Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,212,474	A→G	intergenic (‑144/+77)	ycgX ← / ← ycgE	hypothetical protein/putative transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,212,474	0	A	G	99.3%	989.4 / ‑3.3	289	intergenic (‑144/+77)	ycgX/ycgE	hypothetical protein/putative transcriptional regulator
Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (127/159); total (129/160)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.32e-01

Only 100 of 295 total aligned reads displayed.

TTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGA  >  NC_000913/1212384‑1212563

ttACCACTTCGATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCg                                                                                         <  1:6185757/93‑1 (MQ=255)

ttACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCg                                                                                         >  1:8315528/1‑93 (MQ=255)

   ccACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGAc                                                                                      <  1:103904/93‑1 (MQ=255)

    cACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCTGAcc                                                                                     >  2:6547138/1‑93 (MQ=255)

    cACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGAcc                                                                                     <  1:5344616/93‑1 (MQ=255)

      cTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAg                                                                                   <  2:3162995/93‑1 (MQ=255)

       ttCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGc                                                                                  >  1:2912309/1‑93 (MQ=255)

       ttCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGc                                                                                  >  1:6230189/1‑93 (MQ=255)

          aaTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTcc                                                                               <  2:4846532/93‑1 (MQ=255)

           aTCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCg                                                                              >  1:7556841/1‑93 (MQ=255)

            tCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCgg                                                                             >  2:4008000/1‑93 (MQ=255)

             cTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGt                                                                            >  2:7679575/1‑93 (MQ=255)

             cTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGt                                                                            >  1:5797818/1‑93 (MQ=255)

               ggTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTAc                                                                          >  2:7464795/1‑93 (MQ=255)

               ggTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTAc                                                                          >  1:1523316/1‑93 (MQ=255)

                 tCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACaa                                                                        <  1:8536604/93‑1 (MQ=255)

                   tGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAAc                                                                      >  1:24979/1‑93 (MQ=255)

                     tCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGc                                                                    <  2:2785110/93‑1 (MQ=255)

                     tCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGc                                                                    >  1:3418152/1‑93 (MQ=255)

                     tCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCCCCGGTACAAACGc                                                                    <  1:1274481/93‑1 (MQ=255)

                       cTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCCGCTCCGGTACAAACGCtg                                                                  >  2:1896920/1‑93 (MQ=255)

                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 <  2:6930774/93‑1 (MQ=255)

                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 <  2:6601045/93‑1 (MQ=255)

                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 <  1:7525632/93‑1 (MQ=255)

                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 >  2:6386427/1‑93 (MQ=255)

                        tttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATAGCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgt                                                                 <  1:6289842/93‑1 (MQ=255)

                         ttGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgtt                                                                <  2:5954278/93‑1 (MQ=255)

                          tGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgttg                                                               >  2:3869204/1‑93 (MQ=255)

                          tGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgttg                                                               <  2:5546551/93‑1 (MQ=255)

                           ggCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCtgttgt                                                              >  1:7263060/1‑93 (MQ=255)

                           ggCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGATCCGGTACAAACGCtgttgt                                                              >  2:4121773/1‑93 (MQ=255)

                             cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg                                                            <  1:5569110/93‑1 (MQ=255)

                             cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg                                                            <  2:1940310/93‑1 (MQ=255)

                             cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg                                                            <  1:3792286/93‑1 (MQ=255)

                             cTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTgg                                                            <  2:1270905/93‑1 (MQ=255)

                                tgATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGtt                                                         <  2:5704192/93‑1 (MQ=255)

                                 gATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTc                                                        <  1:2767400/93‑1 (MQ=255)

                                 gATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTc                                                        >  2:2232838/1‑93 (MQ=255)

                                  atatGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCa                                                       >  2:2642872/1‑93 (MQ=255)

                                   tatGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAg                                                      >  1:767965/1‑93 (MQ=255)

                                    atGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGa                                                     >  2:1065641/1‑93 (MQ=255)

                                    atGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGa                                                     <  1:6756575/93‑1 (MQ=255)

                                    atGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGa                                                     <  2:6227157/93‑1 (MQ=255)

                                      gTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTAGAAACGCTGTTGTGGGTTCAGAtt                                                   >  2:4756268/1‑93 (MQ=255)

                                      gTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGAtt                                                   <  1:8747731/93‑1 (MQ=255)

                                          agagTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATaa                                               >  1:3880578/1‑93 (MQ=255)

                                          agagTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATaa                                               >  1:302438/1‑93 (MQ=255)

