Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,503,894 |
T→C |
T71A (ACC→GCC) |
b1433 ← |
putative membrane transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,503,894 | 0 | T | C | 100.0%
| 834.3
/ NA
| 240 | T71A (ACC→GCC) | b1433 | putative membrane transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (124/116); total (124/116) |
Only 100 of 243 total aligned reads displayed.
TGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGTGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTG > NC_000913/1503804‑1503983
|
tGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCga < 2:53822/93‑1 (MQ=255)
ggTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCgag > 1:2310652/1‑93 (MQ=255)
gTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCgaga < 2:8386/93‑1 (MQ=255)
gACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAAc < 2:4948635/93‑1 (MQ=255)
aCAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACa < 2:5569711/93‑1 (MQ=255)
aCAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACa < 2:5059550/93‑1 (MQ=255)
aCAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACa < 1:5297819/93‑1 (MQ=255)
cAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAg < 1:1421811/93‑1 (MQ=255)
cAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAg > 1:4345197/1‑93 (MQ=255)
aTAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGt < 1:3304315/93‑1 (MQ=255)
aTAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGt > 2:4558592/1‑93 (MQ=255)
aTAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGt < 1:2554021/93‑1 (MQ=255)
aaaaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAc < 1:3232702/93‑1 (MQ=255)
aaaaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAc < 2:1228819/93‑1 (MQ=255)
aaaaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAc > 2:1164631/1‑93 (MQ=255)
aaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAcgc < 1:6112616/93‑1 (MQ=255)
aaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAcgc > 2:423933/1‑93 (MQ=255)
aCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGa > 2:3939730/1‑93 (MQ=255)
cGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGAt > 2:5173043/1‑93 (MQ=255)
cGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGAt > 1:1775375/1‑93 (MQ=255)
ccGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACATAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATAc < 1:5191054/93‑1 (MQ=255)
ccGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATAc < 2:1505188/93‑1 (MQ=255)
gATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCa > 1:4227109/1‑93 (MQ=255)
tGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATa < 2:6416683/93‑1 (MQ=255)
tGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATa < 2:247733/93‑1 (MQ=255)
ggCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATaa > 2:4786312/1‑93 (MQ=255)
cTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATg < 2:3546210/93‑1 (MQ=255)
cTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATg < 2:2227755/93‑1 (MQ=255)
ttCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGt > 1:1147194/1‑93 (MQ=255)
tCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTc < 1:3698378/93‑1 (MQ=255)
tCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTc > 1:2781925/1‑93 (MQ=255)
cGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCa < 1:197947/93‑1 (MQ=255)
gTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCag > 1:394105/1‑93 (MQ=255)
gTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCag > 2:5176723/1‑93 (MQ=255)
gTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCag > 1:3285066/1‑93 (MQ=255)
ttAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCaga < 1:5668458/93‑1 (MQ=255)
ttAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCaga > 2:2558969/1‑93 (MQ=255)
tAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCagag < 2:4460053/93‑1 (MQ=255)
tAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCagag < 2:3291032/93‑1 (MQ=255)
tAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCagag < 1:4454779/93‑1 (MQ=255)
tAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCagag > 1:1585988/1‑93 (MQ=255)
aaGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGt > 2:3259570/1‑93 (MQ=255)
aaGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGt > 2:578557/1‑93 (MQ=255)
aaGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGt > 1:1822267/1‑93 (MQ=255)
aGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTc > 1:1903711/1‑93 (MQ=255)
aGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTc < 1:2537587/93‑1 (MQ=255)
aGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTc > 1:3527302/1‑93 (MQ=255)
aGTCTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTc < 1:930594/93‑1 (MQ=255)
gtgtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCa < 2:234807/93‑1 (MQ=255)
gtgtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCa > 2:6103916/1‑93 (MQ=255)
gtgtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCa < 2:5689738/93‑1 (MQ=255)
tgtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAg > 1:4115262/1‑93 (MQ=255)
gtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCTATACCATAATGTCAGAGTCAGc < 1:736146/93‑1 (MQ=255)
ttAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATCCCATAATGTCAGAGTCAGCg < 1:3157692/93‑1 (MQ=255)
aGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACTATGCGGCGCGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTa > 1:3623269/1‑93 (MQ=255)
aGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTa > 1:5761660/1‑93 (MQ=255)
aGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTa < 2:4710516/93‑1 (MQ=255)
gTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTAc > 1:2932643/1‑93 (MQ=255)
cccTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTAccg < 1:6177733/93‑3 (MQ=255)
cccTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGATGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTg > 2:3554001/1‑93 (MQ=255)
cTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGAc < 2:3076319/93‑1 (MQ=255)
aaTCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGccc < 2:712998/93‑1 (MQ=255)
ccGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCAtt < 1:6462462/93‑1 (MQ=255)
ccGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCAtt > 2:1772222/1‑93 (MQ=255)
ccGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCAtt > 1:5652163/1‑93 (MQ=255)
cGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTg > 2:1398396/1‑93 (MQ=255)
cGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGGACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTg > 1:5427217/1‑93 (MQ=255)
gACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGACAGCGTACTGACGCCCATTGCCAg > 1:78113/1‑93 (MQ=255)
aCCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGc < 1:2278063/93‑1 (MQ=255)
ccAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGcc > 1:318657/1‑93 (MQ=255)
aacaaAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGcccc > 2:876096/1‑93 (MQ=255)
aaGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACTCCCATTGCCATCCCCAgcg < 1:6309295/93‑1 (MQ=255)
aaGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAgcg > 1:1081764/1‑93 (MQ=255)
aGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAgcgc < 1:1658532/93‑1 (MQ=255)
aGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAgcgc < 2:4417686/93‑1 (MQ=255)
cgcgCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGt < 2:3422628/93‑1 (MQ=255)
cgcgCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGt < 2:4921064/93‑1 (MQ=255)
gcCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCAGAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCAt > 2:4525788/1‑93 (MQ=255)
ccAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATc < 1:1136223/93‑1 (MQ=255)
ccAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATc > 1:3776784/1‑93 (MQ=255)
cAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATcc < 1:4272683/93‑1 (MQ=255)
cAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATcc < 1:4756904/93‑1 (MQ=255)
cAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATcc < 1:5531331/93‑1 (MQ=255)
ggCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccag > 2:2920414/1‑93 (MQ=255)
ggCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccag > 2:766559/1‑93 (MQ=255)
ggCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccag > 2:220937/1‑93 (MQ=255)
ggCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccac > 2:3721825/1‑92 (MQ=255)
gCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccagc > 2:5365093/1‑93 (MQ=255)
gCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccagc > 1:2227776/1‑93 (MQ=255)
gTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccagcca < 1:5009028/93‑1 (MQ=255)
tGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCaga < 2:4370529/93‑1 (MQ=255)
tGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCaga > 1:2414530/1‑93 (MQ=255)
gACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCagag < 1:2322302/93‑1 (MQ=255)
cATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGAtt < 2:2659239/93‑1 (MQ=255)
aTGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGAttt > 1:5106598/1‑93 (MQ=255)
aTGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGAttt > 1:4254501/1‑93 (MQ=255)
tGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTtg > 1:4827371/1‑93 (MQ=255)
gcggcgAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTtgt < 2:127698/93‑1 (MQ=255)
gcggcgAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTtgt > 2:3732736/1‑93 (MQ=255)
cGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTtgtg < 2:2773063/93‑1 (MQ=255)
|
TGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGTGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTG > NC_000913/1503804‑1503983
