Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,447,942 |
C→T |
V478I (GTC→ATC) |
tynA ← |
copper amine oxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,447,942 | 0 | C | T | 99.1%
| 820.9
/ ‑3.7
| 219 | V478I (GTC→ATC) | tynA | copper amine oxidase |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (113/104); total (115/104) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 226 total aligned reads displayed.
CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGC > NC_000913/1447852‑1448031
|
cGTTTGCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGt < 2:6093451/93‑1 (MQ=255)
ttttCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTg > 1:3159395/1‑93 (MQ=255)
ttCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTggg > 2:2591382/1‑93 (MQ=255)
tCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGc < 1:3562830/93‑1 (MQ=255)
cATGGAAGATCCAGTCATAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCt < 2:5474057/93‑1 (MQ=255)
aTGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTg > 1:3525793/1‑93 (MQ=255)
tGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTgg < 1:3967362/93‑1 (MQ=255)
aGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCa > 2:891727/1‑93 (MQ=255)
aGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCa < 2:5566093/93‑1 (MQ=255)
gATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAt < 1:967710/93‑1 (MQ=255)
gATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAt < 2:1119107/93‑1 (MQ=255)
aTCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAtt > 1:4998851/1‑93 (MQ=255)
gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg > 2:743296/1‑93 (MQ=255)
gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg < 1:1281678/93‑1 (MQ=255)
gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg > 1:1945411/1‑93 (MQ=255)
taaaaaaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGa < 1:1276753/91‑1 (MQ=255)
tCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGa < 2:4599530/93‑1 (MQ=255)
tCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGa < 1:1660082/93‑1 (MQ=255)
tCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGa > 1:919477/1‑93 (MQ=255)
tCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGa < 1:4847792/93‑1 (MQ=255)
cAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAt > 1:2328553/1‑93 (MQ=255)
aaaaaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATg > 1:2591098/1‑93 (MQ=255)
aaaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCt > 1:5651705/1‑93 (MQ=255)
aaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt > 2:410350/1‑93 (MQ=255)
aaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt > 2:2120163/1‑93 (MQ=255)
aaTGTAGTCATAGTTACCAACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt > 1:4049265/1‑93 (MQ=255)
aTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTta < 1:2309030/93‑1 (MQ=255)
tGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTtat > 2:4684403/1‑93 (MQ=255)
tGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTtat < 1:5403759/93‑1 (MQ=255)
ttAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTtata < 2:443888/92‑1 (MQ=255)
gTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTtata < 1:5898786/93‑1 (MQ=255)
gTCATAGTTACCCACTGTACTGGTCCAGGGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTc < 2:2278176/93‑1 (MQ=255)
tCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTcc < 1:3215650/93‑1 (MQ=255)
cATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccg < 2:3445429/93‑1 (MQ=255)
aTAGTTACCCCCTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccgg < 2:485682/93‑1 (MQ=255)
aTAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccgg > 1:875402/1‑93 (MQ=255)
tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGACCATTTCCTGATGCTTATACTccggc > 1:1121516/1‑93 (MQ=255)
gTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggccc > 1:4579465/1‑93 (MQ=255)
gTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggccc < 2:411850/93‑1 (MQ=255)
cccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCa > 2:2028308/1‑93 (MQ=255)
cccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCa > 2:2375041/1‑93 (MQ=255)
cccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCa > 1:1685771/1‑93 (MQ=255)
ccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCAt < 2:298432/93‑1 (MQ=255)
ccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGCCCCGGCAt > 1:4214874/1‑93 (MQ=255)
cACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATa > 1:3665355/1‑93 (MQ=255)
cACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATa > 2:2441970/1‑93 (MQ=255)
cTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAAc > 2:3667336/1‑93 (MQ=255)
cTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAAc > 2:818349/1‑93 (MQ=255)
cTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAAc < 2:1246051/93‑1 (MQ=255)
cTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACCGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAAc > 2:1650265/1‑93 (MQ=255)
tGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATCACg > 2:452161/1‑93 (MQ=255)
tGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACg > 2:3426040/1‑93 (MQ=255)
gTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGt < 2:4161492/93‑1 (MQ=255)
gTACTGATCCAGCGCACCACTAACTCCCGGCGGTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGG‑CCGGCCTAACGtt > 1:4716898/1‑93 (MQ=255)
tACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGtt > 1:3990324/1‑93 (MQ=255)
aCTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTc > 2:3991779/1‑93 (MQ=255)
