Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,447,942 |
C→T |
V478I (GTC→ATC) |
tynA ← |
copper amine oxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,447,942 | 0 | C | T | 99.6%
| 970.1
/ NA
| 249 | V478I (GTC→ATC) | tynA | copper amine oxidase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (124/124); minor base G (1/0); total (125/124) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 254 total aligned reads displayed.
CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGC > NC_000913/1447852‑1448031
|
cGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGt > 2:353144/1‑93 (MQ=255)
gTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGtt > 1:5149609/1‑93 (MQ=255)
gTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGtt < 2:2844987/93‑1 (MQ=255)
gTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGtt < 2:1441102/93‑1 (MQ=255)
tttCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTgg < 2:473112/93‑1 (MQ=255)
tCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGc < 1:4086954/93‑1 (MQ=255)
tCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGc < 1:1621534/93‑1 (MQ=255)
cATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCt > 1:1824944/1‑93 (MQ=255)
aTGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTg < 1:4062329/93‑1 (MQ=255)
aTGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTg < 1:899452/93‑1 (MQ=255)
tGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTgg > 2:3016563/1‑93 (MQ=255)
ggAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGc > 1:1072953/1‑93 (MQ=255)
ggAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGc < 1:6618614/93‑1 (MQ=255)
ggAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGc > 2:5273217/1‑93 (MQ=255)
aGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCa > 2:6058112/1‑93 (MQ=255)
aGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCa > 1:3186416/1‑93 (MQ=255)
gATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAt < 2:5917335/93‑1 (MQ=255)
aTCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAtt > 1:6252448/1‑93 (MQ=255)
tCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAttt > 2:1762572/1‑93 (MQ=255)
tCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAttt < 2:1203201/93‑1 (MQ=255)
ccAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCCCCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTc < 1:1736561/93‑1 (MQ=255)
cAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTcc < 2:915790/93‑1 (MQ=255)
cAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTcc > 2:2415561/1‑93 (MQ=255)
cAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTcc < 2:2903999/93‑1 (MQ=255)
aGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCt < 1:2935243/93‑1 (MQ=255)
aGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCt > 1:198402/1‑93 (MQ=255)
aGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCt < 1:5822524/93‑1 (MQ=255)
aGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCt < 1:3036519/93‑1 (MQ=255)
gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg > 2:4102864/1‑93 (MQ=255)
gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg > 1:3417454/1‑93 (MQ=255)
gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg > 2:3142443/1‑93 (MQ=255)
cAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAt < 2:1369310/93‑1 (MQ=255)
aaaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCt < 2:3003456/93‑1 (MQ=255)
aaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt > 1:2709973/1‑93 (MQ=255)
aaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt < 1:1359428/93‑1 (MQ=255)
aaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt < 2:2284308/93‑1 (MQ=255)
aTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTta < 1:22433/93‑1 (MQ=255)
tAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATAc < 1:3401964/93‑1 (MQ=255)
tAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATAc < 1:3807784/93‑1 (MQ=255)
aGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACt > 1:2462003/1‑93 (MQ=255)
tCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTcc > 1:5124737/1‑93 (MQ=255)
tCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTcc < 2:4025536/93‑1 (MQ=255)
cATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccg > 2:462653/1‑93 (MQ=255)
aTAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccgg < 2:441565/93‑1 (MQ=255)
tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggc > 2:361249/1‑93 (MQ=255)
tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggc < 1:6069094/93‑1 (MQ=255)
tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggc < 1:4235760/93‑1 (MQ=255)
tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggc > 2:1981063/1‑93 (MQ=255)
aGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcc < 2:6387074/93‑1 (MQ=255)
gTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggccc > 1:2888506/1‑93 (MQ=255)
ttACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcccg < 1:3054085/93‑1 (MQ=255)
tACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcccgg > 1:3464103/1‑93 (MQ=255)
aCCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcccggc > 2:4208868/1‑93 (MQ=255)
aCCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcccggc > 1:4718435/1‑93 (MQ=255)
cccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTACCTGATGCTTATACTCCGGCCCGGCa > 1:5361161/1‑93 (MQ=255)
ccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCAt > 1:3858891/1‑93 (MQ=255)
cACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATa > 2:129862/1‑93 (MQ=255)
cACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATa > 2:4905162/1‑93 (MQ=255)
aCTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATaa > 2:5376942/1‑93 (MQ=255)
tGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACg > 1:5443652/1‑93 (MQ=255)
tACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGAGGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGtt > 2:4664171/1‑93 (MQ=255)
aCTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTc > 2:5490208/1‑93 (MQ=255)
tGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCaa > 1:2547471/1‑93 (MQ=255)
tGATCCAGCGCACCACTAACTCCCGGAGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCaa > 1:5299589/1‑93 (MQ=255)
gATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCaaa > 2:6469209/1‑93 (MQ=255)
aTCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAt > 1:279163/1‑93 (MQ=255)
aTCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAt < 2:3451438/93‑1 (MQ=255)
tCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATa < 1:4025589/93‑1 (MQ=255)
tCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATa > 2:5995325/1‑93 (MQ=255)
ccAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAc < 1:6001715/93‑1 (MQ=255)
ccAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAc < 2:3430527/93‑1 (MQ=255)
ccAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAc < 1:6283856/93‑1 (MQ=255)
cAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAcc < 2:1000300/93‑1 (MQ=255)
cAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAcc < 1:2268937/93‑1 (MQ=255)
gcgcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACcgc < 2:3879900/93‑1 (MQ=255)
gcgcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACcgc > 2:4234465/1‑93 (MQ=255)
gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa > 2:2186560/1‑93 (MQ=255)
gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa < 2:153768/93‑1 (MQ=255)
gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa < 1:5622254/93‑1 (MQ=255)
gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa > 1:1240088/1‑93 (MQ=255)
caccacTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGAt > 2:5692300/1‑93 (MQ=255)
caccacTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGAt > 2:2104225/1‑93 (MQ=255)
tAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGcgcg > 2:1348010/1‑93 (MQ=255)
aaCTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGa > 1:924638/1‑93 (MQ=255)
aCTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAg < 2:1941852/93‑1 (MQ=255)
cTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAgg > 2:384593/1‑93 (MQ=255)
cTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAgg > 2:1703541/1‑93 (MQ=255)
tCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAggg < 1:4609906/93‑1 (MQ=255)
ccgggCGTCCGGTACTGAGGTTGGGCTGGCCCATTTCCTGATGC‑TATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAt < 1:3133977/90‑1 (MQ=255)
cccGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGa > 2:2611168/1‑93 (MQ=255)
ccGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATGCCGCGATAGCGCGAGGGAt < 1:6475615/93‑1 (MQ=255)
gCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAtctc < 2:749626/93‑1 (MQ=255)
gTTCGGTACTGATGTTGGGCTGGCTCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCa > 2:5087262/1‑93 (MQ=255)
ttCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCAt > 1:1492553/1‑93 (MQ=255)
tCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATc < 1:258771/93‑1 (MQ=255)
tCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATc < 2:3171304/93‑1 (MQ=255)
gTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGc > 2:4753484/1‑93 (MQ=255)
gTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGc < 1:2103746/93‑1 (MQ=255)
tACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCa < 1:1012665/93‑1 (MQ=255)
tGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGc > 2:6586987/1‑93 (MQ=255)
|
CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGC > NC_000913/1447852‑1448031
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAGT > NC_000913/1447849‑1448035
|
TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGAT < SRR4302547.3595778/94‑1 (MQ=60)
GCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATG < SRR4302547.3738864/94‑1 (MQ=60)
CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTT > SRR4302547.5255661/1‑94 (MQ=60)
CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTT > SRR4302547.763760/1‑94 (MQ=60)
GTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTG > SRR4302547.993967/1‑94 (MQ=60)
GTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTG > SRR4302547.4108610/1‑94 (MQ=60)
GTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTG > SRR4302547.1174468/1‑94 (MQ=60)
TCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCT < SRR4302547.4170038/94‑1 (MQ=60)
TCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCT > SRR4302547.1861024/1‑94 (MQ=60)
TCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCT < SRR4302547.1653621/94‑1 (MQ=60)
ATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGG < SRR4302547.4144843/94‑1 (MQ=60)
ATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGG > SRR4302547.5613989/1‑94 (MQ=60)
ATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGG < SRR4302547.1696858/94‑1 (MQ=60)
ATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGG < SRR4302547.916755/94‑1 (MQ=60)
TGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGC > SRR4302547.1094338/1‑94 (MQ=60)
GGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCC < SRR4302547.6756368/94‑1 (MQ=60)
AAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCA < SRR4302547.6181519/94‑1 (MQ=60)
AAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCA > SRR4302547.150099/1‑94 (MQ=60)
AAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCA > SRR4302547.3249906/1‑94 (MQ=60)
AGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAT < SRR4302547.6343723/94‑1 (MQ=60)
AGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAT > SRR4302547.3206008/1‑94 (MQ=60)
GATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATT > SRR4302547.6382336/1‑94 (MQ=60)
GATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAAT < SRR4302547.1349584/94‑1 (MQ=60)
TCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTC < SRR4302547.2473122/94‑1 (MQ=60)
TCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGCACTGATGTTGGGCTGGCCCATTTC > SRR4302547.3833280/1‑94 (MQ=60)
CCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCCCCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCC < SRR4302547.1770689/94‑1 (MQ=60)
CCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCC > SRR4302547.5311483/1‑94 (MQ=60)
CAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCT < SRR4302547.2643861/94‑1 (MQ=60)
CAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCT > SRR4302547.202105/1‑94 (MQ=60)
AGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTG > SRR4302547.3487040/1‑94 (MQ=60)
AGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTG < SRR4302547.2993733/94‑1 (MQ=60)
AGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTG < SRR4302547.3096928/94‑1 (MQ=60)
AGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTG < SRR4302547.5942989/94‑1 (MQ=60)
AAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCT < SRR4302547.6402406/94‑1 (MQ=60)
AAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTT > SRR4302547.2764377/1‑94 (MQ=60)
AAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTT < SRR4302547.3493379/94‑1 (MQ=60)
AATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTA > SRR4302547.3927179/1‑94 (MQ=60)
AATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTA < SRR4302547.1386708/94‑1 (MQ=60)
AATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTA < SRR4302547.3483917/94‑1 (MQ=60)
ATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTAT < SRR4302547.22865/94‑1 (MQ=60)
TAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACT > SRR4302547.2511764/1‑94 (MQ=60)
TAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACT > SRR4302547.4090265/1‑94 (MQ=60)
TAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACT < SRR4302547.3885397/94‑1 (MQ=60)
TAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACT < SRR4302547.3471189/94‑1 (MQ=60)
AGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTC < SRR4302547.1180306/94‑1 (MQ=60)
GTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCC > SRR4302547.5230333/1‑94 (MQ=60)
TCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCG < SRR4302547.4148902/94‑1 (MQ=60)
TCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCG > SRR4302547.2221078/1‑94 (MQ=60)
TCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCG < SRR4302547.2231144/94‑1 (MQ=60)
CATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGG < SRR4302547.1063931/94‑1 (MQ=60)
ATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGC > SRR4302547.2937452/1‑94 (MQ=60)
ATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGC > SRR4302547.5243368/1‑94 (MQ=60)
TAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCC < SRR4302547.4322358/94‑1 (MQ=60)
TAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCC < SRR4302547.6194974/94‑1 (MQ=60)
TAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCC < SRR4302547.5756327/94‑1 (MQ=60)
AGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCC > SRR4302547.6569253/1‑94 (MQ=60)
AGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCC > SRR4302547.2946125/1‑94 (MQ=60)
TTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGG < SRR4302547.3114869/94‑1 (MQ=60)
TTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGG > SRR4302547.3534733/1‑94 (MQ=60)
TACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGC > SRR4302547.4816139/1‑94 (MQ=60)
ACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCA > SRR4302547.333850/1‑94 (MQ=60)
ACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCA < SRR4302547.2503182/94‑1 (MQ=60)
ACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTACCTGATGCTTATACTCCGGCCCGGCA > SRR4302547.5471745/1‑94 (MQ=60)
CCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCAT > SRR4302547.6464213/1‑94 (MQ=60)
CCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCAT > SRR4302547.3573717/1‑94 (MQ=60)
CCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCAT > SRR4302547.2729246/1‑94 (MQ=60)
CCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCAT > SRR4302547.3937421/1‑94 (MQ=60)
CACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAA > SRR4302547.5555739/1‑94 (MQ=60)
CACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAA > SRR4302547.4781279/1‑94 (MQ=60)
ACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAAC < SRR4302547.404562/94‑1 (MQ=60)
CTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACG > SRR4302547.5556134/1‑94 (MQ=60)
CTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACG > SRR4302547.5049085/1‑94 (MQ=60)
GTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTT > SRR4302547.2948628/1‑94 (MQ=60)
GTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTT > SRR4302547.3167090/1‑94 (MQ=60)
TACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTC > SRR4302547.6696890/1‑94 (MQ=60)
ACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCA < SRR4302547.1659114/94‑1 (MQ=60)
ACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCA < SRR4302547.4164023/94‑1 (MQ=60)
ACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCA > SRR4302547.5478681/1‑94 (MQ=60)
CTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAA > SRR4302547.2598914/1‑94 (MQ=60)
CTGATCCAGCGCACCACTAACTCCCGGAGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAA > SRR4302547.5408936/1‑94 (MQ=60)
TGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAA > SRR4302547.2042687/1‑94 (MQ=60)
GATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAT > SRR4302547.968965/1‑94 (MQ=60)
GATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAT > SRR4302547.284369/1‑94 (MQ=60)
ATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATA > SRR4302547.3034125/1‑94 (MQ=60)
TCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAC > SRR4302547.2632338/1‑94 (MQ=60)
TCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAC > SRR4302547.4404034/1‑94 (MQ=60)
TCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAC < SRR4302547.4107380/94‑1 (MQ=60)
CCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACC < SRR4302547.6126264/94‑1 (MQ=60)
CCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACC < SRR4302547.6414412/94‑1 (MQ=60)
CAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCG < SRR4302547.2314820/94‑1 (MQ=60)
AGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGC < SRR4302547.5136780/94‑1 (MQ=60)
AGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGC < SRR4302547.4391795/94‑1 (MQ=60)
AGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGACCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCAC > SRR4302547.281727/1‑94 (MQ=60)
GCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCG < SRR4302547.3297792/94‑1 (MQ=60)
CGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGA > SRR4302547.1265127/1‑94 (MQ=60)
CGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGA < SRR4302547.5457967/94‑1 (MQ=60)
GCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGAT < SRR4302547.5738280/94‑1 (MQ=60)
CACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCGTTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATA > SRR4302547.815037/1‑94 (MQ=60)
CACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATA > SRR4302547.1990105/1‑94 (MQ=60)
ACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAG < SRR4302547.5948768/94‑1 (MQ=60)
CCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGC < SRR4302547.2570386/94‑1 (MQ=60)
CACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCG > SRR4302547.5713145/1‑94 (MQ=60)
ACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGC > SRR4302547.3113824/1‑94 (MQ=60)
CTACCTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATTCTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCG < SRR4302547.307025/94‑1 (MQ=60)
CTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCG < SRR4302547.6243281/94‑1 (MQ=60)
TAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGA > SRR4302547.4284755/1‑94 (MQ=60)
TAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGA > SRR4302547.942500/1‑94 (MQ=60)
ACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATAGTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGGGG > SRR4302547.1828019/1‑94 (MQ=60)
CTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGG > SRR4302547.6040117/1‑94 (MQ=60)
TCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGA < SRR4302547.4705324/94‑1 (MQ=60)
TCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGA < SRR4302547.2292764/94‑1 (MQ=60)
CCGGGCGTCCGGTACTGAGGTTGGGCTGGCCCATTTCCTGATGC‑TATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATC < SRR4302547.3196200/94‑1 (MQ=60)
CCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATGCCGCGATAGCGCGAGGGATC < SRR4302547.6610446/94‑1 (MQ=60)
CGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCA > SRR4302547.922772/1‑94 (MQ=60)
GTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCAT > SRR4302547.1522332/1‑94 (MQ=60)
TTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATC < SRR4302547.1981804/94‑1 (MQ=60)
TCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCG < SRR4302547.263613/94‑1 (MQ=60)
TCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCG < SRR4302547.152679/94‑1 (MQ=60)
TCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCG < SRR4302547.28611/94‑1 (MQ=60)
TCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCG > SRR4302547.3531704/1‑94 (MQ=60)
CGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGG > SRR4302547.3140862/1‑94 (MQ=60)
CGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGG > SRR4302547.5363681/1‑94 (MQ=60)
CGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGG > SRR4302547.1397882/1‑94 (MQ=60)
GTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCA < SRR4302547.2145671/94‑1 (MQ=60)
GTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCA > SRR4302547.2550124/1‑94 (MQ=60)
TACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCAC < SRR4302547.1032460/94‑1 (MQ=60)
ATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAG > SRR4302547.3322603/1‑94 (MQ=60)
ATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAG > SRR4302547.5003949/1‑94 (MQ=60)
ATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAG > SRR4302547.4542634/1‑94 (MQ=60)
TGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAGT < SRR4302547.164188/94‑1 (MQ=60)
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TGCCGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGCCAGT > NC_000913/1447849‑1448035
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
