Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,430,453 |
+C |
coding (745/747 nt) |
smf ← |
putative Rossmann‑fold nucleotide‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,430,453 | 1 | . | C | 98.0%
| 716.8
/ 4.3
| 203 | coding (745/747 nt) | smf | putative Rossmann‑fold nucleotide‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (3/1); new base C (111/88); total (114/89) |
| Fisher's exact test for biased strand distribution p-value = 6.33e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 224 total aligned reads displayed.
GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT > NC_000913/3430361‑3430539
|
aaTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑g‑gc < 1:4843423/93‑2 (MQ=255)
aaTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑g‑gc < 2:3693371/93‑2 (MQ=255)
tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTggcaa‑g‑g‑caa < 2:3860201/93‑1 (MQ=255)
ttcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑caaa < 2:1890548/93‑1 (MQ=255)
tcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑caaaa > 1:2902154/1‑93 (MQ=255)
cttcCGATTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑caaaaa > 1:6050740/1‑92 (MQ=255)
ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑caaaaac > 2:2041101/1‑91 (MQ=255)
tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACt < 1:42743/93‑1 (MQ=255)
tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACt < 2:1201054/93‑1 (MQ=255)
ccGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACtt < 2:1498088/93‑1 (MQ=255)
ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTtct > 2:2524467/1‑93 (MQ=255)
gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTtctc < 2:1763698/93‑1 (MQ=255)
gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTtctc > 2:1398358/1‑93 (MQ=255)
ttCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCg < 1:4692695/93‑1 (MQ=255)
cGTCACAAGATTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAATG‑T‑AAAAACTTCTCGccc > 2:5492477/1‑93 (MQ=255)
cGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGccc > 2:4096816/1‑93 (MQ=255)
gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGcccc > 2:2642465/1‑93 (MQ=255)
gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGcccc > 2:4773732/1‑93 (MQ=255)
tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCt > 1:1171192/1‑93 (MQ=255)
tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCt < 1:2488146/93‑1 (MQ=255)
acaAGAATCGCACCTTGTTTTATTAACCAGTGCGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑GAC‑AAAAACTTCTCGCCCCTGc > 2:5164254/1‑93 (MQ=255)
acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAACAACTTCTCGCCCCTGc > 2:3065064/1‑93 (MQ=255)
acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGc < 2:1908444/93‑1 (MQ=255)
acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGc < 2:5500517/93‑1 (MQ=255)
caAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCt > 2:1282211/1‑93 (MQ=255)
aaGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTc < 1:2192988/93‑1 (MQ=255)
aaGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTc > 2:5329604/1‑93 (MQ=255)
gAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCaa < 1:4515562/93‑1 (MQ=255)
aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAgc > 1:3640021/1‑93 (MQ=255)
aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAgc > 1:2982457/1‑93 (MQ=255)
tCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAgcg < 1:5746027/93‑1 (MQ=255)
gCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGca > 1:5911651/1‑93 (MQ=255)
cACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGcac < 1:2404792/93‑1 (MQ=255)
cACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTAGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGcac > 1:3725912/1‑93 (MQ=255)
cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTGTTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc > 1:3451248/1‑93 (MQ=255)
cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc < 2:5389824/93‑1 (MQ=255)
cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc < 2:5195422/93‑1 (MQ=255)
ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg > 2:2964191/1‑93 (MQ=255)
ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg > 2:5608786/1‑93 (MQ=255)
cttttttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg < 1:698915/90‑1 (MQ=255)
tttATTAACCAGTGAGGACCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCt > 1:1008038/1‑93 (MQ=255)
ttattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTg > 2:3759715/1‑93 (MQ=255)
ttattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTg > 2:4508447/1‑93 (MQ=255)
attaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTc > 2:736420/1‑93 (MQ=255)
ttaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa < 1:3523696/93‑1 (MQ=255)
taACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAc < 2:3901897/93‑1 (MQ=255)
aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc > 1:4969827/1‑93 (MQ=255)
aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc > 1:3823585/1‑93 (MQ=255)
aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa < 2:1423680/93‑1 (MQ=255)
aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa > 2:5776469/1‑93 (MQ=255)
aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa < 1:871164/93‑1 (MQ=255)
ccAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAg < 1:2694540/93‑1 (MQ=255)
cAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGc < 1:1416215/93‑1 (MQ=255)
tGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGaa > 2:3420727/1‑93 (MQ=255)
ggCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCa > 2:2981893/1‑93 (MQ=255)
gCCCATCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCAc < 1:2134704/93‑1 (MQ=255)
ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTTTCACCAGCGAACCACTa < 2:2339459/93‑1 (MQ=255)
ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTa < 2:1170139/93‑1 (MQ=255)
ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTa < 2:5041813/93‑1 (MQ=255)
cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAC‑G‑GCAAAAACTTCTCGCACCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTag > 2:4288816/1‑92 (MQ=255)
cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTAc < 1:3131996/93‑1 (MQ=255)
cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc > 2:5895195/1‑93 (MQ=255)
cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc > 1:2987014/1‑93 (MQ=255)
cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc < 1:5291661/93‑1 (MQ=255)
cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc > 2:4551783/1‑93 (MQ=255)
cTTCGCTTCCCGGATTCCATATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCACACAACGTGCTGGCACCATCGAACctctta > 1:6011546/1‑91 (MQ=255)
cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa < 1:2531543/93‑1 (MQ=255)
cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa < 2:7789/93‑1 (MQ=255)
cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa > 1:396477/1‑93 (MQ=255)
cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa < 1:4046705/93‑1 (MQ=255)
cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa > 1:84994/1‑93 (MQ=255)
ttCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg > 1:4108045/1‑93 (MQ=255)
ttCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg > 1:5730085/1‑93 (MQ=255)
cccGGATTCCCTATTGGACCTGGCAA‑GTC‑AAAATCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc < 1:6106033/93‑1 (MQ=255)
cccGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc < 2:1067538/93‑1 (MQ=255)
cccGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc > 2:4380703/1‑93 (MQ=255)
ccGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCg < 2:3260117/93‑1 (MQ=255)
cGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc > 2:4051434/1‑93 (MQ=255)
cGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc > 2:3144637/1‑93 (MQ=255)
cGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc > 1:557153/1‑93 (MQ=255)
cGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc > 1:815149/1‑93 (MQ=255)
gagtCCCTATTGGACCGGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCtt > 1:5485349/4‑93 (MQ=255)
gATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCtc > 2:4978395/1‑92 (MQ=255)
ccTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacc > 1:1801206/1‑93 (MQ=255)
cTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacca > 1:2678245/1‑93 (MQ=255)
ttGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca < 2:3647747/93‑1 (MQ=255)
ttGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca > 2:2932949/1‑93 (MQ=255)
ttGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca > 2:4862949/1‑93 (MQ=255)
tGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAg < 2:1612906/93‑1 (MQ=255)
ggACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt < 2:3587227/93‑1 (MQ=255)
aCCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTac < 2:3361398/93‑1 (MQ=255)
ccTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca > 2:5516146/1‑93 (MQ=255)
ccTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca > 1:4922648/1‑93 (MQ=255)
ccTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca < 1:4255753/93‑1 (MQ=255)
tGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAcc > 2:4199723/1‑93 (MQ=255)
tGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAcc > 2:1457630/1‑93 (MQ=255)
tGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAcc > 2:2285532/1‑93 (MQ=255)
tGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACAACTACGCAAAGCCGCTTCCACCACCAGTACAcc > 1:1667158/1‑93 (MQ=255)
ggcaa‑g‑gcaaAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCt < 1:5707844/93‑1 (MQ=255)
gCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCtt < 1:2048869/93‑1 (MQ=255)
|
GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT > NC_000913/3430361‑3430539
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑AAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACT > NC_000913/3430361‑3430543
|
GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑C > SRR4302532.5998027/1‑94 (MQ=60)
AATTTCTTCGCGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑CA < SRR4302532.5010150/94‑1 (MQ=60)
AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑CA < SRR4302532.5010149/94‑1 (MQ=60)
AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑CA > SRR4302532.850821/1‑94 (MQ=60)
TTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑CAAAA > SRR4302532.1090162/1‑94 (MQ=60)
TTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑CAAAA > SRR4302532.2998986/1‑94 (MQ=60)
TCTTCCGATTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA > SRR4302532.6259679/1‑94 (MQ=60)
TCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTT < SRR4302532.44272/94‑1 (MQ=60)
TCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTT < SRR4302532.4134590/94‑1 (MQ=60)
CGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCT < SRR4302532.3083037/94‑1 (MQ=60)
GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTC < SRR4302532.578585/94‑1 (MQ=60)
GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTC > SRR4302532.3186621/1‑94 (MQ=60)
TTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGC < SRR4302532.4852744/94‑1 (MQ=60)
TCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCC > SRR4302532.3856549/1‑94 (MQ=60)
CCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCC > SRR4302532.6112260/1‑94 (MQ=60)
GTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCT > SRR4302532.2158526/1‑94 (MQ=60)
GTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCT > SRR4302532.1210333/1‑94 (MQ=60)
GTCACAAGAATCCCACCTTTTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCT < SRR4302532.1508534/94‑1 (MQ=60)
GTAACAAGAATCGCACCTTTTTATATGACCGAGTGAGGCCCTTCGCTTCCCGGATCCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCT < SRR4302532.1444457/94‑1 (MQ=60)
TCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTG < SRR4302532.2571061/94‑1 (MQ=60)
AAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCA < SRR4302532.5064580/94‑1 (MQ=60)
AAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCA < SRR4302532.2266056/94‑1 (MQ=60)
AGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAA > SRR4302532.4290399/1‑94 (MQ=60)
GAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAG < SRR4302532.4669725/94‑1 (MQ=60)
GAAGCTCACCTTGTTTTAGTAACCAGTTAGGCCCTTCGCTTCCCGGATTCTCTATTGGACCTGGCAT‑G‑GCAAAAA‑CTTCTCGCCCCTGCACAAG > SRR4302532.5679914/1‑94 (MQ=60)
AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGC > SRR4302532.3081091/1‑94 (MQ=60)
AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGC > SRR4302532.3762160/1‑94 (MQ=60)
AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGC > SRR4302532.4252112/1‑94 (MQ=60)
tcCGCACCTTGTTGTATTAACCACTGAGGCCTTTCGCTTCCCGGATTCCCTATTGGCCCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCG < SRR4302532.2659021/92‑1 (MQ=60)
TCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGC < SRR4302532.5946045/94‑1 (MQ=60)
CGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCA > SRR4302532.6116385/1‑94 (MQ=60)
GCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCAC > SRR4302532.2502245/1‑94 (MQ=60)
GCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTAGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCAC > SRR4302532.3851042/1‑94 (MQ=60)
CACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACA > SRR4302532.2909815/1‑94 (MQ=60)
CACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACA < SRR4302532.2484828/94‑1 (MQ=60)
CACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACA < SRR4302532.3608191/94‑1 (MQ=60)
ACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAA > SRR4302532.4195606/1‑94 (MQ=60)
ACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAA > SRR4302532.2113584/1‑94 (MQ=60)
ACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCAGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAA < SRR4302532.6231653/94‑1 (MQ=60)
CCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTGTTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAAC > SRR4302532.3566840/1‑94 (MQ=60)
CCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAAC < SRR4302532.3352974/94‑1 (MQ=60)
CCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAAC > SRR4302532.5577128/1‑94 (MQ=60)
CTT‑TTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGT < SRR4302532.722835/94‑1 (MQ=60)
TGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTG > SRR4302532.6303580/1‑94 (MQ=60)
TGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGGG < SRR4302532.2217335/94‑1 (MQ=60)
GTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGC > SRR4302532.3564342/1‑94 (MQ=60)
TTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCT < SRR4302532.227404/94‑1 (MQ=60)
TTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCT < SRR4302532.2585523/94‑1 (MQ=60)
TTTTATTAACCAGTGAGGACCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCT > SRR4302532.1042325/1‑94 (MQ=60)
TTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAC < SRR4302532.3641632/94‑1 (MQ=60)
TAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACC > SRR4302532.5140212/1‑94 (MQ=60)
TAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACC > SRR4302532.3952672/1‑94 (MQ=60)
ACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAG < SRR4302532.1753056/94‑1 (MQ=60)
ACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAG < SRR4302532.3053859/94‑1 (MQ=60)
ACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAG < SRR4302532.900993/94‑1 (MQ=60)
CCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGC < SRR4302532.3832438/94‑1 (MQ=60)
CCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGC < SRR4302532.2785041/94‑1 (MQ=60)
CCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGC < SRR4302532.771968/94‑1 (MQ=60)
CAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCG < SRR4302532.691550/94‑1 (MQ=60)
CAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCG > SRR4302532.2757735/1‑94 (MQ=60)
CAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCG < SRR4302532.1463737/94‑1 (MQ=60)
AGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑G‑AAAAA‑CTTCTCGCCCCTGCTCAAGCGCCCCACGTGCTGTCACCAGCGA > SRR4302532.573677/1‑94 (MQ=60)
AGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGA > SRR4302532.951177/1‑94 (MQ=60)
AGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGA > SRR4302532.573674/1‑94 (MQ=60)
GCCCATCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACT < SRR4302532.2206004/94‑1 (MQ=60)
CCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTA > SRR4302532.6147027/1‑94 (MQ=60)
CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC < SRR4302532.368669/94‑1 (MQ=60)
CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC < SRR4302532.5912150/94‑1 (MQ=60)
CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC > SRR4302532.3085766/1‑94 (MQ=60)
CCTTCGCTTCCCGGATTCCATATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCACACAACGTGCTGGCACCATCGAACCtctta > SRR4302532.6219131/1‑89 (MQ=60)
CTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACG < SRR4302532.3235967/94‑1 (MQ=60)
CTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACG < SRR4302532.5474321/94‑1 (MQ=60)
TCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCA < SRR4302532.4517930/94‑1 (MQ=60)
GCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAA < SRR4302532.896523/94‑1 (MQ=60)
GCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAA > SRR4302532.87998/1‑94 (MQ=60)
GCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAA > SRR4302532.410348/1‑94 (MQ=60)
CTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAC‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG < SRR4302532.2616007/94‑1 (MQ=60)
CTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG > SRR4302532.4245927/1‑94 (MQ=60)
CTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG > SRR4302532.5929636/1‑94 (MQ=60)
CTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG < SRR4302532.4182935/94‑1 (MQ=60)
TCCCTGATTCCCTAGTGGTCCTGGCAA‑G‑G‑AAAAACCTTCTCGCCCCCGATCAAGCGCACGACGTACGGTCACCAGCGAACCACTACGCAAAGCC < SRR4302532.3416190/94‑1 (MQ=46)
CCCGGATTCCCTATTGGACCTGGCAA‑GTC‑AAAAT‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCG < SRR4302532.6316763/94‑1 (MQ=60)
CCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGC > SRR4302532.842955/1‑94 (MQ=60)
CCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGC > SRR4302532.576585/1‑94 (MQ=60)
CGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCT > SRR4302532.3862273/1‑94 (MQ=60)
GGAGTCCCTATTGGACCGGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT > SRR4302532.5675537/1‑94 (MQ=60)
ATTCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCC > SRR4302532.978828/1‑94 (MQ=60)
TCCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCAC > SRR4302532.2775232/1‑94 (MQ=60)
CCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACC > SRR4302532.1861340/1‑94 (MQ=60)
CCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACC > SRR4302532.5937671/1‑94 (MQ=60)
CCCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACC < SRR4302532.4403836/94‑1 (MQ=60)
CCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCA > SRR4302532.4950831/1‑94 (MQ=60)
CCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCA > SRR4302532.2516940/1‑94 (MQ=60)
CCTATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCA > SRR4302532.2768127/1‑94 (MQ=60)
TATTGGACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCAGCTTCCACCACC > SRR4302532.4075823/1‑94 (MQ=60)
GACCTGGCAA‑G‑GCAAAAC‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTAC < SRR4302532.1280676/94‑1 (MQ=60)
GACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTAC > SRR4302532.47896/1‑94 (MQ=60)
GACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTAC < SRR4302532.653701/94‑1 (MQ=60)
ACCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACA > SRR4302532.5091738/1‑94 (MQ=60)
CCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAC > SRR4302532.5363961/1‑94 (MQ=60)
CCTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAC < SRR4302532.4398857/94‑1 (MQ=60)
CTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACC > SRR4302532.2904072/1‑94 (MQ=60)
CTGGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACAACTACGCAAAGCCGCTTCCACCACCAGTACACC > SRR4302532.1723589/1‑94 (MQ=60)
GGCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT < SRR4302532.5906831/94‑1 (MQ=60)
GCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTT < SRR4302532.2117097/94‑1 (MQ=60)
GCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTT < SRR4302532.1974454/94‑1 (MQ=60)
GCAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTT < SRR4302532.5127706/94‑1 (MQ=60)
CAA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTA < SRR4302532.6257607/94‑1 (MQ=60)
AA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC > SRR4302532.3680094/1‑94 (MQ=60)
AA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC < SRR4302532.3004883/94‑1 (MQ=60)
AA‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACCACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC < SRR4302532.4109075/94‑1 (MQ=60)
A‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACT > SRR4302532.4944971/1‑94 (MQ=60)
A‑G‑GCAAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACT > SRR4302532.210803/1‑94 (MQ=60)
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GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑AAAAA‑CTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACT > NC_000913/3430361‑3430543
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