                                            agTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCATCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACa                                             <  2:1389878/93‑1 (MQ=255)

                                            agTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACa                                             >  2:7798326/1‑93 (MQ=255)

                                             gtgtGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAt                                            >  2:7261096/1‑93 (MQ=255)

                                             gtggGATAGAGGGAATATCTGAATTCTCCCGGAGAGCATTTTGCAGCGGACCAGCTCCGGTACCAACGCTGATGTGGGTTCAGGTTATAACAt                                            >  2:7929010/1‑93 (MQ=255)

                                              tgtgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAtt                                           <  1:1765754/93‑1 (MQ=255)

                                              tgtgATAGAGGGAATATCTGAATTCTACCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAtt                                           >  2:2857054/1‑93 (MQ=255)

                                               gtgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTc                                          >  2:2981885/1‑93 (MQ=255)

                                               gtgATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTc                                          <  1:1727824/93‑1 (MQ=255)

                                                 gATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTg                                        <  1:4127323/93‑1 (MQ=255)

                                                   tAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCCGTTGTGGGTTCAGATTATAACATTCTGTc                                      >  1:5926759/1‑93 (MQ=255)

                                                     gagGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTa                                    >  2:8250331/1‑93 (MQ=255)

                                                      agGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTaa                                   <  2:8477068/93‑1 (MQ=255)

                                                       gggAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAg                                  >  2:6038837/1‑93 (MQ=255)

                                                       gggAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAg                                  >  1:6795029/1‑93 (MQ=255)

                                                        ggAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAgg                                 <  2:5553266/93‑1 (MQ=255)

                                                         gAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAggg                                <  1:7440552/93‑1 (MQ=255)

                                                           atatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGc                              >  1:95798/1‑93 (MQ=255)

                                                           atatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGc                              <  1:6020607/93‑1 (MQ=255)

                                                           atatCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGc                              >  1:8105355/1‑93 (MQ=255)

                                                             atCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCgg                            <  1:4672889/93‑1 (MQ=255)

                                                                tGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGAt                         >  1:1329230/1‑93 (MQ=255)

                                                                tGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGAt                         >  2:393937/1‑93 (MQ=255)

                                                                 gAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATa                        >  1:2653474/1‑93 (MQ=255)

                                                                 gAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATa                        <  1:6959381/93‑1 (MQ=255)

                                                                 gAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATa                        <  1:2238068/93‑1 (MQ=255)

                                                                  aaTTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATaa                       >  1:8641034/1‑93 (MQ=255)

                                                                    ttCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAg                     <  1:850071/93‑1 (MQ=255)

                                                                    ttCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAg                     >  1:5474155/1‑93 (MQ=255)

                                                                       tcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTg                  <  2:6697386/93‑1 (MQ=255)

                                                                       tcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTg                  >  2:5002978/1‑93 (MQ=255)

                                                                       tcCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTg                  >  1:5666131/1‑93 (MQ=255)

                                                                        cccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGa                 <  1:2083891/93‑1 (MQ=255)

                                                                        cccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGa                 >  2:1615054/1‑93 (MQ=255)

                                                                         ccGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGGGaa                >  1:3831057/1‑93 (MQ=255)

                                                                          cGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGaaa               >  2:5233512/1‑93 (MQ=255)

                                                                            gTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAAtt             <  1:4504319/93‑1 (MQ=255)

                                                                            gTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAAtt             <  2:469608/93‑1 (MQ=255)

                                                                            gTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAAtt             >  1:4079141/1‑93 (MQ=255)

                                                                             tGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTa            <  1:1380435/93‑1 (MQ=255)

                                                                             tGAGCATTTTCCAGCGGACCAGCTCCGGGACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTa            >  1:3641004/1‑93 (MQ=255)

                                                                              gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg           <  2:4332908/93‑1 (MQ=255)

                                                                              gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg           >  1:6921469/1‑93 (MQ=255)

                                                                              gAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAg           <  1:7811992/93‑1 (MQ=255)

                                                                               aGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgg          >  2:552112/1‑93 (MQ=255)

                                                                               aGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgg          <  1:5028525/93‑1 (MQ=255)

                                                                               aGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgg          <  2:3427791/93‑1 (MQ=255)

                                                                                gCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAggg         <  2:92838/93‑1 (MQ=255)

                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTTTAAGGGGCGGGATAAAGGTGAAATTAgggg        <  1:4185450/93‑1 (MQ=255)

