRR4302534.4379516/1‑94 (MQ=60)
AGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAG > SRR4302534.395634/1‑94 (MQ=60)
AGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAG < SRR4302534.4955242/94‑1 (MQ=60)
AGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAG < SRR4302534.3763462/94‑1 (MQ=60)
AGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAG > SRR4302534.5451234/1‑94 (MQ=60)
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TTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAG > NC_000913/1212383‑1212566
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
