Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,663,106 A→G L112P (CTA→CCA)  yhiX ← putative ARAC‑type regulatory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,663,1060AG99.4% 1245.0 / ‑3.4 340L112P (CTA→CCA) yhiXputative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (171/167);  total (172/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 341 total aligned reads displayed.

TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT  >  NC_000913/3663016‑3663195
                                                                                          |                                                                                         
ttCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGc                                                                                         <  1:2401369/93‑1 (MQ=255)
 tCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCa                                                                                        >  2:5336685/1‑93 (MQ=255)
  cGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAt                                                                                       <  1:2770376/93‑1 (MQ=255)
    gTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAttt                                                                                     <  1:4938474/93‑1 (MQ=255)
    gTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAttt                                                                                     >  2:6046937/1‑93 (MQ=255)
     ttGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTc                                                                                    <  1:4641234/93‑1 (MQ=255)
     ttGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTc                                                                                    <  1:572329/93‑1 (MQ=255)
      tGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCt                                                                                   <  1:886256/93‑1 (MQ=255)
       gTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTg                                                                                  >  1:1183894/1‑93 (MQ=255)
       gTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTg                                                                                  >  1:721946/1‑93 (MQ=255)
        tAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGc                                                                                 >  2:3605966/1‑93 (MQ=255)
        tAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGc                                                                                 >  2:3070899/1‑93 (MQ=255)
        tAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGc                                                                                 >  2:2841116/1‑93 (MQ=255)
         aaaaCGTTCAGAAGCAGCGTTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCa                                                                                <  1:2454573/93‑1 (MQ=255)
          aaaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAt                                                                               >  2:3811429/1‑93 (MQ=255)
           aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATa                                                                              >  1:1851293/1‑93 (MQ=255)
           aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATa                                                                              <  1:2237878/93‑1 (MQ=255)
            aCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAg                                                                             <  2:1836222/93‑1 (MQ=255)
               ttCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGa                                                                          <  2:3037300/93‑1 (MQ=255)
                  aGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGa                                                                       <  1:3840193/93‑1 (MQ=255)
                   gAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAt                                                                      >  2:1430441/1‑93 (MQ=255)
                      gcagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCt                                                                   <  1:3042078/93‑1 (MQ=255)
                      gcagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCt                                                                   >  2:5655577/1‑93 (MQ=255)
                        agcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTa                                                                 <  1:3537268/93‑1 (MQ=255)
                         gcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAt                                                                >  1:4248345/1‑93 (MQ=255)
                          cGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAtt                                                               <  2:765974/93‑1 (MQ=255)
                           ggTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTc                                                              <  2:130908/93‑1 (MQ=255)
                           ggTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTc                                                              <  2:5413212/93‑1 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             <  2:2045204/93‑1 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  1:4880036/1‑93 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  2:1142408/1‑93 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  1:140555/1‑93 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGACTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  1:370682/1‑93 (MQ=255)
                              ataAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGc                                                           <  2:2674231/93‑1 (MQ=255)
                                aaaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGa                                                         <  2:4666074/93‑1 (MQ=255)
                                 aaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAt                                                        >  1:2565581/1‑93 (MQ=255)
                                 aaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAt                                                        >  1:1033252/1‑93 (MQ=255)
                                  aGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATa                                                       <  1:5663806/93‑1 (MQ=255)
                                   gTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAg                                                      <  2:631305/93‑1 (MQ=255)
                                    tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt                                                     <  1:3347232/93‑1 (MQ=255)
                                    tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt                                                     <  2:5532512/93‑1 (MQ=255)
                                    tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt                                                     >  1:4482194/1‑93 (MQ=255)