                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgggg        <  2:2537928/93‑1 (MQ=255)

                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgggg        <  1:6567834/93‑1 (MQ=255)

                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgggg        >  1:525258/1‑93 (MQ=255)

                                                                                 cATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAgggg        <  1:4859847/93‑1 (MQ=255)

                                                                                  aTTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAggggg       >  1:7927336/1‑93 (MQ=255)

TTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGA  >  NC_000913/1212384‑1212563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAGA  >  NC_000913/1212381‑1212567

GTTTTACCACTTCAATCTGGGCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAG                                                                                               >  SRR4302541.919986/1‑94 (MQ=60)

  TTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCG                                                                                             >  SRR4302541.8405891/1‑94 (MQ=60)

   TTACCACTTCGATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGG                                                                                            <  SRR4302541.6248953/94‑1 (MQ=60)

   TTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGG                                                                                            <  SRR4302541.6766016/94‑1 (MQ=60)

    TACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGA                                                                                           >  SRR4302541.5600539/1‑94 (MQ=60)

      CCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACC                                                                                         <  SRR4302541.104777/94‑1 (MQ=60)

       CACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCA                                                                                        <  SRR4302541.5399564/94‑1 (MQ=60)

         CTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGC                                                                                      >  SRR4302541.6293850/1‑94 (MQ=60)

         CTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGC                                                                                      >  SRR4302541.3268309/1‑94 (MQ=60)

         CTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGC                                                                                      >  SRR4302541.2941595/1‑94 (MQ=60)

         CTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGC                                                                                      <  SRR4302541.8649910/94‑1 (MQ=60)

          TTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGTAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCT                                                                                     <  SRR4302541.4956175/94‑1 (MQ=60)

          TTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCT                                                                                     >  SRR4302541.988582/1‑94 (MQ=60)

           TCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTC                                                                                    <  SRR4302541.6858895/94‑1 (MQ=60)

            CAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCC                                                                                   >  SRR4302541.6266831/1‑94 (MQ=60)

             AATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCG                                                                                  >  SRR4302541.7637596/1‑94 (MQ=60)

              ATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGG                                                                                 >  SRR4302541.4001834/1‑94 (MQ=60)

              ATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGG                                                                                 <  SRR4302541.4818006/94‑1 (MQ=60)

              ATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGG                                                                                 >  SRR4302541.749617/1‑94 (MQ=60)

               TCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGT                                                                                >  SRR4302541.5856714/1‑94 (MQ=60)

               TCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGT                                                                                >  SRR4302541.5856713/1‑94 (MQ=60)

                 TGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTAC                                                                              >  SRR4302541.1538539/1‑94 (MQ=60)

                  GGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGCTAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACA                                                                             >  SRR4302541.6855193/1‑94 (MQ=60)

                  GGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACA                                                                             >  SRR4302541.6785514/1‑94 (MQ=60)

                   GTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAA                                                                            <  SRR4302541.2562377/94‑1 (MQ=60)

                    TCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAA                                                                           <  SRR4302541.8628399/94‑1 (MQ=60)

                     CTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAAC                                                                          <  SRR4302541.7775476/94‑1 (MQ=60)

                     CTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAAC                                                                          >  SRR4302541.25179/1‑94 (MQ=60)

                      TGTCCTTTGGCTGTGATATGTACAGAGTGTGATCGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACG                                                                         <  SRR4302541.3729359/94‑1 (MQ=60)

                       GTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGC                                                                        >  SRR4302541.3452280/1‑94 (MQ=60)

                        TCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCT                                                                       <  SRR4302541.5358056/94‑1 (MQ=60)

                        TCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCT                                                                       <  SRR4302541.7756825/94‑1 (MQ=60)

                        TCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCT                                                                       >  SRR4302541.2733408/1‑94 (MQ=60)

                        TCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCT                                                                       <  SRR4302541.7170532/94‑1 (MQ=60)

                        TCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCT                                                                       >  SRR4302541.1965380/1‑94 (MQ=60)

                        TCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCG                                                                       >  SRR4302541.2221925/1‑94 (MQ=60)

                        TCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCCCCGGTACAAACGCT                                                                       <  SRR4302541.1287143/94‑1 (MQ=60)

                         CCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTG                                                                      <  SRR4302541.3627218/94‑1 (MQ=60)

                          CTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGT                                                                     <  SRR4302541.4701742/94‑1 (MQ=60)

                          CTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACAAGCTCCGGTACAAACGCTGT                                                                     >  SRR4302541.7020897/1‑94 (MQ=60)

