Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
3,156,257 |
(CCA)2→1 |
coding (594‑596/930 nt) |
yqhG → |
hypothetical protein |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
3156257 |
3156259 |
3 |
240 [0] |
[0] 244 |
yqhG |
hypothetical protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 3156256 | 0 (0.000) | 228 (1.010) |
122/178 |
0.1 |
100% |
coding (593/930 nt) |
yqhG |
hypothetical protein |
| ? | NC_000913 |
3156260 = |
0 (0.000) | coding (597/930 nt) |
yqhG |
hypothetical protein |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > NC_000913/3156164‑3156350
|
AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAG < SRR4302532.1967981/94‑1 (MQ=60)
AGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGT > SRR4302532.2185354/1‑94 (MQ=60)
GCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGTCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTT < SRR4302532.838558/94‑1 (MQ=60)
GGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAAT > SRR4302532.5990232/1‑94 (MQ=60)
GGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAAT > SRR4302532.3978730/1‑94 (MQ=60)
AAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGC > SRR4302532.6060490/1‑94 (MQ=60)
AGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCC > SRR4302532.473249/1‑94 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT < SRR4302532.4314764/94‑1 (MQ=60)
CTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTC > SRR4302532.3649563/1‑94 (MQ=60)
CTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTC < SRR4302532.3300642/94‑1 (MQ=60)
TTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCT < SRR4302532.6328637/94‑1 (MQ=60)
TTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTA > SRR4302532.4427855/1‑94 (MQ=60)
TGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTAT > SRR4302532.6190197/1‑94 (MQ=60)
TGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTAT < SRR4302532.5597186/94‑1 (MQ=60)
TGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTAT < SRR4302532.3903553/94‑1 (MQ=60)
TGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTAT < SRR4302532.2688570/94‑1 (MQ=60)
TGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTAT < SRR4302532.215427/94‑1 (MQ=60)
CCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCGGGCGGTTAATGCCTTCTATAAAAC < SRR4302532.963371/94‑1 (MQ=60)
CCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAAC < SRR4302532.3821155/94‑1 (MQ=60)
CCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAAC > SRR4302532.6249283/1‑94 (MQ=60)
CCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAAC > SRR4302532.1266608/1‑94 (MQ=60)
CGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCTGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACC < SRR4302532.4460887/94‑1 (MQ=60)
CGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACC > SRR4302532.5521057/1‑94 (MQ=60)
GAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCA > SRR4302532.5502985/1‑94 (MQ=60)
GAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCA > SRR4302532.2784973/1‑94 (MQ=60)
GAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCA > SRR4302532.1889169/1‑94 (MQ=60)
AACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCAC > SRR4302532.2986163/1‑94 (MQ=60)
CTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCT > SRR4302532.6192546/1‑94 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTT < SRR4302532.3672661/94‑1 (MQ=60)
CTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTC > SRR4302532.2397923/1‑94 (MQ=60)
CTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTC > SRR4302532.4243070/1‑94 (MQ=60)
TTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCA < SRR4302532.720894/94‑1 (MQ=60)
TTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAA > SRR4302532.4096040/1‑94 (MQ=60)
TGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAG > SRR4302532.206953/1‑94 (MQ=60)
GAATATATTGCTGATTATTGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTTTATAAAACCACCTTCAAGA > SRR4302532.5674103/1‑94 (MQ=60)
AACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAC < SRR4302532.5697333/94‑1 (MQ=60)
AACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAC < SRR4302532.1977384/94‑1 (MQ=60)
AACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAC < SRR4302532.5764303/94‑1 (MQ=60)
AACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAC < SRR4302532.3577996/94‑1 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG > SRR4302532.827524/1‑94 (MQ=60)
ATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGC > SRR4302532.6086304/1‑94 (MQ=60)
ATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGC > SRR4302532.703382/1‑94 (MQ=60)
ATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCA < SRR4302532.400698/94‑1 (MQ=60)
ATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCA > SRR4302532.481374/1‑94 (MQ=60)
TTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAA > SRR4302532.6263375/1‑94 (MQ=60)
TGCTGATTATAGTTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAAT > SRR4302532.5845082/1‑94 (MQ=60)
TGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAAT > SRR4302532.2720216/1‑94 (MQ=60)
TGCTGATTATAGCTGCCCGTGGACGTGGGTGGTTTCCTACTCTTCCCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCTCCTTCAAGACGGCCAAT < SRR4302532.2171100/94‑1 (MQ=60)
GCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATA > SRR4302532.4244343/1‑94 (MQ=60)
GTGATTATAGCTGGGCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAA < SRR4302532.5356425/94‑1 (MQ=60)
gtATTATAGCTGGCGGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGATTAATGCCTTCTATAAAACCACCTTCAAGACTGCCAATAAT < SRR4302532.2628917/92‑1 (MQ=60)
TGATAATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCCCCTTCAAGACGGCCGATAAT < SRR4302532.3265878/94‑1 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC > SRR4302532.1344501/1‑94 (MQ=60)
TTATAGCTGGCCGTGGCCGTGAGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAACCCACCTTCAAGACGGCCAATAATCCC < SRR4302532.1837759/94‑1 (MQ=60)
TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCG > SRR4302532.4559058/1‑94 (MQ=60)
ATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGA < SRR4302532.4316593/94‑1 (MQ=60)