                                     gCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGtt                                                    <  1:3868207/93‑1 (MQ=255)
                                     gCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGtt                                                    >  2:1087736/1‑93 (MQ=255)
                                      gtCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTg                                                   <  2:2766758/92‑1 (MQ=255)
                                      cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTg                                                   >  2:3147678/1‑93 (MQ=255)
                                      cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTg                                                   >  2:4948140/1‑93 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  >  2:5266975/1‑93 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  >  2:2312763/1‑93 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  <  1:4352363/93‑1 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  <  1:1816987/93‑1 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  <  1:6065919/93‑1 (MQ=255)
                                           ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCaa                                              <  1:4125956/93‑1 (MQ=255)
                                            cTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCGGCGATAGTTGCGCAAc                                             >  2:5455726/1‑93 (MQ=255)
                                             tCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAGGATTCTTATTCTGCGATAGTTGCGCAACt                                            >  2:190193/1‑93 (MQ=255)
                                             tCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACt                                            <  2:2164279/93‑1 (MQ=255)
                                                 gAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCt                                        <  2:249301/93‑1 (MQ=255)
                                                 aaaaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCt                                        <  1:4979405/92‑1 (MQ=255)
                                                      aCAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGaaaa                                   >  2:1612382/1‑93 (MQ=255)
                                                       cAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGaaaaa                                  >  1:3451962/1‑93 (MQ=255)
                                                        aGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAc                                 >  2:5792676/1‑93 (MQ=255)
                                                         gATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACa                                >  1:5824213/1‑93 (MQ=255)
                                                          aTAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAg                               <  1:2728612/93‑1 (MQ=255)
                                                            aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa                             <  2:1507432/93‑1 (MQ=255)
                                                            aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa                             >  1:2134911/1‑93 (MQ=255)
                                                              caacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAat                           >  2:4237932/1‑93 (MQ=255)
                                                               aacGCAAAGATTAATGCTCTTTTACGAGGCATTACTGCTTAGCGAAGATTCTTATACTGCGATAGTTGCGCTACTTCCTGCAAAACAGGAata                          <  1:5486603/93‑1 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      >  2:2367526/1‑93 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      >  1:1265558/1‑93 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      <  2:2554804/93‑1 (MQ=255)
                                                                    aaaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATctct                     >  1:6034955/1‑93 (MQ=255)
                                                                     aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta                    >  1:3641435/1‑93 (MQ=255)
                                                                     aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCCGAAAAACAGGAATATCTcta                    <  2:899061/93‑1 (MQ=255)
                                                                      aGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctac                   <  1:398496/93‑1 (MQ=255)
                                                                        aTTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctacta                 >  2:3982193/1‑93 (MQ=255)
                                                                         ttAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCtactac                <  1:4729186/93‑1 (MQ=255)
                                                                         ttAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCtactac                <  2:4542913/93‑1 (MQ=255)
                                                                           aaTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACATGAATATCTCTACTACAg              >  1:1768703/1‑93 (MQ=255)
                                                                            aTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGt             <  2:2438822/93‑1 (MQ=255)
                                                                              gCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtga           >  2:5235139/1‑93 (MQ=255)
                                                                              gCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtga           >  1:5917274/1‑93 (MQ=255)
                                                                              gCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtga           <  2:4276605/93‑1 (MQ=255)
                                                                               ctctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat          <  2:26248/93‑1 (MQ=255)
                                                                               ctctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat          <  1:1553422/93‑1 (MQ=255)
                                                                               ctctTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat          <  2:5090666/93‑1 (MQ=255)
                                                                                tctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatg         <  1:5089185/93‑1 (MQ=255)
                                                                                tctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatg         >  1:5251061/1‑93 (MQ=255)
                                                                                tctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAGCTCTACTACAGtgatg         >  1:5160389/1‑93 (MQ=255)
                                                                                 ctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatga        <  2:4408494/93‑1 (MQ=255)