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGTGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGT > NC_000913/1503801‑1503987
|
CGTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGC > SRR4302534.3344284/1‑94 (MQ=60)
GTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCTATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCG > SRR4302534.3689599/1‑94 (MQ=60)
GTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCG < SRR4302534.5304094/94‑1 (MQ=60)
GTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCG > SRR4302534.5252532/1‑94 (MQ=60)
GTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCG > SRR4302534.3541781/1‑94 (MQ=60)
GTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCG > SRR4302534.4429078/1‑94 (MQ=60)
GTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCG < SRR4302534.6005731/94‑1 (MQ=60)
TTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGA < SRR4302534.4185480/94‑1 (MQ=60)
TTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGA < SRR4302534.410203/94‑1 (MQ=60)
TGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAG > SRR4302534.2371978/1‑94 (MQ=60)
TGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAG > SRR4302534.2915600/1‑94 (MQ=60)
TGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAG > SRR4302534.1889038/1‑94 (MQ=60)
TGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCAGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAAC < SRR4302534.906170/94‑1 (MQ=60)
GGACAATAAAGACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAAC < SRR4302534.3835096/94‑1 (MQ=60)
ACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAG > SRR4302534.4462547/1‑94 (MQ=60)
ACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAG < SRR4302534.5440801/94‑1 (MQ=60)
CAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGG < SRR4302534.371269/94‑1 (MQ=60)
CAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGG < SRR4302534.1459222/94‑1 (MQ=60)
ATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTA < SRR4302534.3909662/94‑1 (MQ=60)
ATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTA < SRR4302534.3392516/94‑1 (MQ=60)
ATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTA < SRR4302534.2621720/94‑1 (MQ=60)
AAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACG < SRR4302534.5848701/94‑1 (MQ=60)
AAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACG < SRR4302534.3318637/94‑1 (MQ=60)
AAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGC > SRR4302534.4365456/1‑94 (MQ=60)
AAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCG < SRR4302534.4456508/94‑1 (MQ=60)
AAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCG < SRR4302534.6278902/94‑1 (MQ=60)
AACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGA > SRR4302534.3314337/1‑94 (MQ=60)
ACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGAT > SRR4302534.1821456/1‑94 (MQ=60)
CCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACATAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACC < SRR4302534.5330999/94‑1 (MQ=60)
CCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACC < SRR4302534.5312499/94‑1 (MQ=60)
CGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCA > SRR4302534.4341024/1‑94 (MQ=60)
GATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCAT < SRR4302534.3375197/94‑1 (MQ=60)
GATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCAT > SRR4302534.2549621/1‑94 (MQ=60)
GATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCAT < SRR4302534.447774/94‑1 (MQ=60)
ATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATA < SRR4302534.877842/94‑1 (MQ=60)
ATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATA > SRR4302534.1836457/1‑94 (MQ=60)
TGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAA > SRR4302534.5396835/1‑94 (MQ=60)
TGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAA > SRR4302534.2275970/1‑94 (MQ=60)
TGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAA < SRR4302534.3730161/94‑1 (MQ=60)
GGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAAT < SRR4302534.2200757/94‑1 (MQ=60)
CTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGT > SRR4302534.1177258/1‑94 (MQ=60)
TTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTC > SRR4302534.2855090/1‑94 (MQ=60)
TCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCA < SRR4302534.5578198/94‑1 (MQ=60)
TCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCA < SRR4302534.3797807/94‑1 (MQ=60)
TCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCA < SRR4302534.685707/94‑1 (MQ=60)
CGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAG < SRR4302534.2352967/94‑1 (MQ=60)
CGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAG < SRR4302534.3762740/94‑1 (MQ=60)
CGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAG < SRR4302534.203148/94‑1 (MQ=60)
CGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAG > SRR4302534.3372637/1‑94 (MQ=60)
CGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAG > SRR4302534.404179/1‑94 (MQ=60)
TTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAG < SRR4302534.5821924/94‑1 (MQ=60)
TTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAG > SRR4302534.435/1‑94 (MQ=60)
TTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAG > SRR4302534.1627474/1‑94 (MQ=60)
TAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGT > SRR4302534.1869641/1‑94 (MQ=60)
TAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGT < SRR4302534.4575191/94‑1 (MQ=60)
AAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTC > SRR4302534.3622181/1‑94 (MQ=60)
AAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTC < SRR4302534.540872/94‑1 (MQ=60)
AAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTC > SRR4302534.1953366/1‑94 (MQ=60)
AGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCA > SRR4302534.1618602/1‑94 (MQ=60)
AGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCA < SRR4302534.2604917/94‑1 (MQ=60)
AGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCA > SRR4302534.6371502/1‑94 (MQ=60)
AGTCTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCA < SRR4302534.954268/94‑1 (MQ=60)
GTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAG > SRR4302534.4225978/1‑94 (MQ=60)
GTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAG < SRR4302534.2431309/94‑1 (MQ=60)
TGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGC < SRR4302534.4797335/94‑1 (MQ=60)
GTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCTATACCATAATGTCAGAGTCAGCG < SRR4302534.754355/94‑1 (MQ=60)
GTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCG > SRR4302534.2357023/1‑94 (MQ=60)
GTTAGTCCATGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCG > SRR4302534.6301129/1‑94 (MQ=60)
TTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATCCCATAATGTCAGAGTCAGCGT < SRR4302534.3240871/94‑1 (MQ=60)
TAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACTATGCGGCGCGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTA > SRR4302534.3720677/1‑94 (MQ=60)
TAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTA > SRR4302534.5917958/1‑94 (MQ=60)
AGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTAC > SRR4302534.3009625/1‑94 (MQ=60)
AGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTAC > SRR4302534.3137055/1‑94 (MQ=60)
TCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTGAGCGTACTG > SRR4302534.6196817/1‑94 (MQ=60)
TCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTG < SRR4302534.584314/94‑1 (MQ=60)
CCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGA < SRR4302534.3242840/94‑1 (MQ=60)
CCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGA < SRR4302534.5061356/94‑1 (MQ=60)
CCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACCGA < SRR4302534.6345844/94‑1 (MQ=60)
CAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGCACTGACGCCC > SRR4302534.3335126/1‑94 (MQ=60)
AATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCA > SRR4302534.2446282/1‑94 (MQ=60)
TCCGGTGCCCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATT < SRR4302534.6588006/94‑1 (MQ=60)
TCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATT > SRR4302534.5805148/1‑94 (MQ=60)
CCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTG < SRR4302534.3155902/94‑1 (MQ=60)
CCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTG < SRR4302534.6636525/94‑1 (MQ=60)
CCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGGACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTG > SRR4302534.5573304/1‑94 (MQ=60)
CGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGC > SRR4302534.4365726/1‑94 (MQ=60)
TGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGACAGCGTACTGACGCCCATTGCCAG > SRR4302534.80226/1‑94 (MQ=60)
GACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGC > SRR4302534.4905293/1‑94 (MQ=60)
ACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGTC > SRR4302534.5817756/1‑94 (MQ=60)
ACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCC > SRR4302534.326867/1‑94 (MQ=60)
ACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCC < SRR4302534.2338509/94‑1 (MQ=60)
acctgttctCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCC > SRR4302534.2683542/10‑94 (MQ=60)
CAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCC > SRR4302534.1671956/1‑94 (MQ=60)
AACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCA < SRR4302534.352380/94‑1 (MQ=60)
AACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCA > SRR4302534.2613363/1‑94 (MQ=60)
ACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCGCCAG > SRR4302534.2848120/1‑94 (MQ=60)
ACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAG < SRR4302534.625725/94‑1 (MQ=60)
ACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAG < SRR4302534.3481190/94‑1 (MQ=60)
AAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCG > SRR4302534.2660563/1‑94 (MQ=60)
AAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCG > SRR4302534.1403793/1‑94 (MQ=60)
AAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCG > SRR4302534.1109890/1‑94 (MQ=60)
AAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACTCCCATTGCCATCCCCAGCGC < SRR4302534.6479873/94‑1 (MQ=60)
AGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCC > SRR4302534.1443432/1‑94 (MQ=60)
AGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCC < SRR4302534.1701740/94‑1 (MQ=60)
AGCCGCGCAAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCC < SRR4302534.390295/94‑1 (MQ=60)
GCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCATCCCCAGAGCCG > SRR4302534.5612604/1‑94 (MQ=60)
CCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGT > SRR4302534.5762856/1‑94 (MQ=60)
CCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCA < SRR4302534.1173375/94‑1 (MQ=60)
GCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATC > SRR4302534.3878179/1‑94 (MQ=60)
CCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCC > SRR4302534.1979817/1‑94 (MQ=60)
CCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCC < SRR4302534.1165928/94‑1 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA > SRR4302534.1160123/1‑94 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA > SRR4302534.5185045/1‑94 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA > SRR4302534.5530360/1‑94 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA < SRR4302534.4886059/94‑1 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA > SRR4302534.475220/1‑94 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA < SRR4302534.1829475/94‑1 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA < SRR4302534.5680633/94‑1 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA < SRR4302534.4388223/94‑1 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA < SRR4302534.1651373/94‑1 (MQ=60)
CAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCA < SRR4302534.1764756/94‑1 (MQ=60)
AGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAG > SRR4302534.771455/1‑94 (MQ=60)
AGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAG > SRR4302534.805138/1‑94 (MQ=60)
GGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGC < SRR4302534.2372708/94‑1 (MQ=60)
GGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGC > SRR4302534.2286784/1‑94 (MQ=60)
GGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGC > SRR4302534.4145186/1‑94 (MQ=60)
CGTAGACAATGCGGCGAGAACAGGTACGCGATACCATAATGTTAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCA < SRR4302534.2697876/94‑1 (MQ=60)
GTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAG < SRR4302534.4408414/94‑1 (MQ=60)
GTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAG < SRR4302534.5144415/94‑1 (MQ=60)
GTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGCCAGCGTACTGACGCGCATTGACCGAGCCAGCGCCGTCATCCAGCCAG > SRR4302534.5194613/1‑94 (MQ=60)
TTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGA < SRR4302534.4295666/94‑1 (MQ=60)
TTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGA > SRR4302534.2478749/1‑94 (MQ=60)
GACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGA > SRR4302534.564725/1‑94 (MQ=60)
GACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGA < SRR4302534.2383938/94‑1 (MQ=60)
ACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCACAGCGCCGTCATCCAGCCAGAGAT > SRR4302534.6513459/1‑94 (MQ=60)
CATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTT < SRR4302534.2322116/94‑1 (MQ=60)
CATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTT > SRR4302534.3300929/1‑94 (MQ=60)
CATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTT > SRR4302534.6310488/1‑94 (MQ=60)
CATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTT > SRR4302534.5244406/1‑94 (MQ=60)
CATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTT > SRR4302534.4369315/1‑94 (MQ=60)
ATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTG > SRR4302534.4958361/1‑94 (MQ=60)
CGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGC > SRR4302534.5196549/1‑94 (MQ=60)
GGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCA < SRR4302534.6644210/94‑1 (MQ=60)
GCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAG > SRR4302534.3021341/1‑94 (MQ=60)
GCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAG < SRR4302534.3752144/94‑1 (MQ=60)
GCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAG < SRR4302534.5920699/94‑1 (MQ=60)
GCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAA < SRR4302534.3806294/94‑1 (MQ=60)
CGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGT > SRR4302534.3079464/1‑94 (MQ=60)
CGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGT < SRR4302534.4045240/94‑1 (MQ=60)
|
CGTTGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGTGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGT > NC_000913/1503801‑1503987
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