                           TTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTT                                                                    >  SRR4302541.5326906/1‑94 (MQ=60)

                           TTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTT                                                                    <  SRR4302541.4952163/94‑1 (MQ=60)

                           TTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTT                                                                    <  SRR4302541.7606048/94‑1 (MQ=60)

                           TTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTT                                                                    <  SRR4302541.6354102/94‑1 (MQ=60)

                           TTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTT                                                                    <  SRR4302541.8695525/94‑1 (MQ=60)

                           TTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTT                                                                    <  SRR4302541.5684460/94‑1 (MQ=60)

                           TTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATAGCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTT                                                                    <  SRR4302541.6354103/94‑1 (MQ=60)

                             TGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGT                                                                  >  SRR4302541.7340540/1‑94 (MQ=60)

                             TGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGT                                                                  >  SRR4302541.6272251/1‑94 (MQ=60)

                             TGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGT                                                                  <  SRR4302541.568225/94‑1 (MQ=60)

                              GGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTG                                                                 <  SRR4302541.7072994/94‑1 (MQ=60)

                               GCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGG                                                                <  SRR4302541.5179255/94‑1 (MQ=60)

                               GCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGG                                                                <  SRR4302541.6980181/94‑1 (MQ=60)

                                GTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG                                                               <  SRR4302541.5864754/94‑1 (MQ=60)

                                CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG                                                               <  SRR4302541.940809/94‑1 (MQ=60)

                                CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG                                                               <  SRR4302541.5864755/94‑1 (MQ=60)

                                CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG                                                               >  SRR4302541.6229312/1‑94 (MQ=60)

                                CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG                                                               >  SRR4302541.5408362/1‑94 (MQ=60)

                                CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG                                                               <  SRR4302541.5626120/94‑1 (MQ=60)

                                CTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGG                                                               <  SRR4302541.3830423/94‑1 (MQ=60)

                                 TGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGT                                                              <  SRR4302541.1304621/94‑1 (MQ=60)

                                  GTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTT                                                             <  SRR4302541.1768129/94‑1 (MQ=60)

                                    GATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCA                                                           <  SRR4302541.2795256/94‑1 (MQ=60)

                                     ATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAG                                                          >  SRR4302541.775160/1‑94 (MQ=60)

                                       ATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGAT                                                        >  SRR4302541.629261/1‑94 (MQ=60)

                                       ATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGAT                                                        <  SRR4302541.6828835/94‑1 (MQ=60)

                                        TGTACAGAGTGTGATAGAGGGAATATCTGAATTCGCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATT                                                       <  SRR4302541.3859898/94‑1 (MQ=60)

                                         GTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTA                                                      <  SRR4302541.2718960/94‑1 (MQ=60)

                                         GTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTA                                                      <  SRR4302541.8841323/94‑1 (MQ=60)

                                          TACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTAT                                                     <  SRR4302541.578188/94‑1 (MQ=60)

                                            CGGAGTTTGATAGAGGGAATATCTGAATTGTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAA                                                   <  SRR4302541.8259806/94‑1 (MQ=60)

                                            CAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAA                                                   >  SRR4302541.3919541/1‑94 (MQ=60)

                                            CAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAA                                                   >  SRR4302541.305093/1‑94 (MQ=60)

                                            CAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAA                                                   >  SRR4302541.1511859/1‑94 (MQ=60)

                                             CGAGTGTGATAGAGGGAATATCTGAATTCTCCCTGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAAC                                                  <  SRR4302541.1728648/94‑1 (MQ=60)

                                             AGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAAC                                                  <  SRR4302541.5598386/94‑1 (MQ=60)

                                              GAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACA                                                 <  SRR4302541.7613621/94‑1 (MQ=60)

                                               AGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAT                                                >  SRR4302541.4707539/1‑94 (MQ=60)

                                               AGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACAT                                                <  SRR4302541.2832446/94‑1 (MQ=60)

                                                 TGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTC                                              <  SRR4302541.13674/94‑1 (MQ=60)

                                                 TGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTC                                              <  SRR4302541.1782933/94‑1 (MQ=60)

                                                  GTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCT                                             <  SRR4302541.1744698/94‑1 (MQ=60)

                                                  GTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCT                                             <  SRR4302541.2484687/94‑1 (MQ=60)

                                                   TGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTG                                            <  SRR4302541.6108745/94‑1 (MQ=60)

                                                   TGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTG                                            >  SRR4302541.7620236/1‑94 (MQ=60)

                                                    GATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGT                                           <  SRR4302541.4168094/94‑1 (MQ=60)