                                                                                 ctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatga        >  2:2216769/1‑93 (MQ=255)
                                                                                 ctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatga        >  2:4085859/1‑93 (MQ=255)
                                                                                  ttttATGTGGCATTTCTGCATATTGAAGATTCTTATTCTGCTATAGTTGCGCAATTTCTTGTTATTTAGGAATATTTCTACTACATttatgtt       >  1:5646798/1‑91 (MQ=255)
                                                                                  ttttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGaa       >  1:4062433/1‑93 (MQ=255)
                                                                                   tttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGCAAAACAGGAATATCTCTACTACAGTGATGAAc      >  2:3332457/1‑93 (MQ=255)
                                                                                   tttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAAc      >  1:5366497/1‑93 (MQ=255)
                                                                                    ttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACg     <  2:5906915/93‑1 (MQ=255)
                                                                                     tACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGa    <  2:5873555/93‑1 (MQ=255)
                                                                                     tACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGa    <  2:4830436/93‑1 (MQ=255)
                                                                                      aCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAg   >  2:342552/1‑93 (MQ=255)
                                                                                       cGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGt  <  1:3235163/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT  >  NC_000913/3663016‑3663195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATG  >  NC_000913/3663013‑3663199
                                                                                             |                                                                                             
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTG                                                                                               >  SRR4302532.909319/1‑94 (MQ=60)
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTG                                                                                               >  SRR4302532.5243276/1‑94 (MQ=60)
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTG                                                                                               <  SRR4302532.1263209/94‑1 (MQ=60)
 TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG                                                                                              >  SRR4302532.1637620/1‑94 (MQ=60)
 TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG                                                                                              >  SRR4302532.3746060/1‑94 (MQ=60)
 TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG                                                                                              <  SRR4302532.4848310/94‑1 (MQ=60)
 TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG                                                                                              <  SRR4302532.3026152/94‑1 (MQ=60)
 TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG                                                                                              >  SRR4302532.3274938/1‑94 (MQ=60)
 TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG                                                                                              <  SRR4302532.4751749/94‑1 (MQ=60)
 TGTTCGGTTGGAAAACGTTCAGAAGCAGCGGGATAAAGTGCTCATCCTCAAGAAAAACAGATTACAACGCAAAGATTAATGCTCTTTTACGTGG                                                                                              >  SRR4302532.4582181/1‑94 (MQ=60)
   TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCA                                                                                            <  SRR4302532.2481310/94‑1 (MQ=60)
     CGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATT                                                                                          <  SRR4302532.2863397/94‑1 (MQ=60)
     CGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATT                                                                                          <  SRR4302532.5749372/94‑1 (MQ=60)
     CGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATT                                                                                          >  SRR4302532.2266541/1‑94 (MQ=60)
      GGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTT                                                                                         >  SRR4302532.3995263/1‑94 (MQ=60)
      GGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTT                                                                                         <  SRR4302532.2135083/94‑1 (MQ=60)
       GTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTC                                                                                        <  SRR4302532.4482772/94‑1 (MQ=60)
       GTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTC                                                                                        <  SRR4302532.3456073/94‑1 (MQ=60)
       GTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTC                                                                                        >  SRR4302532.5550346/1‑94 (MQ=60)
       GTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTC                                                                                        >  SRR4302532.5268460/1‑94 (MQ=60)
       GTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTC                                                                                        <  SRR4302532.5108007/94‑1 (MQ=60)
        TTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCT                                                                                       <  SRR4302532.592297/94‑1 (MQ=60)
        TTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCT                                                                                       <  SRR4302532.4799481/94‑1 (MQ=60)
         TGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTG                                                                                      <  SRR4302532.916561/94‑1 (MQ=60)
         TGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTG                                                                                      >  SRR4302532.1223443/1‑94 (MQ=60)
         TGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTG                                                                                      >  SRR4302532.746580/1‑94 (MQ=60)
         TGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTG                                                                                      <  SRR4302532.48398/94‑1 (MQ=60)
            AAAACGTTCAGAAGCAGCGTTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAT                                                                                   <  SRR4302532.2536212/94‑1 (MQ=60)
            AAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAT                                                                                   >  SRR4302532.2844999/1‑94 (MQ=60)
            AAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAT                                                                                   <  SRR4302532.1827896/94‑1 (MQ=60)
            AAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAT                                                                                   <  SRR4302532.4227041/94‑1 (MQ=60)
            AAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAT                                                                                   <  SRR4302532.2536213/94‑1 (MQ=60)
             AAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATA                                                                                  >  SRR4302532.1912725/1‑94 (MQ=60)
              AACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAG                                                                                 <  SRR4302532.3275109/94‑1 (MQ=60)
              AACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAG                                                                                 <  SRR4302532.3958226/94‑1 (MQ=60)
              AACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAG                                                                                 <  SRR4302532.2312141/94‑1 (MQ=60)
               ACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGC                                                                                <  SRR4302532.977348/94‑1 (MQ=60)
               ACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGC                                                                                <  SRR4302532.2313034/94‑1 (MQ=60)
                CGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG                                                                               <  SRR4302532.3602537/94‑1 (MQ=60)
                CGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG                                                                               <  SRR4302532.4977350/94‑1 (MQ=60)
                CGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG                                                                               >  SRR4302532.6326949/1‑94 (MQ=60)
                CGTACAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG                                                                               <  SRR4302532.3954820/94‑1 (MQ=60)
                 GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGA                                                                              >  SRR4302532.6314340/1‑94 (MQ=60)
                 GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGA                                                                              >  SRR4302532.5121182/1‑94 (MQ=60)
                 GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGA                                                                              >  SRR4302532.4631137/1‑94 (MQ=60)
                   TCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAG                                                                            <  SRR4302532.126749/94‑1 (MQ=60)
                     AGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAT                                                                          >  SRR4302532.1895547/1‑94 (MQ=60)
                     AGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAT                                                                          <  SRR4302532.3969847/94‑1 (MQ=60)
                      GAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATT                                                                         >  SRR4302532.1237898/1‑94 (MQ=60)
                       AAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGAGAAGATGC                                                                        <  SRR4302532.3986764/94‑1 (MQ=60)
                         GCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTT                                                                      <  SRR4302532.3142463/94‑1 (MQ=60)
                          CAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTA                                                                     <  SRR4302532.4651865/94‑1 (MQ=60)
                          CAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTA                                                                     <  SRR4302532.5217786/94‑1 (MQ=60)
                           AGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAT                                                                    <  SRR4302532.3655618/94‑1 (MQ=60)
                           AGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAT                                                                    >  SRR4302532.4391086/1‑94 (MQ=60)
                            GCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATT                                                                   >  SRR4302532.1403275/1‑94 (MQ=60)
                            GCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATT                                                                   <  SRR4302532.6010992/94‑1 (MQ=60)
                             CGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTC                                                                  <  SRR4302532.52550/94‑1 (MQ=60)
                             CGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTC                                                                  >  SRR4302532.277656/1‑94 (MQ=60)
                             CGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTC                                                                  <  SRR4302532.188612/94‑1 (MQ=60)
                             CGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTC                                                                  >  SRR4302532.5857021/1‑94 (MQ=60)
                              GGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCT                                                                 <  SRR4302532.5868842/94‑1 (MQ=60)
                              GGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCT                                                                 >  SRR4302532.5047835/1‑94 (MQ=60)
                              GGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCT                                                                 >  SRR4302532.145298/1‑94 (MQ=60)
                              GGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGACTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCT                                                                 >  SRR4302532.383562/1‑94 (MQ=60)
                               GTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTG                                                                <  SRR4302532.2769789/94‑1 (MQ=60)
                               GTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTG                                                                >  SRR4302532.5897471/1‑94 (MQ=60)