tgcCTGGCCGTGGCCGTGGGTGGTTTCCGACTCTGACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCTCCTTCAAGACGGCCAATAATCCCGAT < SRR4302532.5460350/91‑1 (MQ=60)
TAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAT > SRR4302532.4356611/1‑94 (MQ=60)
TAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAT > SRR4302532.3369344/1‑94 (MQ=60)
AGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATG < SRR4302532.4595885/94‑1 (MQ=60)
AGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATG < SRR4302532.5491971/94‑1 (MQ=60)
AGCGGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATG < SRR4302532.3524042/94‑1 (MQ=60)
CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGCA > SRR4302532.3752758/1‑94 (MQ=60)
CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAA > SRR4302532.3838739/1‑94 (MQ=60)
CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAA < SRR4302532.4525399/94‑1 (MQ=60)
GGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGA > SRR4302532.1714965/1‑94 (MQ=60)
GCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGAT > SRR4302532.3440652/1‑94 (MQ=60)
GCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATA < SRR4302532.6279034/94‑1 (MQ=60)
CGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT < SRR4302532.4994860/94‑1 (MQ=60)
CGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT < SRR4302532.2025855/94‑1 (MQ=60)
CGGGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT < SRR4302532.1862344/94‑1 (MQ=60)
GTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG > SRR4302532.3546969/1‑94 (MQ=60)
GTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG < SRR4302532.3878905/94‑1 (MQ=60)
TGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGC < SRR4302532.1063132/94‑1 (MQ=60)
GGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCA < SRR4302532.4534443/94‑1 (MQ=60)
GGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCA > SRR4302532.3606139/1‑94 (MQ=60)
CGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT < SRR4302532.4742277/94‑1 (MQ=60)
CGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT < SRR4302532.5402392/94‑1 (MQ=60)
CGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCCATAAAACCCCCTTCAAGACCGCTACTAATCCCGATGAAGATATGCAAAT < SRR4302532.2136403/94‑1 (MQ=60)
CGTGGGTGGTTTCCGACTCTTA‑‑‑CCACCAGGCGGTTAATGCCTTCTATAAACCCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT < SRR4302532.5654003/94‑1 (MQ=60)
GTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATA < SRR4302532.1857238/94‑1 (MQ=60)
GTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATA > SRR4302532.1956005/1‑94 (MQ=60)
GTGGGAGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACTACCTTGAAGACGGCCAATAATCCCGATGAAGATATGCAAATA > SRR4302532.2360847/1‑94 (MQ=60)
TGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAG < SRR4302532.2947883/94‑1 (MQ=60)
TGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAG > SRR4302532.5148709/1‑94 (MQ=60)
GGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAA < SRR4302532.1279251/94‑1 (MQ=60)
GTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAC < SRR4302532.804915/94‑1 (MQ=60)
GTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAC < SRR4302532.2726994/94‑1 (MQ=60)
GTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAC < SRR4302532.4688332/94‑1 (MQ=60)
TGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACG < SRR4302532.4507151/94‑1 (MQ=60)
TGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACG > SRR4302532.1104670/1‑94 (MQ=60)
GGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGG < SRR4302532.1553377/94‑1 (MQ=60)
GTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC < SRR4302532.419071/94‑1 (MQ=60)
GTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC > SRR4302532.4695974/1‑94 (MQ=60)
TTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCA < SRR4302532.5327941/94‑1 (MQ=60)
TTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCA < SRR4302532.2267939/94‑1 (MQ=60)
TTGCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCA < SRR4302532.29300/94‑1 (MQ=60)
TCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAAT > SRR4302532.2487822/1‑94 (MQ=60)
CCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATT > SRR4302532.1757215/1‑94 (MQ=60)
CCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATT > SRR4302532.2837024/1‑94 (MQ=60)
CGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTT < SRR4302532.3249597/94‑1 (MQ=60)
CGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTT < SRR4302532.110686/94‑1 (MQ=60)
GACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTA < SRR4302532.3511209/94‑1 (MQ=60)
GACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTA > SRR4302532.1832486/1‑94 (MQ=60)
GACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTA < SRR4302532.860541/94‑1 (MQ=60)
ACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTAT > SRR4302532.1497191/1‑94 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT > SRR4302532.5232551/1‑94 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT < SRR4302532.4695978/94‑1 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT > SRR4302532.2109484/1‑94 (MQ=60)
TCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTT < SRR4302532.1256124/94‑1 (MQ=60)
CTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTA < SRR4302532.5885923/94‑1 (MQ=60)
CTTACCG‑‑‑CCAGGCGGTTAATGACTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTA > SRR4302532.129987/1‑94 (MQ=60)
atcttaccgCCAGGCGGTTAATGCCTTCTATAAACCCTCATTCAAGACGGACAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT < SRR4302532.4695977/85‑1 (MQ=60)
TTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTAC < SRR4302532.616737/94‑1 (MQ=60)
TTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTAC < SRR4302532.5993074/94‑1 (MQ=60)
TACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACG < SRR4302532.561012/94‑1 (MQ=60)
cttaccgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTA > SRR4302532.1951874/8‑94 (MQ=60)
CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > SRR4302532.653248/1‑94 (MQ=60)
CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT < SRR4302532.2485563/94‑1 (MQ=60)
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AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > NC_000913/3156164‑3156350
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