                                                    GATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGT                                           <  SRR4302541.7696994/94‑1 (MQ=60)

                                                    GATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGT                                           <  SRR4302541.2015974/94‑1 (MQ=60)

                                                    GATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGT                                           <  SRR4302541.4168096/94‑1 (MQ=60)

                                                     ATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGTTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTC                                          >  SRR4302541.5987116/1‑94 (MQ=60)

                                                     ATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCCGTTGTGGGTTCAGATTATAACATTCTGTC                                          >  SRR4302541.5987115/1‑94 (MQ=60)

                                                       AGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTA                                        >  SRR4302541.4165680/1‑94 (MQ=60)

                                                        GAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAA                                       <  SRR4302541.8603421/94‑1 (MQ=60)

                                                        GAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAA                                       <  SRR4302541.5256432/94‑1 (MQ=60)

                                                         AGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAG                                      >  SRR4302541.6867698/1‑94 (MQ=60)

                                                         AGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAG                                      <  SRR4302541.3954342/94‑1 (MQ=60)

                                                           GGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGG                                    >  SRR4302541.3188293/1‑94 (MQ=60)

                                                           GGAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGG                                    <  SRR4302541.3877472/94‑1 (MQ=60)

                                                            GAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGG                                   <  SRR4302541.2181289/94‑1 (MQ=60)

                                                            GAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGG                                   <  SRR4302541.4721180/94‑1 (MQ=60)

                                                            GAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGG                                   <  SRR4302541.7520066/94‑1 (MQ=60)

                                                            GAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGG                                   <  SRR4302541.7594390/94‑1 (MQ=60)

                                                            GAATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGG                                   >  SRR4302541.3678963/1‑94 (MQ=60)

                                                             AATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGC                                  >  SRR4302541.8194190/1‑94 (MQ=60)

                                                             AATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGC                                  >  SRR4302541.96624/1‑94 (MQ=60)

                                                              ATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCG                                 >  SRR4302541.8837014/1‑94 (MQ=60)

                                                              ATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCG                                 <  SRR4302541.7483417/94‑1 (MQ=60)

                                                              ATATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCG                                 <  SRR4302541.6082311/94‑1 (MQ=60)

                                                               TTTCTGAAATCTCCCGGTGAGCATTTTGCAGAGGACCAGCTCCGGTTCAAACGCTGTTGTGGGTTCTGATTATAACATTCTGTCTAAGGGGCGG                                <  SRR4302541.7907430/94‑1 (MQ=60)

                                                               TATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGG                                <  SRR4302541.1358218/94‑1 (MQ=60)

                                                                ATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGG                               <  SRR4302541.4720477/94‑1 (MQ=60)

                                                                ATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGG                               <  SRR4302541.8154480/94‑1 (MQ=60)

                                                                ATCTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGG                               >  SRR4302541.8863011/1‑94 (MQ=60)

                                                                  CTGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGAT                             >  SRR4302541.1342292/1‑94 (MQ=60)

                                                                   TGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAATATTCTGTCTCAGGGGCGGGATA                            >  SRR4302541.1106373/1‑94 (MQ=60)

                                                                   TGAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATA                            >  SRR4302541.2679877/1‑94 (MQ=60)

                                                                    GAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAA                           >  SRR4302541.8733594/1‑94 (MQ=60)

                                                                    GAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAA                           <  SRR4302541.7033568/94‑1 (MQ=60)

                                                                    GAATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAA                           <  SRR4302541.2259744/94‑1 (MQ=60)

                                                                     AATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAA                          >  SRR4302541.4303054/1‑94 (MQ=60)

                                                                     AATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAA                          >  SRR4302541.8527302/1‑94 (MQ=60)

                                                                      ATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAG                         <  SRR4302541.1426758/94‑1 (MQ=60)

                                                                      ATTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAG                         >  SRR4302541.5530291/1‑94 (MQ=60)

                                                                       TTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGG                        <  SRR4302541.857803/94‑1 (MQ=60)

                                                                       TTCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGG                        <  SRR4302541.857802/94‑1 (MQ=60)

                                                                       TTCTCCCGGGGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGG                        >  SRR4302541.8092702/1‑94 (MQ=60)

                                                                        TCTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGG                       >  SRR4302541.6078669/1‑94 (MQ=60)

                                                                         CTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTG                      >  SRR4302541.5723985/1‑94 (MQ=60)

                                                                         CTCCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTG                      >  SRR4302541.7837415/1‑94 (MQ=60)