                               GTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTG                                                                >  SRR4302532.6033017/1‑94 (MQ=60)
                               GTATAAAATGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTATTATTCTG                                                                <  SRR4302532.1813266/94‑1 (MQ=60)
                                   AAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAT                                                            >  SRR4302532.2651212/1‑94 (MQ=60)
                                   AAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAT                                                            >  SRR4302532.1068144/1‑94 (MQ=60)
                                   AAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAT                                                            <  SRR4302532.1187259/94‑1 (MQ=60)
                                    AAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGTATTTCTGCATAGCGAAGATTCTTATGCTGCGATA                                                           >  SRR4302532.5849188/1‑94 (MQ=60)
                                     AGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAG                                                          <  SRR4302532.5861209/94‑1 (MQ=60)
                                     AGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAG                                                          <  SRR4302532.6246127/94‑1 (MQ=60)
                                      GTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGT                                                         >  SRR4302532.5562777/1‑94 (MQ=60)
                                      GTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGT                                                         >  SRR4302532.4635130/1‑94 (MQ=60)
                                       TGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTT                                                        <  SRR4302532.3458978/94‑1 (MQ=60)
                                        GCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTG                                                       <  SRR4302532.6141272/94‑1 (MQ=60)
                                        GCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTG                                                       <  SRR4302532.3998746/94‑1 (MQ=60)
                                         CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTGATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGC                                                      <  SRR4302532.803965/94‑1 (MQ=60)
                                         CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGC                                                      >  SRR4302532.5703970/1‑94 (MQ=60)
                                         CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGC                                                      <  SRR4302532.5328381/94‑1 (MQ=60)
                                         CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGC                                                      >  SRR4302532.734768/1‑94 (MQ=60)
                                         CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGC                                                      <  SRR4302532.803966/94‑1 (MQ=60)
                                          TCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCG                                                     <  SRR4302532.4499565/94‑1 (MQ=60)
                                          TCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCG                                                     <  SRR4302532.1877554/94‑1 (MQ=60)
                                          TCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCG                                                     <  SRR4302532.6275414/94‑1 (MQ=60)
                                          TCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCG                                                     <  SRR4302532.4057530/94‑1 (MQ=60)
                                           CATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGC                                                    >  SRR4302532.4136809/1‑94 (MQ=60)
                                            ATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCA                                                   >  SRR4302532.4704428/1‑94 (MQ=60)
                                            ATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCA                                                   <  SRR4302532.6057335/94‑1 (MQ=60)
                                             TCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAA                                                  >  SRR4302532.2618310/1‑94 (MQ=60)
                                              CCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAAC                                                 >  SRR4302532.986922/1‑94 (MQ=60)
                                              CCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAAC                                                 <  SRR4302532.4264409/94‑1 (MQ=60)
                                              CCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAAC                                                 >  SRR4302532.3829177/1‑94 (MQ=60)
                                               CTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACT                                                <  SRR4302532.5653654/94‑1 (MQ=60)
                                               CTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACT                                                <  SRR4302532.1403393/94‑1 (MQ=60)
                                                TCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTT                                               <  SRR4302532.3816524/94‑1 (MQ=60)
                                                 CAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTC                                              >  SRR4302532.3586717/1‑94 (MQ=60)
                                                   AGAAAAACATATAACAACGCAAAGATTAATGCTCTTTTACGTGGCTTTACTGCATAGCGAAGATTCTTATTCTGCAATAGTTGCTCAACTTCCT                                            <  SRR4302532.4537581/94‑1 (MQ=60)
                                                   AGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCT                                            >  SRR4302532.1834356/1‑94 (MQ=60)
                                                   AGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCT                                            >  SRR4302532.3665692/1‑94 (MQ=60)
                                                    AAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTG                                           <  SRR4302532.5150096/94‑1 (MQ=60)
                                                     AAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGA                                          <  SRR4302532.5108499/94‑1 (MQ=60)
                                                     AAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGA                                          >  SRR4302532.2374147/1‑94 (MQ=60)
