Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,679,869 |
A→G |
S62S (AGT→AGC) |
ydgC ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,679,869 | 0 | A | G | 100.0%
| 740.1
/ NA
| 208 | S62S (AGT→AGC) | ydgC | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/104); total (104/104) |
Only 100 of 209 total aligned reads displayed.
AGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGG > NC_000913/1679779‑1679958
|
gAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTa > 2:1924996/1‑93 (MQ=255)
aaCCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTaa < 2:212234/93‑1 (MQ=255)
aCCAACAAAAGCGGCGGGCAAGCGCATTATTCCGGTGAAATACCACAGCGACACCAGGTAAACCAAATAGGGAATAATCGACCACATGCTaaa > 1:3974291/1‑93 (MQ=255)
aCCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAAACGACCACATGCTaaa > 1:1274493/1‑93 (MQ=255)
caacaaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTaaaaa > 1:1666952/1‑93 (MQ=255)
caacaaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTaaaaa < 2:4885020/93‑1 (MQ=255)
aacaaAAGCGGCGGGCAAGCGGATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAat > 1:4094226/1‑93 (MQ=255)
aacaaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAat < 2:5893204/93‑1 (MQ=255)
caaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGAGCACATGCTAAAAatga > 2:3367148/1‑93 (MQ=255)
caaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAatga > 2:1041056/1‑93 (MQ=255)
aaaaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAatgat < 1:534694/93‑1 (MQ=255)
aaaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAGTCGACCACATGCTAAAAatgatg < 1:5217483/93‑1 (MQ=255)
aaaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAatgatg < 1:1840982/93‑1 (MQ=255)
aaaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAatgatg > 2:6409685/1‑93 (MQ=255)
aaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATgg > 1:4662917/1‑93 (MQ=255)
aGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGt < 2:181075/93‑1 (MQ=255)
aGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGt < 1:1143474/93‑1 (MQ=255)
gcggcgGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGtt < 1:4844062/93‑1 (MQ=255)
cggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTg < 2:5243735/93‑1 (MQ=255)
cggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTg < 2:2879328/93‑1 (MQ=255)
ggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTgc < 2:2276614/93‑1 (MQ=255)
ggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTgc < 1:1895228/93‑1 (MQ=255)
ggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTgc < 2:4121810/93‑1 (MQ=255)
ggCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGt > 1:3327607/1‑93 (MQ=255)
ggCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGt > 2:3229315/1‑93 (MQ=255)
ggCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGt > 1:6257912/1‑93 (MQ=255)
ggCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGt > 1:4938286/1‑93 (MQ=255)
gCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTa < 2:4601376/93‑1 (MQ=255)
cAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTaa < 2:513500/93‑1 (MQ=255)
aGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAgg > 1:360374/1‑93 (MQ=255)
aGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAgg > 2:567367/1‑93 (MQ=255)
cgcATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCt < 2:4212608/93‑1 (MQ=255)
cgcATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCt < 2:3027295/93‑1 (MQ=255)
cgcATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCt < 2:5332172/93‑1 (MQ=255)
catcatTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTc > 1:308408/1‑93 (MQ=255)
catcatTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTc < 2:4724841/93‑1 (MQ=255)
tcatTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCaa > 1:564969/1‑93 (MQ=255)
ttCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGc > 1:4600336/1‑93 (MQ=255)
ccGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCcg < 2:83936/93‑1 (MQ=255)
gTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGt > 2:1737875/1‑93 (MQ=255)
gTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGt > 1:1377911/1‑93 (MQ=255)
tGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGtt < 1:5838775/93‑1 (MQ=255)
tGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGtt > 1:5871031/1‑93 (MQ=255)
tGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGtt < 1:2572544/93‑1 (MQ=255)
gAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTc > 2:5805838/1‑93 (MQ=255)
aaaTACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCg < 1:2356266/93‑1 (MQ=255)
aTACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCt < 2:1345803/93‑1 (MQ=255)
aTACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCt < 1:2043551/93‑1 (MQ=255)
ccACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGc < 1:4429828/93‑1 (MQ=255)
aGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGcaaca > 1:4124532/1‑93 (MQ=255)
cGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAat < 1:2700546/93‑1 (MQ=255)
acacCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAatat < 2:2964790/93‑1 (MQ=255)
ccAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAAt > 2:5583674/1‑93 (MQ=255)
cAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATg > 1:155537/1‑93 (MQ=255)
aGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATgc > 2:1655611/1‑93 (MQ=255)
aGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATgc > 1:4294261/1‑93 (MQ=255)
tAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGcgcg < 2:6088311/93‑1 (MQ=255)
tAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGcgcg > 1:5175529/1‑93 (MQ=255)
aaCAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGAt > 1:3723592/1‑93 (MQ=255)
aaCAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGAt > 1:5418791/1‑93 (MQ=255)
aaCAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGAt > 2:3543362/1‑93 (MQ=255)
aCAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATa < 1:74010/93‑1 (MQ=255)
cAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATaa < 1:1569625/93‑1 (MQ=255)
aaaaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAg > 2:5953417/1‑93 (MQ=255)
aaaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgc > 2:1091979/1‑93 (MQ=255)
aaaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgc < 1:1166741/93‑1 (MQ=255)
aaaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgc < 1:2894738/93‑1 (MQ=255)
aaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGAGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAacg > 1:4354509/1‑93 (MQ=255)
aTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgcgc < 2:1276497/93‑1 (MQ=255)
aTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgcgc > 1:3275427/1‑93 (MQ=255)
tAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCa > 2:2420862/1‑93 (MQ=255)
aGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCaa > 2:2663069/1‑93 (MQ=255)
aGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCaa > 2:5056648/1‑93 (MQ=255)
aGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCaa > 1:2613401/1‑93 (MQ=255)
ggAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCTCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAg < 1:4466920/93‑1 (MQ=255)
ggAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAg > 1:1043523/1‑93 (MQ=255)
ggAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAg > 1:4505457/1‑93 (MQ=255)
gAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAgg < 1:3117000/93‑1 (MQ=255)
aataatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGt < 2:2646987/93‑1 (MQ=255)
aataatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGt > 2:571680/1‑93 (MQ=255)
ataatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTc > 1:2134767/1‑93 (MQ=255)
ataatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTc > 2:5228639/1‑93 (MQ=255)
acaatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTc < 1:6424659/91‑1 (MQ=255)
aatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCgg < 1:5030253/93‑1 (MQ=255)
aatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCgg < 2:360375/93‑1 (MQ=255)
aatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCgg < 2:5397345/93‑1 (MQ=255)
atCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCggg < 2:343109/93‑1 (MQ=255)
atCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCggg < 1:2985299/93‑1 (MQ=255)
atCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAACGCGCGATAAGCGCAAAGGTCggg < 1:6174662/93‑1 (MQ=255)
gACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGaaa > 2:3834003/1‑93 (MQ=255)
aCCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGaaaa < 1:6311497/93‑1 (MQ=255)
aCCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGaaaa > 2:3879748/1‑93 (MQ=255)
ccACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAg > 1:987059/1‑93 (MQ=255)
ccACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAg < 2:2501659/93‑1 (MQ=255)
ccACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAg < 2:3208539/93‑1 (MQ=255)
cacaTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGt > 2:1197791/1‑93 (MQ=255)
acaTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTg > 2:442086/1‑93 (MQ=255)
acaTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTg > 2:6329010/1‑93 (MQ=255)
acaTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTg > 2:6337211/1‑93 (MQ=255)
caTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTgg < 1:5599711/93‑1 (MQ=255)
|
AGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGG > NC_000913/1679779‑1679958
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATC > NC_000913/1679778‑1679962
|
CAGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCT < SRR4302534.6288672/94‑1 (MQ=60)
AGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTA > SRR4302534.4085162/1‑94 (MQ=60)
AGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTA < SRR4302534.1934204/94‑1 (MQ=60)
AACCAACAAAAGCGGCGGGCAAGCGCATTATTCCGGTGAAATACCACAGCGACACCAGGTAAACCAAATAGGGAATAATCGACCACATGCTAAA > SRR4302534.4080660/1‑94 (MQ=60)
AACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAA < SRR4302534.3403424/94‑1 (MQ=60)
AACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAA > SRR4302534.3865626/1‑94 (MQ=60)
AACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAA > SRR4302534.1950617/1‑94 (MQ=60)
AACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAAACGACCACATGCTAAA > SRR4302534.1308038/1‑94 (MQ=60)
ACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAA > SRR4302534.5472092/1‑94 (MQ=60)
ACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAA < SRR4302534.1669097/94‑1 (MQ=60)
ACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAA > SRR4302534.3751863/1‑94 (MQ=60)
CCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAA > SRR4302534.1710333/1‑94 (MQ=60)
CAACAAAAGCGGCGGGCAAGCGGATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAAT > SRR4302534.4204252/1‑94 (MQ=60)
CAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGAT > SRR4302534.3073389/1‑94 (MQ=60)
AAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATG < SRR4302534.547964/94‑1 (MQ=60)
AAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATG > SRR4302534.5545187/1‑94 (MQ=60)
AAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAGTCGACCACATGCTAAAAATGATGG < SRR4302534.5358308/94‑1 (MQ=60)
AAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGG > SRR4302534.4789518/1‑94 (MQ=60)
AAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGG < SRR4302534.1888833/94‑1 (MQ=60)
AAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACCTGCTAAAAATGATGGT > SRR4302534.6560869/1‑94 (MQ=60)
AGCGGCGGGCAAGCGCATCATTCCGGTGAAATGCCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTT < SRR4302534.4904/94‑1 (MQ=60)
AGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACTACATGCTAAAAATGATGGTT < SRR4302534.6455733/94‑1 (MQ=60)
AGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTT < SRR4302534.1173413/94‑1 (MQ=60)
GCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTG < SRR4302534.1019543/94‑1 (MQ=60)
GCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTG < SRR4302534.4975494/94‑1 (MQ=60)
GCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTG < SRR4302534.600369/94‑1 (MQ=60)
CGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGC < SRR4302534.160898/94‑1 (MQ=60)
GGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCG > SRR4302534.1176592/1‑94 (MQ=60)
GGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCG > SRR4302534.4977658/1‑94 (MQ=60)
GGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCG < SRR4302534.1944666/94‑1 (MQ=60)
GGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGT > SRR4302534.6427490/1‑94 (MQ=60)
GGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGT > SRR4302534.5072093/1‑94 (MQ=60)
GGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGT > SRR4302534.3416600/1‑94 (MQ=60)
GCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAA > SRR4302534.5594796/1‑94 (MQ=60)
GCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAA < SRR4302534.3186515/94‑1 (MQ=60)
CAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAG > SRR4302534.1361552/1‑94 (MQ=60)
AAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGG > SRR4302534.1102643/1‑94 (MQ=60)
AAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGG > SRR4302534.369560/1‑94 (MQ=60)
AGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGCAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGC > SRR4302534.4965183/1‑94 (MQ=60)
GCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCT < SRR4302534.2254303/94‑1 (MQ=60)
GCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCT > SRR4302534.2690304/1‑94 (MQ=60)
CGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTT > SRR4302534.2857750/1‑94 (MQ=60)
GCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTC > SRR4302534.316376/1‑94 (MQ=60)
GCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTC < SRR4302534.2478039/94‑1 (MQ=60)
CATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCA < SRR4302534.5268955/94‑1 (MQ=60)
ATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAA > SRR4302534.578860/1‑94 (MQ=60)
TCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAAT < SRR4302534.4529480/94‑1 (MQ=60)
ATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGC > SRR4302534.4725195/1‑94 (MQ=60)
TCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCG < SRR4302534.4414480/94‑1 (MQ=60)
TCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGACG > SRR4302534.5925858/1‑94 (MQ=60)
CCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGC > SRR4302534.6373720/1‑94 (MQ=60)
CCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGC < SRR4302534.4409262/94‑1 (MQ=60)
GGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGT > SRR4302534.1414208/1‑94 (MQ=60)
GTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTT < SRR4302534.4665322/94‑1 (MQ=60)
GTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTT < SRR4302534.1884978/94‑1 (MQ=60)
GTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTT > SRR4302534.6030441/1‑94 (MQ=60)
TGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTC < SRR4302534.2640712/94‑1 (MQ=60)
TGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTC < SRR4302534.5997279/94‑1 (MQ=60)
TGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTC > SRR4302534.4229928/1‑94 (MQ=60)
AAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGC < SRR4302534.2418796/94‑1 (MQ=60)
ATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTG < SRR4302534.3021220/94‑1 (MQ=60)
ATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTG < SRR4302534.2096966/94‑1 (MQ=60)
CCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCA < SRR4302534.4549436/94‑1 (MQ=60)
ACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAAC < SRR4302534.6124535/94‑1 (MQ=60)
CAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACA > SRR4302534.4235553/1‑94 (MQ=60)
CGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATA < SRR4302534.4572988/94‑1 (MQ=60)
CGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATA < SRR4302534.2771886/94‑1 (MQ=60)
GACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATAT > SRR4302534.6334/1‑94 (MQ=60)
CCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATG > SRR4302534.159608/1‑94 (MQ=60)
CCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATG > SRR4302534.1267011/1‑94 (MQ=60)
CAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGC > SRR4302534.4410620/1‑94 (MQ=60)
AGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCG < SRR4302534.3301358/94‑1 (MQ=60)
GTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCG > SRR4302534.5314993/1‑94 (MQ=60)
AAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGAT > SRR4302534.5564592/1‑94 (MQ=60)
AAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGAT > SRR4302534.3823673/1‑94 (MQ=60)
AACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATA < SRR4302534.2153729/94‑1 (MQ=60)
AACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATA < SRR4302534.5330650/94‑1 (MQ=60)
ACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAA < SRR4302534.76019/94‑1 (MQ=60)
CAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAG > SRR4302534.3720118/1‑94 (MQ=60)
CAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAG < SRR4302534.1610732/94‑1 (MQ=60)
AAATATGGAATAACCGGCCACATCCTAAAAGTGATGGTTGGGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCG < SRR4302534.688591/94‑1 (MQ=60)
AAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCG < SRR4302534.2970725/94‑1 (MQ=60)
AAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCG < SRR4302534.1197385/94‑1 (MQ=60)
AAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGAGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAACG > SRR4302534.4472049/1‑94 (MQ=60)
AATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGC > SRR4302534.3362718/1‑94 (MQ=60)
TAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAA > SRR4302534.2682561/1‑94 (MQ=60)
TAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAA > SRR4302534.1558845/1‑94 (MQ=60)
AGGGAATAATCGCGCACATGCTAAAAATGATGGTTGCGCGTAAGCCTTCATTGCCAAGTTCGCTGGCAACAATATAATGCGCGCTAAGCGCCAA < SRR4302534.3263939/94‑1 (MQ=57)
GGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAG < SRR4302534.514042/94‑1 (MQ=60)
GGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAG > SRR4302534.1070471/1‑94 (MQ=60)
GGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAG > SRR4302534.4627429/1‑94 (MQ=60)
GGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAG < SRR4302534.4614804/94‑1 (MQ=60)
GGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCTCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGG < SRR4302534.4587711/94‑1 (MQ=60)
GAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGT < SRR4302534.3198956/94‑1 (MQ=60)
AATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTC > SRR4302534.2191051/1‑94 (MQ=60)
ATAATCGCCCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCG < SRR4302534.2343337/94‑1 (MQ=60)
ATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCG < SRR4302534.5752230/94‑1 (MQ=60)
ACAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCG < SRR4302534.6597924/94‑1 (MQ=60)
AATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGG > SRR4302534.6635585/1‑94 (MQ=60)
AATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGG < SRR4302534.5166128/94‑1 (MQ=60)
ATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGA < SRR4302534.3063378/94‑1 (MQ=60)
ATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAACGCGCGATAAGCGCAAAGGTCGGGA < SRR4302534.6342665/94‑1 (MQ=60)
CGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAA > SRR4302534.772670/1‑94 (MQ=60)
GACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAA > SRR4302534.4734628/1‑94 (MQ=60)
ACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAG < SRR4302534.6482118/94‑1 (MQ=60)
ACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAG > SRR4302534.1012288/1‑94 (MQ=60)
CCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGG > SRR4302534.2641613/1‑94 (MQ=60)
CACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTG < SRR4302534.345578/94‑1 (MQ=60)
CATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGA < SRR4302534.5751134/94‑1 (MQ=60)
GCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATC < SRR4302534.197126/94‑1 (MQ=60)
GCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATC < SRR4302534.2280729/94‑1 (MQ=60)
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CAGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATC > NC_000913/1679778‑1679962
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