                                                                           CCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAA                    <  SRR4302541.2104072/94‑1 (MQ=60)

                                                                           CCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAA                    >  SRR4302541.1756629/1‑94 (MQ=60)

                                                                           CCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAA                    >  SRR4302541.3039865/1‑94 (MQ=60)

                                                                           CCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAA                    >  SRR4302541.6574021/1‑94 (MQ=60)

                                                                           CCCGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGGGAA                    >  SRR4302541.3869654/1‑94 (MQ=60)

                                                                             CGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAAT                  <  SRR4302541.4142795/94‑1 (MQ=60)

                                                                             CGGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAAT                  <  SRR4302541.2655461/94‑1 (MQ=60)

                                                                              GGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAACGGTGAAATT                 >  SRR4302541.386311/1‑94 (MQ=60)

                                                                              GGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATT                 <  SRR4302541.7587730/94‑1 (MQ=60)

                                                                              GGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATT                 >  SRR4302541.4119404/1‑94 (MQ=60)

                                                                              GGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATT                 <  SRR4302541.8293560/94‑1 (MQ=60)

                                                                              GGTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATT                 <  SRR4302541.7985611/94‑1 (MQ=60)

                                                                               GTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTA                <  SRR4302541.6941987/94‑1 (MQ=60)

                                                                               GTGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTA                <  SRR4302541.4549756/94‑1 (MQ=60)

                                                                               GTGAGCATTTTCCAGCGGACCAGCTCCGGGACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTA                >  SRR4302541.3677929/1‑94 (MQ=60)

                                                                                tgcgcagttcGCAACGGACTAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGGGGGATAAAGGTGAAATTAG               <  SRR4302541.2497207/84‑1 (MQ=60)

                                                                                TGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAG               >  SRR4302541.6995331/1‑94 (MQ=60)

                                                                                TGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAG               <  SRR4302541.1393995/94‑1 (MQ=60)

                                                                                TGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAG               >  SRR4302541.300729/1‑94 (MQ=60)

                                                                                TGAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAG               >  SRR4302541.5433391/1‑94 (MQ=60)

                                                                                 GAGCATTTTGGAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGAGGGATAAAGGTGAAATTAGG              <  SRR4302541.2902812/94‑1 (MQ=60)

                                                                                 GAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGG              <  SRR4302541.7896445/94‑1 (MQ=60)

                                                                                 GAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGG              >  SRR4302541.1699351/1‑94 (MQ=60)

                                                                                 GAGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGG              <  SRR4302541.3886806/94‑1 (MQ=60)

                                                                                  AGCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGG             <  SRR4302541.5080235/94‑1 (MQ=60)

                                                                                   GCATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGG            >  SRR4302541.530175/1‑94 (MQ=60)

                                                                                    CATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTTTAAGGGGCGGGATAAAGGTGAAATTAGGGGG           <  SRR4302541.4226977/94‑1 (MQ=60)

                                                                                    CATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGG           <  SRR4302541.4909412/94‑1 (MQ=60)

                                                                                    CATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGG           >  SRR4302541.8014618/1‑94 (MQ=60)

                                                                                    CATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGG           >  SRR4302541.8756354/1‑94 (MQ=60)

                                                                                    CATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGG           <  SRR4302541.6635024/94‑1 (MQ=60)

                                                                                    CATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGG           >  SRR4302541.3529683/1‑94 (MQ=60)

                                                                                     ATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGC          <  SRR4302541.6440060/94‑1 (MQ=60)

                                                                                     ATTTTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGC          >  SRR4302541.1294565/1‑94 (MQ=60)

                                                                                        TTGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATG       <  SRR4302541.8598279/94‑1 (MQ=60)

                                                                                         TGCAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGA      >  SRR4302541.4547272/1‑94 (MQ=60)

                                                                                           CAGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAA    <  SRR4302541.4525743/94‑1 (MQ=60)

                                                                                            AGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAG   <  SRR4302541.2200898/94‑1 (MQ=60)

                                                                                            AGCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAG   <  SRR4302541.1350759/94‑1 (MQ=60)

                                                                                             GCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAGA  <  SRR4302541.5859541/94‑1 (MQ=60)

                                                                                             GCGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAGA  <  SRR4302541.1468483/94‑1 (MQ=60)

GTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACGGACCAGCTCCGGTACAAACGCTGTTGTGGGTTCAGATTATAACATTCTGTCTAAGGGGCGGGATAAAGGTGAAATTAGGGGGCATGAAAGA  >  NC_000913/1212381‑1212567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`