                                                     AAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGA                                          >  SRR4302532.2200353/1‑94 (MQ=60)
                                                       AAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAA                                        <  SRR4302532.3366564/94‑1 (MQ=60)
                                                        AACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAA                                       >  SRR4302532.1025035/1‑94 (MQ=60)
                                                        AACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAA                                       <  SRR4302532.3160625/94‑1 (MQ=60)
                                                         ACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAA                                      <  SRR4302532.4214200/94‑1 (MQ=60)
                                                         ACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAA                                      >  SRR4302532.3567576/1‑94 (MQ=60)
                                                           AGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACA                                    >  SRR4302532.2989800/1‑94 (MQ=60)
                                                           AGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACA                                    >  SRR4302532.6026457/1‑94 (MQ=60)
                                                            GATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAG                                   <  SRR4302532.2983997/94‑1 (MQ=60)
                                                            GATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAG                                   >  SRR4302532.5019991/1‑94 (MQ=60)
                                                            GATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAG                                   <  SRR4302532.3506777/94‑1 (MQ=60)
                                                             ATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG                                  >  SRR4302532.1202661/1‑94 (MQ=60)
                                                             ATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG                                  <  SRR4302532.2257983/94‑1 (MQ=60)
                                                             ATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG                                  <  SRR4302532.2820359/94‑1 (MQ=60)
                                                             ATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG                                  <  SRR4302532.4899976/94‑1 (MQ=60)
                                                              TAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGA                                 >  SRR4302532.2206217/1‑94 (MQ=60)
                                                               AACAACGCAAAGATTAATGATCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAA                                >  SRR4302532.5456686/1‑94 (MQ=60)
                                                                  AACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAT                             >  SRR4302532.2172254/1‑94 (MQ=60)
                                                                  AACGCAAAGATTAATGCTCTTTTACGAGGCATTACTGCTTAGCGAAGATTCTTATACTGCGATAGTTGCGCTACTTCCTGCAAAACAGGAATAT                             <  SRR4302532.5676838/94‑1 (MQ=60)
                                                                    CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT                           >  SRR4302532.1363483/1‑94 (MQ=60)
                                                                     GCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTC                          >  SRR4302532.2479843/1‑94 (MQ=60)
                                                                     GCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTC                          <  SRR4302532.6254581/94‑1 (MQ=60)
                                                                     GCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTC                          >  SRR4302532.5098238/1‑94 (MQ=60)
                                                                     GCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTC                          >  SRR4302532.1307891/1‑94 (MQ=60)
                                                                     GCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTC                          <  SRR4302532.3969491/94‑1 (MQ=60)
                                                                      CAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCT                         >  SRR4302532.6243376/1‑94 (MQ=60)
                                                                       AAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTA                        >  SRR4302532.3763618/1‑94 (MQ=60)
                                                                       AAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTA                        >  SRR4302532.3763619/1‑94 (MQ=60)
                                                                         AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT                      >  SRR4302532.5950953/1‑94 (MQ=60)
                                                                         AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT                      >  SRR4302532.415727/1‑94 (MQ=60)
                                                                         AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT                      >  SRR4302532.415505/1‑94 (MQ=60)
                                                                         AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT                      >  SRR4302532.4278807/1‑94 (MQ=60)
                                                                         AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT                      <  SRR4302532.412427/94‑1 (MQ=60)
                                                                         AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT                      <  SRR4302532.412428/94‑1 (MQ=60)
                                                                          GATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTA                     >  SRR4302532.1554595/1‑94 (MQ=60)
                                                                          GATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTA                     >  SRR4302532.3664303/1‑94 (MQ=60)
                                                                           ATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTAC                    >  SRR4302532.3540471/1‑94 (MQ=60)
                                                                           ATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTAC                    <  SRR4302532.5077634/94‑1 (MQ=60)
                                                                            TTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACA                   <  SRR4302532.4890602/94‑1 (MQ=60)
                                                                             TAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACATGAATATCTCTACTACAG                  >  SRR4302532.1827980/1‑94 (MQ=60)
