Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,663,106 |
A→G |
L112P (CTA→CCA) |
yhiX ← |
putative ARAC‑type regulatory protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,663,106 | 0 | A | G | 99.7%
| 1229.4
/ ‑6.6
| 328 | L112P (CTA→CCA) | yhiX | putative ARAC‑type regulatory protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (166/161); minor base T (0/1); total (166/162) |
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 328 total aligned reads displayed.
TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT > NC_000913/3663016‑3663195
|
ttCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGc > 2:1272030/1‑93 (MQ=255)
cGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAt < 2:1208311/93‑1 (MQ=255)
gTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAttt > 1:770388/1‑93 (MQ=255)
gTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAttt > 2:6014075/1‑93 (MQ=255)
ttGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTc < 1:2439431/93‑1 (MQ=255)
tGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCt > 1:4163454/1‑93 (MQ=255)
gTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTg < 2:5170673/93‑1 (MQ=255)
gTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTg > 1:2079510/1‑93 (MQ=255)
tAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGc > 2:3661998/1‑93 (MQ=255)
aaaaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCa < 2:785633/93‑1 (MQ=255)
aaaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAt > 2:6123784/1‑93 (MQ=255)
aaaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAt > 1:1741912/1‑93 (MQ=255)
aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCCTTTCTGCATa < 1:4071710/93‑1 (MQ=255)
aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATa < 2:5080417/93‑1 (MQ=255)
aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATa > 1:3762470/1‑93 (MQ=255)
cGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGc < 1:2126805/93‑1 (MQ=255)
cGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGc < 2:5011429/93‑1 (MQ=255)
gTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCg > 1:6598727/1‑93 (MQ=255)
gTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTATGCATAGCg < 1:5270838/93‑1 (MQ=255)
ttCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGa > 2:27235/1‑93 (MQ=255)
ttCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGa > 1:5428771/1‑93 (MQ=255)
tCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGaa > 1:4593028/1‑93 (MQ=255)
tCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGaa < 2:718156/93‑1 (MQ=255)
aGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGa < 1:1552569/93‑1 (MQ=255)
aaGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAtt < 1:6119863/93‑1 (MQ=255)
cagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCtt < 1:151093/93‑1 (MQ=255)
cagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCtt < 1:481339/93‑1 (MQ=255)
cagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCtt > 1:5013016/1‑93 (MQ=255)
gcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAt > 2:3059239/1‑93 (MQ=255)
gcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAt > 2:3169917/1‑93 (MQ=255)
gcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAt > 2:3781085/1‑93 (MQ=255)
cGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAtt > 1:2973581/1‑93 (MQ=255)
gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt < 1:2336431/93‑1 (MQ=255)
gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt > 1:1691277/1‑93 (MQ=255)
taAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCg > 2:1481772/1‑93 (MQ=255)
taAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCg > 2:5846410/1‑93 (MQ=255)
aaaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGa > 1:4103626/1‑93 (MQ=255)
aaaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGa < 2:343111/93‑1 (MQ=255)
aaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAt > 1:719569/1‑93 (MQ=255)
aaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAt < 2:5663101/93‑1 (MQ=255)
tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt > 2:3321072/1‑93 (MQ=255)
tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt > 1:5651768/1‑93 (MQ=255)
gCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGtt < 1:110661/93‑1 (MQ=255)
gCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGtt < 2:2423543/93‑1 (MQ=255)
tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc > 2:467234/1‑93 (MQ=255)
tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc > 2:5309618/1‑93 (MQ=255)
aTCCTCAAGAAAAACAGATGACAACGCAAAGATTAATGCTCTTTTGCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgcgc < 2:6293898/93‑1 (MQ=255)
aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgcgc > 1:3977619/1‑93 (MQ=255)
tCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCa > 1:2378873/1‑93 (MQ=255)
tCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCa > 1:3180034/1‑93 (MQ=255)
ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCaa < 2:432741/93‑1 (MQ=255)
ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCaa > 1:3449122/1‑93 (MQ=255)
cTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAAc < 2:1054417/93‑1 (MQ=255)
cAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACtt > 1:2016548/1‑93 (MQ=255)
aaGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTc > 2:4467678/1‑93 (MQ=255)
aaGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTc < 2:4214542/93‑1 (MQ=255)
gAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCt > 1:4540814/1‑93 (MQ=255)
aaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGa > 1:6311426/1‑93 (MQ=255)
aaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGa > 1:4729621/1‑93 (MQ=255)
aGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAc < 1:1237455/93‑1 (MQ=255)
aGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAc > 2:1626567/1‑93 (MQ=255)
aGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAc > 1:3613659/1‑93 (MQ=255)
gATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACa < 1:2047251/93‑1 (MQ=255)
aTAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAg < 1:4654691/93‑1 (MQ=255)
aTAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAg < 2:3586213/93‑1 (MQ=255)
aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa > 2:1406394/1‑93 (MQ=255)
aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa > 1:5301193/1‑93 (MQ=255)
aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa > 1:896572/1‑93 (MQ=255)
acaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGaa < 2:3192689/93‑1 (MQ=255)
cGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtc > 1:1377574/1‑93 (MQ=255)
cGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtc < 1:1934152/93‑1 (MQ=255)
cGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtc < 1:6266471/93‑1 (MQ=255)
gCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtct > 2:2868115/1‑93 (MQ=255)
gCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtct > 1:3873838/1‑93 (MQ=255)
gaaaGATTAATGCTCTTTTACGTTGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctt < 1:4499971/92‑2 (MQ=255)
cAAAGATTAATTCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc < 2:1741521/93‑1 (MQ=255)
cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc < 1:5790695/93‑1 (MQ=255)
cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc < 2:3234022/93‑1 (MQ=255)
cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc < 2:5556809/93‑1 (MQ=255)
aaaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATctct > 2:11547/1‑93 (MQ=255)
aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta > 2:5950394/1‑93 (MQ=255)
aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta > 1:2603022/1‑93 (MQ=255)
aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta < 1:4274802/93‑1 (MQ=255)
aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta > 2:3734402/1‑93 (MQ=255)
aGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctac < 2:2167653/93‑1 (MQ=255)
aGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctac > 1:3360719/1‑93 (MQ=255)
aTTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctacta > 2:156511/1‑93 (MQ=255)
tAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACa < 2:1911432/93‑1 (MQ=255)
aaTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAg > 2:659190/1‑93 (MQ=255)
aTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGt < 2:2081746/93‑1 (MQ=255)
aTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGt < 1:5201729/93‑1 (MQ=255)
tGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtg < 1:3704068/93‑1 (MQ=255)
ctctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat < 2:3988517/93‑1 (MQ=255)
ctctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat < 2:4754428/93‑1 (MQ=255)
ttttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGaa > 2:5729089/1‑93 (MQ=255)
tttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAAc < 2:2557758/93‑1 (MQ=255)
tACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGa > 2:2619601/1‑93 (MQ=255)
aCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAg > 2:4875485/1‑93 (MQ=255)
aCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAg > 2:2935262/1‑93 (MQ=255)
aCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATCAACGAg < 1:5521956/93‑1 (MQ=255)
|
TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT > NC_000913/3663016‑3663195
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATG > NC_000913/3663013‑3663199
|
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTG < SRR4302547.3703379/94‑1 (MQ=60)
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTG > SRR4302547.281405/1‑94 (MQ=60)
ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTG < SRR4302547.1978867/94‑1 (MQ=60)
TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG < SRR4302547.3896138/94‑1 (MQ=60)
TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG > SRR4302547.4153423/1‑94 (MQ=60)
TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG < SRR4302547.2144559/94‑1 (MQ=60)
TGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGG < SRR4302547.6595477/94‑1 (MQ=60)
TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCA < SRR4302547.229103/94‑1 (MQ=60)
TTCGGTTGGAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCA > SRR4302547.6675111/1‑94 (MQ=60)
TCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAT > SRR4302547.4059992/1‑94 (MQ=60)
CGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATT > SRR4302547.2746984/1‑94 (MQ=60)
GGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTT > SRR4302547.784946/1‑94 (MQ=60)
GTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTC < SRR4302547.4887049/94‑1 (MQ=60)
GTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTC > SRR4302547.5920738/1‑94 (MQ=60)
GTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTC > SRR4302547.4125678/1‑94 (MQ=60)
TTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCT > SRR4302547.4206776/1‑94 (MQ=60)
TTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCT < SRR4302547.1464632/94‑1 (MQ=60)
TTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCT > SRR4302547.4248260/1‑94 (MQ=60)
TTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCT < SRR4302547.2488770/94‑1 (MQ=60)
TTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCT < SRR4302547.772937/94‑1 (MQ=60)
TTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCACCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGCGGCATTTCT < SRR4302547.1284927/94‑1 (MQ=60)
TGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTG > SRR4302547.2120977/1‑94 (MQ=60)
TGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTG > SRR4302547.1913166/1‑94 (MQ=60)
TAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCA > SRR4302547.1210103/1‑94 (MQ=60)
TAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCA > SRR4302547.4347009/1‑94 (MQ=60)
AAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAT < SRR4302547.3831778/94‑1 (MQ=60)
AAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAT > SRR4302547.1776188/1‑94 (MQ=60)
AAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAT > SRR4302547.172954/1‑94 (MQ=60)
AAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATA > SRR4302547.3839219/1‑94 (MQ=60)
AACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCCTTTCTGCATAG < SRR4302547.4154430/94‑1 (MQ=60)
ACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGC < SRR4302547.3892486/94‑1 (MQ=60)
CGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG < SRR4302547.2169182/94‑1 (MQ=60)
CGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG < SRR4302547.3699915/94‑1 (MQ=60)
CGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG < SRR4302547.2104256/94‑1 (MQ=60)
CGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG > SRR4302547.6736093/1‑94 (MQ=60)
CGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCG > SRR4302547.2023595/1‑94 (MQ=60)
GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGA > SRR4302547.4656064/1‑94 (MQ=60)
GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGA < SRR4302547.5546374/94‑1 (MQ=60)
GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGA > SRR4302547.5541018/1‑94 (MQ=60)
GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGA > SRR4302547.5373104/1‑94 (MQ=60)
GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTATGCATAGCGA < SRR4302547.5379444/94‑1 (MQ=60)
TTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAA < SRR4302547.4292729/94‑1 (MQ=60)
TTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAA < SRR4302547.5596822/94‑1 (MQ=60)
TTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAA > SRR4302547.4688072/1‑94 (MQ=60)
TCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAG < SRR4302547.5721654/94‑1 (MQ=60)
CAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGA > SRR4302547.4371696/1‑94 (MQ=60)
AGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAT > SRR4302547.1987045/1‑94 (MQ=60)
AGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAT < SRR4302547.1583471/94‑1 (MQ=60)
AGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAT < SRR4302547.3829359/94‑1 (MQ=60)
GAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATT < SRR4302547.5036877/94‑1 (MQ=60)
AAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTC < SRR4302547.4742873/94‑1 (MQ=60)
AAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTC < SRR4302547.6246812/94‑1 (MQ=60)
GCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTT > SRR4302547.5116639/1‑94 (MQ=60)
CAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTA < SRR4302547.153845/94‑1 (MQ=60)
CAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTA < SRR4302547.490171/94‑1 (MQ=60)
AGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAT > SRR4302547.3408762/1‑94 (MQ=60)
GCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATT < SRR4302547.2082481/94‑1 (MQ=60)
GCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATT > SRR4302547.3032752/1‑94 (MQ=60)
GGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCT < SRR4302547.2147341/94‑1 (MQ=60)
GGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCT > SRR4302547.4523652/1‑94 (MQ=60)
GGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCT > SRR4302547.1724547/1‑94 (MQ=60)
GGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCT < SRR4302547.1696367/94‑1 (MQ=60)
GTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTG < SRR4302547.2383789/94‑1 (MQ=60)
GTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTG < SRR4302547.6290679/94‑1 (MQ=60)
TATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGC < SRR4302547.6098715/94‑1 (MQ=60)
TATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGC > SRR4302547.3777090/1‑94 (MQ=60)
ATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCG < SRR4302547.3954741/94‑1 (MQ=60)
ATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCG > SRR4302547.362508/1‑94 (MQ=60)
TAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGA > SRR4302547.4187051/1‑94 (MQ=60)
TAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGA > SRR4302547.1571147/1‑94 (MQ=60)
TAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGA > SRR4302547.344149/1‑94 (MQ=60)
TAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGA > SRR4302547.680297/1‑94 (MQ=60)
AAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAT < SRR4302547.6773509/94‑1 (MQ=60)
AAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAT > SRR4302547.2591136/1‑94 (MQ=60)
AAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAT < SRR4302547.5128523/94‑1 (MQ=60)
AAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAT < SRR4302547.5210407/94‑1 (MQ=60)
AAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAT > SRR4302547.732942/1‑94 (MQ=60)
AAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATA < SRR4302547.4776387/94‑1 (MQ=60)
GTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGT > SRR4302547.5768442/1‑94 (MQ=60)
GCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTG > SRR4302547.937882/1‑94 (MQ=60)
GCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTG < SRR4302547.112680/94‑1 (MQ=60)
CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGC > SRR4302547.3930105/1‑94 (MQ=60)
CTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGC < SRR4302547.1765086/94‑1 (MQ=60)
TCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCG > SRR4302547.3201557/1‑94 (MQ=60)
TCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCG < SRR4302547.5001719/94‑1 (MQ=60)
CATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTTCGATAGTTGCGC > SRR4302547.3601673/1‑94 (MQ=60)
CATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGC > SRR4302547.4058501/1‑94 (MQ=60)
ATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCA > SRR4302547.2427069/1‑94 (MQ=60)
ATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCA > SRR4302547.3243416/1‑94 (MQ=60)
TCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAA > SRR4302547.3519430/1‑94 (MQ=60)
CTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACT < SRR4302547.1415313/94‑1 (MQ=60)
CTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACT < SRR4302547.537678/94‑1 (MQ=60)
TCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTT > SRR4302547.4808406/1‑94 (MQ=60)
TCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTT > SRR4302547.2056670/1‑94 (MQ=60)
TCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTT > SRR4302547.4180123/1‑94 (MQ=60)
TCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTT > SRR4302547.5760463/1‑94 (MQ=60)
TCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTT > SRR4302547.2231980/1‑94 (MQ=60)
GCAAGAAAAACAGATAACAACGCAAAGATCAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTT < SRR4302547.2066809/94‑1 (MQ=60)
CAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTC < SRR4302547.1576776/94‑1 (MQ=60)
CAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTC > SRR4302547.4732170/1‑94 (MQ=60)
CAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTC < SRR4302547.3163755/94‑1 (MQ=60)
AGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCT < SRR4302547.2488396/94‑1 (MQ=60)
AGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCT > SRR4302547.4634679/1‑94 (MQ=60)
AGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCT < SRR4302547.6411052/94‑1 (MQ=60)
AGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCT < SRR4302547.2094387/94‑1 (MQ=60)
AGAAAAACAGATAACAACGCAAAGATTAATGCTCTTGTACGTGGCAGTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTCCCT < SRR4302547.1589707/94‑1 (MQ=60)
AAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGA < SRR4302547.5401441/94‑1 (MQ=60)
AAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGA > SRR4302547.6442651/1‑94 (MQ=60)
AAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGA > SRR4302547.4827645/1‑94 (MQ=60)
AAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGA > SRR4302547.2407103/1‑94 (MQ=60)
AACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAA > SRR4302547.2134264/1‑94 (MQ=60)
AACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAA < SRR4302547.2058775/94‑1 (MQ=60)
ACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAA < SRR4302547.299505/94‑1 (MQ=60)
CAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAC > SRR4302547.3687380/1‑94 (MQ=60)
CAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAC > SRR4302547.4838334/1‑94 (MQ=60)
AGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACA < SRR4302547.1262438/94‑1 (MQ=60)
AGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACA > SRR4302547.778198/1‑94 (MQ=60)
AGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCCGCGATAGTTGCGCAACTTCCTGAAAAACA < SRR4302547.5893823/94‑1 (MQ=60)
GATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAG < SRR4302547.2088084/94‑1 (MQ=60)
ATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG < SRR4302547.4751094/94‑1 (MQ=60)
ATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG < SRR4302547.862181/94‑1 (MQ=60)
TAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGA > SRR4302547.913815/1‑94 (MQ=60)
TAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGA > SRR4302547.5410557/1‑94 (MQ=60)
TAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGA < SRR4302547.2559425/94‑1 (MQ=60)
AACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAA < SRR4302547.4438741/94‑1 (MQ=60)
ACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAAT > SRR4302547.834730/1‑94 (MQ=60)
ACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAAT < SRR4302547.3474422/94‑1 (MQ=60)
CAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATA < SRR4302547.4796950/94‑1 (MQ=60)
AACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAT > SRR4302547.4617238/1‑94 (MQ=60)
AACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAT < SRR4302547.5478052/94‑1 (MQ=60)
ACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATC > SRR4302547.1405190/1‑94 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT < SRR4302547.1238533/94‑1 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT < SRR4302547.6396636/94‑1 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT < SRR4302547.1972508/94‑1 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT > SRR4302547.3952673/1‑94 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT > SRR4302547.3817345/1‑94 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT > SRR4302547.5872172/1‑94 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT < SRR4302547.2421994/94‑1 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT < SRR4302547.156479/94‑1 (MQ=60)
CGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCT < SRR4302547.700931/94‑1 (MQ=60)
GAAAGATTAATGCTCTTTTACGTTGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTTT < SRR4302547.4592925/94‑1 (MQ=60)
CAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCT > SRR4302547.627657/1‑94 (MQ=60)
CAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCT > SRR4302547.4031857/1‑94 (MQ=60)
CAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCT < SRR4302547.4163278/94‑1 (MQ=60)
CAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCT < SRR4302547.5910474/94‑1 (MQ=60)
AAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTA < SRR4302547.4673381/94‑1 (MQ=60)
AAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTA > SRR4302547.2655484/1‑94 (MQ=60)
AAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTA < SRR4302547.6418529/94‑1 (MQ=60)
AAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTAC < SRR4302547.4362581/94‑1 (MQ=60)
AAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTAC > SRR4302547.3428933/1‑94 (MQ=60)
AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT < SRR4302547.2471586/94‑1 (MQ=60)
AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT < SRR4302547.3340541/94‑1 (MQ=60)
AGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACT < SRR4302547.1380394/94‑1 (MQ=60)
ATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTAC > SRR4302547.5621199/1‑94 (MQ=60)
TTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACA > SRR4302547.5438989/1‑94 (MQ=60)
AATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGT < SRR4302547.938533/94‑1 (MQ=60)
ATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTG < SRR4302547.5329967/94‑1 (MQ=60)
ATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTG < SRR4302547.5308765/94‑1 (MQ=60)
ATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTG > SRR4302547.328351/1‑94 (MQ=60)
TGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGA < SRR4302547.3779675/94‑1 (MQ=60)
GCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGAT > SRR4302547.2123267/1‑94 (MQ=60)
CTCCTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATG < SRR4302547.2596902/94‑1 (MQ=60)
TCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGA > SRR4302547.5180893/1‑94 (MQ=60)
CTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAA > SRR4302547.1968119/1‑94 (MQ=60)
TTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACG < SRR4302547.4132811/94‑1 (MQ=60)
TTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACG > SRR4302547.6544406/1‑94 (MQ=60)
TACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAG > SRR4302547.5994545/1‑94 (MQ=60)
TACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAG > SRR4302547.4202800/1‑94 (MQ=60)
TACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAG > SRR4302547.4617147/1‑94 (MQ=60)
ACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT < SRR4302547.2047100/94‑1 (MQ=60)
ACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATCAACGAGT < SRR4302547.5635935/94‑1 (MQ=60)
GTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAA > SRR4302547.2660210/1‑94 (MQ=60)
GTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAA < SRR4302547.4002737/94‑1 (MQ=60)
TGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAAT < SRR4302547.2286876/94‑1 (MQ=60)
TGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAAT > SRR4302547.6664448/1‑94 (MQ=60)
GGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATG > SRR4302547.1100752/1‑94 (MQ=60)
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ATGTTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATG > NC_000913/3663013‑3663199
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