cTGATCCCGCGCACCCCTAACTCCCGGCGTTCGGTACTTATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCa < 2:1947613/93‑1 (MQ=255)
cTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCa < 2:4787221/93‑1 (MQ=255)
gATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCaaa < 2:1358226/93‑1 (MQ=255)
aTCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAt > 1:4417838/1‑93 (MQ=255)
aTCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAt > 1:4883463/1‑93 (MQ=255)
aTCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAt > 1:5697813/1‑93 (MQ=255)
ccAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAc > 1:3386752/1‑93 (MQ=255)
ccAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAc < 2:2908626/93‑1 (MQ=255)
cAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAcc < 2:6057145/93‑1 (MQ=255)
cAGCCCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAcc < 1:5308387/93‑1 (MQ=255)
aGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACcg < 1:2422586/93‑1 (MQ=255)
gcgcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACcgc > 1:1834272/1‑93 (MQ=255)
gcgcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACcgc > 2:2724274/1‑93 (MQ=255)
gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa < 1:5551766/93‑1 (MQ=255)
gcACCACTAACACCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATACCGTTCACCTTCCGCGa < 1:5497788/93‑1 (MQ=255)
caccacTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGAt > 1:2078684/1‑93 (MQ=255)
cacTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAgc > 1:2001536/1‑93 (MQ=255)
cacTAACTCCCCGCGTTCGGTACTTATGTTGGGCTGGCCCATGTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAgc < 2:5333997/93‑1 (MQ=255)
cTAACTCCCGGCGTTCGGTACTTATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAgcgc < 1:5124697/93‑1 (MQ=255)
cTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAgcgc < 1:6141642/93‑1 (MQ=255)
cTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAgcgc > 1:3746206/1‑93 (MQ=255)
cTAACTCCCGGCGTTCGGTACGGATGTTGGGCTGGCCCAGTTCCTGATGCTTATGCTCCGGCCCGGCATAACGTTCAAATACCGCGATAgcgc < 1:2013074/93‑1 (MQ=255)
tAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATGTCCTGATGCTTATACTCAGGCCCGGCATAACGTTCAAATACCGCGATAGcgcg > 1:905051/1‑93 (MQ=255)
aaCTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGa > 2:2924302/1‑93 (MQ=255)
aCTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAg > 2:4143787/1‑93 (MQ=255)
aCTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAg > 1:6044105/1‑93 (MQ=255)
cTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAgg < 1:4651508/93‑1 (MQ=255)
tCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAggg < 2:5767481/93‑1 (MQ=255)
ccccGGCGTTCCGGACTGATGTTGGCCTCTCCCATTCCCGGATACTTATCCTCCGGCCCGGCATAACGTGCAAATACCGCGATAGCGCGAggg < 2:101594/92‑1 (MQ=255)
cccGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGa < 2:5259948/93‑1 (MQ=255)
cccGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGa > 2:5980742/1‑93 (MQ=255)
ccGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAt > 1:5205953/1‑93 (MQ=255)
ccGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAt > 1:1506040/1‑93 (MQ=255)
cGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAtc < 2:2097229/93‑1 (MQ=255)
gTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCa < 2:3911458/93‑1 (MQ=255)
gTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCa > 1:2446768/1‑93 (MQ=255)
ttCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCAt < 2:4971389/93‑1 (MQ=255)
ttCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCAt > 2:1750493/1‑93 (MQ=255)
cGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCg < 1:5947355/93‑1 (MQ=255)
gTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGc > 2:1509928/1‑93 (MQ=255)
gTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGc > 1:1378138/1‑93 (MQ=255)
aCTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAACTACCGCGATAGCGCGAGGGATCTCCATCGGCAc > 2:5937713/1‑93 (MQ=255)
aCTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCAc > 2:3503717/1‑93 (MQ=255)
tGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGc > 2:3275607/1‑93 (MQ=255)
|
CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGC > NC_000913/1447852‑1448031
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAGT > NC_000913/1447849‑1448035
|
TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGAT < SRR4302532.2774098/94‑1 (MQ=60)
TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGAT < SRR4302532.1427146/94‑1 (MQ=60)
TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGAT < SRR4302532.2075092/94‑1 (MQ=60)
TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGAT < SRR4302532.1594231/94‑1 (MQ=60)
CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTT > SRR4302532.4523968/1‑94 (MQ=60)
GTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTG > SRR4302532.3264287/1‑94 (MQ=60)
TTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGC > SRR4302532.1534059/1‑94 (MQ=60)
TCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCT < SRR4302532.4787229/94‑1 (MQ=60)
TCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCT < SRR4302532.3682031/94‑1 (MQ=60)
CATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTG > SRR4302532.3643821/1‑94 (MQ=60)
TGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGC > SRR4302532.2074422/1‑94 (MQ=60)
TGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGC < SRR4302532.4101019/94‑1 (MQ=60)
GGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCC > SRR4302532.3592310/1‑94 (MQ=60)
GGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCC > SRR4302532.6176852/1‑94 (MQ=60)
AAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCA < SRR4302532.5090997/94‑1 (MQ=60)
AGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAT > SRR4302532.4014895/1‑94 (MQ=60)
GATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATT < SRR4302532.1000734/94‑1 (MQ=60)
GATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATT > SRR4302532.5170204/1‑94 (MQ=60)
CCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCC > SRR4302532.4818587/1‑94 (MQ=60)
CAGTCAAAAATGTAGTCATAGTTACCCACTTTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCT > SRR4302532.19371/1‑94 (MQ=60)
CAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCT < SRR4302532.4603857/94‑1 (MQ=60)
CAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCT > SRR4302532.5618707/1‑94 (MQ=60)
AGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTG > SRR4302532.2010092/1‑94 (MQ=60)
GTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGA > SRR4302532.950949/1‑94 (MQ=60)
GTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGA > SRR4302532.907430/1‑94 (MQ=60)
GTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGA < SRR4302532.1324547/94‑1 (MQ=60)
GTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGA > SRR4302532.381777/1‑94 (MQ=60)
TCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAT < SRR4302532.5014655/94‑1 (MQ=60)
TCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAT < SRR4302532.1716339/94‑1 (MQ=60)
TCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAT < SRR4302532.5407861/94‑1 (MQ=60)
TCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAT < SRR4302532.3503543/94‑1 (MQ=60)
TCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAT > SRR4302532.2406106/1‑94 (MQ=60)
TAAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAT < SRR4302532.1319468/94‑1 (MQ=60)
CAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATG > SRR4302532.2677710/1‑94 (MQ=60)
CAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATG < SRR4302532.598163/94‑1 (MQ=60)
AAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCT > SRR4302532.5848385/1‑94 (MQ=60)
AAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCT < SRR4302532.2204498/94‑1 (MQ=60)
AAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTT > SRR4302532.2704712/1‑94 (MQ=60)
AAATGTAGTCATAGTTACCAACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTT > SRR4302532.4185545/1‑94 (MQ=60)
AATGTAGTCGTCGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGACTGGCCCATTTCagtaccgaac < SRR4302532.5664177/94‑11 (MQ=60)
AATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTA < SRR4302532.1564429/94‑1 (MQ=60)
ATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTAT > SRR4302532.981337/1‑94 (MQ=60)
ATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTAT < SRR4302532.5046969/94‑1 (MQ=60)
ATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTAT < SRR4302532.2385845/94‑1 (MQ=60)
TGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATA < SRR4302532.171763/94‑1 (MQ=60)
TGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATA < SRR4302532.5590978/94‑1 (MQ=60)
GTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATAC < SRR4302532.6103060/94‑1 (MQ=60)
TAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACT < SRR4302532.827036/94‑1 (MQ=60)
GTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCC > SRR4302532.5585685/1‑94 (MQ=60)
TCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCG < SRR4302532.3294735/94‑1 (MQ=60)
TCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCG < SRR4302532.3322427/94‑1 (MQ=60)
TCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCG < SRR4302532.5183714/94‑1 (MQ=60)
CATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATCCTCCGG > SRR4302532.5319892/1‑94 (MQ=60)
CATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGG > SRR4302532.905349/1‑94 (MQ=60)
ATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGACCATTTCCTGATGCTTATACTCCGGC > SRR4302532.1158967/1‑94 (MQ=60)
TAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCC < SRR4302532.5790179/94‑1 (MQ=60)
AGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCC > SRR4302532.4735613/1‑94 (MQ=60)
AGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCC < SRR4302532.4152997/94‑1 (MQ=60)
GTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCG < SRR4302532.959364/94‑1 (MQ=60)
TTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATTCTCCGGCCCGG > SRR4302532.2659412/1‑94 (MQ=60)
ACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCA > SRR4302532.1742715/1‑94 (MQ=60)
CCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCAT > SRR4302532.5723952/1‑94 (MQ=60)
CCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGCCCCGGCAT > SRR4302532.4356343/1‑94 (MQ=60)
CCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATA > SRR4302532.3788459/1‑94 (MQ=60)
CCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATA > SRR4302532.3752257/1‑94 (MQ=60)
CACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAA > SRR4302532.127412/1‑94 (MQ=60)
ACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGAACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGCCCCGGCATAAC > SRR4302532.2253718/1‑94 (MQ=60)
TGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGT > SRR4302532.585736/1‑94 (MQ=60)
TGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGT > SRR4302532.1864950/1‑94 (MQ=60)
TGTACTGATCCAGCGCACCACTAACTCCCGGCGGTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGG‑CCGGCCTAACGTT > SRR4302532.4877833/1‑94 (MQ=60)
GTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTT > SRR4302532.4124739/1‑94 (MQ=60)
GATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAT > SRR4302532.5896569/1‑94 (MQ=60)
GATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAT > SRR4302532.5051357/1‑94 (MQ=60)
GATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAT > SRR4302532.4568332/1‑94 (MQ=60)
ATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATA < SRR4302532.3994771/94‑1 (MQ=60)
TCCAGCGCCCCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAC < SRR4302532.2608709/94‑1 (MQ=60)
TCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAC > SRR4302532.3500024/1‑94 (MQ=60)
TCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAC > SRR4302532.2433513/1‑94 (MQ=60)
CAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCG < SRR4302532.2128776/94‑1 (MQ=60)
CAGCCCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCG < SRR4302532.5491931/94‑1 (MQ=60)
AGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGC < SRR4302532.2503106/94‑1 (MQ=60)
AGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGC > SRR4302532.1895258/1‑94 (MQ=60)
GCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGAT < SRR4302532.5744484/94‑1 (MQ=60)
GCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGAT > SRR4302532.2147981/1‑94 (MQ=60)
GCACCACTAACACCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATACCGTTCACCTTCCGCGAT < SRR4302532.5688458/94‑1 (MQ=60)
CACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATA > SRR4302532.481426/1‑94 (MQ=60)
CCCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAG < SRR4302532.1323369/94‑1 (MQ=60)
ACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAG < SRR4302532.5597684/94‑1 (MQ=60)
ACCACAATCTCCCGGCGTTCGGTACGGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGCCATAACGTTCAAATACCGCGATAG < SRR4302532.12895/94‑1 (MQ=60)
CCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGC > SRR4302532.2068251/1‑94 (MQ=60)
CCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGC < SRR4302532.1362514/94‑1 (MQ=60)
CACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCG < SRR4302532.4340589/94‑1 (MQ=60)
ACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGC < SRR4302532.5962587/94‑1 (MQ=60)
ACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGC > SRR4302532.3872123/1‑94 (MQ=60)
CTAACTCCCGGCGTTCGGTACTTATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCG < SRR4302532.5300986/94‑1 (MQ=60)
CTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCG < SRR4302532.6353495/94‑1 (MQ=60)
CTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCG < SRR4302532.2507836/94‑1 (MQ=60)
CTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATGTCCTGATGCTTATACTCAGGCCCGGCATAACGTTCAAATACCGCGATAGCGCG > SRR4302532.935943/1‑94 (MQ=60)
CTAACTCCCGGCGTTCGGTACGGATGTTGGGCTGGCCCAGTTCCTGATGCTTATGCTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCG < SRR4302532.2080213/94‑1 (MQ=60)
TAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGA > SRR4302532.6348194/1‑94 (MQ=60)
AACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAG < SRR4302532.5206436/94‑1 (MQ=60)
AACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAG > SRR4302532.6252805/1‑94 (MQ=60)
ACCCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGG < SRR4302532.1916514/94‑1 (MQ=60)
CTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGG < SRR4302532.4810097/94‑1 (MQ=60)
TCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGA < SRR4302532.4972390/94‑1 (MQ=60)
CCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAT > SRR4302532.1556875/1‑94 (MQ=60)
CCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAT > SRR4302532.3666721/1‑94 (MQ=60)
CCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAT > SRR4302532.5385468/1‑94 (MQ=60)
CCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATC < SRR4302532.4114479/94‑1 (MQ=60)
GCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCC < SRR4302532.4191482/94‑1 (MQ=60)
GCGGTCTGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATGCTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGGGGGATCTCC < SRR4302532.776164/94‑1 (MQ=60)
CGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCA > SRR4302532.2528126/1‑94 (MQ=60)
CGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCA > SRR4302532.1461438/1‑94 (MQ=60)
GTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCAT < SRR4302532.940511/94‑1 (MQ=60)
TTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATC > SRR4302532.3447982/1‑94 (MQ=60)
TCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCG < SRR4302532.6146874/94‑1 (MQ=60)
CGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGG < SRR4302532.6153121/94‑1 (MQ=60)
GGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGC > SRR4302532.2388668/1‑94 (MQ=60)
GGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGC > SRR4302532.1424326/1‑94 (MQ=60)
GTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCA < SRR4302532.2064641/94‑1 (MQ=60)
ATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAG < SRR4302532.884698/94‑1 (MQ=60)
ATGTTGGACTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAG < SRR4302532.16253/94‑1 (MQ=60)
TGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAGT < SRR4302532.2292515/94‑1 (MQ=60)
TGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAGT > SRR4302532.4258201/1‑94 (MQ=60)
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TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAGT > NC_000913/1447849‑1448035
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
