Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,681,154 |
T→C |
S83S (AGT→AGC) |
rstB → |
sensor histidine protein kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,681,154 | 0 | T | C | 100.0%
| 768.2
/ NA
| 217 | S83S (AGT→AGC) | rstB | sensor histidine protein kinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/105); total (112/105) |
Only 100 of 219 total aligned reads displayed.
ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAT > NC_000913/1681064‑1681243
|
aTTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCaa < 1:4963013/93‑1 (MQ=255)
ttGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCaaa > 1:1576359/1‑93 (MQ=255)
ttGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCaaa > 2:1568936/1‑93 (MQ=255)
cGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATAc < 2:316267/93‑1 (MQ=255)
cGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATAc < 1:5263095/93‑1 (MQ=255)
tGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCa < 1:4691429/93‑1 (MQ=255)
gagaCCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCAt < 1:1949122/93‑1 (MQ=255)
agaTCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATc > 1:4262944/1‑93 (MQ=255)
gaTCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCt > 2:6189509/1‑93 (MQ=255)
aTCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCtt < 2:3035578/93‑1 (MQ=255)
tCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtg > 2:2916909/1‑93 (MQ=255)
tCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtg > 1:222493/1‑93 (MQ=255)
cccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCACATACCATCTtgat > 1:1668738/1‑93 (MQ=255)
cccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgat < 2:6446070/93‑1 (MQ=255)
ccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatg < 1:6012194/93‑1 (MQ=255)
ccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatg > 1:261398/1‑93 (MQ=255)
ccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatg > 2:1176938/1‑93 (MQ=255)
cccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatga < 1:5418147/93‑1 (MQ=255)
ccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTgatgat > 2:2514584/1‑93 (MQ=255)
acacGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGatat > 1:4347705/1‑93 (MQ=255)
acacGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGatat < 2:1702240/93‑1 (MQ=255)
acacGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCAGTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGatat < 2:637469/93‑1 (MQ=255)
cacGACTGGGGTAAAGCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATAtt < 1:5952641/93‑1 (MQ=255)
acGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCAATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATAttt < 1:2460796/93‑1 (MQ=255)
cGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTc < 2:3410829/93‑1 (MQ=255)
cTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCAt < 2:226057/93‑1 (MQ=255)
tGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATg < 2:3699497/93‑1 (MQ=255)
ggggTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCTATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGc < 2:2824614/93‑1 (MQ=255)
gggTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCa < 2:5892654/93‑1 (MQ=255)
gggTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCa > 2:2727709/1‑93 (MQ=255)
ggTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAc < 2:2385780/93‑1 (MQ=255)
ggTAAAACTCTGAAAGAGATGGATTTAAACCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAc < 2:221885/93‑1 (MQ=255)
gTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAcc < 1:3589468/93‑1 (MQ=255)
gTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAcc > 1:5659121/1‑93 (MQ=255)
tAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCg > 1:5822756/1‑93 (MQ=255)
aaaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGa > 2:2114317/1‑93 (MQ=255)
aaaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGa > 1:3950027/1‑93 (MQ=255)
aaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAc > 1:149987/1‑93 (MQ=255)
aaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAc < 2:5128575/93‑1 (MQ=255)
aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt < 1:5785867/93‑1 (MQ=255)
aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt > 1:3889270/1‑93 (MQ=255)
aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt < 1:4742513/93‑1 (MQ=255)
aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt < 2:4913181/93‑1 (MQ=255)
aCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTg > 2:5066226/1‑93 (MQ=255)
aCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTg < 1:1109093/93‑1 (MQ=255)
aCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTg > 2:5368373/1‑93 (MQ=255)
ctctGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGc > 1:1770670/1‑93 (MQ=255)
tctGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTTGAGTCACTGAGCAAATACCATCTTGATGATATTTCCATACACCGACcgcg > 1:4568593/1‑93 (MQ=255)
ctGAAAGAGATGGATTTAAATCTTTCTTTCGGTCTGCGTGGCGAGCAACTGAGCAAATACCATCTTGATGATATTTCCATGCATCGACTGCGt < 1:3061037/93‑1 (MQ=255)
ctGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGt < 2:4136835/93‑1 (MQ=255)
gAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTgg > 2:5231634/1‑93 (MQ=255)
aaaGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggc > 2:665380/1‑93 (MQ=255)
aaaGAGAGGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggc < 2:4570714/93‑1 (MQ=255)
agagATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcgg < 1:690707/93‑1 (MQ=255)
agagATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcgg > 1:651502/1‑93 (MQ=255)
gagaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcggc < 1:3429418/93‑1 (MQ=255)
agaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg > 1:6114810/1‑93 (MQ=255)
agaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg < 1:2421023/93‑1 (MQ=255)
agaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg > 2:4397750/1‑93 (MQ=255)
tttAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGGAATTGt > 2:1650962/1‑93 (MQ=255)
tttAAATCGCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGt < 1:5358690/93‑1 (MQ=255)
aTCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGccc < 1:2077708/93‑1 (MQ=255)
aTCTCTCTTGCGATCTGCATGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGccc < 2:3953251/93‑1 (MQ=255)
tctctcTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCt < 1:4114258/93‑1 (MQ=255)
tctctcTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCt < 1:5092788/93‑1 (MQ=255)
tctctcTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCt < 2:2447528/93‑1 (MQ=255)
ttctttTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTg < 2:1995782/92‑1 (MQ=255)
ctctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTg < 2:4321896/93‑1 (MQ=255)
ctctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTg < 2:6300592/93‑1 (MQ=255)
tctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTgg > 2:5818961/1‑93 (MQ=255)
ctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTggc > 2:3737465/1‑92 (MQ=255)
ctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGa > 1:4378246/1‑93 (MQ=255)
ttCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGAt < 2:1318366/93‑1 (MQ=255)
tCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATc > 2:3768689/1‑93 (MQ=255)
tCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATc > 2:216781/1‑93 (MQ=255)
tCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATc > 2:198076/1‑93 (MQ=255)
cGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCa < 1:3187960/93‑1 (MQ=255)
cGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCa > 2:2552978/1‑93 (MQ=255)
cGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCa > 1:6430614/1‑93 (MQ=255)
aTCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGt < 1:3826439/93‑1 (MQ=255)
aTCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGt > 2:4000663/1‑93 (MQ=255)
tCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTa > 1:5078703/1‑93 (MQ=255)
cTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTac < 2:332508/93‑1 (MQ=255)
gCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTacac < 1:832784/93‑1 (MQ=255)
tgtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGtt < 2:900093/93‑1 (MQ=255)
gtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGttt < 1:2786560/93‑1 (MQ=255)
gtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGttt < 2:6029885/93‑1 (MQ=255)
gacGAGCCACTGAGCAAATCCCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATCGTCGCCCTGGACGATCAGTACACGttt < 1:4107747/91‑1 (MQ=255)
cGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGttttt < 2:1428966/93‑1 (MQ=255)
gAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTg > 2:796376/1‑93 (MQ=255)
gAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTg > 1:3225098/1‑93 (MQ=255)
aGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGc > 2:3082/1‑93 (MQ=255)
aGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGc > 2:3097842/1‑93 (MQ=255)
aGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGc < 1:3667293/93‑1 (MQ=255)
aGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGc > 2:2840318/1‑93 (MQ=255)
aCTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGTAgtg > 1:5240607/1‑91 (MQ=255)
aCTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCg > 2:1743004/1‑93 (MQ=255)
aCTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCg < 2:1010133/93‑1 (MQ=255)
tGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTa < 1:4861138/93‑1 (MQ=255)
gAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAt < 1:2908143/93‑1 (MQ=255)
|
ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAT > NC_000913/1681064‑1681243
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTATCCCG > NC_000913/1681061‑1681247
|
CGAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGCAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGC < SRR4302534.6551688/94‑1 (MQ=60)
CGAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGC > SRR4302534.6328963/1‑94 (MQ=60)
CGAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGC > SRR4302534.5657160/1‑94 (MQ=60)
GAATTGCGTTAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCA > SRR4302534.6473456/1‑94 (MQ=60)
GAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCA > SRR4302534.5987676/1‑94 (MQ=60)
GAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCA > SRR4302534.5603367/1‑94 (MQ=60)
AATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAA < SRR4302534.4784763/94‑1 (MQ=60)
ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAA > SRR4302534.1617601/1‑94 (MQ=60)
ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAA < SRR4302534.5032658/94‑1 (MQ=60)
ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAA < SRR4302534.5097384/94‑1 (MQ=60)
tccggcgatctccccacgcggCTGGGATAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATAC < SRR4302534.1397781/73‑1 (MQ=60)
CGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACC < SRR4302534.5171066/94‑1 (MQ=60)
CGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACC < SRR4302534.5405277/94‑1 (MQ=60)
TGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCAT < SRR4302534.4818776/94‑1 (MQ=60)
GAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATC > SRR4302534.4378079/1‑94 (MQ=60)
GAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATC < SRR4302534.1719813/94‑1 (MQ=60)
GAGACCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATC < SRR4302534.2000138/94‑1 (MQ=60)
AGATCCCCCCATACGACTGGGGGAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCT > SRR4302534.5801338/1‑94 (MQ=60)
AGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCT > SRR4302534.5552488/1‑94 (MQ=60)
AGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCT > SRR4302534.5559268/1‑94 (MQ=60)
GATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTT < SRR4302534.1963338/94‑1 (MQ=60)
ATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTG > SRR4302534.228315/1‑94 (MQ=60)
TCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGA > SRR4302534.2442302/1‑94 (MQ=60)
TCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGA < SRR4302534.4564795/94‑1 (MQ=60)
CCCCCCACACGACTGGGGTAAACCTCGGAAAGAGATGGATTTAAAGCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGAT < SRR4302534.2234675/94‑1 (MQ=60)
CCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCACATACCATCTTGAT > SRR4302534.1712170/1‑94 (MQ=60)
CCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATG > SRR4302534.4000727/1‑94 (MQ=60)
CCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATG < SRR4302534.2945114/94‑1 (MQ=60)
CCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATG > SRR4302534.268188/1‑94 (MQ=60)
CCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGA < SRR4302534.6175556/94‑1 (MQ=60)
CCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGA > SRR4302534.4140748/1‑94 (MQ=60)
CCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGAT < SRR4302534.5563921/94‑1 (MQ=60)
CCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGAT < SRR4302534.1541823/94‑1 (MQ=60)
CACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATAT > SRR4302534.4465099/1‑94 (MQ=60)
CACGACTGGGGTAAAGCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTT < SRR4302534.6114274/94‑1 (MQ=60)
ACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTC < SRR4302534.5360797/94‑1 (MQ=60)
ACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCAATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTC < SRR4302534.2526172/94‑1 (MQ=60)
GACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCA < SRR4302534.6254198/94‑1 (MQ=60)
TGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCCATCTGCGTGTCGAGCCACTTAGTAAATACCATCTTGATGATATTTCCATGC > SRR4302534.4490317/1‑94 (MQ=60)
GGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACC > SRR4302534.5812328/1‑94 (MQ=60)
GTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCG > SRR4302534.5980803/1‑94 (MQ=60)
GTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCG < SRR4302534.3686009/94‑1 (MQ=60)
TAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGA > SRR4302534.5849516/1‑94 (MQ=60)
TAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGA > SRR4302534.4055775/1‑94 (MQ=60)
AAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAC > SRR4302534.4976325/1‑94 (MQ=60)
AAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAC > SRR4302534.153899/1‑94 (MQ=60)
AAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACT > SRR4302534.3993675/1‑94 (MQ=60)
AAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACT > SRR4302534.4754645/1‑94 (MQ=60)
AAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACT > SRR4302534.6220494/1‑94 (MQ=60)
AAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCAACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACT > SRR4302534.4245190/1‑94 (MQ=60)
AACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTG < SRR4302534.4871260/94‑1 (MQ=60)
AACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTG < SRR4302534.5942812/94‑1 (MQ=60)
ACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGC > SRR4302534.1816645/1‑94 (MQ=60)
ACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGC < SRR4302534.1138016/94‑1 (MQ=60)
ACTCTGAAAGAGATGGATTTAAATCTCTCTCTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGC < SRR4302534.4411445/94‑1 (MQ=60)
ATCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTTGAGTCACTGAGCAAATACCATCTTGATGATATTTCCATACACCGACCGCG > SRR4302534.4692451/1‑94 (MQ=60)
TCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGT > SRR4302534.2090229/1‑94 (MQ=60)
CTGAAAGAGATGGATTTAAATCTTTCTTTCGGTCTGCGTGGCGAGCAACTGAGCAAATACCATCTTGATGATATTTCCATGCATCGACTGCGTG < SRR4302534.3141367/94‑1 (MQ=60)
TGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGG < SRR4302534.377114/94‑1 (MQ=60)
AAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCG > SRR4302534.6086505/1‑94 (MQ=60)
AAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCA < SRR4302534.5228610/94‑1 (MQ=60)
AAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGG > SRR4302534.667326/1‑94 (MQ=60)
AAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGG > SRR4302534.3640626/1‑94 (MQ=60)
AGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGC < SRR4302534.707605/94‑1 (MQ=60)
GAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCG > SRR4302534.3094452/1‑94 (MQ=60)
GAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCG > SRR4302534.6281165/1‑94 (MQ=60)
AAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCG < SRR4302534.3521550/94‑1 (MQ=60)
AGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGA < SRR4302534.2485400/94‑1 (MQ=60)
AGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGA > SRR4302534.5948859/1‑94 (MQ=60)
ATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAA > SRR4302534.4517643/1‑94 (MQ=60)
GGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATT > SRR4302534.2086105/1‑94 (MQ=60)
GATTTAAATCTCTCTTTCGATCTGCGTGTTGAGCCACTGAGCCAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTG > SRR4302534.3492727/1‑94 (MQ=60)
TTTAAATCGCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTC < SRR4302534.5503133/94‑1 (MQ=60)
TAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGC > SRR4302534.5386192/1‑94 (MQ=60)
AATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCC > SRR4302534.3278705/1‑94 (MQ=60)
ATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCT < SRR4302534.2132107/94‑1 (MQ=60)
ATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCT < SRR4302534.2753983/94‑1 (MQ=60)
TCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTG < SRR4302534.4224944/94‑1 (MQ=60)
TCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTG < SRR4302534.6641420/94‑1 (MQ=60)
TCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTG < SRR4302534.5230256/94‑1 (MQ=60)
CTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGG < SRR4302534.688926/94‑1 (MQ=60)
TCTTTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGA < SRR4302534.2818856/94‑1 (MQ=60)
TCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGA > SRR4302534.4496261/1‑94 (MQ=60)
CTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGAC > SRR4302534.3141635/1‑94 (MQ=60)
CTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGAC < SRR4302534.2487356/94‑1 (MQ=60)
TCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACG > SRR4302534.6568110/1‑94 (MQ=60)
CTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGA > SRR4302534.3439957/1‑94 (MQ=60)
TTTCTATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGAT < SRR4302534.2642352/94‑1 (MQ=60)
TTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGAT < SRR4302534.898658/94‑1 (MQ=60)
TCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCA > SRR4302534.6603986/1‑94 (MQ=60)
CGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAG < SRR4302534.3272332/94‑1 (MQ=60)
CGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAG > SRR4302534.3697422/1‑94 (MQ=60)
ATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTA > SRR4302534.4834264/1‑94 (MQ=60)
ATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTA > SRR4302534.5215793/1‑94 (MQ=60)
ATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTA < SRR4302534.3929230/94‑1 (MQ=60)
TCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTAC < SRR4302534.747826/94‑1 (MQ=60)
GCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACG < SRR4302534.853729/94‑1 (MQ=60)
TGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTT < SRR4302534.967313/94‑1 (MQ=60)
GTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTT < SRR4302534.2859845/94‑1 (MQ=60)
GTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTT < SRR4302534.4218437/94‑1 (MQ=60)
GACGAGCCACTGAGCAAATCCCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATCGTCGCCCTGGACGATCAGTACACGTTTT < SRR4302534.4218235/94‑1 (MQ=60)
CGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTG > SRR4302534.1663848/1‑94 (MQ=60)
CGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTG > SRR4302534.3310764/1‑94 (MQ=60)
AGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCA > SRR4302534.3963443/1‑94 (MQ=60)
AGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCA < SRR4302534.3765865/94‑1 (MQ=60)
GCCACTGAGCAAATACCATCTTGATGATATTTCCATGCCCCGACTGCGTGGCGGCGAAATTATCGCCCTGGACGATCAGTACACGTTTTTGCCG < SRR4302534.6351908/94‑1 (MQ=60)
CCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGC > SRR4302534.5465682/1‑94 (MQ=60)
CCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGC > SRR4302534.610161/1‑94 (MQ=60)
TACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGtagtg > SRR4302534.5382110/1‑89 (MQ=60)
CACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCG > SRR4302534.5098641/1‑94 (MQ=60)
ACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGT > SRR4302534.4081325/1‑94 (MQ=60)
TGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAT < SRR4302534.4993011/94‑1 (MQ=60)
TGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAT > SRR4302534.1280106/1‑94 (MQ=60)
GAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTATC < SRR4302534.2984473/94‑1 (MQ=60)
AGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTATCC > SRR4302534.441388/1‑94 (MQ=60)
AGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTATCC < SRR4302534.1406249/94‑1 (MQ=60)
CAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTATCCCG > SRR4302534.850781/1‑94 (MQ=60)
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CGAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTATCCCG > NC_000913/1681061‑1681247
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