                                                                             TAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAG                  <  SRR4302532.2485364/94‑1 (MQ=60)
                                                                              AATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGGTTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGT                 <  SRR4302532.4513315/94‑1 (MQ=60)
                                                                              AATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGT                 >  SRR4302532.4311177/1‑94 (MQ=60)
                                                                              AATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGT                 <  SRR4302532.3461366/94‑1 (MQ=60)
                                                                               ATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTG                >  SRR4302532.6082422/1‑94 (MQ=60)
                                                                               ATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTG                <  SRR4302532.28358/94‑1 (MQ=60)
                                                                                TGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGA               >  SRR4302532.6122188/1‑94 (MQ=60)
                                                                                 GCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGAT              >  SRR4302532.4383450/1‑94 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             >  SRR4302532.5337975/1‑94 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             >  SRR4302532.2513230/1‑94 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             <  SRR4302532.1605947/94‑1 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             >  SRR4302532.2950467/1‑94 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             >  SRR4302532.5432087/1‑94 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             >  SRR4302532.1469693/1‑94 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             <  SRR4302532.5910013/94‑1 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             <  SRR4302532.6161952/94‑1 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG             >  SRR4302532.5337976/1‑94 (MQ=60)
                                                                                  CTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAGCTCTACTACAGTGATG             >  SRR4302532.5337974/1‑94 (MQ=60)
                                                                                   TCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGA            <  SRR4302532.5264171/94‑1 (MQ=60)
                                                                                   TCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGA            >  SRR4302532.1833651/1‑94 (MQ=60)
                                                                                    CTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAA           >  SRR4302532.4198957/1‑94 (MQ=60)
                                                                                    CTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAA           <  SRR4302532.5175525/94‑1 (MQ=60)
                                                                                    CTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAA           >  SRR4302532.5406778/1‑94 (MQ=60)
                                                                                    CTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAA           >  SRR4302532.464579/1‑94 (MQ=60)
                                                                                     TTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAAC          >  SRR4302532.5552502/1‑94 (MQ=60)
                                                                                     TTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAAC          <  SRR4302532.2752021/94‑1 (MQ=60)
                                                                                       TTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGA        <  SRR4302532.489178/94‑1 (MQ=60)
                                                                                         ACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT      <  SRR4302532.4404619/94‑1 (MQ=60)
                                                                                         ACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT      <  SRR4302532.3806777/94‑1 (MQ=60)
                                                                                         ACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT      <  SRR4302532.18222/94‑1 (MQ=60)
                                                                                          CGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTA     >  SRR4302532.3258344/1‑94 (MQ=60)
                                                                                          CGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTA     >  SRR4302532.1067982/1‑94 (MQ=60)
                                                                                          CGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTA     <  SRR4302532.3342554/94‑1 (MQ=60)
                                                                                          CGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTA     <  SRR4302532.5751853/94‑1 (MQ=60)
                                                                                          CGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTA     >  SRR4302532.5826056/1‑94 (MQ=60)
                                                                                          CGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTA     >  SRR4302532.2461692/1‑94 (MQ=60)
                                                                                           GTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAA    <  SRR4302532.460004/94‑1 (MQ=60)
                                                                                           GTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAA    >  SRR4302532.1985187/1‑94 (MQ=60)
                                                                                           GTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAA    <  SRR4302532.606778/94‑1 (MQ=60)
                                                                                            TGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAAT   >  SRR4302532.6250115/1‑94 (MQ=60)
                                                                                            TGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAAT   <  SRR4302532.3908074/94‑1 (MQ=60)
                                                                                             GGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATG  <  SRR4302532.4255780/94‑1 (MQ=60)
                                                                                             |                                                                                             
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATG  >  NC_000913/3663013‑3663199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: